3GTLC

Backtracked rna polymerase ii complex with 13mer with g<>u mismatch
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 37
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtlC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtlC01
3S2HC 3GTLK 4BXXC 3PO3K 5C44C 4KN4A 3PO2C 5IP7K 3WODA 4AYBL 4A3IK 2O5IA 4A3EK 4C3JC 3GTKC 4Q4ZA 5IYDK 3FKIC 4YFNA 1Y1VC 4OIRA 2YU9K 3M4OK 3GTJC 2NVTC 4C3IK 4BBSK 4A3KK 2NVXC 2JA5K 3GTGK 4MEYA 3H3VL 3GTOK 4A3DK 2NVYC 1K83K 3RZOC 5IYBK 5C4JC 2NVQC 1R9TK 1TWHK 1TWFC 5FLMC 4A3DC 4A3MK 2E2IK 2JA8K 3HOVK 4A3CK 3M3YK 2R92K 2PA8D 4XLPA 1SMYA 3HKZL 1I50K 1HQMA 4A3JK 3GTMK 1I6VA 1TWGK 3RZDK 2Y0SD 3GTPC 1I50C 4NOIA 3H3VD 3S14C 2R93K 4LK0A 4MEXA 5C44K 3GTQC 3HOZC 1I3QC 2WAQD 4Y7NK 5C4XK 2E2JK 2JA7K 3GTKK 1WCMC 2PMZD 4OINA 3FKIK 4AYBD 5M3FK 3I4MC 2CW0A 4LLGA 2YU9C 3M4OC 1Y1VK 2R7ZC 5IYCK 4BBRC 1SFOC 4ZH4A 4OIOA 4A3KC 1YNJA 3S2DC 4A3LC 5C3EK 4C2MC 2A69A 4Y52C 3GTGC 3HOYC 2O5JA 1BDFA 3HOUK 1SFOK 3S2DK 1TWCC 2A6HA 4C3HK 4YFKA 5IP9C 2R92C 4A3MC 2VUMC 3HOVC 1TWFK 2WB1L 4A3CC 2B63C 4BY7C 5FLMK 3S1NK 3DXJA 2PMZL 4KMUA 5IP9K 3K7AK 2VUMK 2JA6C 4A3GC 5M5WK 3I4NC 1TWAC 3S1MK 4LK1A 4BXXK 1Y1WK 3S17K 2JA6K 4A3GK 3I4NK 3GTPK 3S14K 1TWGC 4C3JK 3CQZK 2R93C 5IYDC 4A3IC 5TMFA 3S1RC 4BY1C 2E2HK 4X6AC 3S15K 3H0GC 4G7HA 4G7ZA 2JA7C 4Y7NC 3HOZK 1WCMK 3S1QK 4QJVB 5C4XC 4BBSC 4LJZA 4A3FK 4QIWD 3HOWK 4A3BC 2R7ZK 2JA8C 5C4JK 2NVQK 4BBRK 5IYCC 2BE5A 2E2IC 4XSXA 3S16C 5IYBC 1R9TC 4A3BK 4X6AK 4QIWL 5D4DA 2PPBA 4OIQA 1XPPA 3HOUC 4C2MK 4C3HC 1TWCK 4GZYA 4Q5SA 3HOYK 2A68A 3HOXC 4A3JC 4A93K 3K7AC 2B63K 1I6HK 4QJVA 4OIPA 1YNNA 3EQLA 2Y0SL 4A3EC 3RZDC 4A93C 5IP7C 1I6HC 3PO2K 5TMCA 4YFXA 1I3QK 5M5YK 4YG2A 1Y1WC 3S17C 2E2JC 4MQ9A 5M3MK 2WAQL 4C3IC 3GTJK 2NVXK 2NVTK 1ZYRA 3S15C 3CQZC 4KN7A 4G7OA 1TWAK 3I4MK 3S1RK 2NVYK 3S1QC 1IW7A 2E2HC 4BY1K 2JA5C 3GTOC 3H0GK 3RZOK 5M5XK 1TWHC 1K83C 4A3FC 3HOWC 3HKZD 5C3EC 4A3LK 4XSZA 3M3YC 4Y52K 5FJ8K 2PA8L 2WB1D 3S16K 3S1NC 4BY7K 2A6EA 3GTMC 3GTLC 3S2HK 3PO3C 3HOXK 3S1MC 4JK1A 3GTQK 4XLNA
chains in the Genus database with same CATH superfamily
2XCQA 5C44C 4KN4A 4AYBL 2CFAB 2O5IA 2GAHC 3GTKC 4AH6A 2ZFZA 2NVTC 3FKIA 2JA6A 5IORA 2JA7A 1YCLA 3GTOK 1L0WA 4A3DK 4KM8A 1K83K 4J3NA 2NVYA 5IYBK 5C4JC 3FOFA 1R9TK 2ZUEA 1TWFC 1WQHA 2R92K 2PA8D 1O24A 1EQRA 1WCMA 1O29A 1I6VA 1ZQ1C 3S14C 1USOA 4FZBA 5C44K 5C4XK 2PHCB 2E2JK 4WF9S 1XXBA 5JVGS 4G0WA 4AYBD 3ADAC 2YU9C 3Q3QA 2R7ZC 4WFNS 4ZH4A 4A3KC 1SFOC 3S2DC 4A3LC 1DCPA 2O5JA 5IP9C 4GTAA 4A3MC 5FLMK 4A3CC 4BY7C 1WSRA 2PMZL 1EH1A 2VUMK 1V5VA 3AQPA 1DCOA 4LK1A 1Y1WK 2JA6K 4A3GK 2D6FC 1PJ7A 3G4CA 3N0CA 2RH6A 1TWGA 4A3IC 5TMFA 4P5AA 3S15K 3H0GC 2GSUA 3AQOA 4KAWX 3LYWA 1WCMK 1VLOA 5IOQA 4A3FK 3HOWK 4A3BC 2JA8C 1EK8A 2E2IC 3LPXA 3LAJA 4OIQA 1TWCK 4GZYA 4Q5SA 2ZJRS 3GDZA 3L4KA 4A93K 3MMLB 2B63K 4QJVA 4OIPA 3GEEA 1DD5A 3EQLA 5HL7S 5IP7C 4YFXA 2ZUFA 4YG2A 1Y1WC 4KASA 5M3MK 2WAQL 4WFBS 4GTEA 4C3IC 4GT9A 1ZYRA 4KN7A 3S1RK 2NVYK 2KQ1A 1IW7A 2E2HC 1DCHA 1O27A 4RMFA 1XZQB 1TWHC 1K83C 2ZJQS 4KMDA 1WSVA 1EI6A 3AD7C 1F93A 2WB1D 3IPJA 3AH5A 4WILA 2RGRA 1AB4A 2XCOA 4KARA 4A3IK 2B63A 4Q4ZA 1Y1VC 5L46A 3M4OK 1F7VA 1FEUA 4BBSK 1VJEA 5E68A 2NVXC 5JVHS 4IOAS 3GTGK 3H3VL 2NVYC 2V6TA 5FLMC 4A3MK 4A3CK 3BP3A 2FQOA 3HKZL 2ZJPS 1HQMA 3TFIA 4WJ4A 3TFJA 1TWGK 3RZDK 1WQFA 1I50C 1R9TA 3S0XA 2JA7K 3GTKK 1WCMC 2VUMA 4DDQA 5M3FK 3I4MC 4GTBA 2CW0A 1I50A 1JVIA 4BBRC 1YNJA 1KQ4A 1F7UA 1J6VA 3GTGC 3HOYC 3GTQA 1BDFA 5EGEA 2A6HA 3V4GA 4C3HK 2VUMC 2R92C 1TWFK 3TTGA 3S1NK 5CHPA 5JVOA 5IP9K 2CFAA 2JA6C 4A3GC 5M5WK 3S1MK 2GAGC 3I4NK 3GTPK 1WOSA 3CAGA 1TWFA 4G7ZA 3BUEA 2JA7C 1TWAA 4WJ3M 1WQGA 4LJZA 3N3YA 4KDDA 1IL2A 2R7ZK 2NVQK 2E2IA 5IYCC 2BE5A 4A3BK 3GIRA 4KMAA 4QIWL 3PIPS 4C2MK 4C3HC 3VA7A 3HOXC 1F9NA 3NUHA 2KPUA 5JFEA 4A93C 3PO2K 4PAAA 1I3QK 5M5YK 4G0VA 3S17C 4WFAS 4X6AK 3I4MK 3A8JA 1IQ0A 3GTOC 1BS2A 3RZOK 5M5XK 3GTOA 3HOWC 1UV7A 4A3LK 2EBBA 3M3YC 1TWCA 1C0AA 4Y52K 3S1MC 4JK1A 3S2HC 3PO3K 3PO2C 3T01A 3WODA 5CJ9A 4C3JC 4KB2A 3PIOS 3FKIC 1ISEA 1O26A 4C3IK 2JH3A 5DM7S 1XZPB 2JA5K 4MEYA 1IE0A 3G4AA 2NVQC 4A3DC 5EGHA 2E2IK 4KMHA 1WOOA 5HQHA 1ZXOA 1ZBSA 4LR2A 1I50K 2E2HA 4KB4A 2Y0SD 3GTPC 4LK0A 4MEXA 3GTQC 3GTGA 1JQWA 4U67S 1GE9A 4OINA 3FKIK 4GTCA 3TFHA 3FOEA 3M4OC 1Y1VK 3OEPA 4OIOA 3JSTA 3HOUK 4Y52C 1O2BA 3GSIA 2R92A 3S2DK 1TWCC 4YFKA 1VGXA 3HOVC 3CQZA 3L4JA 4GTLA 2B63C 3AD9C 5IOSA 2GSOA 3K7AK 1PJ5A 2L5NA 1TWGC 1WIHA 3CQZK 5IYDC 2E2HK 4X6AC 4G7HA 2FQTA 3GTLA 5C4XC 2NVXA 3GTJA 4P5BA 1IBAA 4BBRK 2Y3PA 3S16C 3LAPA 1XPPA 3HOUC 3HOYK 2A68A 4A3JC 4KC6A 3BP8C 1INNA 1YNNA 2Y0SL 2L3UA 3A8IA 3RZDC 1I6HC 4G0UA 2XCRB 5TMCA 4IO9S 1RU0A 2E2JC 1XXCA 2NVTK 3CQZC 4G7OA 4LOWA 1BJTA 1K83A 3H0GK 2P8TA 4A3FC 3N0BA 3HKZD 5C3EC 4C45A 1Y1WA 4XSZA 4BKWA 4WCES 5FJ8K 2KWAA 5HL8A 4FM9A 4ILDA 3S16K 3S1NC 4KM9A 1XZPA 2A6EA 3GTMC 3GTLC 1VRQC 3PO3C 3HOXK 1SFOA 3GTQK 4IOCS 3GTLK 4BXXC 5IP7K 4A3EK 3SZZA 1Y1VA 2W7VA 5IYDK 4YFNA 4OIRA 2YU9K 3GTJC 1XXAA 4A3KK 5IOTA 3RZOC 2JA8K 1TWHK 3HOVK 3M3YK 4XLPA 1VH2A 3CF5S 1XZQA 1SMYA 1J6XA 1YX2A 3T02A 1WOPA 4A3JK 1JOEA 3GTMK 2P5MA 1TWHA 3H3VD 4NOIA 2R93K 1O25A 3GTPA 4GTFA 3HOZC 1I3QC 2WAQD 4GTDA 4Y7NK 2KXYA 3SZYA 2PMZD 2YU9A 3GTMA 4LLGA 5IYCK 1O28A 1EFWA 5C3EK 4C2MC 2A69A 3OREA 4KATA 1SFOK 1USMA 1WORA 2WB1L 3DXJA 4KMUA 3FHZA 3AD8C 3I4NC 1B4AA 5TJ3A 1TWAC 4BXXK 3S17K 3A8KA 3S14K 2R93A 1IS1A 4C3JK 2R93C 4M1XA 3S1RC 1J98A 3H0GA 4BY1C 4P9SA 4Y7NC 3HOZK 3S1QK 4QJVB 4BBSC 4QIWD 5C4JK 1ZVUA 2V6SA 3OPFA 2V6UA 4XSXA 5IYBC 1R9TC 3GTKA 4XCHA 5D4DA 3T00A 2PPBA 1J6WA 4LQYA 1PJ6A 4GFQA 5DM6S 3K7AC 1I6HK 1BGWA 1B4BA 4A3EC 3GEHA 4MQ9A 3ERED 1I3QA 3GTJK 2NVXK 4BLBA 3S15C 3HXAA 1O2FB 3S1QC 4BY1K 2JA5C 1HI9A 1X31C 2JA5A 3GEIA 4O2DA 1G51A 2GSNA 2PA8L 1O2AA 4BY7K 3QX3A 3DLLS 4PABA 2R7ZA 3S2HK 4BLAA 1TWAK 4XLNA
chains in the Genus database with same CATH topology
3S2HC 3GTLK 4BXXC 3PO3K 5C44C 4KN4A 3PO2C 5IP7K 3WODA 4AYBL 4A3IK 2O5IA 4A3EK 4C3JC 3GTKC 4Q4ZA 5IYDK 3FKIC 4YFNA 1Y1VC 4OIRA 2YU9K 3M4OK 3GTJC 2NVTC 4C3IK 4BBSK 4A3KK 2NVXC 2JA5K 3GTGK 4MEYA 3H3VL 3GTOK 4A3DK 2NVYC 1K83K 3RZOC 5IYBK 5C4JC 2NVQC 1R9TK 1TWHK 1TWFC 5FLMC 4A3DC 4A3MK 2E2IK 2JA8K 3HOVK 4A3CK 3M3YK 2R92K 2PA8D 4XLPA 1SMYA 3HKZL 1I50K 1HQMA 4A3JK 3GTMK 1I6VA 1TWGK 3RZDK 2Y0SD 3GTPC 1I50C 4NOIA 3H3VD 3S14C 2R93K 4LK0A 4MEXA 5C44K 3GTQC 3HOZC 1I3QC 2WAQD 4Y7NK 5C4XK 2E2JK 2JA7K 3GTKK 1WCMC 2PMZD 4OINA 3FKIK 4AYBD 5M3FK 3I4MC 2CW0A 4LLGA 2YU9C 3M4OC 1Y1VK 2R7ZC 5IYCK 4BBRC 1SFOC 4ZH4A 4OIOA 4A3KC 1YNJA 3S2DC 4A3LC 5C3EK 4C2MC 2A69A 4Y52C 3GTGC 3HOYC 2O5JA 1BDFA 3HOUK 1SFOK 3S2DK 1TWCC 2A6HA 4C3HK 4YFKA 5IP9C 2R92C 4A3MC 2VUMC 3HOVC 1TWFK 2WB1L 4A3CC 2B63C 4BY7C 5FLMK 3S1NK 3DXJA 2PMZL 4KMUA 5IP9K 3K7AK 2VUMK 2JA6C 4A3GC 5M5WK 3I4NC 1TWAC 3S1MK 4LK1A 4BXXK 1Y1WK 3S17K 2JA6K 4A3GK 3I4NK 3GTPK 3S14K 1TWGC 4C3JK 3CQZK 2R93C 5IYDC 4A3IC 5TMFA 3S1RC 4BY1C 2E2HK 4X6AC 3S15K 3H0GC 4G7HA 4G7ZA 2JA7C 4Y7NC 3HOZK 1WCMK 3S1QK 4QJVB 5C4XC 4BBSC 4LJZA 4A3FK 4QIWD 3HOWK 4A3BC 2R7ZK 2JA8C 5C4JK 2NVQK 4BBRK 5IYCC 2BE5A 2E2IC 4XSXA 3S16C 5IYBC 1R9TC 4A3BK 4X6AK 4QIWL 5D4DA 2PPBA 4OIQA 1XPPA 3HOUC 4C2MK 4C3HC 1TWCK 4GZYA 4Q5SA 3HOYK 2A68A 3HOXC 4A3JC 4A93K 3K7AC 2B63K 1I6HK 4QJVA 4OIPA 1YNNA 3EQLA 2Y0SL 4A3EC 3RZDC 4A93C 5IP7C 1I6HC 3PO2K 5TMCA 4YFXA 1I3QK 5M5YK 4YG2A 1Y1WC 3S17C 2E2JC 4MQ9A 5M3MK 2WAQL 4C3IC 3GTJK 2NVXK 2NVTK 1ZYRA 3S15C 3CQZC 4KN7A 4G7OA 1TWAK 3I4MK 3S1RK 2NVYK 3S1QC 1IW7A 2E2HC 4BY1K 2JA5C 3GTOC 3H0GK 3RZOK 5M5XK 1TWHC 1K83C 4A3FC 3HOWC 3HKZD 5C3EC 4A3LK 4XSZA 3M3YC 4Y52K 5FJ8K 2PA8L 2WB1D 3S16K 3S1NC 4BY7K 2A6EA 3GTMC 3GTLC 3S2HK 3PO3C 3HOXK 3S1MC 4JK1A 3GTQK 4XLNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S2H C;  3GTL K;  4BXX C;  3PO3 K;  5C44 C;  4KN4 A;  3PO2 C;  5IP7 K;  3WOD A;  4AYB L;  4A3I K;  2O5I A;  4A3E K;  4C3J C;  3GTK C;  4Q4Z A;  5IYD K;  3FKI C;  4YFN A;  1Y1V C;  4OIR A;  2YU9 K;  3M4O K;  3GTJ C;  2NVT C;  4C3I K;  4BBS K;  4A3K K;  2NVX C;  2JA5 K;  3GTG K;  4MEY A;  3H3V L;  3GTO K;  4A3D K;  2NVY C;  1K83 K;  3RZO C;  5IYB K;  5C4J C;  2NVQ C;  1R9T K;  1TWH K;  1TWF C;  5FLM C;  4A3D C;  4A3M K;  2E2I K;  2JA8 K;  3HOV K;  4A3C K;  3M3Y K;  2R92 K;  2PA8 D;  4XLP A;  1SMY A;  3HKZ L;  1I50 K;  1HQM A;  4A3J K;  3GTM K;  1I6V A;  1TWG K;  3RZD K;  2Y0S D;  3GTP C;  1I50 C;  4NOI A;  3H3V D;  3S14 C;  2R93 K;  4LK0 A;  4MEX A;  5C44 K;  3GTQ C;  3HOZ C;  1I3Q C;  2WAQ D;  4Y7N K;  5C4X K;  2E2J K;  2JA7 K;  3GTK K;  1WCM C;  2PMZ D;  4OIN A;  3FKI K;  4AYB D;  5M3F K;  3I4M C;  2CW0 A;  4LLG A;  2YU9 C;  3M4O C;  1Y1V K;  2R7Z C;  5IYC K;  4BBR C;  1SFO C;  4ZH4 A;  4OIO A;  4A3K C;  1YNJ A;  3S2D C;  4A3L C;  5C3E K;  4C2M C;  2A69 A;  4Y52 C;  3GTG C;  3HOY C;  2O5J A;  1BDF A;  3HOU K;  1SFO K;  3S2D K;  1TWC C;  2A6H A;  4C3H K;  4YFK A;  5IP9 C;  2R92 C;  4A3M C;  2VUM C;  3HOV C;  1TWF K;  2WB1 L;  4A3C C;  2B63 C;  4BY7 C;  5FLM K;  3S1N K;  3DXJ A;  2PMZ L;  4KMU A;  5IP9 K;  3K7A K;  2VUM K;  2JA6 C;  4A3G C;  5M5W K;  3I4N C;  1TWA C;  3S1M K;  4LK1 A;  4BXX K;  1Y1W K;  3S17 K;  2JA6 K;  4A3G K;  3I4N K;  3GTP K;  3S14 K;  1TWG C;  4C3J K;  3CQZ K;  2R93 C;  5IYD C;  4A3I C;  5TMF A;  3S1R C;  4BY1 C;  2E2H K;  4X6A C;  3S15 K;  3H0G C;  4G7H A;  4G7Z A;  2JA7 C;  4Y7N C;  3HOZ K;  1WCM K;  3S1Q K;  4QJV B;  5C4X C;  4BBS C;  4LJZ A;  4A3F K;  4QIW D;  3HOW K;  4A3B C;  2R7Z K;  2JA8 C;  5C4J K;  2NVQ K;  4BBR K;  5IYC C;  2BE5 A;  2E2I C;  4XSX A;  3S16 C;  5IYB C;  1R9T C;  4A3B K;  4X6A K;  4QIW L;  5D4D A;  2PPB A;  4OIQ A;  1XPP A;  3HOU C;  4C2M K;  4C3H C;  1TWC K;  4GZY A;  4Q5S A;  3HOY K;  2A68 A;  3HOX C;  4A3J C;  4A93 K;  3K7A C;  2B63 K;  1I6H K;  4QJV A;  4OIP A;  1YNN A;  3EQL A;  2Y0S L;  4A3E C;  3RZD C;  4A93 C;  5IP7 C;  1I6H C;  3PO2 K;  5TMC A;  4YFX A;  1I3Q K;  5M5Y K;  4YG2 A;  1Y1W C;  3S17 C;  2E2J C;  4MQ9 A;  5M3M K;  2WAQ L;  4C3I C;  3GTJ K;  2NVX K;  2NVT K;  1ZYR A;  3S15 C;  3CQZ C;  4KN7 A;  4G7O A;  1TWA K;  3I4M K;  3S1R K;  2NVY K;  3S1Q C;  1IW7 A;  2E2H C;  4BY1 K;  2JA5 C;  3GTO C;  3H0G K;  3RZO K;  5M5X K;  1TWH C;  1K83 C;  4A3F C;  3HOW C;  3HKZ D;  5C3E C;  4A3L K;  4XSZ A;  3M3Y C;  4Y52 K;  5FJ8 K;  2PA8 L;  2WB1 D;  3S16 K;  3S1N C;  4BY7 K;  2A6E A;  3GTM C;  3GTL C;  3S2H K;  3PO3 C;  3HOX K;  3S1M C;  4JK1 A;  3GTQ K;  4XLN A; 
#chains in the Genus database with same CATH topology
 2XCQ A;  5C44 C;  4KN4 A;  4AYB L;  2CFA B;  2O5I A;  2GAH C;  3GTK C;  4AH6 A;  2ZFZ A;  2NVT C;  3FKI A;  2JA6 A;  5IOR A;  2JA7 A;  1YCL A;  3GTO K;  1L0W A;  4A3D K;  4KM8 A;  1K83 K;  4J3N A;  2NVY A;  5IYB K;  5C4J C;  3FOF A;  1R9T K;  2ZUE A;  1TWF C;  1WQH A;  2R92 K;  2PA8 D;  1O24 A;  1EQR A;  1WCM A;  1O29 A;  1I6V A;  1ZQ1 C;  3S14 C;  1USO A;  4FZB A;  5C44 K;  5C4X K;  2PHC B;  2E2J K;  4WF9 S;  1XXB A;  5JVG S;  4G0W A;  4AYB D;  3ADA C;  2YU9 C;  3Q3Q A;  2R7Z C;  4WFN S;  4ZH4 A;  4A3K C;  1SFO C;  3S2D C;  4A3L C;  1DCP A;  2O5J A;  5IP9 C;  4GTA A;  4A3M C;  5FLM K;  4A3C C;  4BY7 C;  1WSR A;  2PMZ L;  1EH1 A;  2VUM K;  1V5V A;  3AQP A;  1DCO A;  4LK1 A;  1Y1W K;  2JA6 K;  4A3G K;  2D6F C;  1PJ7 A;  3G4C A;  3N0C A;  2RH6 A;  1TWG A;  4A3I C;  5TMF A;  4P5A A;  3S15 K;  3H0G C;  2GSU A;  3AQO A;  4KAW X;  3LYW A;  1WCM K;  1VLO A;  5IOQ A;  4A3F K;  3HOW K;  4A3B C;  2JA8 C;  1EK8 A;  2E2I C;  3LPX A;  3LAJ A;  4OIQ A;  1TWC K;  4GZY A;  4Q5S A;  2ZJR S;  3GDZ A;  3L4K A;  4A93 K;  3MML B;  2B63 K;  4QJV A;  4OIP A;  3GEE A;  1DD5 A;  3EQL A;  5HL7 S;  5IP7 C;  4YFX A;  2ZUF A;  4YG2 A;  1Y1W C;  4KAS A;  5M3M K;  2WAQ L;  4WFB S;  4GTE A;  4C3I C;  4GT9 A;  1ZYR A;  4KN7 A;  3S1R K;  2NVY K;  2KQ1 A;  1IW7 A;  2E2H C;  1DCH A;  1O27 A;  4RMF A;  1XZQ B;  1TWH C;  1K83 C;  2ZJQ S;  4KMD A;  1WSV A;  1EI6 A;  3AD7 C;  1F93 A;  2WB1 D;  3IPJ A;  3AH5 A;  4WIL A;  2RGR A;  1AB4 A;  2XCO A;  4KAR A;  4A3I K;  2B63 A;  4Q4Z A;  1Y1V C;  5L46 A;  3M4O K;  1F7V A;  1FEU A;  4BBS K;  1VJE A;  5E68 A;  2NVX C;  5JVH S;  4IOA S;  3GTG K;  3H3V L;  2NVY C;  2V6T A;  5FLM C;  4A3M K;  4A3C K;  3BP3 A;  2FQO A;  3HKZ L;  2ZJP S;  1HQM A;  3TFI A;  4WJ4 A;  3TFJ A;  1TWG K;  3RZD K;  1WQF A;  1I50 C;  1R9T A;  3S0X A;  2JA7 K;  3GTK K;  1WCM C;  2VUM A;  4DDQ A;  5M3F K;  3I4M C;  4GTB A;  2CW0 A;  1I50 A;  1JVI A;  4BBR C;  1YNJ A;  1KQ4 A;  1F7U A;  1J6V A;  3GTG C;  3HOY C;  3GTQ A;  1BDF A;  5EGE A;  2A6H A;  3V4G A;  4C3H K;  2VUM C;  2R92 C;  1TWF K;  3TTG A;  3S1N K;  5CHP A;  5JVO A;  5IP9 K;  2CFA A;  2JA6 C;  4A3G C;  5M5W K;  3S1M K;  2GAG C;  3I4N K;  3GTP K;  1WOS A;  3CAG A;  1TWF A;  4G7Z A;  3BUE A;  2JA7 C;  1TWA A;  4WJ3 M;  1WQG A;  4LJZ A;  3N3Y A;  4KDD A;  1IL2 A;  2R7Z K;  2NVQ K;  2E2I A;  5IYC C;  2BE5 A;  4A3B K;  3GIR A;  4KMA A;  4QIW L;  3PIP S;  4C2M K;  4C3H C;  3VA7 A;  3HOX C;  1F9N A;  3NUH A;  2KPU A;  5JFE A;  4A93 C;  3PO2 K;  4PAA A;  1I3Q K;  5M5Y K;  4G0V A;  3S17 C;  4WFA S;  4X6A K;  3I4M K;  3A8J A;  1IQ0 A;  3GTO C;  1BS2 A;  3RZO K;  5M5X K;  3GTO A;  3HOW C;  1UV7 A;  4A3L K;  2EBB A;  3M3Y C;  1TWC A;  1C0A A;  4Y52 K;  3S1M C;  4JK1 A;  3S2H C;  3PO3 K;  3PO2 C;  3T01 A;  3WOD A;  5CJ9 A;  4C3J C;  4KB2 A;  3PIO S;  3FKI C;  1ISE A;  1O26 A;  4C3I K;  2JH3 A;  5DM7 S;  1XZP B;  2JA5 K;  4MEY A;  1IE0 A;  3G4A A;  2NVQ C;  4A3D C;  5EGH A;  2E2I K;  4KMH A;  1WOO A;  5HQH A;  1ZXO A;  1ZBS A;  4LR2 A;  1I50 K;  2E2H A;  4KB4 A;  2Y0S D;  3GTP C;  4LK0 A;  4MEX A;  3GTQ C;  3GTG A;  1JQW A;  4U67 S;  1GE9 A;  4OIN A;  3FKI K;  4GTC A;  3TFH A;  3FOE A;  3M4O C;  1Y1V K;  3OEP A;  4OIO A;  3JST A;  3HOU K;  4Y52 C;  1O2B A;  3GSI A;  2R92 A;  3S2D K;  1TWC C;  4YFK A;  1VGX A;  3HOV C;  3CQZ A;  3L4J A;  4GTL A;  2B63 C;  3AD9 C;  5IOS A;  2GSO A;  3K7A K;  1PJ5 A;  2L5N A;  1TWG C;  1WIH A;  3CQZ K;  5IYD C;  2E2H K;  4X6A C;  4G7H A;  2FQT A;  3GTL A;  5C4X C;  2NVX A;  3GTJ A;  4P5B A;  1IBA A;  4BBR K;  2Y3P A;  3S16 C;  3LAP A;  1XPP A;  3HOU C;  3HOY K;  2A68 A;  4A3J C;  4KC6 A;  3BP8 C;  1INN A;  1YNN A;  2Y0S L;  2L3U A;  3A8I A;  3RZD C;  1I6H C;  4G0U A;  2XCR B;  5TMC A;  4IO9 S;  1RU0 A;  2E2J C;  1XXC A;  2NVT K;  3CQZ C;  4G7O A;  4LOW A;  1BJT A;  1K83 A;  3H0G K;  2P8T A;  4A3F C;  3N0B A;  3HKZ D;  5C3E C;  4C45 A;  1Y1W A;  4XSZ A;  4BKW A;  4WCE S;  5FJ8 K;  2KWA A;  5HL8 A;  4FM9 A;  4ILD A;  3S16 K;  3S1N C;  4KM9 A;  1XZP A;  2A6E A;  3GTM C;  3GTL C;  1VRQ C;  3PO3 C;  3HOX K;  1SFO A;  3GTQ K;  4IOC S;  3GTL K;  4BXX C;  5IP7 K;  4A3E K;  3SZZ A;  1Y1V A;  2W7V A;  5IYD K;  4YFN A;  4OIR A;  2YU9 K;  3GTJ C;  1XXA A;  4A3K K;  5IOT A;  3RZO C;  2JA8 K;  1TWH K;  3HOV K;  3M3Y K;  4XLP A;  1VH2 A;  3CF5 S;  1XZQ A;  1SMY A;  1J6X A;  1YX2 A;  3T02 A;  1WOP A;  4A3J K;  1JOE A;  3GTM K;  2P5M A;  1TWH A;  3H3V D;  4NOI A;  2R93 K;  1O25 A;  3GTP A;  4GTF A;  3HOZ C;  1I3Q C;  2WAQ D;  4GTD A;  4Y7N K;  2KXY A;  3SZY A;  2PMZ D;  2YU9 A;  3GTM A;  4LLG A;  5IYC K;  1O28 A;  1EFW A;  5C3E K;  4C2M C;  2A69 A;  3ORE A;  4KAT A;  1SFO K;  1USM A;  1WOR A;  2WB1 L;  3DXJ A;  4KMU A;  3FHZ A;  3AD8 C;  3I4N C;  1B4A A;  5TJ3 A;  1TWA C;  4BXX K;  3S17 K;  3A8K A;  3S14 K;  2R93 A;  1IS1 A;  4C3J K;  2R93 C;  4M1X A;  3S1R C;  1J98 A;  3H0G A;  4BY1 C;  4P9S A;  4Y7N C;  3HOZ K;  3S1Q K;  4QJV B;  4BBS C;  4QIW D;  5C4J K;  1ZVU A;  2V6S A;  3OPF A;  2V6U A;  4XSX A;  5IYB C;  1R9T C;  3GTK A;  4XCH A;  5D4D A;  3T00 A;  2PPB A;  1J6W A;  4LQY A;  1PJ6 A;  4GFQ A;  5DM6 S;  3K7A C;  1I6H K;  1BGW A;  1B4B A;  4A3E C;  3GEH A;  4MQ9 A;  3ERE D;  1I3Q A;  3GTJ K;  2NVX K;  4BLB A;  3S15 C;  3HXA A;  1O2F B;  3S1Q C;  4BY1 K;  2JA5 C;  1HI9 A;  1X31 C;  2JA5 A;  3GEI A;  4O2D A;  1G51 A;  2GSN A;  2PA8 L;  1O2A A;  4BY7 K;  3QX3 A;  3DLL S;  4PAB A;  2R7Z A;  3S2H K;  4BLA A;  1TWA K;  4XLN A; 
#chains in the Genus database with same CATH homology
 3S2H C;  3GTL K;  4BXX C;  3PO3 K;  5C44 C;  4KN4 A;  3PO2 C;  5IP7 K;  3WOD A;  4AYB L;  4A3I K;  2O5I A;  4A3E K;  4C3J C;  3GTK C;  4Q4Z A;  5IYD K;  3FKI C;  4YFN A;  1Y1V C;  4OIR A;  2YU9 K;  3M4O K;  3GTJ C;  2NVT C;  4C3I K;  4BBS K;  4A3K K;  2NVX C;  2JA5 K;  3GTG K;  4MEY A;  3H3V L;  3GTO K;  4A3D K;  2NVY C;  1K83 K;  3RZO C;  5IYB K;  5C4J C;  2NVQ C;  1R9T K;  1TWH K;  1TWF C;  5FLM C;  4A3D C;  4A3M K;  2E2I K;  2JA8 K;  3HOV K;  4A3C K;  3M3Y K;  2R92 K;  2PA8 D;  4XLP A;  1SMY A;  3HKZ L;  1I50 K;  1HQM A;  4A3J K;  3GTM K;  1I6V A;  1TWG K;  3RZD K;  2Y0S D;  3GTP C;  1I50 C;  4NOI A;  3H3V D;  3S14 C;  2R93 K;  4LK0 A;  4MEX A;  5C44 K;  3GTQ C;  3HOZ C;  1I3Q C;  2WAQ D;  4Y7N K;  5C4X K;  2E2J K;  2JA7 K;  3GTK K;  1WCM C;  2PMZ D;  4OIN A;  3FKI K;  4AYB D;  5M3F K;  3I4M C;  2CW0 A;  4LLG A;  2YU9 C;  3M4O C;  1Y1V K;  2R7Z C;  5IYC K;  4BBR C;  1SFO C;  4ZH4 A;  4OIO A;  4A3K C;  1YNJ A;  3S2D C;  4A3L C;  5C3E K;  4C2M C;  2A69 A;  4Y52 C;  3GTG C;  3HOY C;  2O5J A;  1BDF A;  3HOU K;  1SFO K;  3S2D K;  1TWC C;  2A6H A;  4C3H K;  4YFK A;  5IP9 C;  2R92 C;  4A3M C;  2VUM C;  3HOV C;  1TWF K;  2WB1 L;  4A3C C;  2B63 C;  4BY7 C;  5FLM K;  3S1N K;  3DXJ A;  2PMZ L;  4KMU A;  5IP9 K;  3K7A K;  2VUM K;  2JA6 C;  4A3G C;  5M5W K;  3I4N C;  1TWA C;  3S1M K;  4LK1 A;  4BXX K;  1Y1W K;  3S17 K;  2JA6 K;  4A3G K;  3I4N K;  3GTP K;  3S14 K;  1TWG C;  4C3J K;  3CQZ K;  2R93 C;  5IYD C;  4A3I C;  5TMF A;  3S1R C;  4BY1 C;  2E2H K;  4X6A C;  3S15 K;  3H0G C;  4G7H A;  4G7Z A;  2JA7 C;  4Y7N C;  3HOZ K;  1WCM K;  3S1Q K;  4QJV B;  5C4X C;  4BBS C;  4LJZ A;  4A3F K;  4QIW D;  3HOW K;  4A3B C;  2R7Z K;  2JA8 C;  5C4J K;  2NVQ K;  4BBR K;  5IYC C;  2BE5 A;  2E2I C;  4XSX A;  3S16 C;  5IYB C;  1R9T C;  4A3B K;  4X6A K;  4QIW L;  5D4D A;  2PPB A;  4OIQ A;  1XPP A;  3HOU C;  4C2M K;  4C3H C;  1TWC K;  4GZY A;  4Q5S A;  3HOY K;  2A68 A;  3HOX C;  4A3J C;  4A93 K;  3K7A C;  2B63 K;  1I6H K;  4QJV A;  4OIP A;  1YNN A;  3EQL A;  2Y0S L;  4A3E C;  3RZD C;  4A93 C;  5IP7 C;  1I6H C;  3PO2 K;  5TMC A;  4YFX A;  1I3Q K;  5M5Y K;  4YG2 A;  1Y1W C;  3S17 C;  2E2J C;  4MQ9 A;  5M3M K;  2WAQ L;  4C3I C;  3GTJ K;  2NVX K;  2NVT K;  1ZYR A;  3S15 C;  3CQZ C;  4KN7 A;  4G7O A;  1TWA K;  3I4M K;  3S1R K;  2NVY K;  3S1Q C;  1IW7 A;  2E2H C;  4BY1 K;  2JA5 C;  3GTO C;  3H0G K;  3RZO K;  5M5X K;  1TWH C;  1K83 C;  4A3F C;  3HOW C;  3HKZ D;  5C3E C;  4A3L K;  4XSZ A;  3M3Y C;  4Y52 K;  5FJ8 K;  2PA8 L;  2WB1 D;  3S16 K;  3S1N C;  4BY7 K;  2A6E A;  3GTM C;  3GTL C;  3S2H K;  3PO3 C;  3HOX K;  3S1M C;  4JK1 A;  3GTQ K;  4XLN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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