3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
4A3GC 4A3KC 4BBRC 3S17C 4MEXA 4Y52C 4A3JK 2NVXC 2Y0SD 4BY7K 5C44C 3H0GK 3HKZD 4A3CK 4A3DC 2VUMK 4MEYA 2E2IK 2PA8D 4A3FK 1I6VA 4Q4ZA 4C3JC 4OIQA 3GTOC 4OIOA 3HOVC 4G7ZA 3K7AK 3HOUK 3RZOK 1I3QC 5C4XK 1TWCC 4LK0A 4BBSC 5IP7C 5IYBC 4ZH4A 5IYDC 2YU9C 2NVTC 3GTJK 3S1RK 3GTQK 1I50C 3GTLC 3HOZK 4X6AK 5M5YK 1TWHK 3HOYC 3PO3C 4A3BC 3M4OC 4OIRA 5IYCK 4GZYA 4Y7NK 1Y1WK 2NVYK 4NOIA 5C4JK 3FKIK 4C2MK 3S1QC 3I4MK 1I6HC 4A3GK 3HOXC 4A3KK 2R92C 2R93C 4BBRK 3S17K 4A93C 1TWAC 3RZDC 4Y52K 4BXXC 3GTPC 2B63C 2NVXK 1TWGC 5C44K 3GTMC 2CW0A 1SFOC 4A3DK 5FLMC 4XLNA 2JA5C 4BY1C 3S1MC 3S14C 5TMCA 4XSXA 4C3JK 5M3MK 3GTOK 3HOVK 2E2JC 4OINA 3H3VD 4OIPA 4YFXA 1I3QK 4AYBD 3S15C 4A3MC 2WB1L 1TWCK 1IW7A 5M5WK 2O5JA 4A3IC 4BBSK 2Y0SL 5IP7K 4QIWD 5IYBK 2PMZD 4A3LC 2YU9K 4LK1A 2NVTK 2JA8C 1I50K 3GTLK 5TMFA 1TWFC 2PA8L 2WAQL 3HOYK 3PO3K 1R9TC 3M4OK 1BDFA 4LLGA 4A3BK 3S2DC 4QJVA 3DXJA 2O5IA 3I4NC 4C3HC 3PO2C 4MQ9A 4G7HA 1K83C 4A3EC 1XPPA 3S1QK 2A68A 1I6HK 3HOXK 2R92K 2R93K 4A93K 1TWAK 5IP9C 3RZDK 4BXXK 2R7ZC 3S1NC 2B63K 3GTPK 1TWGK 1YNNA 3GTMK 1SFOK 3M3YC 4C3IC 5FLMK 1HQMA 2JA5K 4BY1K 3S1MK 3S14K 5D4DA 4YFKA 2E2HC 4YFNA 3S2HC 1Y1VC 3GTGC 5C3EC 2E2JK 3WODA 1YNJA 4G7OA 5IYDK 3CQZC 2A6EA 4Q5SA 4A3MK 3GTKC 3S15K 4A3IK 1WCMC 4A3LK 3HKZL 3HOWC 2JA8K 4XSZA 2NVQC 2BE5A 2JA6C 1TWFK 4QJVB 4KMUA 3S16C 1R9TK 2JA7C 1SMYA 3S2DK 3I4NK 4C3HK 3H3VL 2WB1D 4KN4A 4A3JC 3PO2K 1K83K 4A3EK 4AYBL 4BY7C 3H0GC 1ZYRA 4A3CC 5M3FK 5FJ8K 2VUMC 4JK1A 4QIWL 2E2IC 2PMZL 2WAQD 5IP9K 4A3FC 2R7ZK 3S1NK 2A69A 3K7AC 3HOUC 3M3YK 4C3IK 3RZOC 5C4XC 2E2HK 3S2HK 1Y1VK 3GTJC 4LJZA 4YG2A 3S1RC 3EQLA 3GTQC 5C3EK 3GTGK 3HOZC 4X6AC 3CQZK 1TWHC 3GTKK 3S16K 4KN7A 2A6HA 1WCMK 5IYCC 4Y7NC 1Y1WC 2NVYC 2PPBA 5M5XK 3HOWK 4XLPA 2JA6K 2NVQK 5C4JC 3FKIC 4C2MC 3I4MC 2JA7K
chains in the Genus database with same CATH superfamily
3S17C 3LAJA 4BY7K 5DM7S 1JQWA 4LQYA 4A3FK 4Q4ZA 4OIQA 4G7ZA 2XCRB 5C4XK 3QX3A 5IYDC 1XZQB 3GTLC 4X6AK 5M5YK 1TWHK 3HOYC 4A3BC 2R93A 4OIRA 4WJ4A 4GZYA 1TWAA 2JH3A 4NOIA 1O2FB 3LPXA 3GTMA 1WIHA 3I4MK 2R93C 3S17K 1O27A 1TWAC 5JVGS 3A8JA 4U67S 3GTMC 3JSTA 3AD8C 5CHPA 4P9SA 5HQHA 2E2JC 1F7VA 2XCOA 1R9TA 4A3MC 2WB1L 1WSRA 2O5JA 5IYDK 4A3LC 4GTDA 4IOCS 1O2BA 3GTLK 4WJ3M 2Y3PA 3HOYK 1R9TC 4A3BK 1BDFA 3S2DC 2E2IA 1IBAA 1WORA 2P5MA 4G7HA 1XPPA 1L0WA 3T01A 2A68A 1JOEA 1BS2A 2R93K 1TWAK 3GTJA 1YNNA 3GTMK 5EGHA 3M3YC 4GTLA 5D4DA 2E2HC 4PAAA 1Y1WA 5JVHS 2E2JK 1YNJA 4G7OA 4WF9S 4A3MK 2ZUFA 3CAGA 2GSOA 4A3LK 4KASA 4KATA 4QJVB 4KB2A 3BUEA 3H0GA 2ZUEA 1R9TK 2VUMA 3S2DK 3GEIA 5HL7S 1O29A 4IO9S 1PJ6A 2FQTA 4A3JC 1PJ7A 3H0GC 4A3CC 2VUMC 1I3QA 1KQ4A 3GIRA 3HOUC 3M3YK 3RZOC 2E2HK 3TTGA 3FKIA 1ZVUA 4KMDA 5IYCC 5M5XK 5C4JC 3FKIC 4KM8A 2GAHC 3OREA 4A3KC 4BBRC 2PHCB 4KMAA 4MEXA 2JA5A 1O2AA 4A3JK 1UV7A 2NVXC 3V4GA 5C44C 3H0GK 3HKZD 5TJ3A 4A3CK 2VUMK 3IPJA 4KAWX 2YU9A 1IQ0A 4G0WA 4RMFA 3HOUK 3RZOK 1DD5A 3VA7A 1ISEA 3DLLS 4ZH4A 2YU9C 2RGRA 3TFJA 1GE9A 4IOAS 4WILA 3GDZA 1XZPB 1EFWA 5IYCK 2ZJRS 3GTPA 2R7ZA 3FOEA 5C4JK 3FKIK 1TWGA 1SFOA 3HOXC 4A3KK 4BBRK 3RZDC 4FZBA 3GTPC 2NVXK 1ZBSA 1TWGC 5C44K 4C45A 1SFOC 4XLNA 4GT9A 2KPUA 1WCMA 5TMCA 4BLBA 3T00A 3TFHA 1IE0A 3H3VD 4YFXA 1EH1A 5M5WK 2KXYA 2YU9K 2JA8C 3LYWA 3L4KA 2WAQL 4GTFA 2O5IA 1VGXA 4C3HC 3Q3QA 3NUHA 3HOXK 5CJ9A 2GAGC 3RZDK 2GSNA 3ERED 3GTPK 1Y1VA 2KQ1A 1TWGK 1XXAA 1FEUA 1SFOK 1EQRA 1X31C 4PABA 1Y1VC 1O26A 2JA6A 4P5AA 4LR2A 2JA8K 2JA6C 2BE5A 4M1XA 2CFAA 1IL2A 5JFEA 4C3HK 3H3VL 4KN4A 1O25A 4G0VA 4JK1A 2E2IC 1B4AA 3G4AA 3G4CA 1J98A 1PJ5A 1WQGA 3K7AC 1Y1VK 3GTJC 3S1RC 1XZQA 2ZJQS 4KN7A 2A6HA 4Y7NC 4KMHA 1Y1WC 3N3YA 1VH2A 2JA6K 1C0AA 4KARA 1ZXOA 1INNA 1DCHA 1USMA 4FM9A 2KWAA 5IOQA 2Y0SD 3GTOA 4A3DC 5L46A 4MEYA 2E2IK 1XXBA 4LOWA 1TWCA 1F7UA 1I6VA 1J6VA 4C3JC 3GTOC 1I50A 3K7AK 1I3QC 1TWCC 4LK0A 5IP7C 3GTJK 3S1RK 1J6XA 1I50C 3M4OC 3BP3A 4Y7NK 4DDQA 1Y1WK 2V6UA 3HXAA 4P5BA 4KDDA 4WCES 4A93C 2L5NA 1V5VA 1VJEA 4BXXC 3GTGA 3ADAC 4A3DK 4GTEA 5FLMC 2JA5C 5HL8A 3S1MC 3GTKA 3S14C 4GTAA 4C3JK 5M3MK 3GTOK 4J3NA 1TWFA 4OIPA 1I3QK 3S15C 2JA7A 1TWCK 1IW7A 3AD9C 4A3IC 1G51A 2Y0SL 5IP7K 1WOOA 1WQFA 3SZZA 4LK1A 1I50K 2V6SA 1K83A 1TWFC 3AH5A 3M4OK 4LLGA 4KM9A 5IOSA 4QJVA 3I4NC 2L3UA 1K83C 4A3EC 1YCLA 3LAPA 2ZJPS 4A93K 1RU0A 4BXXK 2R7ZC 3CQZA 4WFAS 4C3IC 1DCPA 1TWHA 5FLMK 2JA5K 2D6FC 3S1MK 3OEPA 3S14K 2FQOA 4YFNA 3N0CA 3WODA 3CQZC 3S15K 1F9NA 4A3IK 1WCMC 3HKZL 3HOWC 2CFAB 4XSZA 4AH6A 1TWFK 1DCOA 3S16C 3I4NK 3PIOS 2WB1D 1K83K 4A3EK 1EK8A 3PIPS 5FJ8K 1WOPA 2R7ZK 1BGWA 2A69A 1WOSA 1VLOA 3GTQA 3GTLA 1IS1A 4C3IK 4WFBS 4BLAA 5JVOA 1J6WA 2NVYA 4LJZA 4YG2A 3GTQC 3HOZC 1AB4A 1O28A 3CQZK 2RH6A 3GEHA 1ZQ1C 1WCMK 4GFQA 1O24A 4G0UA 2NVYC 3HOWK 1XZPA 2XCQA 4KC6A 4C2MC 3L4JA 3S16K 4A3GC 4Y52C 4GTCA 3FHZA 2ZFZA 2PA8D 3OPFA 1F93A 3HOVC 4OIOA 4BKWA 3GSIA 4BBSC 5IYBC 2NVTC 2GSUA 3GTQK 3HOZK 3PO3C 2R92A 2NVYK 2EBBA 1WQHA 4KB4A 2B63A 5DM6S 4C2MK 3S1QC 3A8KA 1I6HC 4A3GK 2R92C 3T02A 1JVIA 2E2HA 4Y52K 2B63C 5IOTA 2CW0A 4BY1C 3A8IA 4XSXA 3HOVK 4OINA 1VRQC 4AYBD 4BBSK 3SZYA 5IYBK 2NVTK 4QIWD 2PMZD 5EGEA 5TMFA 3CF5S 2PA8L 3PO3K 1WSVA 1XXCA 3DXJA 1YX2A 3PO2C 4MQ9A 1HI9A 3S0XA 3S1QK 1I6HK 2W7VA 3AQPA 2R92K 5IORA 5IP9C 3AQOA 3S1NC 1BJTA 2B63K 1EI6A 4ILDA 3AD7C 1HQMA 4BY1K 4YFKA 3S2HC 2P8TA 4XCHA 3GTGC 5C3EC 2A6EA 4Q5SA 3GTKC 4O2DA 2NVQC 2NVXA 4KMUA 2JA7C 1USOA 2V6TA 1SMYA 3PO2K 3GEEA 4AYBL 4BY7C 1ZYRA 3FOFA 5M3FK 4QIWL 2PMZL 1B4BA 2WAQD 5IP9K 4A3FC 3S1NK 3MMLB 5C4XC 3S2HK 3GTGK 5C3EK 3EQLA 4X6AC 1TWHC 5E68A 3TFIA 3GTKK 4WFNS 3N0BA 3BP8C 2PPBA 4XLPA 4GTBA 2NVQK 3I4MC 2JA7K
chains in the Genus database with same CATH topology
4A3GC 4A3KC 4BBRC 3S17C 4MEXA 4Y52C 4A3JK 2NVXC 2Y0SD 4BY7K 5C44C 3H0GK 3HKZD 4A3CK 4A3DC 2VUMK 4MEYA 2E2IK 2PA8D 4A3FK 1I6VA 4Q4ZA 4C3JC 4OIQA 3GTOC 4OIOA 3HOVC 4G7ZA 3K7AK 3HOUK 3RZOK 1I3QC 5C4XK 1TWCC 4LK0A 4BBSC 5IP7C 5IYBC 4ZH4A 5IYDC 2YU9C 2NVTC 3GTJK 3S1RK 3GTQK 1I50C 3GTLC 3HOZK 4X6AK 5M5YK 1TWHK 3HOYC 3PO3C 4A3BC 3M4OC 4OIRA 5IYCK 4GZYA 4Y7NK 1Y1WK 2NVYK 4NOIA 5C4JK 3FKIK 4C2MK 3S1QC 3I4MK 1I6HC 4A3GK 3HOXC 4A3KK 2R92C 2R93C 4BBRK 3S17K 4A93C 1TWAC 3RZDC 4Y52K 4BXXC 3GTPC 2B63C 2NVXK 1TWGC 5C44K 3GTMC 2CW0A 1SFOC 4A3DK 5FLMC 4XLNA 2JA5C 4BY1C 3S1MC 3S14C 5TMCA 4XSXA 4C3JK 5M3MK 3GTOK 3HOVK 2E2JC 4OINA 3H3VD 4OIPA 4YFXA 1I3QK 4AYBD 3S15C 4A3MC 2WB1L 1TWCK 1IW7A 5M5WK 2O5JA 4A3IC 4BBSK 2Y0SL 5IP7K 4QIWD 5IYBK 2PMZD 4A3LC 2YU9K 4LK1A 2NVTK 2JA8C 1I50K 3GTLK 5TMFA 1TWFC 2PA8L 2WAQL 3HOYK 3PO3K 1R9TC 3M4OK 1BDFA 4LLGA 4A3BK 3S2DC 4QJVA 3DXJA 2O5IA 3I4NC 4C3HC 3PO2C 4MQ9A 4G7HA 1K83C 4A3EC 1XPPA 3S1QK 2A68A 1I6HK 3HOXK 2R92K 2R93K 4A93K 1TWAK 5IP9C 3RZDK 4BXXK 2R7ZC 3S1NC 2B63K 3GTPK 1TWGK 1YNNA 3GTMK 1SFOK 3M3YC 4C3IC 5FLMK 1HQMA 2JA5K 4BY1K 3S1MK 3S14K 5D4DA 4YFKA 2E2HC 4YFNA 3S2HC 1Y1VC 3GTGC 5C3EC 2E2JK 3WODA 1YNJA 4G7OA 5IYDK 3CQZC 2A6EA 4Q5SA 4A3MK 3GTKC 3S15K 4A3IK 1WCMC 4A3LK 3HKZL 3HOWC 2JA8K 4XSZA 2NVQC 2BE5A 2JA6C 1TWFK 4QJVB 4KMUA 3S16C 1R9TK 2JA7C 1SMYA 3S2DK 3I4NK 4C3HK 3H3VL 2WB1D 4KN4A 4A3JC 3PO2K 1K83K 4A3EK 4AYBL 4BY7C 3H0GC 1ZYRA 4A3CC 5M3FK 5FJ8K 2VUMC 4JK1A 4QIWL 2E2IC 2PMZL 2WAQD 5IP9K 4A3FC 2R7ZK 3S1NK 2A69A 3K7AC 3HOUC 3M3YK 4C3IK 3RZOC 5C4XC 2E2HK 3S2HK 1Y1VK 3GTJC 4LJZA 4YG2A 3S1RC 3EQLA 3GTQC 5C3EK 3GTGK 3HOZC 4X6AC 3CQZK 1TWHC 3GTKK 3S16K 4KN7A 2A6HA 1WCMK 5IYCC 4Y7NC 1Y1WC 2NVYC 2PPBA 5M5XK 3HOWK 4XLPA 2JA6K 2NVQK 5C4JC 3FKIC 4C2MC 3I4MC 2JA7K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3G C;  4A3K C;  4BBR C;  3S17 C;  4MEX A;  4Y52 C;  4A3J K;  2NVX C;  2Y0S D;  4BY7 K;  5C44 C;  3H0G K;  3HKZ D;  4A3C K;  4A3D C;  2VUM K;  4MEY A;  2E2I K;  2PA8 D;  4A3F K;  1I6V A;  4Q4Z A;  4C3J C;  4OIQ A;  3GTO C;  4OIO A;  3HOV C;  4G7Z A;  3K7A K;  3HOU K;  3RZO K;  1I3Q C;  5C4X K;  1TWC C;  4LK0 A;  4BBS C;  5IP7 C;  5IYB C;  4ZH4 A;  5IYD C;  2YU9 C;  2NVT C;  3GTJ K;  3S1R K;  3GTQ K;  1I50 C;  3GTL C;  3HOZ K;  4X6A K;  5M5Y K;  1TWH K;  3HOY C;  3PO3 C;  4A3B C;  3M4O C;  4OIR A;  5IYC K;  4GZY A;  4Y7N K;  1Y1W K;  2NVY K;  4NOI A;  5C4J K;  3FKI K;  4C2M K;  3S1Q C;  3I4M K;  1I6H C;  4A3G K;  3HOX C;  4A3K K;  2R92 C;  2R93 C;  4BBR K;  3S17 K;  4A93 C;  1TWA C;  3RZD C;  4Y52 K;  4BXX C;  3GTP C;  2B63 C;  2NVX K;  1TWG C;  5C44 K;  3GTM C;  2CW0 A;  1SFO C;  4A3D K;  5FLM C;  4XLN A;  2JA5 C;  4BY1 C;  3S1M C;  3S14 C;  5TMC A;  4XSX A;  4C3J K;  5M3M K;  3GTO K;  3HOV K;  2E2J C;  4OIN A;  3H3V D;  4OIP A;  4YFX A;  1I3Q K;  4AYB D;  3S15 C;  4A3M C;  2WB1 L;  1TWC K;  1IW7 A;  5M5W K;  2O5J A;  4A3I C;  4BBS K;  2Y0S L;  5IP7 K;  4QIW D;  5IYB K;  2PMZ D;  4A3L C;  2YU9 K;  4LK1 A;  2NVT K;  2JA8 C;  1I50 K;  3GTL K;  5TMF A;  1TWF C;  2PA8 L;  2WAQ L;  3HOY K;  3PO3 K;  1R9T C;  3M4O K;  1BDF A;  4LLG A;  4A3B K;  3S2D C;  4QJV A;  3DXJ A;  2O5I A;  3I4N C;  4C3H C;  3PO2 C;  4MQ9 A;  4G7H A;  1K83 C;  4A3E C;  1XPP A;  3S1Q K;  2A68 A;  1I6H K;  3HOX K;  2R92 K;  2R93 K;  4A93 K;  1TWA K;  5IP9 C;  3RZD K;  4BXX K;  2R7Z C;  3S1N C;  2B63 K;  3GTP K;  1TWG K;  1YNN A;  3GTM K;  1SFO K;  3M3Y C;  4C3I C;  5FLM K;  1HQM A;  2JA5 K;  4BY1 K;  3S1M K;  3S14 K;  5D4D A;  4YFK A;  2E2H C;  4YFN A;  3S2H C;  1Y1V C;  3GTG C;  5C3E C;  2E2J K;  3WOD A;  1YNJ A;  4G7O A;  5IYD K;  3CQZ C;  2A6E A;  4Q5S A;  4A3M K;  3GTK C;  3S15 K;  4A3I K;  1WCM C;  4A3L K;  3HKZ L;  3HOW C;  2JA8 K;  4XSZ A;  2NVQ C;  2BE5 A;  2JA6 C;  1TWF K;  4QJV B;  4KMU A;  3S16 C;  1R9T K;  2JA7 C;  1SMY A;  3S2D K;  3I4N K;  4C3H K;  3H3V L;  2WB1 D;  4KN4 A;  4A3J C;  3PO2 K;  1K83 K;  4A3E K;  4AYB L;  4BY7 C;  3H0G C;  1ZYR A;  4A3C C;  5M3F K;  5FJ8 K;  2VUM C;  4JK1 A;  4QIW L;  2E2I C;  2PMZ L;  2WAQ D;  5IP9 K;  4A3F C;  2R7Z K;  3S1N K;  2A69 A;  3K7A C;  3HOU C;  3M3Y K;  4C3I K;  3RZO C;  5C4X C;  2E2H K;  3S2H K;  1Y1V K;  3GTJ C;  4LJZ A;  4YG2 A;  3S1R C;  3EQL A;  3GTQ C;  5C3E K;  3GTG K;  3HOZ C;  4X6A C;  3CQZ K;  1TWH C;  3GTK K;  3S16 K;  4KN7 A;  2A6H A;  1WCM K;  5IYC C;  4Y7N C;  1Y1W C;  2NVY C;  2PPB A;  5M5X K;  3HOW K;  4XLP A;  2JA6 K;  2NVQ K;  5C4J C;  3FKI C;  4C2M C;  3I4M C;  2JA7 K; 
#chains in the Genus database with same CATH topology
 3S17 C;  3LAJ A;  4BY7 K;  5DM7 S;  1JQW A;  4LQY A;  4A3F K;  4Q4Z A;  4OIQ A;  4G7Z A;  2XCR B;  5C4X K;  3QX3 A;  5IYD C;  1XZQ B;  3GTL C;  4X6A K;  5M5Y K;  1TWH K;  3HOY C;  4A3B C;  2R93 A;  4OIR A;  4WJ4 A;  4GZY A;  1TWA A;  2JH3 A;  4NOI A;  1O2F B;  3LPX A;  3GTM A;  1WIH A;  3I4M K;  2R93 C;  3S17 K;  1O27 A;  1TWA C;  5JVG S;  3A8J A;  4U67 S;  3GTM C;  3JST A;  3AD8 C;  5CHP A;  4P9S A;  5HQH A;  2E2J C;  1F7V A;  2XCO A;  1R9T A;  4A3M C;  2WB1 L;  1WSR A;  2O5J A;  5IYD K;  4A3L C;  4GTD A;  4IOC S;  1O2B A;  3GTL K;  4WJ3 M;  2Y3P A;  3HOY K;  1R9T C;  4A3B K;  1BDF A;  3S2D C;  2E2I A;  1IBA A;  1WOR A;  2P5M A;  4G7H A;  1XPP A;  1L0W A;  3T01 A;  2A68 A;  1JOE A;  1BS2 A;  2R93 K;  1TWA K;  3GTJ A;  1YNN A;  3GTM K;  5EGH A;  3M3Y C;  4GTL A;  5D4D A;  2E2H C;  4PAA A;  1Y1W A;  5JVH S;  2E2J K;  1YNJ A;  4G7O A;  4WF9 S;  4A3M K;  2ZUF A;  3CAG A;  2GSO A;  4A3L K;  4KAS A;  4KAT A;  4QJV B;  4KB2 A;  3BUE A;  3H0G A;  2ZUE A;  1R9T K;  2VUM A;  3S2D K;  3GEI A;  5HL7 S;  1O29 A;  4IO9 S;  1PJ6 A;  2FQT A;  4A3J C;  1PJ7 A;  3H0G C;  4A3C C;  2VUM C;  1I3Q A;  1KQ4 A;  3GIR A;  3HOU C;  3M3Y K;  3RZO C;  2E2H K;  3TTG A;  3FKI A;  1ZVU A;  4KMD A;  5IYC C;  5M5X K;  5C4J C;  3FKI C;  4KM8 A;  2GAH C;  3ORE A;  4A3K C;  4BBR C;  2PHC B;  4KMA A;  4MEX A;  2JA5 A;  1O2A A;  4A3J K;  1UV7 A;  2NVX C;  3V4G A;  5C44 C;  3H0G K;  3HKZ D;  5TJ3 A;  4A3C K;  2VUM K;  3IPJ A;  4KAW X;  2YU9 A;  1IQ0 A;  4G0W A;  4RMF A;  3HOU K;  3RZO K;  1DD5 A;  3VA7 A;  1ISE A;  3DLL S;  4ZH4 A;  2YU9 C;  2RGR A;  3TFJ A;  1GE9 A;  4IOA S;  4WIL A;  3GDZ A;  1XZP B;  1EFW A;  5IYC K;  2ZJR S;  3GTP A;  2R7Z A;  3FOE A;  5C4J K;  3FKI K;  1TWG A;  1SFO A;  3HOX C;  4A3K K;  4BBR K;  3RZD C;  4FZB A;  3GTP C;  2NVX K;  1ZBS A;  1TWG C;  5C44 K;  4C45 A;  1SFO C;  4XLN A;  4GT9 A;  2KPU A;  1WCM A;  5TMC A;  4BLB A;  3T00 A;  3TFH A;  1IE0 A;  3H3V D;  4YFX A;  1EH1 A;  5M5W K;  2KXY A;  2YU9 K;  2JA8 C;  3LYW A;  3L4K A;  2WAQ L;  4GTF A;  2O5I A;  1VGX A;  4C3H C;  3Q3Q A;  3NUH A;  3HOX K;  5CJ9 A;  2GAG C;  3RZD K;  2GSN A;  3ERE D;  3GTP K;  1Y1V A;  2KQ1 A;  1TWG K;  1XXA A;  1FEU A;  1SFO K;  1EQR A;  1X31 C;  4PAB A;  1Y1V C;  1O26 A;  2JA6 A;  4P5A A;  4LR2 A;  2JA8 K;  2JA6 C;  2BE5 A;  4M1X A;  2CFA A;  1IL2 A;  5JFE A;  4C3H K;  3H3V L;  4KN4 A;  1O25 A;  4G0V A;  4JK1 A;  2E2I C;  1B4A A;  3G4A A;  3G4C A;  1J98 A;  1PJ5 A;  1WQG A;  3K7A C;  1Y1V K;  3GTJ C;  3S1R C;  1XZQ A;  2ZJQ S;  4KN7 A;  2A6H A;  4Y7N C;  4KMH A;  1Y1W C;  3N3Y A;  1VH2 A;  2JA6 K;  1C0A A;  4KAR A;  1ZXO A;  1INN A;  1DCH A;  1USM A;  4FM9 A;  2KWA A;  5IOQ A;  2Y0S D;  3GTO A;  4A3D C;  5L46 A;  4MEY A;  2E2I K;  1XXB A;  4LOW A;  1TWC A;  1F7U A;  1I6V A;  1J6V A;  4C3J C;  3GTO C;  1I50 A;  3K7A K;  1I3Q C;  1TWC C;  4LK0 A;  5IP7 C;  3GTJ K;  3S1R K;  1J6X A;  1I50 C;  3M4O C;  3BP3 A;  4Y7N K;  4DDQ A;  1Y1W K;  2V6U A;  3HXA A;  4P5B A;  4KDD A;  4WCE S;  4A93 C;  2L5N A;  1V5V A;  1VJE A;  4BXX C;  3GTG A;  3ADA C;  4A3D K;  4GTE A;  5FLM C;  2JA5 C;  5HL8 A;  3S1M C;  3GTK A;  3S14 C;  4GTA A;  4C3J K;  5M3M K;  3GTO K;  4J3N A;  1TWF A;  4OIP A;  1I3Q K;  3S15 C;  2JA7 A;  1TWC K;  1IW7 A;  3AD9 C;  4A3I C;  1G51 A;  2Y0S L;  5IP7 K;  1WOO A;  1WQF A;  3SZZ A;  4LK1 A;  1I50 K;  2V6S A;  1K83 A;  1TWF C;  3AH5 A;  3M4O K;  4LLG A;  4KM9 A;  5IOS A;  4QJV A;  3I4N C;  2L3U A;  1K83 C;  4A3E C;  1YCL A;  3LAP A;  2ZJP S;  4A93 K;  1RU0 A;  4BXX K;  2R7Z C;  3CQZ A;  4WFA S;  4C3I C;  1DCP A;  1TWH A;  5FLM K;  2JA5 K;  2D6F C;  3S1M K;  3OEP A;  3S14 K;  2FQO A;  4YFN A;  3N0C A;  3WOD A;  3CQZ C;  3S15 K;  1F9N A;  4A3I K;  1WCM C;  3HKZ L;  3HOW C;  2CFA B;  4XSZ A;  4AH6 A;  1TWF K;  1DCO A;  3S16 C;  3I4N K;  3PIO S;  2WB1 D;  1K83 K;  4A3E K;  1EK8 A;  3PIP S;  5FJ8 K;  1WOP A;  2R7Z K;  1BGW A;  2A69 A;  1WOS A;  1VLO A;  3GTQ A;  3GTL A;  1IS1 A;  4C3I K;  4WFB S;  4BLA A;  5JVO A;  1J6W A;  2NVY A;  4LJZ A;  4YG2 A;  3GTQ C;  3HOZ C;  1AB4 A;  1O28 A;  3CQZ K;  2RH6 A;  3GEH A;  1ZQ1 C;  1WCM K;  4GFQ A;  1O24 A;  4G0U A;  2NVY C;  3HOW K;  1XZP A;  2XCQ A;  4KC6 A;  4C2M C;  3L4J A;  3S16 K;  4A3G C;  4Y52 C;  4GTC A;  3FHZ A;  2ZFZ A;  2PA8 D;  3OPF A;  1F93 A;  3HOV C;  4OIO A;  4BKW A;  3GSI A;  4BBS C;  5IYB C;  2NVT C;  2GSU A;  3GTQ K;  3HOZ K;  3PO3 C;  2R92 A;  2NVY K;  2EBB A;  1WQH A;  4KB4 A;  2B63 A;  5DM6 S;  4C2M K;  3S1Q C;  3A8K A;  1I6H C;  4A3G K;  2R92 C;  3T02 A;  1JVI A;  2E2H A;  4Y52 K;  2B63 C;  5IOT A;  2CW0 A;  4BY1 C;  3A8I A;  4XSX A;  3HOV K;  4OIN A;  1VRQ C;  4AYB D;  4BBS K;  3SZY A;  5IYB K;  2NVT K;  4QIW D;  2PMZ D;  5EGE A;  5TMF A;  3CF5 S;  2PA8 L;  3PO3 K;  1WSV A;  1XXC A;  3DXJ A;  1YX2 A;  3PO2 C;  4MQ9 A;  1HI9 A;  3S0X A;  3S1Q K;  1I6H K;  2W7V A;  3AQP A;  2R92 K;  5IOR A;  5IP9 C;  3AQO A;  3S1N C;  1BJT A;  2B63 K;  1EI6 A;  4ILD A;  3AD7 C;  1HQM A;  4BY1 K;  4YFK A;  3S2H C;  2P8T A;  4XCH A;  3GTG C;  5C3E C;  2A6E A;  4Q5S A;  3GTK C;  4O2D A;  2NVQ C;  2NVX A;  4KMU A;  2JA7 C;  1USO A;  2V6T A;  1SMY A;  3PO2 K;  3GEE A;  4AYB L;  4BY7 C;  1ZYR A;  3FOF A;  5M3F K;  4QIW L;  2PMZ L;  1B4B A;  2WAQ D;  5IP9 K;  4A3F C;  3S1N K;  3MML B;  5C4X C;  3S2H K;  3GTG K;  5C3E K;  3EQL A;  4X6A C;  1TWH C;  5E68 A;  3TFI A;  3GTK K;  4WFN S;  3N0B A;  3BP8 C;  2PPB A;  4XLP A;  4GTB A;  2NVQ K;  3I4M C;  2JA7 K; 
#chains in the Genus database with same CATH homology
 4A3G C;  4A3K C;  4BBR C;  3S17 C;  4MEX A;  4Y52 C;  4A3J K;  2NVX C;  2Y0S D;  4BY7 K;  5C44 C;  3H0G K;  3HKZ D;  4A3C K;  4A3D C;  2VUM K;  4MEY A;  2E2I K;  2PA8 D;  4A3F K;  1I6V A;  4Q4Z A;  4C3J C;  4OIQ A;  3GTO C;  4OIO A;  3HOV C;  4G7Z A;  3K7A K;  3HOU K;  3RZO K;  1I3Q C;  5C4X K;  1TWC C;  4LK0 A;  4BBS C;  5IP7 C;  5IYB C;  4ZH4 A;  5IYD C;  2YU9 C;  2NVT C;  3GTJ K;  3S1R K;  3GTQ K;  1I50 C;  3GTL C;  3HOZ K;  4X6A K;  5M5Y K;  1TWH K;  3HOY C;  3PO3 C;  4A3B C;  3M4O C;  4OIR A;  5IYC K;  4GZY A;  4Y7N K;  1Y1W K;  2NVY K;  4NOI A;  5C4J K;  3FKI K;  4C2M K;  3S1Q C;  3I4M K;  1I6H C;  4A3G K;  3HOX C;  4A3K K;  2R92 C;  2R93 C;  4BBR K;  3S17 K;  4A93 C;  1TWA C;  3RZD C;  4Y52 K;  4BXX C;  3GTP C;  2B63 C;  2NVX K;  1TWG C;  5C44 K;  3GTM C;  2CW0 A;  1SFO C;  4A3D K;  5FLM C;  4XLN A;  2JA5 C;  4BY1 C;  3S1M C;  3S14 C;  5TMC A;  4XSX A;  4C3J K;  5M3M K;  3GTO K;  3HOV K;  2E2J C;  4OIN A;  3H3V D;  4OIP A;  4YFX A;  1I3Q K;  4AYB D;  3S15 C;  4A3M C;  2WB1 L;  1TWC K;  1IW7 A;  5M5W K;  2O5J A;  4A3I C;  4BBS K;  2Y0S L;  5IP7 K;  4QIW D;  5IYB K;  2PMZ D;  4A3L C;  2YU9 K;  4LK1 A;  2NVT K;  2JA8 C;  1I50 K;  3GTL K;  5TMF A;  1TWF C;  2PA8 L;  2WAQ L;  3HOY K;  3PO3 K;  1R9T C;  3M4O K;  1BDF A;  4LLG A;  4A3B K;  3S2D C;  4QJV A;  3DXJ A;  2O5I A;  3I4N C;  4C3H C;  3PO2 C;  4MQ9 A;  4G7H A;  1K83 C;  4A3E C;  1XPP A;  3S1Q K;  2A68 A;  1I6H K;  3HOX K;  2R92 K;  2R93 K;  4A93 K;  1TWA K;  5IP9 C;  3RZD K;  4BXX K;  2R7Z C;  3S1N C;  2B63 K;  3GTP K;  1TWG K;  1YNN A;  3GTM K;  1SFO K;  3M3Y C;  4C3I C;  5FLM K;  1HQM A;  2JA5 K;  4BY1 K;  3S1M K;  3S14 K;  5D4D A;  4YFK A;  2E2H C;  4YFN A;  3S2H C;  1Y1V C;  3GTG C;  5C3E C;  2E2J K;  3WOD A;  1YNJ A;  4G7O A;  5IYD K;  3CQZ C;  2A6E A;  4Q5S A;  4A3M K;  3GTK C;  3S15 K;  4A3I K;  1WCM C;  4A3L K;  3HKZ L;  3HOW C;  2JA8 K;  4XSZ A;  2NVQ C;  2BE5 A;  2JA6 C;  1TWF K;  4QJV B;  4KMU A;  3S16 C;  1R9T K;  2JA7 C;  1SMY A;  3S2D K;  3I4N K;  4C3H K;  3H3V L;  2WB1 D;  4KN4 A;  4A3J C;  3PO2 K;  1K83 K;  4A3E K;  4AYB L;  4BY7 C;  3H0G C;  1ZYR A;  4A3C C;  5M3F K;  5FJ8 K;  2VUM C;  4JK1 A;  4QIW L;  2E2I C;  2PMZ L;  2WAQ D;  5IP9 K;  4A3F C;  2R7Z K;  3S1N K;  2A69 A;  3K7A C;  3HOU C;  3M3Y K;  4C3I K;  3RZO C;  5C4X C;  2E2H K;  3S2H K;  1Y1V K;  3GTJ C;  4LJZ A;  4YG2 A;  3S1R C;  3EQL A;  3GTQ C;  5C3E K;  3GTG K;  3HOZ C;  4X6A C;  3CQZ K;  1TWH C;  3GTK K;  3S16 K;  4KN7 A;  2A6H A;  1WCM K;  5IYC C;  4Y7N C;  1Y1W C;  2NVY C;  2PPB A;  5M5X K;  3HOW K;  4XLP A;  2JA6 K;  2NVQ K;  5C4J C;  3FKI C;  4C2M C;  3I4M C;  2JA7 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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