4XLNA

Crystal structure of t. aquaticus transcription initiation complex containing bubble promoter and rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
227
structure length
227
Chain Sequence
KAPVFTATTQGDHYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLDPKMASTTLILRAEGPKEVRAGDFTPSADVEIMNPDLHIATLEEGGKLYMEVRVDRGVGYVPAERHGIKDRINAIPVDAIFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVAILKEHLNYFANPEASLL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/dna/rna
molecule keywords DNA-directed RNA polymerase subunit alpha
publication title Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
pubmed doi rcsb
source organism Thermus aquaticus
total genus 41
structure length 227
sequence length 227
chains with identical sequence B, G, H
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2015-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4xlnA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4xlnA01
1TWGC 4GZYA 5FLMC 4XSXA 1Y1VC 3S1MC 3H0GK 3S17K 3S2DC 5C4JK 4X6AK 5C44C 2NVQC 5M3FK 2JA7K 5M5WK 1TWCK 3I4NC 3GTPK 4A3LC 2WB1D 3GTKK 4XSZA 3GTQC 3HOYC 4BXXC 3CQZC 4YFXA 5C4XC 2A6EA 4C3JC 3GTJC 3S16K 4BY7K 3GTMC 3S14K 3S1QK 2NVYK 4A3CC 2YU9C 3HOZK 1R9TK 4A93K 4KN7A 1TWGK 2R92K 2Y0SL 1TWHC 4BBRK 5C4JC 1Y1VK 5FLMK 2R93C 3S1MK 2JA7C 2JA8K 2PA8L 3S2DK 5C44K 2NVQK 3I4NK 4YG2A 3HKZD 2WAQD 1HQMA 4LJZA 2E2HC 2O5IA 3RZDK 3GTQK 4A3LK 4BXXK 3CQZK 3HOVC 3S14C 4C3JK 5C4XK 5TMFA 4KN4A 3GTJK 3GTMK 3GTOC 3H3VD 1WCMC 1R9TC 2BE5A 4G7OA 2YU9K 2R92C 4BBRC 2JA8C 1TWHK 5FJ8K 2R93K 4LK1A 2PMZD 1TWAC 4QIWD 3RZDC 2E2IC 4Y52C 2E2HK 1YNJA 3M3YC 1TWFC 3HOVK 2WB1L 4LK0A 4AYBL 3GTOK 4LLGA 1WCMK 4G7ZA 4A3IC 3S1NC 5IYCC 4MEXA 2R7ZC 4OIOA 4C3HC 3HOUC 4A3EC 1I6VA 3GTLC 1TWAK 3S15C 2E2IK 2A69A 4Y52K 4OINA 1YNNA 2JA6C 4BBSC 3GTGK 4KMUA 1Y1WC 4A3DC 3M3YK 4OIRA 1TWFK 3HKZL 2WAQL 4A3GK 5D4DA 2PPBA 3HOWC 3S1RC 4XLNA 4OIPA 4A3IK 3S1NK 2VUMC 3FKIC 5IYCK 4Y7NC 2R7ZK 2NVTC 4C2MC 1I3QK 4C3HK 5M5YK 4Q4ZA 3HOUK 4A3EK 4YFNA 3S2HC 2JA5C 5IP7K 2NVXC 3GTLK 3GTGC 4YFKA 3S15K 4BBSK 1Y1WK 2PMZL 1K83C 3HOZC 4A3GC 4A3MC 4QIWL 4G7HA 1XPPA 4A3DK 1SMYA 4NOIA 3HOWK 3WODA 5IYDC 3S1RK 4MQ9A 2VUMK 3FKIK 1I3QC 1ZYRA 5IP9C 4QJVB 4Y7NK 4A3JK 4C2MK 4C3IC 3K7AC 2NVTK 3EQLA 5C3EC 1I6HC 5IP7C 3HOXC 3S2HK 1BDFA 2JA5K 3PO3C 3RZOC 2NVXK 3I4MC 3H3VL 4A3FC 1SFOC 3DXJA 4BY1C 4A3BC 4Q5SA 2A68A 1K83K 2E2JK 4A3MK 3PO2C 2A6HA 4OIQA 2O5JA 5IYDK 4AYBD 4A3KC 4A3JC 4QJVA 5M3MK 5M5XK 4XLPA 1I50K 5IP9K 2Y0SD 2B63K 4C3IK 3K7AK 5C3EK 1I6HK 2CW0A 2PA8D 4ZH4A 3M4OC 5IYBK 3HOXK 2JA6K 3RZOK 4JK1A 3PO3K 3I4MK 3S17C 4A3FK 1SFOK 3H0GC 4X6AC 2E2JC 4BY1K 1IW7A 4MEYA 4A3BK 1TWCC 3GTPC 3GTKC 3PO2K 3HOYK 2B63C 3S16C 1I50C 4BY7C 4A3KK 3S1QC 5TMCA 5IYBC 2NVYC 4A93C 3M4OK 4A3CK
chains in the Genus database with same CATH superfamily
1DD5A 1USMA 3S17K 3H0GK 3S2DC 5C4JK 3GTKA 2NVQC 2JA7K 2ZJQS 3ADAC 3GTPK 3GTKK 4XSZA 3HOYC 3OEPA 4C45A 4C3JC 4BY7K 1WOPA 3HOZK 5FLMK 5C4JC 3S1MK 2R93C 2JA7C 2GSOA 1WQGA 3I4NK 4A3LK 3T00A 4J3NA 3RZDK 1WSRA 1BGWA 3GTJK 1O28A 2BE5A 2YU9K 3CAGA 5FJ8K 2E2HA 3TFJA 4LK1A 1EH1A 2E2IC 1O29A 3RZDC 4Y52C 2E2HK 3AQPA 3GTOA 2NVYA 3HOVK 1YCLA 1R9TA 1WQHA 1TWGA 3GTOK 4AYBL 1ZBSA 2ZUFA 1Y1VA 3GIRA 5IYCC 4OIOA 5IOTA 1XZPA 3GTGK 3GTMA 4GTEA 4WFAS 1O2AA 4OIRA 1AB4A 4WFNS 2PPBA 1PJ7A 3SZYA 4XLNA 4A3IK 2R7ZK 5M5YK 3L4JA 3S2HC 3AD8C 3GTGC 3S15K 2GSNA 4BBSK 1KQ4A 1Y1WK 4A3DK 1K83C 1VH2A 5IYDC 4MQ9A 4QJVB 2NVTK 1TWAA 3K7AC 4IO9S 5HL8A 1F93A 2JA5K 3PO3C 3RZOC 2GAGC 3I4MC 5E68A 4A3BC 2E2JK 2O5JA 4OIQA 4GTDA 4XLPA 3GTLA 4C3IK 1XXCA 2CW0A 4ZH4A 4IOCS 1HI9A 5IOQA 1SFOK 4BKWA 2E2JC 4KDDA 3N0CA 3LYWA 3FKIA 1WOSA 2NVXA 1ZXOA 1JVIA 1J6XA 5JVGS 1V5VA 4WFBS 4XSXA 4P5AA 4M1XA 5C44C 5M3FK 1IBAA 5M5WK 1TWCK 2WB1D 2FQOA 2B63A 3GTQC 4BXXC 1I50A 4PAAA 3CQZC 2A6EA 4KASA 2P5MA 4LR2A 3GEIA 5JVOA 1TWHC 4P9SA 2JA8K 3S2DK 1C0AA 2NVQK 3DLLS 2CFAA 4LJZA 1F9NA 2V6TA 4C3JK 5HQHA 1WCMC 4G7OA 2R93A 2JA7A 3AQOA 3GTPA 2JA8C 4GTFA 2R93K 1XZPB 2PMZD 2KXYA 1UV7A 1TWFC 2WB1L 4LK0A 4GTLA 5EGHA 4ILDA 1G51A 3S1NC 4MEXA 3LAPA 2RGRA 2E2IA 3ERED 4KMHA 2E2IK 4Y52K 3GTJA 3GEEA 2D6FC 4G0UA 1WSVA 4KB4A 2YU9A 2PHCB 1PJ6A 3S1RC 2W7VA 1IQ0A 4FZBA 2VUMC 5IYCK 4C2MC 2XCQA 3FOFA 1ZQ1C 1EQRA 2V6SA 4XCHA 1RU0A 5JVHS 2PMZL 4AH6A 4G7HA 1BS2A 1SMYA 1F7UA 4KC6A 3BP3A 3EQLA 1I6HC 3GTGA 1J6WA 3HOXC 3S2HK 1BDFA 1BJTA 4G0VA 5HL7S 2RH6A 2A68A 1K83K 3PO2C 2R7ZA 3NUHA 1VJEA 4BLAA 5IYDK 1DCHA 4A3KC 2ZUEA 3OPFA 1O2BA 5M5XK 1J98A 3K7AK 2PA8D 3M4OC 4KM8A 5IYBK 2JA6K 3RZOK 3PO3K 1Y1WA 3I4MK 5L46A 4X6AC 1O25A 1IW7A 4A3BK 4BLBA 4LQYA 4KARA 2KWAA 3S16C 2JA5A 1WQFA 3S1QC 5IYBC 2JA6C 2NVYC 4A93C 1TWGC 4GZYA 4LOWA 1Y1VC 4GTAA 2GSUA 2P8TA 1YX2A 1IE0A 2CFAB 1O24A 4YFXA 2V6UA 5C4XC 5EGEA 1WORA 1PJ5A 3GTMC 3S14K 2L5NA 1SFOA 3N0BA 4KN7A 1VGXA 3TFIA 2R92K 3FOEA 2PA8L 3PIPS 5C44K 1O27A 3HKZD 2WAQD 3CQZA 3GTQK 1WIHA 4BXXK 2JH3A 3CQZK 3VA7A 3S14C 5TMFA 4KN4A 3H3VD 5DM6S 1VLOA 1ZVUA 2R92C 1TWCA 1IS1A 1TWHK 3SZZA 1TWAC 4QIWD 1VRQC 3M3YC 1WCMA 4KAWX 4LLGA 1WCMK 4G7ZA 3LAJA 2FQTA 5TJ3A 4KATA 4C3HC 1O2FB 3HOUC 4A3EC 3A8JA 3GTLC 4WILA 2A69A 4OINA 1YNNA 1JOEA 3MMLB 3OREA 1TWFK 3HKZL 2WAQL 3HOWC 2KPUA 3BP8C 4OIPA 3S1NK 3FKIC 4Y7NC 4KM9A 1I3QK 2L3UA 4Q4ZA 1JQWA 4WF9S 2NVXC 1EI6A 3TTGA 3IPJA 4QIWL 4A3MC 1XPPA 4U67S 3G4AA 2EBBA 2VUMA 3S1RK 1X31C 1O26A 3G4CA 2VUMK 1I3QC 1ZYRA 5IP9C 1FEUA 4C2MK 3GEHA 5C3EC 1DCPA 4A3FC 4BY1C 4Q5SA 2A6HA 4AYBD 1XZQA 1USOA 5M3MK 2Y0SD 1I6HK 3HOXK 3S17C 3V4GA 3H0GC 4MEYA 4DDQA 3GTPC 2XCOA 3AD9C 3GTKC 3N3YA 4GFQA 5IOSA 3PO2K 5JFEA 3L4KA 2XCRB 4A3KK 4BY7C 5TMCA 3HOZC 3M4OK 4A3CK 1K83A 3JSTA 5FLMC 3S1MC 4X6AK 4RMFA 1DCOA 3I4NC 4A3LC 3CF5S 1WOOA 3A8IA 3S16K 3GTJC 2JA6A 3S1QK 2NVYK 4A3CC 2YU9C 1R9TK 4A93K 1TWGK 2Y0SL 4BBRK 1Y1VK 3T01A 3S0XA 1INNA 3AH5A 3BUEA 4YG2A 2E2HC 1HQMA 2O5IA 3HOVC 5C4XK 3GTMK 3GTOC 1R9TC 4BBRC 2ZJRS 1B4AA 4KB2A 4G0WA 3HXAA 5CJ9A 1EK8A 1YNJA 3A8KA 4IOAS 2Y3PA 2R92A 4WCES 2ZFZA 4A3IC 2R7ZC 3FHZA 3GTQA 1GE9A 1I6VA 1TWAK 3S15C 4WJ3M 4BBSC 4KMUA 1Y1WC 4A3DC 3M3YK 2ZJPS 1IL2A 4FM9A 4A3GK 5D4DA 1TWHA 3GDZA 3Q3QA 2NVTC 4WJ4A 1J6VA 4C3HK 3TFHA 4GTCA 3HOUK 4A3EK 4YFNA 2JA5C 5IP7K 1EFWA 3GTLK 4YFKA 1XXBA 5DM7S 4KMAA 4A3GC 3PIOS 1L0WA 3GSIA 4NOIA 3HOWK 3WODA 1ISEA 1XZQB 1XXAA 3FKIK 4Y7NK 3QX3A 4A3JK 4C3IC 5IP7C 4PABA 2NVXK 1TWFA 4O2DA 1SFOC 2GAHC 3DXJA 4A3MK 4GTBA 1F7VA 3LPXA 5CHPA 4KMDA 3AD7C 1I3QA 4GT9A 4A3JC 4QJVA 2B63K 3H3VL 1I50K 5IP9K 3T02A 5C3EK 5IORA 4JK1A 4A3FK 4BY1K 1TWCC 2KQ1A 4P5BA 1B4BA 3HOYK 2B63C 1I50C 3H0GA
chains in the Genus database with same CATH topology
1TWGC 4GZYA 5FLMC 4XSXA 1Y1VC 3S1MC 3H0GK 3S17K 3S2DC 5C4JK 4X6AK 5C44C 2NVQC 5M3FK 2JA7K 5M5WK 1TWCK 3I4NC 3GTPK 4A3LC 2WB1D 3GTKK 4XSZA 3GTQC 3HOYC 4BXXC 3CQZC 4YFXA 5C4XC 2A6EA 4C3JC 3GTJC 3S16K 4BY7K 3GTMC 3S14K 3S1QK 2NVYK 4A3CC 2YU9C 3HOZK 1R9TK 4A93K 4KN7A 1TWGK 2R92K 2Y0SL 1TWHC 4BBRK 5C4JC 1Y1VK 5FLMK 2R93C 3S1MK 2JA7C 2JA8K 2PA8L 3S2DK 5C44K 2NVQK 3I4NK 4YG2A 3HKZD 2WAQD 1HQMA 4LJZA 2E2HC 2O5IA 3RZDK 3GTQK 4A3LK 4BXXK 3CQZK 3HOVC 3S14C 4C3JK 5C4XK 5TMFA 4KN4A 3GTJK 3GTMK 3GTOC 3H3VD 1WCMC 1R9TC 2BE5A 4G7OA 2YU9K 2R92C 4BBRC 2JA8C 1TWHK 5FJ8K 2R93K 4LK1A 2PMZD 1TWAC 4QIWD 3RZDC 2E2IC 4Y52C 2E2HK 1YNJA 3M3YC 1TWFC 3HOVK 2WB1L 4LK0A 4AYBL 3GTOK 4LLGA 1WCMK 4G7ZA 4A3IC 3S1NC 5IYCC 4MEXA 2R7ZC 4OIOA 4C3HC 3HOUC 4A3EC 1I6VA 3GTLC 1TWAK 3S15C 2E2IK 2A69A 4Y52K 4OINA 1YNNA 2JA6C 4BBSC 3GTGK 4KMUA 1Y1WC 4A3DC 3M3YK 4OIRA 1TWFK 3HKZL 2WAQL 4A3GK 5D4DA 2PPBA 3HOWC 3S1RC 4XLNA 4OIPA 4A3IK 3S1NK 2VUMC 3FKIC 5IYCK 4Y7NC 2R7ZK 2NVTC 4C2MC 1I3QK 4C3HK 5M5YK 4Q4ZA 3HOUK 4A3EK 4YFNA 3S2HC 2JA5C 5IP7K 2NVXC 3GTLK 3GTGC 4YFKA 3S15K 4BBSK 1Y1WK 2PMZL 1K83C 3HOZC 4A3GC 4A3MC 4QIWL 4G7HA 1XPPA 4A3DK 1SMYA 4NOIA 3HOWK 3WODA 5IYDC 3S1RK 4MQ9A 2VUMK 3FKIK 1I3QC 1ZYRA 5IP9C 4QJVB 4Y7NK 4A3JK 4C2MK 4C3IC 3K7AC 2NVTK 3EQLA 5C3EC 1I6HC 5IP7C 3HOXC 3S2HK 1BDFA 2JA5K 3PO3C 3RZOC 2NVXK 3I4MC 3H3VL 4A3FC 1SFOC 3DXJA 4BY1C 4A3BC 4Q5SA 2A68A 1K83K 2E2JK 4A3MK 3PO2C 2A6HA 4OIQA 2O5JA 5IYDK 4AYBD 4A3KC 4A3JC 4QJVA 5M3MK 5M5XK 4XLPA 1I50K 5IP9K 2Y0SD 2B63K 4C3IK 3K7AK 5C3EK 1I6HK 2CW0A 2PA8D 4ZH4A 3M4OC 5IYBK 3HOXK 2JA6K 3RZOK 4JK1A 3PO3K 3I4MK 3S17C 4A3FK 1SFOK 3H0GC 4X6AC 2E2JC 4BY1K 1IW7A 4MEYA 4A3BK 1TWCC 3GTPC 3GTKC 3PO2K 3HOYK 2B63C 3S16C 1I50C 4BY7C 4A3KK 3S1QC 5TMCA 5IYBC 2NVYC 4A93C 3M4OK 4A3CK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWG C;  4GZY A;  5FLM C;  4XSX A;  1Y1V C;  3S1M C;  3H0G K;  3S17 K;  3S2D C;  5C4J K;  4X6A K;  5C44 C;  2NVQ C;  5M3F K;  2JA7 K;  5M5W K;  1TWC K;  3I4N C;  3GTP K;  4A3L C;  2WB1 D;  3GTK K;  4XSZ A;  3GTQ C;  3HOY C;  4BXX C;  3CQZ C;  4YFX A;  5C4X C;  2A6E A;  4C3J C;  3GTJ C;  3S16 K;  4BY7 K;  3GTM C;  3S14 K;  3S1Q K;  2NVY K;  4A3C C;  2YU9 C;  3HOZ K;  1R9T K;  4A93 K;  4KN7 A;  1TWG K;  2R92 K;  2Y0S L;  1TWH C;  4BBR K;  5C4J C;  1Y1V K;  5FLM K;  2R93 C;  3S1M K;  2JA7 C;  2JA8 K;  2PA8 L;  3S2D K;  5C44 K;  2NVQ K;  3I4N K;  4YG2 A;  3HKZ D;  2WAQ D;  1HQM A;  4LJZ A;  2E2H C;  2O5I A;  3RZD K;  3GTQ K;  4A3L K;  4BXX K;  3CQZ K;  3HOV C;  3S14 C;  4C3J K;  5C4X K;  5TMF A;  4KN4 A;  3GTJ K;  3GTM K;  3GTO C;  3H3V D;  1WCM C;  1R9T C;  2BE5 A;  4G7O A;  2YU9 K;  2R92 C;  4BBR C;  2JA8 C;  1TWH K;  5FJ8 K;  2R93 K;  4LK1 A;  2PMZ D;  1TWA C;  4QIW D;  3RZD C;  2E2I C;  4Y52 C;  2E2H K;  1YNJ A;  3M3Y C;  1TWF C;  3HOV K;  2WB1 L;  4LK0 A;  4AYB L;  3GTO K;  4LLG A;  1WCM K;  4G7Z A;  4A3I C;  3S1N C;  5IYC C;  4MEX A;  2R7Z C;  4OIO A;  4C3H C;  3HOU C;  4A3E C;  1I6V A;  3GTL C;  1TWA K;  3S15 C;  2E2I K;  2A69 A;  4Y52 K;  4OIN A;  1YNN A;  2JA6 C;  4BBS C;  3GTG K;  4KMU A;  1Y1W C;  4A3D C;  3M3Y K;  4OIR A;  1TWF K;  3HKZ L;  2WAQ L;  4A3G K;  5D4D A;  2PPB A;  3HOW C;  3S1R C;  4XLN A;  4OIP A;  4A3I K;  3S1N K;  2VUM C;  3FKI C;  5IYC K;  4Y7N C;  2R7Z K;  2NVT C;  4C2M C;  1I3Q K;  4C3H K;  5M5Y K;  4Q4Z A;  3HOU K;  4A3E K;  4YFN A;  3S2H C;  2JA5 C;  5IP7 K;  2NVX C;  3GTL K;  3GTG C;  4YFK A;  3S15 K;  4BBS K;  1Y1W K;  2PMZ L;  1K83 C;  3HOZ C;  4A3G C;  4A3M C;  4QIW L;  4G7H A;  1XPP A;  4A3D K;  1SMY A;  4NOI A;  3HOW K;  3WOD A;  5IYD C;  3S1R K;  4MQ9 A;  2VUM K;  3FKI K;  1I3Q C;  1ZYR A;  5IP9 C;  4QJV B;  4Y7N K;  4A3J K;  4C2M K;  4C3I C;  3K7A C;  2NVT K;  3EQL A;  5C3E C;  1I6H C;  5IP7 C;  3HOX C;  3S2H K;  1BDF A;  2JA5 K;  3PO3 C;  3RZO C;  2NVX K;  3I4M C;  3H3V L;  4A3F C;  1SFO C;  3DXJ A;  4BY1 C;  4A3B C;  4Q5S A;  2A68 A;  1K83 K;  2E2J K;  4A3M K;  3PO2 C;  2A6H A;  4OIQ A;  2O5J A;  5IYD K;  4AYB D;  4A3K C;  4A3J C;  4QJV A;  5M3M K;  5M5X K;  4XLP A;  1I50 K;  5IP9 K;  2Y0S D;  2B63 K;  4C3I K;  3K7A K;  5C3E K;  1I6H K;  2CW0 A;  2PA8 D;  4ZH4 A;  3M4O C;  5IYB K;  3HOX K;  2JA6 K;  3RZO K;  4JK1 A;  3PO3 K;  3I4M K;  3S17 C;  4A3F K;  1SFO K;  3H0G C;  4X6A C;  2E2J C;  4BY1 K;  1IW7 A;  4MEY A;  4A3B K;  1TWC C;  3GTP C;  3GTK C;  3PO2 K;  3HOY K;  2B63 C;  3S16 C;  1I50 C;  4BY7 C;  4A3K K;  3S1Q C;  5TMC A;  5IYB C;  2NVY C;  4A93 C;  3M4O K;  4A3C K; 
#chains in the Genus database with same CATH topology
 1DD5 A;  1USM A;  3S17 K;  3H0G K;  3S2D C;  5C4J K;  3GTK A;  2NVQ C;  2JA7 K;  2ZJQ S;  3ADA C;  3GTP K;  3GTK K;  4XSZ A;  3HOY C;  3OEP A;  4C45 A;  4C3J C;  4BY7 K;  1WOP A;  3HOZ K;  5FLM K;  5C4J C;  3S1M K;  2R93 C;  2JA7 C;  2GSO A;  1WQG A;  3I4N K;  4A3L K;  3T00 A;  4J3N A;  3RZD K;  1WSR A;  1BGW A;  3GTJ K;  1O28 A;  2BE5 A;  2YU9 K;  3CAG A;  5FJ8 K;  2E2H A;  3TFJ A;  4LK1 A;  1EH1 A;  2E2I C;  1O29 A;  3RZD C;  4Y52 C;  2E2H K;  3AQP A;  3GTO A;  2NVY A;  3HOV K;  1YCL A;  1R9T A;  1WQH A;  1TWG A;  3GTO K;  4AYB L;  1ZBS A;  2ZUF A;  1Y1V A;  3GIR A;  5IYC C;  4OIO A;  5IOT A;  1XZP A;  3GTG K;  3GTM A;  4GTE A;  4WFA S;  1O2A A;  4OIR A;  1AB4 A;  4WFN S;  2PPB A;  1PJ7 A;  3SZY A;  4XLN A;  4A3I K;  2R7Z K;  5M5Y K;  3L4J A;  3S2H C;  3AD8 C;  3GTG C;  3S15 K;  2GSN A;  4BBS K;  1KQ4 A;  1Y1W K;  4A3D K;  1K83 C;  1VH2 A;  5IYD C;  4MQ9 A;  4QJV B;  2NVT K;  1TWA A;  3K7A C;  4IO9 S;  5HL8 A;  1F93 A;  2JA5 K;  3PO3 C;  3RZO C;  2GAG C;  3I4M C;  5E68 A;  4A3B C;  2E2J K;  2O5J A;  4OIQ A;  4GTD A;  4XLP A;  3GTL A;  4C3I K;  1XXC A;  2CW0 A;  4ZH4 A;  4IOC S;  1HI9 A;  5IOQ A;  1SFO K;  4BKW A;  2E2J C;  4KDD A;  3N0C A;  3LYW A;  3FKI A;  1WOS A;  2NVX A;  1ZXO A;  1JVI A;  1J6X A;  5JVG S;  1V5V A;  4WFB S;  4XSX A;  4P5A A;  4M1X A;  5C44 C;  5M3F K;  1IBA A;  5M5W K;  1TWC K;  2WB1 D;  2FQO A;  2B63 A;  3GTQ C;  4BXX C;  1I50 A;  4PAA A;  3CQZ C;  2A6E A;  4KAS A;  2P5M A;  4LR2 A;  3GEI A;  5JVO A;  1TWH C;  4P9S A;  2JA8 K;  3S2D K;  1C0A A;  2NVQ K;  3DLL S;  2CFA A;  4LJZ A;  1F9N A;  2V6T A;  4C3J K;  5HQH A;  1WCM C;  4G7O A;  2R93 A;  2JA7 A;  3AQO A;  3GTP A;  2JA8 C;  4GTF A;  2R93 K;  1XZP B;  2PMZ D;  2KXY A;  1UV7 A;  1TWF C;  2WB1 L;  4LK0 A;  4GTL A;  5EGH A;  4ILD A;  1G51 A;  3S1N C;  4MEX A;  3LAP A;  2RGR A;  2E2I A;  3ERE D;  4KMH A;  2E2I K;  4Y52 K;  3GTJ A;  3GEE A;  2D6F C;  4G0U A;  1WSV A;  4KB4 A;  2YU9 A;  2PHC B;  1PJ6 A;  3S1R C;  2W7V A;  1IQ0 A;  4FZB A;  2VUM C;  5IYC K;  4C2M C;  2XCQ A;  3FOF A;  1ZQ1 C;  1EQR A;  2V6S A;  4XCH A;  1RU0 A;  5JVH S;  2PMZ L;  4AH6 A;  4G7H A;  1BS2 A;  1SMY A;  1F7U A;  4KC6 A;  3BP3 A;  3EQL A;  1I6H C;  3GTG A;  1J6W A;  3HOX C;  3S2H K;  1BDF A;  1BJT A;  4G0V A;  5HL7 S;  2RH6 A;  2A68 A;  1K83 K;  3PO2 C;  2R7Z A;  3NUH A;  1VJE A;  4BLA A;  5IYD K;  1DCH A;  4A3K C;  2ZUE A;  3OPF A;  1O2B A;  5M5X K;  1J98 A;  3K7A K;  2PA8 D;  3M4O C;  4KM8 A;  5IYB K;  2JA6 K;  3RZO K;  3PO3 K;  1Y1W A;  3I4M K;  5L46 A;  4X6A C;  1O25 A;  1IW7 A;  4A3B K;  4BLB A;  4LQY A;  4KAR A;  2KWA A;  3S16 C;  2JA5 A;  1WQF A;  3S1Q C;  5IYB C;  2JA6 C;  2NVY C;  4A93 C;  1TWG C;  4GZY A;  4LOW A;  1Y1V C;  4GTA A;  2GSU A;  2P8T A;  1YX2 A;  1IE0 A;  2CFA B;  1O24 A;  4YFX A;  2V6U A;  5C4X C;  5EGE A;  1WOR A;  1PJ5 A;  3GTM C;  3S14 K;  2L5N A;  1SFO A;  3N0B A;  4KN7 A;  1VGX A;  3TFI A;  2R92 K;  3FOE A;  2PA8 L;  3PIP S;  5C44 K;  1O27 A;  3HKZ D;  2WAQ D;  3CQZ A;  3GTQ K;  1WIH A;  4BXX K;  2JH3 A;  3CQZ K;  3VA7 A;  3S14 C;  5TMF A;  4KN4 A;  3H3V D;  5DM6 S;  1VLO A;  1ZVU A;  2R92 C;  1TWC A;  1IS1 A;  1TWH K;  3SZZ A;  1TWA C;  4QIW D;  1VRQ C;  3M3Y C;  1WCM A;  4KAW X;  4LLG A;  1WCM K;  4G7Z A;  3LAJ A;  2FQT A;  5TJ3 A;  4KAT A;  4C3H C;  1O2F B;  3HOU C;  4A3E C;  3A8J A;  3GTL C;  4WIL A;  2A69 A;  4OIN A;  1YNN A;  1JOE A;  3MML B;  3ORE A;  1TWF K;  3HKZ L;  2WAQ L;  3HOW C;  2KPU A;  3BP8 C;  4OIP A;  3S1N K;  3FKI C;  4Y7N C;  4KM9 A;  1I3Q K;  2L3U A;  4Q4Z A;  1JQW A;  4WF9 S;  2NVX C;  1EI6 A;  3TTG A;  3IPJ A;  4QIW L;  4A3M C;  1XPP A;  4U67 S;  3G4A A;  2EBB A;  2VUM A;  3S1R K;  1X31 C;  1O26 A;  3G4C A;  2VUM K;  1I3Q C;  1ZYR A;  5IP9 C;  1FEU A;  4C2M K;  3GEH A;  5C3E C;  1DCP A;  4A3F C;  4BY1 C;  4Q5S A;  2A6H A;  4AYB D;  1XZQ A;  1USO A;  5M3M K;  2Y0S D;  1I6H K;  3HOX K;  3S17 C;  3V4G A;  3H0G C;  4MEY A;  4DDQ A;  3GTP C;  2XCO A;  3AD9 C;  3GTK C;  3N3Y A;  4GFQ A;  5IOS A;  3PO2 K;  5JFE A;  3L4K A;  2XCR B;  4A3K K;  4BY7 C;  5TMC A;  3HOZ C;  3M4O K;  4A3C K;  1K83 A;  3JST A;  5FLM C;  3S1M C;  4X6A K;  4RMF A;  1DCO A;  3I4N C;  4A3L C;  3CF5 S;  1WOO A;  3A8I A;  3S16 K;  3GTJ C;  2JA6 A;  3S1Q K;  2NVY K;  4A3C C;  2YU9 C;  1R9T K;  4A93 K;  1TWG K;  2Y0S L;  4BBR K;  1Y1V K;  3T01 A;  3S0X A;  1INN A;  3AH5 A;  3BUE A;  4YG2 A;  2E2H C;  1HQM A;  2O5I A;  3HOV C;  5C4X K;  3GTM K;  3GTO C;  1R9T C;  4BBR C;  2ZJR S;  1B4A A;  4KB2 A;  4G0W A;  3HXA A;  5CJ9 A;  1EK8 A;  1YNJ A;  3A8K A;  4IOA S;  2Y3P A;  2R92 A;  4WCE S;  2ZFZ A;  4A3I C;  2R7Z C;  3FHZ A;  3GTQ A;  1GE9 A;  1I6V A;  1TWA K;  3S15 C;  4WJ3 M;  4BBS C;  4KMU A;  1Y1W C;  4A3D C;  3M3Y K;  2ZJP S;  1IL2 A;  4FM9 A;  4A3G K;  5D4D A;  1TWH A;  3GDZ A;  3Q3Q A;  2NVT C;  4WJ4 A;  1J6V A;  4C3H K;  3TFH A;  4GTC A;  3HOU K;  4A3E K;  4YFN A;  2JA5 C;  5IP7 K;  1EFW A;  3GTL K;  4YFK A;  1XXB A;  5DM7 S;  4KMA A;  4A3G C;  3PIO S;  1L0W A;  3GSI A;  4NOI A;  3HOW K;  3WOD A;  1ISE A;  1XZQ B;  1XXA A;  3FKI K;  4Y7N K;  3QX3 A;  4A3J K;  4C3I C;  5IP7 C;  4PAB A;  2NVX K;  1TWF A;  4O2D A;  1SFO C;  2GAH C;  3DXJ A;  4A3M K;  4GTB A;  1F7V A;  3LPX A;  5CHP A;  4KMD A;  3AD7 C;  1I3Q A;  4GT9 A;  4A3J C;  4QJV A;  2B63 K;  3H3V L;  1I50 K;  5IP9 K;  3T02 A;  5C3E K;  5IOR A;  4JK1 A;  4A3F K;  4BY1 K;  1TWC C;  2KQ1 A;  4P5B A;  1B4B A;  3HOY K;  2B63 C;  1I50 C;  3H0G A; 
#chains in the Genus database with same CATH homology
 1TWG C;  4GZY A;  5FLM C;  4XSX A;  1Y1V C;  3S1M C;  3H0G K;  3S17 K;  3S2D C;  5C4J K;  4X6A K;  5C44 C;  2NVQ C;  5M3F K;  2JA7 K;  5M5W K;  1TWC K;  3I4N C;  3GTP K;  4A3L C;  2WB1 D;  3GTK K;  4XSZ A;  3GTQ C;  3HOY C;  4BXX C;  3CQZ C;  4YFX A;  5C4X C;  2A6E A;  4C3J C;  3GTJ C;  3S16 K;  4BY7 K;  3GTM C;  3S14 K;  3S1Q K;  2NVY K;  4A3C C;  2YU9 C;  3HOZ K;  1R9T K;  4A93 K;  4KN7 A;  1TWG K;  2R92 K;  2Y0S L;  1TWH C;  4BBR K;  5C4J C;  1Y1V K;  5FLM K;  2R93 C;  3S1M K;  2JA7 C;  2JA8 K;  2PA8 L;  3S2D K;  5C44 K;  2NVQ K;  3I4N K;  4YG2 A;  3HKZ D;  2WAQ D;  1HQM A;  4LJZ A;  2E2H C;  2O5I A;  3RZD K;  3GTQ K;  4A3L K;  4BXX K;  3CQZ K;  3HOV C;  3S14 C;  4C3J K;  5C4X K;  5TMF A;  4KN4 A;  3GTJ K;  3GTM K;  3GTO C;  3H3V D;  1WCM C;  1R9T C;  2BE5 A;  4G7O A;  2YU9 K;  2R92 C;  4BBR C;  2JA8 C;  1TWH K;  5FJ8 K;  2R93 K;  4LK1 A;  2PMZ D;  1TWA C;  4QIW D;  3RZD C;  2E2I C;  4Y52 C;  2E2H K;  1YNJ A;  3M3Y C;  1TWF C;  3HOV K;  2WB1 L;  4LK0 A;  4AYB L;  3GTO K;  4LLG A;  1WCM K;  4G7Z A;  4A3I C;  3S1N C;  5IYC C;  4MEX A;  2R7Z C;  4OIO A;  4C3H C;  3HOU C;  4A3E C;  1I6V A;  3GTL C;  1TWA K;  3S15 C;  2E2I K;  2A69 A;  4Y52 K;  4OIN A;  1YNN A;  2JA6 C;  4BBS C;  3GTG K;  4KMU A;  1Y1W C;  4A3D C;  3M3Y K;  4OIR A;  1TWF K;  3HKZ L;  2WAQ L;  4A3G K;  5D4D A;  2PPB A;  3HOW C;  3S1R C;  4XLN A;  4OIP A;  4A3I K;  3S1N K;  2VUM C;  3FKI C;  5IYC K;  4Y7N C;  2R7Z K;  2NVT C;  4C2M C;  1I3Q K;  4C3H K;  5M5Y K;  4Q4Z A;  3HOU K;  4A3E K;  4YFN A;  3S2H C;  2JA5 C;  5IP7 K;  2NVX C;  3GTL K;  3GTG C;  4YFK A;  3S15 K;  4BBS K;  1Y1W K;  2PMZ L;  1K83 C;  3HOZ C;  4A3G C;  4A3M C;  4QIW L;  4G7H A;  1XPP A;  4A3D K;  1SMY A;  4NOI A;  3HOW K;  3WOD A;  5IYD C;  3S1R K;  4MQ9 A;  2VUM K;  3FKI K;  1I3Q C;  1ZYR A;  5IP9 C;  4QJV B;  4Y7N K;  4A3J K;  4C2M K;  4C3I C;  3K7A C;  2NVT K;  3EQL A;  5C3E C;  1I6H C;  5IP7 C;  3HOX C;  3S2H K;  1BDF A;  2JA5 K;  3PO3 C;  3RZO C;  2NVX K;  3I4M C;  3H3V L;  4A3F C;  1SFO C;  3DXJ A;  4BY1 C;  4A3B C;  4Q5S A;  2A68 A;  1K83 K;  2E2J K;  4A3M K;  3PO2 C;  2A6H A;  4OIQ A;  2O5J A;  5IYD K;  4AYB D;  4A3K C;  4A3J C;  4QJV A;  5M3M K;  5M5X K;  4XLP A;  1I50 K;  5IP9 K;  2Y0S D;  2B63 K;  4C3I K;  3K7A K;  5C3E K;  1I6H K;  2CW0 A;  2PA8 D;  4ZH4 A;  3M4O C;  5IYB K;  3HOX K;  2JA6 K;  3RZO K;  4JK1 A;  3PO3 K;  3I4M K;  3S17 C;  4A3F K;  1SFO K;  3H0G C;  4X6A C;  2E2J C;  4BY1 K;  1IW7 A;  4MEY A;  4A3B K;  1TWC C;  3GTP C;  3GTK C;  3PO2 K;  3HOY K;  2B63 C;  3S16 C;  1I50 C;  4BY7 C;  4A3K K;  3S1Q C;  5TMC A;  5IYB C;  2NVY C;  4A93 C;  3M4O K;  4A3C K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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