3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
4A3FC 4XLNA 1R9TC 4G7HA 1I50K 2NVTC 3HOYK 3GTLK 3S16K 5D4DA 4A3LK 2O5JA 3S14K 3PO3C 1Y1WC 1TWCK 5IYCC 1IW7A 3DXJA 3M3YC 4XSXA 5C4JC 3HOXC 2PMZD 3GTJC 4A3MC 4OIOA 5FLMC 2R92C 4C3IK 4OIQA 4LLGA 3GTQK 1TWGC 4BY7K 3S1NK 1I6VA 5C3EC 2NVYK 3I4MC 4XSZA 4A3JC 2A68A 3M4OC 5IYDC 4A3GC 4X6AC 2JA6K 3HKZD 3EQLA 3WODA 2E2JK 3HOWC 2BE5A 5M5YK 1ZYRA 5TMCA 2NVQC 4C3JK 3FKIK 3RZOC 1SFOK 1Y1VK 2WAQL 4A3EK 4C2MK 2A69A 5IP7C 4BBSK 5M3FK 4C3HC 2B63C 3GTMK 2Y0SD 2YU9K 3S17C 2JA5C 5IP9K 1TWHK 2JA7K 3GTOK 4LK1A 3PO2C 2R93K 1WCMC 4A3IC 2JA8C 3HOVC 5C4XK 3HOZK 3S2DC 2NVXC 1BDFA 4QIWD 4A3FK 1R9TK 5M5XK 2NVTK 4A3BC 4Y52K 4G7ZA 2WB1D 4AYBD 3PO3K 2A6HA 3GTPC 1TWAK 5IYCK 1Y1WK 4BXXC 3M3YK 4Y7NK 5C4JK 3HOXK 2E2IC 3GTJK 1YNNA 4A3MK 3S15C 5FLMK 5C44C 2E2HC 3GTGC 2O5IA 5IYBC 2R92K 4NOIA 5C3EK 3K7AC 3I4MK 2R7ZC 4A3JK 3M4OK 4OINA 5IYDK 4A3GK 4X6AK 4BY1C 2VUMC 3S1MC 2PA8D 3H3VL 3HOWK 1I3QC 2NVQK 3RZOK 1I50C 4OIPA 3GTLC 5IP7K 1TWFK 3CQZC 4A3CC 4C3HK 1I6HC 4OIRA 2WAQD 3GTKC 4QJVB 3S17K 3S1RK 4QJVA 3RZDC 3PO2K 1K83C 4A93C 1WCMK 4A3IK 3HKZL 2JA8K 4XLPA 3HOVK 2NVXK 3S2DK 4YFXA 3HOUC 3S1NC 4GZYA 4G7OA 3S2HC 4A3BK 5M3MK 4MEXA 1YNJA 4A3KC 3I4NC 4BXXK 4BBRC 4YFKA 2E2IK 4YG2A 3S15K 5C44K 3H0GC 2E2HK 1TWGK 5IYBK 4Q4ZA 1HQMA 2PPBA 4A3DC 5C4XC 3K7AK 4QIWL 4KN4A 3S1QC 2R7ZK 4BY1K 2VUMK 2JA7C 4MEYA 2WB1L 3S1MK 4AYBL 1I3QK 2PMZL 3S16C 3HOYC 4A3LC 2A6EA 2CW0A 3S14C 4KN7A 1TWCC 3H3VD 2B63K 4Y52C 3CQZK 4A3CK 5TMFA 1TWAC 2JA5K 1I6HK 4Y7NC 3GTKK 4KMUA 4C3IC 3RZDK 1XPPA 1SMYA 3GTQC 1K83K 4BY7C 2PA8L 4ZH4A 4A93K 5M5WK 2NVYC 3HOUK 5FJ8K 3S2HK 3GTPK 4A3KK 2JA6C 3I4NK 4YFNA 2E2JC 1SFOC 4BBRK 4C3JC 2Y0SL 3FKIC 3GTGK 1Y1VC 4A3EC 4C2MC 3H0GK 4MQ9A 4JK1A 4BBSC 4LJZA 4Q5SA 4A3DK 3GTMC 1TWFC 3S1QK 2YU9C 5IP9C 4LK0A 1TWHC 3GTOC 2R93C 3S1RC 3HOZC
chains in the Genus database with same CATH superfamily
4XLNA 4KC6A 3S16K 4KASA 2ZUFA 3HOYK 1PJ7A 1IL2A 1JOEA 3S14K 3PO3C 4WF9S 4A3MC 1USOA 3JSTA 1TWGC 4KMHA 1I6VA 1O25A 2NVYK 3I4MC 4KM8A 4A3JC 3LPXA 3HKZD 3WODA 2E2JK 1ZYRA 2NVQC 3FKIK 3RZOC 3TFHA 4RMFA 3LAPA 2YU9K 2JA7K 3FOFA 3GTOK 3NUHA 3OEPA 2JA8C 1BDFA 4P5BA 4A3FK 2L5NA 1GE9A 2NVTK 4A3BC 4G7ZA 1G51A 3N3YA 3M3YK 4Y7NK 3HOXK 3GTGC 1XZPA 4NOIA 1O24A 5C3EK 4J3NA 2JA7A 1IS1A 3M4OK 1YCLA 2W7VA 1TWCA 3FOEA 4KDDA 1TWFK 4A3CC 1XZQA 4WFAS 2RH6A 4OIRA 4QJVA 3PO2K 4A93C 1KQ4A 4A3IK 4XLPA 3S2DK 2JA6A 2ZFZA 3HOUC 3S2HC 5IOTA 4MEXA 1USMA 1YNJA 1Y1VA 2P8TA 3TTGA 1O2FB 2E2IK 3S15K 3GTMA 1TWFA 2PPBA 4WJ4A 4A3DC 1TWHA 1VLOA 4QIWL 1R9TA 3CAGA 3IPJA 4BY1K 3S1MK 2JA7C 4MEYA 4AYBL 3FHZA 4GTLA 2V6UA 3AH5A 4A3LC 3H3VD 1TWCC 3CQZK 1ISEA 2V6TA 4Y7NC 1ZBSA 3GTKK 1XXCA 1XXBA 3L4KA 4BY7C 5HL7S 1L0WA 5M5WK 3AQPA 1IQ0A 3GEHA 2JA6C 4IOCS 1Y1VC 3H0GK 2V6SA 3GEIA 3GTMC 1TWFC 3S1QK 2NVXA 1TWHC 1DCOA 1R9TC 1WQFA 3GTLK 5D4DA 3SZZA 2O5JA 5IYCC 1IW7A 5C4JC 4OIOA 4C3IK 3S1NK 5CJ9A 4XSZA 2A68A 1WOPA 4U67S 4X6AC 3EQLA 1WSRA 3S0XA 1SFOK 2BE5A 3GTLA 1IE0A 2CFAB 4C2MK 4G0VA 1EI6A 2A69A 1VGXA 5M3FK 1K83A 3S17C 1O27A 1VRQC 3HOVC 1UV7A 5C4XK 3HOZK 5DM7S 4QIWD 2NVXC 1DCHA 2EBBA 1B4BA 3GTGA 4AYBD 1Y1WK 1TWAK 4BXXC 3GTJK 3TFJA 1YNNA 5FLMK 5C44C 4BKWA 2R92K 5IYBC 3SZYA 4GTBA 3K7AC 5IYDK 4A3GK 4IOAS 3H3VL 4GTCA 4KARA 3HOWK 4KATA 2JH3A 4BLBA 4G0WA 1TWAA 3GTLC 5IP7K 4C3HK 1I6HC 1F9NA 3PIOS 2NVYA 1B4AA 3RZDC 1K83C 1WCMK 3GSIA 3S1NC 4G7OA 5M3MK 3FKIA 4BBRC 4YFKA 3GDZA 4GT9A 2E2HK 2YU9A 3GTOA 1O2BA 4KN4A 2R7ZK 5IOSA 2VUMK 3MMLB 1BGWA 2ZJQS 1I3QK 3S16C 1RU0A 3HOYC 5HL8A 1AB4A 3S14C 4KN7A 2B63K 1J98A 3BUEA 4FM9A 1XXAA 1TWAC 4KMUA 2PA8L 3GEEA 1INNA 1ZVUA 2NVYC 5FJ8K 2GSOA 3GTPK 4A3KK 3I4NK 4YFNA 4FZBA 2E2JC 3A8KA 4KB2A 4M1XA 5TJ3A 3LAJA 3FKIC 4GFQA 2B63A 5EGHA 4PAAA 4WFNS 4ILDA 2YU9C 3GTOC 1DD5A 4XCHA 3TFIA 4A3FC 3N0CA 1I50K 3GTPA 4G7HA 2NVTC 2E2IA 3AQOA 3DXJA 4Y52K 3M3YC 4XSXA 3HOXC 3AD9C 3BP3A 4OIQA 3GTQK 3BP8C 4P5AA 4WJ3M 5C3EC 1V5VA 4LOWA 4LQYA 3M4OC 1BS2A 4GTFA 1I50A 4C3JK 5TMCA 3CQZA 4A3EK 2CFAA 3GTKA 4AH6A 4BBSK 2B63C 4WFBS 2GAHC 5IP9K 2ZJRS 4LK1A 3PO2C 2R93K 4A3IC 3S2DC 5JFEA 5M5XK 3PO3K 2A6HA 3GTPC 1EQRA 3H0GA 2XCQA 4LR2A 2E2IC 4A3MK 3S15C 3I4MK 4A3JK 4OINA 4BY1C 3CF5S 3S1MC 2PA8D 5L46A 1EFWA 1PJ6A 2NVQK 3RZOK 1I50C 5HQHA 3G4AA 3ADAC 5JVHS 3CQZC 4GTEA 1ZQ1C 2GSUA 1WIHA 4C45A 2WAQD 3GTKC 1FEUA 3S1RK 3T02A 2JA8K 3OREA 3L4JA 4YFXA 4IO9S 4GZYA 1O26A 1SFOA 4A3BK 2ZJPS 1IBAA 3H0GC 1JVIA 4Q4ZA 1HQMA 3HXAA 3LYWA 3S1QC 1F93A 2WB1L 3A8JA 1Y1WA 2KQ1A 2KWAA 2A6EA 3GTJA 1F7UA 2CW0A 2L3UA 2XCRB 2R92A 4WILA 4A3CK 5TMFA 2JA5K 2FQOA 1WOOA 4C3IC 4GTAA 1XPPA 1SMYA 4A93K 3T00A 3HOUK 1EK8A 3S2HK 1SFOC 1WSVA 5EGEA 4C2MC 1YX2A 1DCPA 2JA5A 4LJZA 4A3DK 3T01A 1WCMA 4LK0A 1J6WA 5C4XC 3S1RC 3HOZC 1J6XA 4A3LK 3PIPS 1VJEA 1Y1WC 1TWCK 2XCOA 2E2HA 2PMZD 3GTJC 5FLMC 1WQHA 2R92C 3AD7C 4LLGA 2R7ZA 4BY7K 2VUMA 1I3QA 5IYDC 3ERED 4A3GC 5IOQA 2RGRA 3OPFA 2JA6K 3N0BA 3HOWC 1PJ5A 5M5YK 3Q3QA 1Y1VK 2WAQL 3A8IA 5DM6S 1BJTA 5IP7C 5JVGS 4DDQA 4C3HC 1O2AA 3GTMK 2Y0SD 2JA5C 1TWHK 4WCES 1WCMC 1JQWA 1O28A 4KMDA 4O2DA 1X31C 1R9TK 2WB1D 3GIRA 5IYCK 5C4JK 2FQTA 1WOSA 1XZPB 2E2HC 2O5IA 4P9SA 3VA7A 1HI9A 2KPUA 4GTDA 2R7ZC 3AD8C 2VUMC 4X6AK 1I3QC 2GAGC 3V4GA 3DLLS 4OIPA 1XZQB 1ZXOA 2ZUEA 3GTQA 5IORA 4QJVB 4KMAA 3S17K 4KB4A 3HOVK 3HKZL 2P5MA 2NVXK 1EH1A 4A3KC 3I4NC 3G4CA 1VH2A 4BXXK 2PHCB 2Y3PA 4YG2A 3QX3A 2KXYA 5C44K 1TWGK 5IYBK 2R93A 5E68A 4BLAA 1O29A 1WORA 3K7AK 5CHPA 4PABA 2PMZL 1F7VA 4Y52C 1TWGA 4KM9A 1I6HK 3RZDK 1J6VA 3GTQC 1K83K 2D6FC 4ZH4A 4BBRK 4C3JC 2GSNA 1C0AA 2Y0SL 3GTGK 4A3EC 4MQ9A 4JK1A 4BBSC 4Q5SA 5JVOA 4G0UA 5IP9C 2R93C 1WQGA 4KAWX
chains in the Genus database with same CATH topology
4A3FC 4XLNA 1R9TC 4G7HA 1I50K 2NVTC 3HOYK 3GTLK 3S16K 5D4DA 4A3LK 2O5JA 3S14K 3PO3C 1Y1WC 1TWCK 5IYCC 1IW7A 3DXJA 3M3YC 4XSXA 5C4JC 3HOXC 2PMZD 3GTJC 4A3MC 4OIOA 5FLMC 2R92C 4C3IK 4OIQA 4LLGA 3GTQK 1TWGC 4BY7K 3S1NK 1I6VA 5C3EC 2NVYK 3I4MC 4XSZA 4A3JC 2A68A 3M4OC 5IYDC 4A3GC 4X6AC 2JA6K 3HKZD 3EQLA 3WODA 2E2JK 3HOWC 2BE5A 5M5YK 1ZYRA 5TMCA 2NVQC 4C3JK 3FKIK 3RZOC 1SFOK 1Y1VK 2WAQL 4A3EK 4C2MK 2A69A 5IP7C 4BBSK 5M3FK 4C3HC 2B63C 3GTMK 2Y0SD 2YU9K 3S17C 2JA5C 5IP9K 1TWHK 2JA7K 3GTOK 4LK1A 3PO2C 2R93K 1WCMC 4A3IC 2JA8C 3HOVC 5C4XK 3HOZK 3S2DC 2NVXC 1BDFA 4QIWD 4A3FK 1R9TK 5M5XK 2NVTK 4A3BC 4Y52K 4G7ZA 2WB1D 4AYBD 3PO3K 2A6HA 3GTPC 1TWAK 5IYCK 1Y1WK 4BXXC 3M3YK 4Y7NK 5C4JK 3HOXK 2E2IC 3GTJK 1YNNA 4A3MK 3S15C 5FLMK 5C44C 2E2HC 3GTGC 2O5IA 5IYBC 2R92K 4NOIA 5C3EK 3K7AC 3I4MK 2R7ZC 4A3JK 3M4OK 4OINA 5IYDK 4A3GK 4X6AK 4BY1C 2VUMC 3S1MC 2PA8D 3H3VL 3HOWK 1I3QC 2NVQK 3RZOK 1I50C 4OIPA 3GTLC 5IP7K 1TWFK 3CQZC 4A3CC 4C3HK 1I6HC 4OIRA 2WAQD 3GTKC 4QJVB 3S17K 3S1RK 4QJVA 3RZDC 3PO2K 1K83C 4A93C 1WCMK 4A3IK 3HKZL 2JA8K 4XLPA 3HOVK 2NVXK 3S2DK 4YFXA 3HOUC 3S1NC 4GZYA 4G7OA 3S2HC 4A3BK 5M3MK 4MEXA 1YNJA 4A3KC 3I4NC 4BXXK 4BBRC 4YFKA 2E2IK 4YG2A 3S15K 5C44K 3H0GC 2E2HK 1TWGK 5IYBK 4Q4ZA 1HQMA 2PPBA 4A3DC 5C4XC 3K7AK 4QIWL 4KN4A 3S1QC 2R7ZK 4BY1K 2VUMK 2JA7C 4MEYA 2WB1L 3S1MK 4AYBL 1I3QK 2PMZL 3S16C 3HOYC 4A3LC 2A6EA 2CW0A 3S14C 4KN7A 1TWCC 3H3VD 2B63K 4Y52C 3CQZK 4A3CK 5TMFA 1TWAC 2JA5K 1I6HK 4Y7NC 3GTKK 4KMUA 4C3IC 3RZDK 1XPPA 1SMYA 3GTQC 1K83K 4BY7C 2PA8L 4ZH4A 4A93K 5M5WK 2NVYC 3HOUK 5FJ8K 3S2HK 3GTPK 4A3KK 2JA6C 3I4NK 4YFNA 2E2JC 1SFOC 4BBRK 4C3JC 2Y0SL 3FKIC 3GTGK 1Y1VC 4A3EC 4C2MC 3H0GK 4MQ9A 4JK1A 4BBSC 4LJZA 4Q5SA 4A3DK 3GTMC 1TWFC 3S1QK 2YU9C 5IP9C 4LK0A 1TWHC 3GTOC 2R93C 3S1RC 3HOZC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3F C;  4XLN A;  1R9T C;  4G7H A;  1I50 K;  2NVT C;  3HOY K;  3GTL K;  3S16 K;  5D4D A;  4A3L K;  2O5J A;  3S14 K;  3PO3 C;  1Y1W C;  1TWC K;  5IYC C;  1IW7 A;  3DXJ A;  3M3Y C;  4XSX A;  5C4J C;  3HOX C;  2PMZ D;  3GTJ C;  4A3M C;  4OIO A;  5FLM C;  2R92 C;  4C3I K;  4OIQ A;  4LLG A;  3GTQ K;  1TWG C;  4BY7 K;  3S1N K;  1I6V A;  5C3E C;  2NVY K;  3I4M C;  4XSZ A;  4A3J C;  2A68 A;  3M4O C;  5IYD C;  4A3G C;  4X6A C;  2JA6 K;  3HKZ D;  3EQL A;  3WOD A;  2E2J K;  3HOW C;  2BE5 A;  5M5Y K;  1ZYR A;  5TMC A;  2NVQ C;  4C3J K;  3FKI K;  3RZO C;  1SFO K;  1Y1V K;  2WAQ L;  4A3E K;  4C2M K;  2A69 A;  5IP7 C;  4BBS K;  5M3F K;  4C3H C;  2B63 C;  3GTM K;  2Y0S D;  2YU9 K;  3S17 C;  2JA5 C;  5IP9 K;  1TWH K;  2JA7 K;  3GTO K;  4LK1 A;  3PO2 C;  2R93 K;  1WCM C;  4A3I C;  2JA8 C;  3HOV C;  5C4X K;  3HOZ K;  3S2D C;  2NVX C;  1BDF A;  4QIW D;  4A3F K;  1R9T K;  5M5X K;  2NVT K;  4A3B C;  4Y52 K;  4G7Z A;  2WB1 D;  4AYB D;  3PO3 K;  2A6H A;  3GTP C;  1TWA K;  5IYC K;  1Y1W K;  4BXX C;  3M3Y K;  4Y7N K;  5C4J K;  3HOX K;  2E2I C;  3GTJ K;  1YNN A;  4A3M K;  3S15 C;  5FLM K;  5C44 C;  2E2H C;  3GTG C;  2O5I A;  5IYB C;  2R92 K;  4NOI A;  5C3E K;  3K7A C;  3I4M K;  2R7Z C;  4A3J K;  3M4O K;  4OIN A;  5IYD K;  4A3G K;  4X6A K;  4BY1 C;  2VUM C;  3S1M C;  2PA8 D;  3H3V L;  3HOW K;  1I3Q C;  2NVQ K;  3RZO K;  1I50 C;  4OIP A;  3GTL C;  5IP7 K;  1TWF K;  3CQZ C;  4A3C C;  4C3H K;  1I6H C;  4OIR A;  2WAQ D;  3GTK C;  4QJV B;  3S17 K;  3S1R K;  4QJV A;  3RZD C;  3PO2 K;  1K83 C;  4A93 C;  1WCM K;  4A3I K;  3HKZ L;  2JA8 K;  4XLP A;  3HOV K;  2NVX K;  3S2D K;  4YFX A;  3HOU C;  3S1N C;  4GZY A;  4G7O A;  3S2H C;  4A3B K;  5M3M K;  4MEX A;  1YNJ A;  4A3K C;  3I4N C;  4BXX K;  4BBR C;  4YFK A;  2E2I K;  4YG2 A;  3S15 K;  5C44 K;  3H0G C;  2E2H K;  1TWG K;  5IYB K;  4Q4Z A;  1HQM A;  2PPB A;  4A3D C;  5C4X C;  3K7A K;  4QIW L;  4KN4 A;  3S1Q C;  2R7Z K;  4BY1 K;  2VUM K;  2JA7 C;  4MEY A;  2WB1 L;  3S1M K;  4AYB L;  1I3Q K;  2PMZ L;  3S16 C;  3HOY C;  4A3L C;  2A6E A;  2CW0 A;  3S14 C;  4KN7 A;  1TWC C;  3H3V D;  2B63 K;  4Y52 C;  3CQZ K;  4A3C K;  5TMF A;  1TWA C;  2JA5 K;  1I6H K;  4Y7N C;  3GTK K;  4KMU A;  4C3I C;  3RZD K;  1XPP A;  1SMY A;  3GTQ C;  1K83 K;  4BY7 C;  2PA8 L;  4ZH4 A;  4A93 K;  5M5W K;  2NVY C;  3HOU K;  5FJ8 K;  3S2H K;  3GTP K;  4A3K K;  2JA6 C;  3I4N K;  4YFN A;  2E2J C;  1SFO C;  4BBR K;  4C3J C;  2Y0S L;  3FKI C;  3GTG K;  1Y1V C;  4A3E C;  4C2M C;  3H0G K;  4MQ9 A;  4JK1 A;  4BBS C;  4LJZ A;  4Q5S A;  4A3D K;  3GTM C;  1TWF C;  3S1Q K;  2YU9 C;  5IP9 C;  4LK0 A;  1TWH C;  3GTO C;  2R93 C;  3S1R C;  3HOZ C; 
#chains in the Genus database with same CATH topology
 4XLN A;  4KC6 A;  3S16 K;  4KAS A;  2ZUF A;  3HOY K;  1PJ7 A;  1IL2 A;  1JOE A;  3S14 K;  3PO3 C;  4WF9 S;  4A3M C;  1USO A;  3JST A;  1TWG C;  4KMH A;  1I6V A;  1O25 A;  2NVY K;  3I4M C;  4KM8 A;  4A3J C;  3LPX A;  3HKZ D;  3WOD A;  2E2J K;  1ZYR A;  2NVQ C;  3FKI K;  3RZO C;  3TFH A;  4RMF A;  3LAP A;  2YU9 K;  2JA7 K;  3FOF A;  3GTO K;  3NUH A;  3OEP A;  2JA8 C;  1BDF A;  4P5B A;  4A3F K;  2L5N A;  1GE9 A;  2NVT K;  4A3B C;  4G7Z A;  1G51 A;  3N3Y A;  3M3Y K;  4Y7N K;  3HOX K;  3GTG C;  1XZP A;  4NOI A;  1O24 A;  5C3E K;  4J3N A;  2JA7 A;  1IS1 A;  3M4O K;  1YCL A;  2W7V A;  1TWC A;  3FOE A;  4KDD A;  1TWF K;  4A3C C;  1XZQ A;  4WFA S;  2RH6 A;  4OIR A;  4QJV A;  3PO2 K;  4A93 C;  1KQ4 A;  4A3I K;  4XLP A;  3S2D K;  2JA6 A;  2ZFZ A;  3HOU C;  3S2H C;  5IOT A;  4MEX A;  1USM A;  1YNJ A;  1Y1V A;  2P8T A;  3TTG A;  1O2F B;  2E2I K;  3S15 K;  3GTM A;  1TWF A;  2PPB A;  4WJ4 A;  4A3D C;  1TWH A;  1VLO A;  4QIW L;  1R9T A;  3CAG A;  3IPJ A;  4BY1 K;  3S1M K;  2JA7 C;  4MEY A;  4AYB L;  3FHZ A;  4GTL A;  2V6U A;  3AH5 A;  4A3L C;  3H3V D;  1TWC C;  3CQZ K;  1ISE A;  2V6T A;  4Y7N C;  1ZBS A;  3GTK K;  1XXC A;  1XXB A;  3L4K A;  4BY7 C;  5HL7 S;  1L0W A;  5M5W K;  3AQP A;  1IQ0 A;  3GEH A;  2JA6 C;  4IOC S;  1Y1V C;  3H0G K;  2V6S A;  3GEI A;  3GTM C;  1TWF C;  3S1Q K;  2NVX A;  1TWH C;  1DCO A;  1R9T C;  1WQF A;  3GTL K;  5D4D A;  3SZZ A;  2O5J A;  5IYC C;  1IW7 A;  5C4J C;  4OIO A;  4C3I K;  3S1N K;  5CJ9 A;  4XSZ A;  2A68 A;  1WOP A;  4U67 S;  4X6A C;  3EQL A;  1WSR A;  3S0X A;  1SFO K;  2BE5 A;  3GTL A;  1IE0 A;  2CFA B;  4C2M K;  4G0V A;  1EI6 A;  2A69 A;  1VGX A;  5M3F K;  1K83 A;  3S17 C;  1O27 A;  1VRQ C;  3HOV C;  1UV7 A;  5C4X K;  3HOZ K;  5DM7 S;  4QIW D;  2NVX C;  1DCH A;  2EBB A;  1B4B A;  3GTG A;  4AYB D;  1Y1W K;  1TWA K;  4BXX C;  3GTJ K;  3TFJ A;  1YNN A;  5FLM K;  5C44 C;  4BKW A;  2R92 K;  5IYB C;  3SZY A;  4GTB A;  3K7A C;  5IYD K;  4A3G K;  4IOA S;  3H3V L;  4GTC A;  4KAR A;  3HOW K;  4KAT A;  2JH3 A;  4BLB A;  4G0W A;  1TWA A;  3GTL C;  5IP7 K;  4C3H K;  1I6H C;  1F9N A;  3PIO S;  2NVY A;  1B4A A;  3RZD C;  1K83 C;  1WCM K;  3GSI A;  3S1N C;  4G7O A;  5M3M K;  3FKI A;  4BBR C;  4YFK A;  3GDZ A;  4GT9 A;  2E2H K;  2YU9 A;  3GTO A;  1O2B A;  4KN4 A;  2R7Z K;  5IOS A;  2VUM K;  3MML B;  1BGW A;  2ZJQ S;  1I3Q K;  3S16 C;  1RU0 A;  3HOY C;  5HL8 A;  1AB4 A;  3S14 C;  4KN7 A;  2B63 K;  1J98 A;  3BUE A;  4FM9 A;  1XXA A;  1TWA C;  4KMU A;  2PA8 L;  3GEE A;  1INN A;  1ZVU A;  2NVY C;  5FJ8 K;  2GSO A;  3GTP K;  4A3K K;  3I4N K;  4YFN A;  4FZB A;  2E2J C;  3A8K A;  4KB2 A;  4M1X A;  5TJ3 A;  3LAJ A;  3FKI C;  4GFQ A;  2B63 A;  5EGH A;  4PAA A;  4WFN S;  4ILD A;  2YU9 C;  3GTO C;  1DD5 A;  4XCH A;  3TFI A;  4A3F C;  3N0C A;  1I50 K;  3GTP A;  4G7H A;  2NVT C;  2E2I A;  3AQO A;  3DXJ A;  4Y52 K;  3M3Y C;  4XSX A;  3HOX C;  3AD9 C;  3BP3 A;  4OIQ A;  3GTQ K;  3BP8 C;  4P5A A;  4WJ3 M;  5C3E C;  1V5V A;  4LOW A;  4LQY A;  3M4O C;  1BS2 A;  4GTF A;  1I50 A;  4C3J K;  5TMC A;  3CQZ A;  4A3E K;  2CFA A;  3GTK A;  4AH6 A;  4BBS K;  2B63 C;  4WFB S;  2GAH C;  5IP9 K;  2ZJR S;  4LK1 A;  3PO2 C;  2R93 K;  4A3I C;  3S2D C;  5JFE A;  5M5X K;  3PO3 K;  2A6H A;  3GTP C;  1EQR A;  3H0G A;  2XCQ A;  4LR2 A;  2E2I C;  4A3M K;  3S15 C;  3I4M K;  4A3J K;  4OIN A;  4BY1 C;  3CF5 S;  3S1M C;  2PA8 D;  5L46 A;  1EFW A;  1PJ6 A;  2NVQ K;  3RZO K;  1I50 C;  5HQH A;  3G4A A;  3ADA C;  5JVH S;  3CQZ C;  4GTE A;  1ZQ1 C;  2GSU A;  1WIH A;  4C45 A;  2WAQ D;  3GTK C;  1FEU A;  3S1R K;  3T02 A;  2JA8 K;  3ORE A;  3L4J A;  4YFX A;  4IO9 S;  4GZY A;  1O26 A;  1SFO A;  4A3B K;  2ZJP S;  1IBA A;  3H0G C;  1JVI A;  4Q4Z A;  1HQM A;  3HXA A;  3LYW A;  3S1Q C;  1F93 A;  2WB1 L;  3A8J A;  1Y1W A;  2KQ1 A;  2KWA A;  2A6E A;  3GTJ A;  1F7U A;  2CW0 A;  2L3U A;  2XCR B;  2R92 A;  4WIL A;  4A3C K;  5TMF A;  2JA5 K;  2FQO A;  1WOO A;  4C3I C;  4GTA A;  1XPP A;  1SMY A;  4A93 K;  3T00 A;  3HOU K;  1EK8 A;  3S2H K;  1SFO C;  1WSV A;  5EGE A;  4C2M C;  1YX2 A;  1DCP A;  2JA5 A;  4LJZ A;  4A3D K;  3T01 A;  1WCM A;  4LK0 A;  1J6W A;  5C4X C;  3S1R C;  3HOZ C;  1J6X A;  4A3L K;  3PIP S;  1VJE A;  1Y1W C;  1TWC K;  2XCO A;  2E2H A;  2PMZ D;  3GTJ C;  5FLM C;  1WQH A;  2R92 C;  3AD7 C;  4LLG A;  2R7Z A;  4BY7 K;  2VUM A;  1I3Q A;  5IYD C;  3ERE D;  4A3G C;  5IOQ A;  2RGR A;  3OPF A;  2JA6 K;  3N0B A;  3HOW C;  1PJ5 A;  5M5Y K;  3Q3Q A;  1Y1V K;  2WAQ L;  3A8I A;  5DM6 S;  1BJT A;  5IP7 C;  5JVG S;  4DDQ A;  4C3H C;  1O2A A;  3GTM K;  2Y0S D;  2JA5 C;  1TWH K;  4WCE S;  1WCM C;  1JQW A;  1O28 A;  4KMD A;  4O2D A;  1X31 C;  1R9T K;  2WB1 D;  3GIR A;  5IYC K;  5C4J K;  2FQT A;  1WOS A;  1XZP B;  2E2H C;  2O5I A;  4P9S A;  3VA7 A;  1HI9 A;  2KPU A;  4GTD A;  2R7Z C;  3AD8 C;  2VUM C;  4X6A K;  1I3Q C;  2GAG C;  3V4G A;  3DLL S;  4OIP A;  1XZQ B;  1ZXO A;  2ZUE A;  3GTQ A;  5IOR A;  4QJV B;  4KMA A;  3S17 K;  4KB4 A;  3HOV K;  3HKZ L;  2P5M A;  2NVX K;  1EH1 A;  4A3K C;  3I4N C;  3G4C A;  1VH2 A;  4BXX K;  2PHC B;  2Y3P A;  4YG2 A;  3QX3 A;  2KXY A;  5C44 K;  1TWG K;  5IYB K;  2R93 A;  5E68 A;  4BLA A;  1O29 A;  1WOR A;  3K7A K;  5CHP A;  4PAB A;  2PMZ L;  1F7V A;  4Y52 C;  1TWG A;  4KM9 A;  1I6H K;  3RZD K;  1J6V A;  3GTQ C;  1K83 K;  2D6F C;  4ZH4 A;  4BBR K;  4C3J C;  2GSN A;  1C0A A;  2Y0S L;  3GTG K;  4A3E C;  4MQ9 A;  4JK1 A;  4BBS C;  4Q5S A;  5JVO A;  4G0U A;  5IP9 C;  2R93 C;  1WQG A;  4KAW X; 
#chains in the Genus database with same CATH homology
 4A3F C;  4XLN A;  1R9T C;  4G7H A;  1I50 K;  2NVT C;  3HOY K;  3GTL K;  3S16 K;  5D4D A;  4A3L K;  2O5J A;  3S14 K;  3PO3 C;  1Y1W C;  1TWC K;  5IYC C;  1IW7 A;  3DXJ A;  3M3Y C;  4XSX A;  5C4J C;  3HOX C;  2PMZ D;  3GTJ C;  4A3M C;  4OIO A;  5FLM C;  2R92 C;  4C3I K;  4OIQ A;  4LLG A;  3GTQ K;  1TWG C;  4BY7 K;  3S1N K;  1I6V A;  5C3E C;  2NVY K;  3I4M C;  4XSZ A;  4A3J C;  2A68 A;  3M4O C;  5IYD C;  4A3G C;  4X6A C;  2JA6 K;  3HKZ D;  3EQL A;  3WOD A;  2E2J K;  3HOW C;  2BE5 A;  5M5Y K;  1ZYR A;  5TMC A;  2NVQ C;  4C3J K;  3FKI K;  3RZO C;  1SFO K;  1Y1V K;  2WAQ L;  4A3E K;  4C2M K;  2A69 A;  5IP7 C;  4BBS K;  5M3F K;  4C3H C;  2B63 C;  3GTM K;  2Y0S D;  2YU9 K;  3S17 C;  2JA5 C;  5IP9 K;  1TWH K;  2JA7 K;  3GTO K;  4LK1 A;  3PO2 C;  2R93 K;  1WCM C;  4A3I C;  2JA8 C;  3HOV C;  5C4X K;  3HOZ K;  3S2D C;  2NVX C;  1BDF A;  4QIW D;  4A3F K;  1R9T K;  5M5X K;  2NVT K;  4A3B C;  4Y52 K;  4G7Z A;  2WB1 D;  4AYB D;  3PO3 K;  2A6H A;  3GTP C;  1TWA K;  5IYC K;  1Y1W K;  4BXX C;  3M3Y K;  4Y7N K;  5C4J K;  3HOX K;  2E2I C;  3GTJ K;  1YNN A;  4A3M K;  3S15 C;  5FLM K;  5C44 C;  2E2H C;  3GTG C;  2O5I A;  5IYB C;  2R92 K;  4NOI A;  5C3E K;  3K7A C;  3I4M K;  2R7Z C;  4A3J K;  3M4O K;  4OIN A;  5IYD K;  4A3G K;  4X6A K;  4BY1 C;  2VUM C;  3S1M C;  2PA8 D;  3H3V L;  3HOW K;  1I3Q C;  2NVQ K;  3RZO K;  1I50 C;  4OIP A;  3GTL C;  5IP7 K;  1TWF K;  3CQZ C;  4A3C C;  4C3H K;  1I6H C;  4OIR A;  2WAQ D;  3GTK C;  4QJV B;  3S17 K;  3S1R K;  4QJV A;  3RZD C;  3PO2 K;  1K83 C;  4A93 C;  1WCM K;  4A3I K;  3HKZ L;  2JA8 K;  4XLP A;  3HOV K;  2NVX K;  3S2D K;  4YFX A;  3HOU C;  3S1N C;  4GZY A;  4G7O A;  3S2H C;  4A3B K;  5M3M K;  4MEX A;  1YNJ A;  4A3K C;  3I4N C;  4BXX K;  4BBR C;  4YFK A;  2E2I K;  4YG2 A;  3S15 K;  5C44 K;  3H0G C;  2E2H K;  1TWG K;  5IYB K;  4Q4Z A;  1HQM A;  2PPB A;  4A3D C;  5C4X C;  3K7A K;  4QIW L;  4KN4 A;  3S1Q C;  2R7Z K;  4BY1 K;  2VUM K;  2JA7 C;  4MEY A;  2WB1 L;  3S1M K;  4AYB L;  1I3Q K;  2PMZ L;  3S16 C;  3HOY C;  4A3L C;  2A6E A;  2CW0 A;  3S14 C;  4KN7 A;  1TWC C;  3H3V D;  2B63 K;  4Y52 C;  3CQZ K;  4A3C K;  5TMF A;  1TWA C;  2JA5 K;  1I6H K;  4Y7N C;  3GTK K;  4KMU A;  4C3I C;  3RZD K;  1XPP A;  1SMY A;  3GTQ C;  1K83 K;  4BY7 C;  2PA8 L;  4ZH4 A;  4A93 K;  5M5W K;  2NVY C;  3HOU K;  5FJ8 K;  3S2H K;  3GTP K;  4A3K K;  2JA6 C;  3I4N K;  4YFN A;  2E2J C;  1SFO C;  4BBR K;  4C3J C;  2Y0S L;  3FKI C;  3GTG K;  1Y1V C;  4A3E C;  4C2M C;  3H0G K;  4MQ9 A;  4JK1 A;  4BBS C;  4LJZ A;  4Q5S A;  4A3D K;  3GTM C;  1TWF C;  3S1Q K;  2YU9 C;  5IP9 C;  4LK0 A;  1TWH C;  3GTO C;  2R93 C;  3S1R C;  3HOZ C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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