3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
1YNNA 4A3EK 4Q4ZA 2NVYC 3CQZK 1WCMC 2E2HC 2JA6C 2A6EA 1I3QC 3S1NC 4A93C 3H0GK 2NVTK 1I6VA 5M5XK 2Y0SD 4A3LK 3PO2K 2PPBA 3RZOC 3H3VL 3EQLA 4NOIA 3M3YC 1BDFA 4QJVA 2R93K 4G7ZA 3HOXK 4G7OA 5FJ8K 4A3MC 5FLMK 4LJZA 1ZYRA 5IP9K 4OIRA 4BBRK 5M3MK 2JA7K 5D4DA 4KN7A 2BE5A 2A6HA 2PA8D 4KN4A 1Y1WC 3GTOC 4A3GC 1XPPA 3GTQK 1TWAC 5IP7C 4C3JK 3M4OK 3HOZK 2WAQD 3K7AC 4GZYA 1TWHC 2PMZD 4C2MC 4X6AK 3HOUK 4AYBD 4A3KC 5IYDK 4A3FK 4YG2A 4C3HC 5C3EC 1K83C 1TWFK 3GTGK 1SMYA 4LK1A 5C4XK 3I4MK 1I50C 5C4JC 5TMFA 3S1QC 5C44C 2JA5C 3S1MC 3S14K 2E2HK 3GTKK 2YU9K 4C3IC 3GTPK 1HQMA 4A93K 5IYBC 3GTJC 3HOVC 4Y7NK 4A3CC 4MQ9A 3GTLC 1SFOK 3RZDC 5M5WK 4LK0A 1I6HC 2O5IA 2JA8C 4BXXC 1TWGC 3HOWK 4OIOA 1R9TC 2Y0SL 3HOYC 2R92C 2NVQK 2VUMK 3GTOK 4YFNA 4G7HA 3FKIC 4Y52K 5IP7K 2NVXK 4A3BC 2E2IK 4YFXA 3K7AK 2B63C 3S17C 3GTMK 4A3KK 3PO3K 4LLGA 3S2HC 4A3IK 3S16C 2PA8L 4A3JK 2WB1D 3S1RK 3S2DK 4BY1C 5IYCK 4OINA 3H3VD 4OIPA 4A3EC 2O5JA 4A3DK 4XLPA 4BBSK 2WAQL 4QIWL 3CQZC 4JK1A 2PMZL 4XLNA 2NVYK 3H0GC 4QJVB 2NVTC 1WCMK 3PO2C 3S15C 2JA6K 1I3QK 5IYBK 1Y1VC 3S1NK 3GTLK 3HKZD 2R93C 3RZOK 3M3YK 5M3FK 1TWGK 5IP9C 2JA7C 4BY7C 2CW0A 3GTGC 4A3MK 3GTQC 3HOYK 4YFKA 3M4OC 4C3JC 4MEXA 1Y1WK 3HOZC 4A3GK 3DXJA 4XSXA 3I4NC 4XSZA 1TWAK 4X6AC 2R7ZC 3HOUC 3S17K 4ZH4A 4A3FC 1TWCC 1TWHK 4C2MK 1TWFC 3S16K 3WODA 2E2JC 4C3HK 5C3EK 3I4MC 5C4XC 1K83K 4BY7K 3S14C 3GTKC 1I50K 5C4JK 2YU9C 3GTPC 3S1QK 5C44K 2JA5K 3S1MK 4AYBL 2WB1L 4Y7NC 4A3LC 4C3IK 2A69A 1Y1VK 1SFOC 3S15K 5M5YK 3GTJK 3HOVK 4A3CK 1YNJA 3HOWC 3RZDK 3HOXC 5FLMC 1I6HK 2JA8K 5TMCA 4BXXK 2A68A 2NVQC 2VUMC 4BBRC 1R9TK 4Y52C 4Q5SA 3HKZL 2R92K 2NVXC 2E2IC 3FKIK 4QIWD 3I4NK 4MEYA 2R7ZK 4A3BK 3GTMC 3PO3C 4A3IC 5IYDC 1TWCK 2B63K 4A3JC 3S1RC 3S2DC 4KMUA 5IYCC 4OIQA 3S2HK 2E2JK 4A3DC 4BBSC 1IW7A 4BY1K
chains in the Genus database with same CATH superfamily
1EFWA 1YNNA 1EH1A 1DCPA 4PABA 2FQOA 1I6VA 2Y0SD 2PPBA 3RZOC 4NOIA 4FZBA 2R93K 2CFAA 3HOXK 2P5MA 4LJZA 5EGHA 2JA7K 1Y1WC 1V5VA 4WILA 4A3GC 3GTGK 4KN4A 5CJ9A 5IP7C 1VRQC 3GEIA 4KAWX 4C2MC 4X6AK 4M1XA 5IYDK 4AYBD 4A3KC 1ISEA 1TWFK 4AH6A 1USOA 2XCQA 1O29A 4Y7NK 2GSUA 4A3CC 4MQ9A 2ZFZA 3RZDC 5M5WK 1I6HC 2O5IA 4OIOA 2R92C 4IO9S 4G7HA 5L46A 5IP7K 3PIPS 2E2HA 3A8KA 1WOOA 2XCOA 3GDZA 4A3KK 1WOPA 3GTMK 4A3IK 2WB1D 4KM8A 3CQZC 4JK1A 2NVYK 3GTOA 1WCMK 3S1NK 3S15C 4GTBA 1I3QK 2NVXA 3HKZD 5TJ3A 1PJ7A 1X31C 3M3YK 2GAGC 1XZPA 4A3MK 1USMA 3GTQC 1BS2A 4GTAA 1XXCA 3HOZC 3DXJA 3I4NC 4XSZA 1TWAK 2JA6A 2R7ZC 3HOUC 1EK8A 3GTLA 2JH3A 4KM9A 1O2FB 1IQ0A 4LR2A 1TWGA 4WFNS 2JA5K 4AYBL 3S15K 4C3IK 2A69A 1SFOC 3A8JA 3FOFA 3HOVK 3GIRA 5IOQA 1L0WA 1YNJA 1TWHA 2GSOA 1EQRA 4P5BA 2EBBA 2KXYA 2JA8K 5TMCA 2NVQC 2ZUEA 1B4BA 1I50A 3AQOA 3FKIK 3T00A 3I4NK 1DCOA 3OPFA 2R7ZK 3PO3C 1Y1VA 2GAHC 4A3JC 3ADAC 3Q3QA 1IE0A 3S2HK 5IORA 3AD9C 3L4JA 2ZUFA 1VJEA 4A3EK 2D6FC 1G51A 1R9TA 3AD8C 4KC6A 3H0GK 3NUHA 2NVTK 2L5NA 1BDFA 1INNA 5IOTA 4G7OA 3LYWA 5JVGS 1B4AA 5IP9K 5JVHS 4BY7K 2BE5A 2A6HA 1XPPA 3M4OK 1BGWA 3N0CA 4GZYA 3ERED 4C3HC 1K83C 1VH2A 2R93A 4LK1A 5C4XK 5C4JC 4KMDA 3SZYA 2JA7A 1JVIA 3S14K 3LAJA 3AD7C 3GTGA 3GTKK 1AB4A 2YU9K 3GTPK 4KARA 1HQMA 1WOSA 3GTJC 1J6VA 1JOEA 1J6WA 3GEEA 4BXXC 1TWFA 2VUMK 4YFNA 3BP3A 4A3BC 2E2IK 2B63C 3S1RK 4BY1C 3H3VD 4OIPA 4A3DK 4BBSK 1O27A 2PMZL 1KQ4A 2CFAB 3PO2C 4PAAA 1O28A 1F9NA 2L3UA 3RZOK 3GTMA 1PJ5A 4XCHA 1F93A 3TFJA 2ZJPS 2CW0A 4YFKA 4C3JC 1Y1WK 4A3GK 2NVYA 4XSXA 3CF5S 1WCMA 1I3QA 4A3FC 1TWCC 4GTCA 4C2MK 4J3NA 3G4CA 3V4GA 4U67S 2E2JC 1YCLA 3I4MC 4BKWA 3T01A 3AQPA 1PJ6A 3IPJA 2PHCB 2V6TA 3TFIA 1TWAA 1C0AA 1JQWA 3OREA 3CAGA 4ILDA 4A3CK 3N0BA 3HOWC 1XXAA 3MMLB 4BLBA 3RZDK 4KDDA 1I6HK 2A68A 5HL7S 4Y52C 1IBAA 2R92K 2NVXC 2JA5A 4MEYA 1TWCK 3S2DC 5IYCC 2E2JK 4IOCS 3CQZK 2JA6C 4LOWA 2A6EA 2V6UA 4A93C 1ZVUA 4C45A 1XZPB 3FKIA 2R7ZA 4KATA 3H3VL 4DDQA 4QJVA 3A8IA 4FM9A 4P9SA 5FJ8K 5M3MK 5D4DA 3GTQK 2V6SA 3HOZK 3AH5A 3H0GA 1TWHC 2PMZD 3HOUK 1WQFA 5C3EC 1XXBA 1I50C 5TMFA 3S1QC 4KMHA 5C44C 3S1MC 5HL8A 4A93K 4RMFA 1SFOK 3FOEA 1R9TC 2RH6A 4WJ4A 3HOYC 4IOAS 2NVQK 1DCHA 3GTKA 2YU9A 3GTPA 4YFXA 3PO3K 3S16C 2PA8L 4A3JK 2P8TA 1ZBSA 4G0VA 4BLAA 2WAQL 3VA7A 2VUMA 2RGRA 4GTFA 3G4AA 2E2IA 1WQHA 2FQTA 1WIHA 2R93C 5M3FK 1RU0A 2JA7C 1ZQ1C 3FHZA 3GTGC 3HOYK 4X6AC 1UV7A 5JVOA 5E68A 1TWFC 3S16K 3LAPA 4C3HK 1K83K 4WCES 3HXAA 5C4JK 4WF9S 1Y1WA 3QX3A 4Y7NC 4A3LC 1GE9A 5M5YK 3GTJK 2B63A 1ZXOA 5FLMC 2KWAA 4BXXK 1VGXA 3N3YA 4BBRC 2Y3PA 4G0UA 4QIWD 4WFAS 4A3BK 3GTMC 1O26A 4KMAA 4A3IC 2B63K 4GT9A 4KMUA 1WQGA 1F7VA 3GSIA 1IW7A 4BY1K 5DM6S 4Q4ZA 2NVYC 5HQHA 1WCMC 2E2HC 3S1NC 1I3QC 4GTDA 2R92A 3TTGA 5M5XK 4A3LK 3S0XA 1F7UA 3PO2K 1VLOA 3EQLA 3M3YC 4GTEA 1TWCA 4G7ZA 4KB2A 4A3MC 5FLMK 1ZYRA 4OIRA 4BBRK 4KN7A 3GTOC 2PA8D 3CQZA 1TWAC 4C3JK 3L4KA 4LQYA 2WAQD 3K7AC 3PIOS 1IL2A 3GEHA 4A3FK 4YG2A 4WJ3M 4WFBS 1SMYA 3TFHA 3I4MK 3T02A 5CHPA 2JA5C 2E2HK 3GTQA 4C3IC 5IYBC 1O2AA 3HOVC 1IS1A 3GTLC 4LK0A 5EGEA 2JA8C 3HOWK 1TWGC 1WORA 2Y0SL 1J98A 3GTOK 3FKIC 4Y52K 1HI9A 2NVXK 3K7AK 3S17C 1EI6A 1SFOA 4LLGA 3S2HC 1O24A 2W7VA 3S2DK 5IYCK 4OINA 4A3EC 2O5JA 5DM7S 4XLPA 4G0WA 1FEUA 4QIWL 3BUEA 4O2DA 4XLNA 3H0GC 2KPUA 2NVTC 4QJVB 4KB4A 2JA6K 5IYBK 1WSVA 1Y1VC 4KASA 3GTLK 1DD5A 3OEPA 2ZJRS 1XZQA 3DLLS 2KQ1A 1TWGK 5IP9C 4BY7C 3M4OC 4MEXA 4GFQA 3SZZA 3S17K 4ZH4A 1TWHK 1BJTA 3WODA 5C3EK 5C4XC 3BP8C 1WSRA 3S14C 1O2BA 1XZQB 3GTKC 1I50K 2YU9C 3GTPC 3S1QK 5C44K 3S1MK 2GSNA 1O25A 2WB1L 1Y1VK 1YX2A 4P5AA 5JFEA 3HOXC 5IOSA 2ZJQS 1K83A 2VUMC 1R9TK 4Q5SA 3HKZL 3JSTA 2E2IC 4GTLA 5IYDC 3GTJA 3S1RC 3LPXA 4OIQA 1J6XA 4A3DC 4BBSC 2XCRB
chains in the Genus database with same CATH topology
1YNNA 4A3EK 4Q4ZA 2NVYC 3CQZK 1WCMC 2E2HC 2JA6C 2A6EA 1I3QC 3S1NC 4A93C 3H0GK 2NVTK 1I6VA 5M5XK 2Y0SD 4A3LK 3PO2K 2PPBA 3RZOC 3H3VL 3EQLA 4NOIA 3M3YC 1BDFA 4QJVA 2R93K 4G7ZA 3HOXK 4G7OA 5FJ8K 4A3MC 5FLMK 4LJZA 1ZYRA 5IP9K 4OIRA 4BBRK 5M3MK 2JA7K 5D4DA 4KN7A 2BE5A 2A6HA 2PA8D 4KN4A 1Y1WC 3GTOC 4A3GC 1XPPA 3GTQK 1TWAC 5IP7C 4C3JK 3M4OK 3HOZK 2WAQD 3K7AC 4GZYA 1TWHC 2PMZD 4C2MC 4X6AK 3HOUK 4AYBD 4A3KC 5IYDK 4A3FK 4YG2A 4C3HC 5C3EC 1K83C 1TWFK 3GTGK 1SMYA 4LK1A 5C4XK 3I4MK 1I50C 5C4JC 5TMFA 3S1QC 5C44C 2JA5C 3S1MC 3S14K 2E2HK 3GTKK 2YU9K 4C3IC 3GTPK 1HQMA 4A93K 5IYBC 3GTJC 3HOVC 4Y7NK 4A3CC 4MQ9A 3GTLC 1SFOK 3RZDC 5M5WK 4LK0A 1I6HC 2O5IA 2JA8C 4BXXC 1TWGC 3HOWK 4OIOA 1R9TC 2Y0SL 3HOYC 2R92C 2NVQK 2VUMK 3GTOK 4YFNA 4G7HA 3FKIC 4Y52K 5IP7K 2NVXK 4A3BC 2E2IK 4YFXA 3K7AK 2B63C 3S17C 3GTMK 4A3KK 3PO3K 4LLGA 3S2HC 4A3IK 3S16C 2PA8L 4A3JK 2WB1D 3S1RK 3S2DK 4BY1C 5IYCK 4OINA 3H3VD 4OIPA 4A3EC 2O5JA 4A3DK 4XLPA 4BBSK 2WAQL 4QIWL 3CQZC 4JK1A 2PMZL 4XLNA 2NVYK 3H0GC 4QJVB 2NVTC 1WCMK 3PO2C 3S15C 2JA6K 1I3QK 5IYBK 1Y1VC 3S1NK 3GTLK 3HKZD 2R93C 3RZOK 3M3YK 5M3FK 1TWGK 5IP9C 2JA7C 4BY7C 2CW0A 3GTGC 4A3MK 3GTQC 3HOYK 4YFKA 3M4OC 4C3JC 4MEXA 1Y1WK 3HOZC 4A3GK 3DXJA 4XSXA 3I4NC 4XSZA 1TWAK 4X6AC 2R7ZC 3HOUC 3S17K 4ZH4A 4A3FC 1TWCC 1TWHK 4C2MK 1TWFC 3S16K 3WODA 2E2JC 4C3HK 5C3EK 3I4MC 5C4XC 1K83K 4BY7K 3S14C 3GTKC 1I50K 5C4JK 2YU9C 3GTPC 3S1QK 5C44K 2JA5K 3S1MK 4AYBL 2WB1L 4Y7NC 4A3LC 4C3IK 2A69A 1Y1VK 1SFOC 3S15K 5M5YK 3GTJK 3HOVK 4A3CK 1YNJA 3HOWC 3RZDK 3HOXC 5FLMC 1I6HK 2JA8K 5TMCA 4BXXK 2A68A 2NVQC 2VUMC 4BBRC 1R9TK 4Y52C 4Q5SA 3HKZL 2R92K 2NVXC 2E2IC 3FKIK 4QIWD 3I4NK 4MEYA 2R7ZK 4A3BK 3GTMC 3PO3C 4A3IC 5IYDC 1TWCK 2B63K 4A3JC 3S1RC 3S2DC 4KMUA 5IYCC 4OIQA 3S2HK 2E2JK 4A3DC 4BBSC 1IW7A 4BY1K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YNN A;  4A3E K;  4Q4Z A;  2NVY C;  3CQZ K;  1WCM C;  2E2H C;  2JA6 C;  2A6E A;  1I3Q C;  3S1N C;  4A93 C;  3H0G K;  2NVT K;  1I6V A;  5M5X K;  2Y0S D;  4A3L K;  3PO2 K;  2PPB A;  3RZO C;  3H3V L;  3EQL A;  4NOI A;  3M3Y C;  1BDF A;  4QJV A;  2R93 K;  4G7Z A;  3HOX K;  4G7O A;  5FJ8 K;  4A3M C;  5FLM K;  4LJZ A;  1ZYR A;  5IP9 K;  4OIR A;  4BBR K;  5M3M K;  2JA7 K;  5D4D A;  4KN7 A;  2BE5 A;  2A6H A;  2PA8 D;  4KN4 A;  1Y1W C;  3GTO C;  4A3G C;  1XPP A;  3GTQ K;  1TWA C;  5IP7 C;  4C3J K;  3M4O K;  3HOZ K;  2WAQ D;  3K7A C;  4GZY A;  1TWH C;  2PMZ D;  4C2M C;  4X6A K;  3HOU K;  4AYB D;  4A3K C;  5IYD K;  4A3F K;  4YG2 A;  4C3H C;  5C3E C;  1K83 C;  1TWF K;  3GTG K;  1SMY A;  4LK1 A;  5C4X K;  3I4M K;  1I50 C;  5C4J C;  5TMF A;  3S1Q C;  5C44 C;  2JA5 C;  3S1M C;  3S14 K;  2E2H K;  3GTK K;  2YU9 K;  4C3I C;  3GTP K;  1HQM A;  4A93 K;  5IYB C;  3GTJ C;  3HOV C;  4Y7N K;  4A3C C;  4MQ9 A;  3GTL C;  1SFO K;  3RZD C;  5M5W K;  4LK0 A;  1I6H C;  2O5I A;  2JA8 C;  4BXX C;  1TWG C;  3HOW K;  4OIO A;  1R9T C;  2Y0S L;  3HOY C;  2R92 C;  2NVQ K;  2VUM K;  3GTO K;  4YFN A;  4G7H A;  3FKI C;  4Y52 K;  5IP7 K;  2NVX K;  4A3B C;  2E2I K;  4YFX A;  3K7A K;  2B63 C;  3S17 C;  3GTM K;  4A3K K;  3PO3 K;  4LLG A;  3S2H C;  4A3I K;  3S16 C;  2PA8 L;  4A3J K;  2WB1 D;  3S1R K;  3S2D K;  4BY1 C;  5IYC K;  4OIN A;  3H3V D;  4OIP A;  4A3E C;  2O5J A;  4A3D K;  4XLP A;  4BBS K;  2WAQ L;  4QIW L;  3CQZ C;  4JK1 A;  2PMZ L;  4XLN A;  2NVY K;  3H0G C;  4QJV B;  2NVT C;  1WCM K;  3PO2 C;  3S15 C;  2JA6 K;  1I3Q K;  5IYB K;  1Y1V C;  3S1N K;  3GTL K;  3HKZ D;  2R93 C;  3RZO K;  3M3Y K;  5M3F K;  1TWG K;  5IP9 C;  2JA7 C;  4BY7 C;  2CW0 A;  3GTG C;  4A3M K;  3GTQ C;  3HOY K;  4YFK A;  3M4O C;  4C3J C;  4MEX A;  1Y1W K;  3HOZ C;  4A3G K;  3DXJ A;  4XSX A;  3I4N C;  4XSZ A;  1TWA K;  4X6A C;  2R7Z C;  3HOU C;  3S17 K;  4ZH4 A;  4A3F C;  1TWC C;  1TWH K;  4C2M K;  1TWF C;  3S16 K;  3WOD A;  2E2J C;  4C3H K;  5C3E K;  3I4M C;  5C4X C;  1K83 K;  4BY7 K;  3S14 C;  3GTK C;  1I50 K;  5C4J K;  2YU9 C;  3GTP C;  3S1Q K;  5C44 K;  2JA5 K;  3S1M K;  4AYB L;  2WB1 L;  4Y7N C;  4A3L C;  4C3I K;  2A69 A;  1Y1V K;  1SFO C;  3S15 K;  5M5Y K;  3GTJ K;  3HOV K;  4A3C K;  1YNJ A;  3HOW C;  3RZD K;  3HOX C;  5FLM C;  1I6H K;  2JA8 K;  5TMC A;  4BXX K;  2A68 A;  2NVQ C;  2VUM C;  4BBR C;  1R9T K;  4Y52 C;  4Q5S A;  3HKZ L;  2R92 K;  2NVX C;  2E2I C;  3FKI K;  4QIW D;  3I4N K;  4MEY A;  2R7Z K;  4A3B K;  3GTM C;  3PO3 C;  4A3I C;  5IYD C;  1TWC K;  2B63 K;  4A3J C;  3S1R C;  3S2D C;  4KMU A;  5IYC C;  4OIQ A;  3S2H K;  2E2J K;  4A3D C;  4BBS C;  1IW7 A;  4BY1 K; 
#chains in the Genus database with same CATH topology
 1EFW A;  1YNN A;  1EH1 A;  1DCP A;  4PAB A;  2FQO A;  1I6V A;  2Y0S D;  2PPB A;  3RZO C;  4NOI A;  4FZB A;  2R93 K;  2CFA A;  3HOX K;  2P5M A;  4LJZ A;  5EGH A;  2JA7 K;  1Y1W C;  1V5V A;  4WIL A;  4A3G C;  3GTG K;  4KN4 A;  5CJ9 A;  5IP7 C;  1VRQ C;  3GEI A;  4KAW X;  4C2M C;  4X6A K;  4M1X A;  5IYD K;  4AYB D;  4A3K C;  1ISE A;  1TWF K;  4AH6 A;  1USO A;  2XCQ A;  1O29 A;  4Y7N K;  2GSU A;  4A3C C;  4MQ9 A;  2ZFZ A;  3RZD C;  5M5W K;  1I6H C;  2O5I A;  4OIO A;  2R92 C;  4IO9 S;  4G7H A;  5L46 A;  5IP7 K;  3PIP S;  2E2H A;  3A8K A;  1WOO A;  2XCO A;  3GDZ A;  4A3K K;  1WOP A;  3GTM K;  4A3I K;  2WB1 D;  4KM8 A;  3CQZ C;  4JK1 A;  2NVY K;  3GTO A;  1WCM K;  3S1N K;  3S15 C;  4GTB A;  1I3Q K;  2NVX A;  3HKZ D;  5TJ3 A;  1PJ7 A;  1X31 C;  3M3Y K;  2GAG C;  1XZP A;  4A3M K;  1USM A;  3GTQ C;  1BS2 A;  4GTA A;  1XXC A;  3HOZ C;  3DXJ A;  3I4N C;  4XSZ A;  1TWA K;  2JA6 A;  2R7Z C;  3HOU C;  1EK8 A;  3GTL A;  2JH3 A;  4KM9 A;  1O2F B;  1IQ0 A;  4LR2 A;  1TWG A;  4WFN S;  2JA5 K;  4AYB L;  3S15 K;  4C3I K;  2A69 A;  1SFO C;  3A8J A;  3FOF A;  3HOV K;  3GIR A;  5IOQ A;  1L0W A;  1YNJ A;  1TWH A;  2GSO A;  1EQR A;  4P5B A;  2EBB A;  2KXY A;  2JA8 K;  5TMC A;  2NVQ C;  2ZUE A;  1B4B A;  1I50 A;  3AQO A;  3FKI K;  3T00 A;  3I4N K;  1DCO A;  3OPF A;  2R7Z K;  3PO3 C;  1Y1V A;  2GAH C;  4A3J C;  3ADA C;  3Q3Q A;  1IE0 A;  3S2H K;  5IOR A;  3AD9 C;  3L4J A;  2ZUF A;  1VJE A;  4A3E K;  2D6F C;  1G51 A;  1R9T A;  3AD8 C;  4KC6 A;  3H0G K;  3NUH A;  2NVT K;  2L5N A;  1BDF A;  1INN A;  5IOT A;  4G7O A;  3LYW A;  5JVG S;  1B4A A;  5IP9 K;  5JVH S;  4BY7 K;  2BE5 A;  2A6H A;  1XPP A;  3M4O K;  1BGW A;  3N0C A;  4GZY A;  3ERE D;  4C3H C;  1K83 C;  1VH2 A;  2R93 A;  4LK1 A;  5C4X K;  5C4J C;  4KMD A;  3SZY A;  2JA7 A;  1JVI A;  3S14 K;  3LAJ A;  3AD7 C;  3GTG A;  3GTK K;  1AB4 A;  2YU9 K;  3GTP K;  4KAR A;  1HQM A;  1WOS A;  3GTJ C;  1J6V A;  1JOE A;  1J6W A;  3GEE A;  4BXX C;  1TWF A;  2VUM K;  4YFN A;  3BP3 A;  4A3B C;  2E2I K;  2B63 C;  3S1R K;  4BY1 C;  3H3V D;  4OIP A;  4A3D K;  4BBS K;  1O27 A;  2PMZ L;  1KQ4 A;  2CFA B;  3PO2 C;  4PAA A;  1O28 A;  1F9N A;  2L3U A;  3RZO K;  3GTM A;  1PJ5 A;  4XCH A;  1F93 A;  3TFJ A;  2ZJP S;  2CW0 A;  4YFK A;  4C3J C;  1Y1W K;  4A3G K;  2NVY A;  4XSX A;  3CF5 S;  1WCM A;  1I3Q A;  4A3F C;  1TWC C;  4GTC A;  4C2M K;  4J3N A;  3G4C A;  3V4G A;  4U67 S;  2E2J C;  1YCL A;  3I4M C;  4BKW A;  3T01 A;  3AQP A;  1PJ6 A;  3IPJ A;  2PHC B;  2V6T A;  3TFI A;  1TWA A;  1C0A A;  1JQW A;  3ORE A;  3CAG A;  4ILD A;  4A3C K;  3N0B A;  3HOW C;  1XXA A;  3MML B;  4BLB A;  3RZD K;  4KDD A;  1I6H K;  2A68 A;  5HL7 S;  4Y52 C;  1IBA A;  2R92 K;  2NVX C;  2JA5 A;  4MEY A;  1TWC K;  3S2D C;  5IYC C;  2E2J K;  4IOC S;  3CQZ K;  2JA6 C;  4LOW A;  2A6E A;  2V6U A;  4A93 C;  1ZVU A;  4C45 A;  1XZP B;  3FKI A;  2R7Z A;  4KAT A;  3H3V L;  4DDQ A;  4QJV A;  3A8I A;  4FM9 A;  4P9S A;  5FJ8 K;  5M3M K;  5D4D A;  3GTQ K;  2V6S A;  3HOZ K;  3AH5 A;  3H0G A;  1TWH C;  2PMZ D;  3HOU K;  1WQF A;  5C3E C;  1XXB A;  1I50 C;  5TMF A;  3S1Q C;  4KMH A;  5C44 C;  3S1M C;  5HL8 A;  4A93 K;  4RMF A;  1SFO K;  3FOE A;  1R9T C;  2RH6 A;  4WJ4 A;  3HOY C;  4IOA S;  2NVQ K;  1DCH A;  3GTK A;  2YU9 A;  3GTP A;  4YFX A;  3PO3 K;  3S16 C;  2PA8 L;  4A3J K;  2P8T A;  1ZBS A;  4G0V A;  4BLA A;  2WAQ L;  3VA7 A;  2VUM A;  2RGR A;  4GTF A;  3G4A A;  2E2I A;  1WQH A;  2FQT A;  1WIH A;  2R93 C;  5M3F K;  1RU0 A;  2JA7 C;  1ZQ1 C;  3FHZ A;  3GTG C;  3HOY K;  4X6A C;  1UV7 A;  5JVO A;  5E68 A;  1TWF C;  3S16 K;  3LAP A;  4C3H K;  1K83 K;  4WCE S;  3HXA A;  5C4J K;  4WF9 S;  1Y1W A;  3QX3 A;  4Y7N C;  4A3L C;  1GE9 A;  5M5Y K;  3GTJ K;  2B63 A;  1ZXO A;  5FLM C;  2KWA A;  4BXX K;  1VGX A;  3N3Y A;  4BBR C;  2Y3P A;  4G0U A;  4QIW D;  4WFA S;  4A3B K;  3GTM C;  1O26 A;  4KMA A;  4A3I C;  2B63 K;  4GT9 A;  4KMU A;  1WQG A;  1F7V A;  3GSI A;  1IW7 A;  4BY1 K;  5DM6 S;  4Q4Z A;  2NVY C;  5HQH A;  1WCM C;  2E2H C;  3S1N C;  1I3Q C;  4GTD A;  2R92 A;  3TTG A;  5M5X K;  4A3L K;  3S0X A;  1F7U A;  3PO2 K;  1VLO A;  3EQL A;  3M3Y C;  4GTE A;  1TWC A;  4G7Z A;  4KB2 A;  4A3M C;  5FLM K;  1ZYR A;  4OIR A;  4BBR K;  4KN7 A;  3GTO C;  2PA8 D;  3CQZ A;  1TWA C;  4C3J K;  3L4K A;  4LQY A;  2WAQ D;  3K7A C;  3PIO S;  1IL2 A;  3GEH A;  4A3F K;  4YG2 A;  4WJ3 M;  4WFB S;  1SMY A;  3TFH A;  3I4M K;  3T02 A;  5CHP A;  2JA5 C;  2E2H K;  3GTQ A;  4C3I C;  5IYB C;  1O2A A;  3HOV C;  1IS1 A;  3GTL C;  4LK0 A;  5EGE A;  2JA8 C;  3HOW K;  1TWG C;  1WOR A;  2Y0S L;  1J98 A;  3GTO K;  3FKI C;  4Y52 K;  1HI9 A;  2NVX K;  3K7A K;  3S17 C;  1EI6 A;  1SFO A;  4LLG A;  3S2H C;  1O24 A;  2W7V A;  3S2D K;  5IYC K;  4OIN A;  4A3E C;  2O5J A;  5DM7 S;  4XLP A;  4G0W A;  1FEU A;  4QIW L;  3BUE A;  4O2D A;  4XLN A;  3H0G C;  2KPU A;  2NVT C;  4QJV B;  4KB4 A;  2JA6 K;  5IYB K;  1WSV A;  1Y1V C;  4KAS A;  3GTL K;  1DD5 A;  3OEP A;  2ZJR S;  1XZQ A;  3DLL S;  2KQ1 A;  1TWG K;  5IP9 C;  4BY7 C;  3M4O C;  4MEX A;  4GFQ A;  3SZZ A;  3S17 K;  4ZH4 A;  1TWH K;  1BJT A;  3WOD A;  5C3E K;  5C4X C;  3BP8 C;  1WSR A;  3S14 C;  1O2B A;  1XZQ B;  3GTK C;  1I50 K;  2YU9 C;  3GTP C;  3S1Q K;  5C44 K;  3S1M K;  2GSN A;  1O25 A;  2WB1 L;  1Y1V K;  1YX2 A;  4P5A A;  5JFE A;  3HOX C;  5IOS A;  2ZJQ S;  1K83 A;  2VUM C;  1R9T K;  4Q5S A;  3HKZ L;  3JST A;  2E2I C;  4GTL A;  5IYD C;  3GTJ A;  3S1R C;  3LPX A;  4OIQ A;  1J6X A;  4A3D C;  4BBS C;  2XCR B; 
#chains in the Genus database with same CATH homology
 1YNN A;  4A3E K;  4Q4Z A;  2NVY C;  3CQZ K;  1WCM C;  2E2H C;  2JA6 C;  2A6E A;  1I3Q C;  3S1N C;  4A93 C;  3H0G K;  2NVT K;  1I6V A;  5M5X K;  2Y0S D;  4A3L K;  3PO2 K;  2PPB A;  3RZO C;  3H3V L;  3EQL A;  4NOI A;  3M3Y C;  1BDF A;  4QJV A;  2R93 K;  4G7Z A;  3HOX K;  4G7O A;  5FJ8 K;  4A3M C;  5FLM K;  4LJZ A;  1ZYR A;  5IP9 K;  4OIR A;  4BBR K;  5M3M K;  2JA7 K;  5D4D A;  4KN7 A;  2BE5 A;  2A6H A;  2PA8 D;  4KN4 A;  1Y1W C;  3GTO C;  4A3G C;  1XPP A;  3GTQ K;  1TWA C;  5IP7 C;  4C3J K;  3M4O K;  3HOZ K;  2WAQ D;  3K7A C;  4GZY A;  1TWH C;  2PMZ D;  4C2M C;  4X6A K;  3HOU K;  4AYB D;  4A3K C;  5IYD K;  4A3F K;  4YG2 A;  4C3H C;  5C3E C;  1K83 C;  1TWF K;  3GTG K;  1SMY A;  4LK1 A;  5C4X K;  3I4M K;  1I50 C;  5C4J C;  5TMF A;  3S1Q C;  5C44 C;  2JA5 C;  3S1M C;  3S14 K;  2E2H K;  3GTK K;  2YU9 K;  4C3I C;  3GTP K;  1HQM A;  4A93 K;  5IYB C;  3GTJ C;  3HOV C;  4Y7N K;  4A3C C;  4MQ9 A;  3GTL C;  1SFO K;  3RZD C;  5M5W K;  4LK0 A;  1I6H C;  2O5I A;  2JA8 C;  4BXX C;  1TWG C;  3HOW K;  4OIO A;  1R9T C;  2Y0S L;  3HOY C;  2R92 C;  2NVQ K;  2VUM K;  3GTO K;  4YFN A;  4G7H A;  3FKI C;  4Y52 K;  5IP7 K;  2NVX K;  4A3B C;  2E2I K;  4YFX A;  3K7A K;  2B63 C;  3S17 C;  3GTM K;  4A3K K;  3PO3 K;  4LLG A;  3S2H C;  4A3I K;  3S16 C;  2PA8 L;  4A3J K;  2WB1 D;  3S1R K;  3S2D K;  4BY1 C;  5IYC K;  4OIN A;  3H3V D;  4OIP A;  4A3E C;  2O5J A;  4A3D K;  4XLP A;  4BBS K;  2WAQ L;  4QIW L;  3CQZ C;  4JK1 A;  2PMZ L;  4XLN A;  2NVY K;  3H0G C;  4QJV B;  2NVT C;  1WCM K;  3PO2 C;  3S15 C;  2JA6 K;  1I3Q K;  5IYB K;  1Y1V C;  3S1N K;  3GTL K;  3HKZ D;  2R93 C;  3RZO K;  3M3Y K;  5M3F K;  1TWG K;  5IP9 C;  2JA7 C;  4BY7 C;  2CW0 A;  3GTG C;  4A3M K;  3GTQ C;  3HOY K;  4YFK A;  3M4O C;  4C3J C;  4MEX A;  1Y1W K;  3HOZ C;  4A3G K;  3DXJ A;  4XSX A;  3I4N C;  4XSZ A;  1TWA K;  4X6A C;  2R7Z C;  3HOU C;  3S17 K;  4ZH4 A;  4A3F C;  1TWC C;  1TWH K;  4C2M K;  1TWF C;  3S16 K;  3WOD A;  2E2J C;  4C3H K;  5C3E K;  3I4M C;  5C4X C;  1K83 K;  4BY7 K;  3S14 C;  3GTK C;  1I50 K;  5C4J K;  2YU9 C;  3GTP C;  3S1Q K;  5C44 K;  2JA5 K;  3S1M K;  4AYB L;  2WB1 L;  4Y7N C;  4A3L C;  4C3I K;  2A69 A;  1Y1V K;  1SFO C;  3S15 K;  5M5Y K;  3GTJ K;  3HOV K;  4A3C K;  1YNJ A;  3HOW C;  3RZD K;  3HOX C;  5FLM C;  1I6H K;  2JA8 K;  5TMC A;  4BXX K;  2A68 A;  2NVQ C;  2VUM C;  4BBR C;  1R9T K;  4Y52 C;  4Q5S A;  3HKZ L;  2R92 K;  2NVX C;  2E2I C;  3FKI K;  4QIW D;  3I4N K;  4MEY A;  2R7Z K;  4A3B K;  3GTM C;  3PO3 C;  4A3I C;  5IYD C;  1TWC K;  2B63 K;  4A3J C;  3S1R C;  3S2D C;  4KMU A;  5IYC C;  4OIQ A;  3S2H K;  2E2J K;  4A3D C;  4BBS C;  1IW7 A;  4BY1 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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