3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
3HOXC 4Q5SA 2R93C 3HOWC 4Y52K 4YFKA 2NVYK 5IYDK 3PO3K 5M3MK 2CW0A 4G7OA 3GTQC 3GTJK 4A3IC 3HKZL 4A3BK 4A3IK 3GTKK 3RZOC 5FJ8K 3S2HC 5IYBK 3CQZC 5IP7C 1HQMA 3GTOC 4X6AC 3GTMK 1I3QC 3H3VD 1Y1WC 2PPBA 3GTGC 4C2MK 2JA8K 3S1MK 3M4OK 4A93K 1TWCC 1XPPA 4KMUA 4AYBD 2WAQL 4MEXA 3PO2K 4OINA 3S1RC 2JA7K 5TMCA 2NVQK 4A3BC 3S16K 2NVTC 1R9TK 3GTQK 4OIQA 3S14C 4BBRC 3S1QC 4NOIA 2NVYC 2JA6C 1I6HK 3RZDC 2E2JC 3HOXK 1TWHK 3K7AC 2VUMK 4A3GC 5C4XK 4A3DK 1Y1VK 2A6HA 4A3MC 1TWGC 4QJVB 4C3JK 5IYCK 4A3JK 4Y7NK 3S15K 2WB1L 3GTPC 1SMYA 4ZH4A 2A6EA 4A3JC 3I4NC 4LK0A 1K83C 2NVXK 3I4MK 2YU9C 4BY1K 2VUMC 4BY7K 5C3EC 4BY1C 2YU9K 2E2IC 3RZDK 2PMZD 2E2JK 2PA8L 3S14K 3HOUC 1I50K 2R7ZC 1R9TC 4AYBL 2NVTK 3S1NC 3GTLC 2PMZL 2Y0SD 3S15C 3S17C 5IYCC 4C3JC 2WB1D 4XLNA 4A3MK 3HKZD 3WODA 4A3FK 4XLPA 2JA5C 1Y1WK 2E2HC 4A3EC 3M3YK 5D4DA 1I3QK 1IW7A 5C44C 3HOVC 4BBSC 4C3IK 3GTOK 3CQZK 5IP7K 4A3CK 4QIWL 3S1QK 3S2DC 5IYBC 3S2HK 4GZYA 4A3GK 1YNJA 3GTKC 2A69A 3HOWK 4C3HK 1SFOC 5M5YK 2JA7C 2NVQC 3S1RK 4LK1A 2Y0SL 3S2DK 3PO3C 4A3LK 5M5XK 4Y52C 4XSXA 1TWCK 3DXJA 5IP9K 4A3EK 2E2HK 3GTJC 2JA8C 4C2MC 1WCMC 3M4OC 2JA5K 3GTGK 5IP9C 4MEYA 3GTMC 4A3LC 4X6AK 3S17K 3RZOK 1BDFA 2WAQD 5M3FK 4C3HC 1SFOK 3H3VL 3S1NK 2BE5A 2R7ZK 4BXXK 5C4JC 4OIRA 1TWAK 5TMFA 5M5WK 4YG2A 5IYDC 4A3CC 4C3IC 4G7HA 5C44K 3HOVK 2R93K 3M3YC 5C3EK 4Q4ZA 4OIOA 1YNNA 2R92C 4A3FC 2O5JA 2NVXC 5FLMC 4JK1A 1TWFC 3H0GC 4KN7A 4OIPA 4YFNA 2B63C 3FKIK 3HOZK 3GTPK 4MQ9A 3GTLK 4A3KC 2A68A 1I50C 3HOUK 2B63K 4QJVA 4YFXA 5FLMK 1Y1VC 4A3DC 2E2IK 3HOYC 4BBSK 4BY7C 1TWHC 4XSZA 4G7ZA 3HOYK 3I4MC 1I6HC 1K83K 2JA6K 4LJZA 3I4NK 4BBRK 1I6VA 1TWAC 3EQLA 5C4JK 2PA8D 4BXXC 1ZYRA 4A3KK 3S16C 4Y7NC 3PO2C 4LLGA 3FKIC 3HOZC 1TWFK 4A93C 3H0GK 1TWGK 3K7AK 2O5IA 5C4XC 2R92K 4KN4A 1WCMK 3S1MC 4QIWD
chains in the Genus database with same CATH superfamily
3HOXC 2ZFZA 3HOWC 4YFKA 3PO3K 1UV7A 1XZPB 3GTQC 3HKZL 5HL8A 4IOCS 2ZJPS 5FJ8K 4X6AC 4XCHA 4FZBA 3GTKA 1O25A 2D6FC 2FQOA 4MEXA 4OINA 1X31C 4A3BC 2NVTC 1R9TK 4BBRC 1TWFA 3H0GA 1PJ5A 4KASA 1TWHK 1IL2A 5JVGS 1Y1VK 2A6HA 2JA6A 3S15K 4U67S 3GTPC 4A3JC 4GTBA 2B63A 4GTCA 1XZQB 4WFBS 5C3EC 3GEHA 2YU9K 3GTLA 3RZDK 1O27A 1WORA 4AYBL 2ZJQS 3S1NC 1O28A 2KWAA 2P8TA 2R93A 4IOAS 3S17C 4C3JC 3AD9C 1TWAA 3WODA 4A3FK 2E2HC 4RMFA 1I3QK 1IW7A 4BBSC 1WQFA 3CQZK 5IP7K 4QIWL 3CF5S 3S2DC 5IYBC 1XXCA 4GZYA 2JA5A 3A8IA 3GTGA 2E2HA 1SFOC 4P5AA 1TWCA 2JA7C 1RU0A 2GAHC 5CJ9A 3S1RK 4KAWX 1ZVUA 1WCMC 3LYWA 3GTOA 3HXAA 3RZOK 1O26A 1SFOK 3H3VL 1F9NA 3LAJA 2BE5A 2R7ZK 5C4JC 1O2AA 4AH6A 4A3FC 1BGWA 4JK1A 3FKIK 1HI9A 3BUEA 1J98A 5CHPA 3ERED 4LQYA 2ZUFA 3L4KA 2JA6K 4BLBA 4O2DA 5C4JK 1Y1VA 4KMDA 3FHZA 2VUMA 1PJ6A 3PO2C 4LLGA 2FQTA 3AD8C 3AQOA 2R92K 4A93C 1WCMK 4WCES 4Q5SA 5EGEA 5L46A 5M3MK 2CW0A 4A3IC 1L0WA 4A3BK 3GEIA 5IYBK 3GTMA 4KM8A 2KQ1A 3CQZC 5IP7C 2XCRB 3OREA 1I3QC 3H3VD 1VJEA 3GTGC 4C2MK 3M4OK 1O24A 1TWCC 1XXBA 5TMCA 3S16K 3CAGA 3GTJA 2R92A 3GTQK 3QX3A 3FOEA 1TWGA 3S1QC 4LOWA 1ISEA 1I6HK 3RZDC 3HOXK 3A8JA 3K7AC 1VGXA 4A3GC 2P5MA 4A3DK 4A3MC 4J3NA 4A3JK 5IORA 4Y7NK 2A6EA 3I4NC 1DCHA 1VLOA 4BY1C 3GTPA 2PMZD 1EH1A 1I50K 1R9TC 5EGHA 3AH5A 1WQHA 2Y3PA 2NVTK 2PMZL 2Y0SD 2GSNA 5IYCC 4XLNA 5JVOA 2R7ZA 4A3EC 5C44C 2PHCB 3GEEA 5M5YK 2NVQC 1IBAA 3PO3C 1BJTA 4A3LK 3HOWK 3DXJA 1JVIA 2JA8C 5IOSA 2JA5K 5IP9C 3GTMC 1ZBSA 3T00A 4GTEA 3N0BA 5M3FK 4C3HC 4BXXK 1C0AA 1V5VA 4OIRA 5M5WK 5TMFA 4P9SA 5IYDC 1WOPA 4G7HA 2R93K 3M3YC 4P5BA 1YNNA 2NVXC 5FLMC 1TWFC 4KN7A 4OIPA 3HOZK 4YFNA 4MQ9A 3GTLK 4A3KC 1B4BA 3HOUK 2B63K 5HQHA 4YFXA 3Q3QA 2E2IK 4BY7C 3I4MC 1BS2A 1K83K 3EQLA 3ADAC 2PA8D 4A3KK 1EK8A 1EQRA 3HOZC 1TWFK 1TWGK 3GTQA 5C4XC 3S1MC 1YNJA 4QIWD 3GTJK 4WFAS 1IS1A 2R93C 4KARA 4Y52K 2JA7A 2NVYK 5IYDK 4KATA 4PAAA 3G4AA 4G7OA 4GTLA 1USMA 3GTKK 1YCLA 3S2HC 2L5NA 3GTOC 1HQMA 3GTMK 1Y1WC 2JA8K 3S1MK 1XPPA 4KMUA 2WAQL 2NVYA 2NVQK 1IE0A 1INNA 3S14C 2CFAB 1B4AA 4NOIA 5E68A 3N3YA 2E2JC 4G0WA 2GAGC 2VUMK 5TJ3A 4DDQA 4QJVB 5IYCK 3V4GA 1WSVA 2WB1L 2V6TA 4KMHA 2E2IA 4ZH4A 5JFEA 3S0XA 1WSRA 1WIHA 2NVXK 2XCQA 1DCOA 4BLAA 4BY1K 1F7VA 2V6SA 1IQ0A 3FKIA 1WQGA 2PA8L 1F7UA 2ZJRS 4KDDA 4GFQA 1G51A 1O2BA 4A3MK 3HKZD 3IPJA 4XLPA 2JA5C 1SFOA 5D4DA 3HOVC 4LR2A 4C3IK 4A3CK 3S1QK 2CFAA 3LAPA 4XSXA 1TWCK 3OEPA 4C45A 4A3EK 1J6VA 4C2MC 3M4OC 3GTGK 4KB2A 3JSTA 2RGRA 1Y1WA 2L3UA 2RH6A 1TWAK 1VRQC 4YG2A 1PJ7A 4A3CC 4C3IC 3HOVK 2R92C 3SZYA 1I50A 3PIOS 1KQ4A 1J6WA 3T01A 2YU9A 4KMAA 3DLLS 3MMLB 2A68A 2NVXA 4ILDA 5HL7S 2JH3A 4A3DC 2XCOA 1USOA 3GDZA 1I6HC 1ZQ1C 3G4CA 4LJZA 1I6VA 1TWAC 4FM9A 3N0CA 3S16C 3BP3A 2EBBA 1JOEA 3FKIC 1WOSA 3SZZA 3T02A 2O5IA 2KXYA 1J6XA 1DD5A 4G0UA 3PIPS 5JVHS 4A3IK 3RZOC 4GT9A 3FOFA 4KM9A 2PPBA 4GTDA 4A93K 3VA7A 1WOOA 4AYBD 3PO2K 3L4JA 3S1RC 2JA7K 1AB4A 3A8KA 1WCMA 5IOTA 1EI6A 4OIQA 4IO9S 4GTAA 5DM7S 4PABA 2NVYC 2JA6C 1F93A 1FEUA 5C4XK 1TWGC 4C3JK 1K83A 5IOQA 3GSIA 1SMYA 4LK0A 1K83C 1YX2A 2W7VA 3I4MK 4WJ3M 2YU9C 2VUMC 4BY7K 4G0VA 1JQWA 2E2IC 3BP8C 2E2JK 3GIRA 3S14K 3HOUC 2R7ZC 1XZQA 3AQPA 3GTLC 3AD7C 3S15C 1O2FB 4WFNS 2WB1D 1ZXOA 2GSOA 4WF9S 4WILA 1Y1WK 3TFIA 3M3YK 3GTOK 4KC6A 2V6UA 4BKWA 3S2HK 3GTKC 3NUHA 2A69A 3TFHA 4C3HK 4LK1A 2Y0SL 3S2DK 2KPUA 5DM6S 5M5XK 4Y52C 4BBSK 5IP9K 2E2HK 3GTJC 4MEYA 4X6AK 4A3LC 3CQZA 3TTGA 3S17K 1I3QA 1BDFA 2WAQD 3S1NK 3TFJA 2ZUEA 4WJ4A 5C44K 5C3EK 4Q4ZA 4OIOA 2GSUA 2O5JA 1XZPA 3H0GC 2B63C 4KB4A 3GTPK 4M1XA 1I50C 1DCPA 4QJVA 4GTFA 5FLMK 1XXAA 1Y1VC 3LPXA 3HOYC 3OPFA 1O29A 1TWHC 4XSZA 4G7ZA 3HOYK 1GE9A 3I4NK 4BBRK 4BXXC 1ZYRA 1TWHA 4Y7NC 3H0GK 1VH2A 1EFWA 4A3GK 1R9TA 4KN4A 3K7AK
chains in the Genus database with same CATH topology
3HOXC 4Q5SA 2R93C 3HOWC 4Y52K 4YFKA 2NVYK 5IYDK 3PO3K 5M3MK 2CW0A 4G7OA 3GTQC 3GTJK 4A3IC 3HKZL 4A3BK 4A3IK 3GTKK 3RZOC 5FJ8K 3S2HC 5IYBK 3CQZC 5IP7C 1HQMA 3GTOC 4X6AC 3GTMK 1I3QC 3H3VD 1Y1WC 2PPBA 3GTGC 4C2MK 2JA8K 3S1MK 3M4OK 4A93K 1TWCC 1XPPA 4KMUA 4AYBD 2WAQL 4MEXA 3PO2K 4OINA 3S1RC 2JA7K 5TMCA 2NVQK 4A3BC 3S16K 2NVTC 1R9TK 3GTQK 4OIQA 3S14C 4BBRC 3S1QC 4NOIA 2NVYC 2JA6C 1I6HK 3RZDC 2E2JC 3HOXK 1TWHK 3K7AC 2VUMK 4A3GC 5C4XK 4A3DK 1Y1VK 2A6HA 4A3MC 1TWGC 4QJVB 4C3JK 5IYCK 4A3JK 4Y7NK 3S15K 2WB1L 3GTPC 1SMYA 4ZH4A 2A6EA 4A3JC 3I4NC 4LK0A 1K83C 2NVXK 3I4MK 2YU9C 4BY1K 2VUMC 4BY7K 5C3EC 4BY1C 2YU9K 2E2IC 3RZDK 2PMZD 2E2JK 2PA8L 3S14K 3HOUC 1I50K 2R7ZC 1R9TC 4AYBL 2NVTK 3S1NC 3GTLC 2PMZL 2Y0SD 3S15C 3S17C 5IYCC 4C3JC 2WB1D 4XLNA 4A3MK 3HKZD 3WODA 4A3FK 4XLPA 2JA5C 1Y1WK 2E2HC 4A3EC 3M3YK 5D4DA 1I3QK 1IW7A 5C44C 3HOVC 4BBSC 4C3IK 3GTOK 3CQZK 5IP7K 4A3CK 4QIWL 3S1QK 3S2DC 5IYBC 3S2HK 4GZYA 4A3GK 1YNJA 3GTKC 2A69A 3HOWK 4C3HK 1SFOC 5M5YK 2JA7C 2NVQC 3S1RK 4LK1A 2Y0SL 3S2DK 3PO3C 4A3LK 5M5XK 4Y52C 4XSXA 1TWCK 3DXJA 5IP9K 4A3EK 2E2HK 3GTJC 2JA8C 4C2MC 1WCMC 3M4OC 2JA5K 3GTGK 5IP9C 4MEYA 3GTMC 4A3LC 4X6AK 3S17K 3RZOK 1BDFA 2WAQD 5M3FK 4C3HC 1SFOK 3H3VL 3S1NK 2BE5A 2R7ZK 4BXXK 5C4JC 4OIRA 1TWAK 5TMFA 5M5WK 4YG2A 5IYDC 4A3CC 4C3IC 4G7HA 5C44K 3HOVK 2R93K 3M3YC 5C3EK 4Q4ZA 4OIOA 1YNNA 2R92C 4A3FC 2O5JA 2NVXC 5FLMC 4JK1A 1TWFC 3H0GC 4KN7A 4OIPA 4YFNA 2B63C 3FKIK 3HOZK 3GTPK 4MQ9A 3GTLK 4A3KC 2A68A 1I50C 3HOUK 2B63K 4QJVA 4YFXA 5FLMK 1Y1VC 4A3DC 2E2IK 3HOYC 4BBSK 4BY7C 1TWHC 4XSZA 4G7ZA 3HOYK 3I4MC 1I6HC 1K83K 2JA6K 4LJZA 3I4NK 4BBRK 1I6VA 1TWAC 3EQLA 5C4JK 2PA8D 4BXXC 1ZYRA 4A3KK 3S16C 4Y7NC 3PO2C 4LLGA 3FKIC 3HOZC 1TWFK 4A93C 3H0GK 1TWGK 3K7AK 2O5IA 5C4XC 2R92K 4KN4A 1WCMK 3S1MC 4QIWD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOX C;  4Q5S A;  2R93 C;  3HOW C;  4Y52 K;  4YFK A;  2NVY K;  5IYD K;  3PO3 K;  5M3M K;  2CW0 A;  4G7O A;  3GTQ C;  3GTJ K;  4A3I C;  3HKZ L;  4A3B K;  4A3I K;  3GTK K;  3RZO C;  5FJ8 K;  3S2H C;  5IYB K;  3CQZ C;  5IP7 C;  1HQM A;  3GTO C;  4X6A C;  3GTM K;  1I3Q C;  3H3V D;  1Y1W C;  2PPB A;  3GTG C;  4C2M K;  2JA8 K;  3S1M K;  3M4O K;  4A93 K;  1TWC C;  1XPP A;  4KMU A;  4AYB D;  2WAQ L;  4MEX A;  3PO2 K;  4OIN A;  3S1R C;  2JA7 K;  5TMC A;  2NVQ K;  4A3B C;  3S16 K;  2NVT C;  1R9T K;  3GTQ K;  4OIQ A;  3S14 C;  4BBR C;  3S1Q C;  4NOI A;  2NVY C;  2JA6 C;  1I6H K;  3RZD C;  2E2J C;  3HOX K;  1TWH K;  3K7A C;  2VUM K;  4A3G C;  5C4X K;  4A3D K;  1Y1V K;  2A6H A;  4A3M C;  1TWG C;  4QJV B;  4C3J K;  5IYC K;  4A3J K;  4Y7N K;  3S15 K;  2WB1 L;  3GTP C;  1SMY A;  4ZH4 A;  2A6E A;  4A3J C;  3I4N C;  4LK0 A;  1K83 C;  2NVX K;  3I4M K;  2YU9 C;  4BY1 K;  2VUM C;  4BY7 K;  5C3E C;  4BY1 C;  2YU9 K;  2E2I C;  3RZD K;  2PMZ D;  2E2J K;  2PA8 L;  3S14 K;  3HOU C;  1I50 K;  2R7Z C;  1R9T C;  4AYB L;  2NVT K;  3S1N C;  3GTL C;  2PMZ L;  2Y0S D;  3S15 C;  3S17 C;  5IYC C;  4C3J C;  2WB1 D;  4XLN A;  4A3M K;  3HKZ D;  3WOD A;  4A3F K;  4XLP A;  2JA5 C;  1Y1W K;  2E2H C;  4A3E C;  3M3Y K;  5D4D A;  1I3Q K;  1IW7 A;  5C44 C;  3HOV C;  4BBS C;  4C3I K;  3GTO K;  3CQZ K;  5IP7 K;  4A3C K;  4QIW L;  3S1Q K;  3S2D C;  5IYB C;  3S2H K;  4GZY A;  4A3G K;  1YNJ A;  3GTK C;  2A69 A;  3HOW K;  4C3H K;  1SFO C;  5M5Y K;  2JA7 C;  2NVQ C;  3S1R K;  4LK1 A;  2Y0S L;  3S2D K;  3PO3 C;  4A3L K;  5M5X K;  4Y52 C;  4XSX A;  1TWC K;  3DXJ A;  5IP9 K;  4A3E K;  2E2H K;  3GTJ C;  2JA8 C;  4C2M C;  1WCM C;  3M4O C;  2JA5 K;  3GTG K;  5IP9 C;  4MEY A;  3GTM C;  4A3L C;  4X6A K;  3S17 K;  3RZO K;  1BDF A;  2WAQ D;  5M3F K;  4C3H C;  1SFO K;  3H3V L;  3S1N K;  2BE5 A;  2R7Z K;  4BXX K;  5C4J C;  4OIR A;  1TWA K;  5TMF A;  5M5W K;  4YG2 A;  5IYD C;  4A3C C;  4C3I C;  4G7H A;  5C44 K;  3HOV K;  2R93 K;  3M3Y C;  5C3E K;  4Q4Z A;  4OIO A;  1YNN A;  2R92 C;  4A3F C;  2O5J A;  2NVX C;  5FLM C;  4JK1 A;  1TWF C;  3H0G C;  4KN7 A;  4OIP A;  4YFN A;  2B63 C;  3FKI K;  3HOZ K;  3GTP K;  4MQ9 A;  3GTL K;  4A3K C;  2A68 A;  1I50 C;  3HOU K;  2B63 K;  4QJV A;  4YFX A;  5FLM K;  1Y1V C;  4A3D C;  2E2I K;  3HOY C;  4BBS K;  4BY7 C;  1TWH C;  4XSZ A;  4G7Z A;  3HOY K;  3I4M C;  1I6H C;  1K83 K;  2JA6 K;  4LJZ A;  3I4N K;  4BBR K;  1I6V A;  1TWA C;  3EQL A;  5C4J K;  2PA8 D;  4BXX C;  1ZYR A;  4A3K K;  3S16 C;  4Y7N C;  3PO2 C;  4LLG A;  3FKI C;  3HOZ C;  1TWF K;  4A93 C;  3H0G K;  1TWG K;  3K7A K;  2O5I A;  5C4X C;  2R92 K;  4KN4 A;  1WCM K;  3S1M C;  4QIW D; 
#chains in the Genus database with same CATH topology
 3HOX C;  2ZFZ A;  3HOW C;  4YFK A;  3PO3 K;  1UV7 A;  1XZP B;  3GTQ C;  3HKZ L;  5HL8 A;  4IOC S;  2ZJP S;  5FJ8 K;  4X6A C;  4XCH A;  4FZB A;  3GTK A;  1O25 A;  2D6F C;  2FQO A;  4MEX A;  4OIN A;  1X31 C;  4A3B C;  2NVT C;  1R9T K;  4BBR C;  1TWF A;  3H0G A;  1PJ5 A;  4KAS A;  1TWH K;  1IL2 A;  5JVG S;  1Y1V K;  2A6H A;  2JA6 A;  3S15 K;  4U67 S;  3GTP C;  4A3J C;  4GTB A;  2B63 A;  4GTC A;  1XZQ B;  4WFB S;  5C3E C;  3GEH A;  2YU9 K;  3GTL A;  3RZD K;  1O27 A;  1WOR A;  4AYB L;  2ZJQ S;  3S1N C;  1O28 A;  2KWA A;  2P8T A;  2R93 A;  4IOA S;  3S17 C;  4C3J C;  3AD9 C;  1TWA A;  3WOD A;  4A3F K;  2E2H C;  4RMF A;  1I3Q K;  1IW7 A;  4BBS C;  1WQF A;  3CQZ K;  5IP7 K;  4QIW L;  3CF5 S;  3S2D C;  5IYB C;  1XXC A;  4GZY A;  2JA5 A;  3A8I A;  3GTG A;  2E2H A;  1SFO C;  4P5A A;  1TWC A;  2JA7 C;  1RU0 A;  2GAH C;  5CJ9 A;  3S1R K;  4KAW X;  1ZVU A;  1WCM C;  3LYW A;  3GTO A;  3HXA A;  3RZO K;  1O26 A;  1SFO K;  3H3V L;  1F9N A;  3LAJ A;  2BE5 A;  2R7Z K;  5C4J C;  1O2A A;  4AH6 A;  4A3F C;  1BGW A;  4JK1 A;  3FKI K;  1HI9 A;  3BUE A;  1J98 A;  5CHP A;  3ERE D;  4LQY A;  2ZUF A;  3L4K A;  2JA6 K;  4BLB A;  4O2D A;  5C4J K;  1Y1V A;  4KMD A;  3FHZ A;  2VUM A;  1PJ6 A;  3PO2 C;  4LLG A;  2FQT A;  3AD8 C;  3AQO A;  2R92 K;  4A93 C;  1WCM K;  4WCE S;  4Q5S A;  5EGE A;  5L46 A;  5M3M K;  2CW0 A;  4A3I C;  1L0W A;  4A3B K;  3GEI A;  5IYB K;  3GTM A;  4KM8 A;  2KQ1 A;  3CQZ C;  5IP7 C;  2XCR B;  3ORE A;  1I3Q C;  3H3V D;  1VJE A;  3GTG C;  4C2M K;  3M4O K;  1O24 A;  1TWC C;  1XXB A;  5TMC A;  3S16 K;  3CAG A;  3GTJ A;  2R92 A;  3GTQ K;  3QX3 A;  3FOE A;  1TWG A;  3S1Q C;  4LOW A;  1ISE A;  1I6H K;  3RZD C;  3HOX K;  3A8J A;  3K7A C;  1VGX A;  4A3G C;  2P5M A;  4A3D K;  4A3M C;  4J3N A;  4A3J K;  5IOR A;  4Y7N K;  2A6E A;  3I4N C;  1DCH A;  1VLO A;  4BY1 C;  3GTP A;  2PMZ D;  1EH1 A;  1I50 K;  1R9T C;  5EGH A;  3AH5 A;  1WQH A;  2Y3P A;  2NVT K;  2PMZ L;  2Y0S D;  2GSN A;  5IYC C;  4XLN A;  5JVO A;  2R7Z A;  4A3E C;  5C44 C;  2PHC B;  3GEE A;  5M5Y K;  2NVQ C;  1IBA A;  3PO3 C;  1BJT A;  4A3L K;  3HOW K;  3DXJ A;  1JVI A;  2JA8 C;  5IOS A;  2JA5 K;  5IP9 C;  3GTM C;  1ZBS A;  3T00 A;  4GTE A;  3N0B A;  5M3F K;  4C3H C;  4BXX K;  1C0A A;  1V5V A;  4OIR A;  5M5W K;  5TMF A;  4P9S A;  5IYD C;  1WOP A;  4G7H A;  2R93 K;  3M3Y C;  4P5B A;  1YNN A;  2NVX C;  5FLM C;  1TWF C;  4KN7 A;  4OIP A;  3HOZ K;  4YFN A;  4MQ9 A;  3GTL K;  4A3K C;  1B4B A;  3HOU K;  2B63 K;  5HQH A;  4YFX A;  3Q3Q A;  2E2I K;  4BY7 C;  3I4M C;  1BS2 A;  1K83 K;  3EQL A;  3ADA C;  2PA8 D;  4A3K K;  1EK8 A;  1EQR A;  3HOZ C;  1TWF K;  1TWG K;  3GTQ A;  5C4X C;  3S1M C;  1YNJ A;  4QIW D;  3GTJ K;  4WFA S;  1IS1 A;  2R93 C;  4KAR A;  4Y52 K;  2JA7 A;  2NVY K;  5IYD K;  4KAT A;  4PAA A;  3G4A A;  4G7O A;  4GTL A;  1USM A;  3GTK K;  1YCL A;  3S2H C;  2L5N A;  3GTO C;  1HQM A;  3GTM K;  1Y1W C;  2JA8 K;  3S1M K;  1XPP A;  4KMU A;  2WAQ L;  2NVY A;  2NVQ K;  1IE0 A;  1INN A;  3S14 C;  2CFA B;  1B4A A;  4NOI A;  5E68 A;  3N3Y A;  2E2J C;  4G0W A;  2GAG C;  2VUM K;  5TJ3 A;  4DDQ A;  4QJV B;  5IYC K;  3V4G A;  1WSV A;  2WB1 L;  2V6T A;  4KMH A;  2E2I A;  4ZH4 A;  5JFE A;  3S0X A;  1WSR A;  1WIH A;  2NVX K;  2XCQ A;  1DCO A;  4BLA A;  4BY1 K;  1F7V A;  2V6S A;  1IQ0 A;  3FKI A;  1WQG A;  2PA8 L;  1F7U A;  2ZJR S;  4KDD A;  4GFQ A;  1G51 A;  1O2B A;  4A3M K;  3HKZ D;  3IPJ A;  4XLP A;  2JA5 C;  1SFO A;  5D4D A;  3HOV C;  4LR2 A;  4C3I K;  4A3C K;  3S1Q K;  2CFA A;  3LAP A;  4XSX A;  1TWC K;  3OEP A;  4C45 A;  4A3E K;  1J6V A;  4C2M C;  3M4O C;  3GTG K;  4KB2 A;  3JST A;  2RGR A;  1Y1W A;  2L3U A;  2RH6 A;  1TWA K;  1VRQ C;  4YG2 A;  1PJ7 A;  4A3C C;  4C3I C;  3HOV K;  2R92 C;  3SZY A;  1I50 A;  3PIO S;  1KQ4 A;  1J6W A;  3T01 A;  2YU9 A;  4KMA A;  3DLL S;  3MML B;  2A68 A;  2NVX A;  4ILD A;  5HL7 S;  2JH3 A;  4A3D C;  2XCO A;  1USO A;  3GDZ A;  1I6H C;  1ZQ1 C;  3G4C A;  4LJZ A;  1I6V A;  1TWA C;  4FM9 A;  3N0C A;  3S16 C;  3BP3 A;  2EBB A;  1JOE A;  3FKI C;  1WOS A;  3SZZ A;  3T02 A;  2O5I A;  2KXY A;  1J6X A;  1DD5 A;  4G0U A;  3PIP S;  5JVH S;  4A3I K;  3RZO C;  4GT9 A;  3FOF A;  4KM9 A;  2PPB A;  4GTD A;  4A93 K;  3VA7 A;  1WOO A;  4AYB D;  3PO2 K;  3L4J A;  3S1R C;  2JA7 K;  1AB4 A;  3A8K A;  1WCM A;  5IOT A;  1EI6 A;  4OIQ A;  4IO9 S;  4GTA A;  5DM7 S;  4PAB A;  2NVY C;  2JA6 C;  1F93 A;  1FEU A;  5C4X K;  1TWG C;  4C3J K;  1K83 A;  5IOQ A;  3GSI A;  1SMY A;  4LK0 A;  1K83 C;  1YX2 A;  2W7V A;  3I4M K;  4WJ3 M;  2YU9 C;  2VUM C;  4BY7 K;  4G0V A;  1JQW A;  2E2I C;  3BP8 C;  2E2J K;  3GIR A;  3S14 K;  3HOU C;  2R7Z C;  1XZQ A;  3AQP A;  3GTL C;  3AD7 C;  3S15 C;  1O2F B;  4WFN S;  2WB1 D;  1ZXO A;  2GSO A;  4WF9 S;  4WIL A;  1Y1W K;  3TFI A;  3M3Y K;  3GTO K;  4KC6 A;  2V6U A;  4BKW A;  3S2H K;  3GTK C;  3NUH A;  2A69 A;  3TFH A;  4C3H K;  4LK1 A;  2Y0S L;  3S2D K;  2KPU A;  5DM6 S;  5M5X K;  4Y52 C;  4BBS K;  5IP9 K;  2E2H K;  3GTJ C;  4MEY A;  4X6A K;  4A3L C;  3CQZ A;  3TTG A;  3S17 K;  1I3Q A;  1BDF A;  2WAQ D;  3S1N K;  3TFJ A;  2ZUE A;  4WJ4 A;  5C44 K;  5C3E K;  4Q4Z A;  4OIO A;  2GSU A;  2O5J A;  1XZP A;  3H0G C;  2B63 C;  4KB4 A;  3GTP K;  4M1X A;  1I50 C;  1DCP A;  4QJV A;  4GTF A;  5FLM K;  1XXA A;  1Y1V C;  3LPX A;  3HOY C;  3OPF A;  1O29 A;  1TWH C;  4XSZ A;  4G7Z A;  3HOY K;  1GE9 A;  3I4N K;  4BBR K;  4BXX C;  1ZYR A;  1TWH A;  4Y7N C;  3H0G K;  1VH2 A;  1EFW A;  4A3G K;  1R9T A;  4KN4 A;  3K7A K; 
#chains in the Genus database with same CATH homology
 3HOX C;  4Q5S A;  2R93 C;  3HOW C;  4Y52 K;  4YFK A;  2NVY K;  5IYD K;  3PO3 K;  5M3M K;  2CW0 A;  4G7O A;  3GTQ C;  3GTJ K;  4A3I C;  3HKZ L;  4A3B K;  4A3I K;  3GTK K;  3RZO C;  5FJ8 K;  3S2H C;  5IYB K;  3CQZ C;  5IP7 C;  1HQM A;  3GTO C;  4X6A C;  3GTM K;  1I3Q C;  3H3V D;  1Y1W C;  2PPB A;  3GTG C;  4C2M K;  2JA8 K;  3S1M K;  3M4O K;  4A93 K;  1TWC C;  1XPP A;  4KMU A;  4AYB D;  2WAQ L;  4MEX A;  3PO2 K;  4OIN A;  3S1R C;  2JA7 K;  5TMC A;  2NVQ K;  4A3B C;  3S16 K;  2NVT C;  1R9T K;  3GTQ K;  4OIQ A;  3S14 C;  4BBR C;  3S1Q C;  4NOI A;  2NVY C;  2JA6 C;  1I6H K;  3RZD C;  2E2J C;  3HOX K;  1TWH K;  3K7A C;  2VUM K;  4A3G C;  5C4X K;  4A3D K;  1Y1V K;  2A6H A;  4A3M C;  1TWG C;  4QJV B;  4C3J K;  5IYC K;  4A3J K;  4Y7N K;  3S15 K;  2WB1 L;  3GTP C;  1SMY A;  4ZH4 A;  2A6E A;  4A3J C;  3I4N C;  4LK0 A;  1K83 C;  2NVX K;  3I4M K;  2YU9 C;  4BY1 K;  2VUM C;  4BY7 K;  5C3E C;  4BY1 C;  2YU9 K;  2E2I C;  3RZD K;  2PMZ D;  2E2J K;  2PA8 L;  3S14 K;  3HOU C;  1I50 K;  2R7Z C;  1R9T C;  4AYB L;  2NVT K;  3S1N C;  3GTL C;  2PMZ L;  2Y0S D;  3S15 C;  3S17 C;  5IYC C;  4C3J C;  2WB1 D;  4XLN A;  4A3M K;  3HKZ D;  3WOD A;  4A3F K;  4XLP A;  2JA5 C;  1Y1W K;  2E2H C;  4A3E C;  3M3Y K;  5D4D A;  1I3Q K;  1IW7 A;  5C44 C;  3HOV C;  4BBS C;  4C3I K;  3GTO K;  3CQZ K;  5IP7 K;  4A3C K;  4QIW L;  3S1Q K;  3S2D C;  5IYB C;  3S2H K;  4GZY A;  4A3G K;  1YNJ A;  3GTK C;  2A69 A;  3HOW K;  4C3H K;  1SFO C;  5M5Y K;  2JA7 C;  2NVQ C;  3S1R K;  4LK1 A;  2Y0S L;  3S2D K;  3PO3 C;  4A3L K;  5M5X K;  4Y52 C;  4XSX A;  1TWC K;  3DXJ A;  5IP9 K;  4A3E K;  2E2H K;  3GTJ C;  2JA8 C;  4C2M C;  1WCM C;  3M4O C;  2JA5 K;  3GTG K;  5IP9 C;  4MEY A;  3GTM C;  4A3L C;  4X6A K;  3S17 K;  3RZO K;  1BDF A;  2WAQ D;  5M3F K;  4C3H C;  1SFO K;  3H3V L;  3S1N K;  2BE5 A;  2R7Z K;  4BXX K;  5C4J C;  4OIR A;  1TWA K;  5TMF A;  5M5W K;  4YG2 A;  5IYD C;  4A3C C;  4C3I C;  4G7H A;  5C44 K;  3HOV K;  2R93 K;  3M3Y C;  5C3E K;  4Q4Z A;  4OIO A;  1YNN A;  2R92 C;  4A3F C;  2O5J A;  2NVX C;  5FLM C;  4JK1 A;  1TWF C;  3H0G C;  4KN7 A;  4OIP A;  4YFN A;  2B63 C;  3FKI K;  3HOZ K;  3GTP K;  4MQ9 A;  3GTL K;  4A3K C;  2A68 A;  1I50 C;  3HOU K;  2B63 K;  4QJV A;  4YFX A;  5FLM K;  1Y1V C;  4A3D C;  2E2I K;  3HOY C;  4BBS K;  4BY7 C;  1TWH C;  4XSZ A;  4G7Z A;  3HOY K;  3I4M C;  1I6H C;  1K83 K;  2JA6 K;  4LJZ A;  3I4N K;  4BBR K;  1I6V A;  1TWA C;  3EQL A;  5C4J K;  2PA8 D;  4BXX C;  1ZYR A;  4A3K K;  3S16 C;  4Y7N C;  3PO2 C;  4LLG A;  3FKI C;  3HOZ C;  1TWF K;  4A93 C;  3H0G K;  1TWG K;  3K7A K;  2O5I A;  5C4X C;  2R92 K;  4KN4 A;  1WCM K;  3S1M C;  4QIW D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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