3GTLC

Backtracked rna polymerase ii complex with 13mer with g<>u mismatch
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 37
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtlC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtlC01
2B63C 3S1MC 2NVTC 3HOXC 4ZH4A 4JK1A 3I4NK 4MQ9A 1BDFA 4QIWD 3HOVC 2VUMC 5M3FK 3S14K 1WCMK 3S16K 3GTMC 4YFXA 3GTKK 4XLPA 1I6HK 3M3YC 4G7OA 4BY1K 4Y7NC 2JA8C 2YU9C 2JA7K 4A3CK 3S1RK 4A3GK 4NOIA 3S17C 1SMYA 4QJVA 3GTOK 5C44C 3PO3C 4LK1A 4A3DC 4BY7C 4A3EK 3H3VL 2PA8L 4A3FK 4G7ZA 4C3IK 2A69A 5IYBC 4XSXA 5C4XK 1TWAC 4C3JC 2CW0A 1SFOK 4LJZA 5C4JC 1TWHK 2R7ZK 2NVXK 5C3EC 2R7ZC 4C2MC 4A3MC 3HOWK 1K83C 3RZOK 3EQLA 4BBSC 1TWCK 4Y52K 2NVYC 3I4MK 5TMFA 1I3QK 4A3KC 4GZYA 1I6VA 3K7AC 3HOUC 4X6AC 2JA6K 4LK0A 3S2DK 2NVQC 4BBRC 3HOZK 4LLGA 1YNJA 4AYBL 2JA5K 3S15K 3M4OC 5TMCA 2O5IA 3S1QK 2Y0SL 3GTQC 2PPBA 2WAQD 4BY7K 2WAQL 4YG2A 5M5XK 3S16C 2O5JA 1TWGC 3H3VD 2B63K 1Y1VC 4A93C 3RZDK 2PA8D 2R93C 2NVTK 3S1MK 1YNNA 5IYCC 2JA7C 3S2HC 3S1RC 4A3CC 1XPPA 4A3JC 3HOXK 5IYDC 3PO2C 1IW7A 1TWFC 3HKZD 4G7HA 3HKZL 2E2HC 2VUMK 3HOVK 3HOYC 3GTLC 3GTMK 1I50C 5IP9K 4KN4A 2R92C 4C3HC 1Y1WK 3H0GC 4Y7NK 5M3MK 4MEYA 4A3BC 2E2JK 2WB1L 4BXXC 3S1NC 3S17K 5FLMC 3FKIC 3DXJA 4OIPA 3GTJC 4A3IC 4Q5SA 4KMUA 3CQZC 3GTGC 4QJVB 3PO3K 4Q4ZA 1R9TC 3GTPC 2E2IC 3HOWC 4A3LC 4AYBD 5IYBK 1TWAK 1ZYRA 4C3JK 4OIOA 5C4JK 4XLNA 2Y0SD 2A6HA 3I4NC 5C3EK 1HQMA 5IP7K 4C2MK 4A3MK 5M5YK 3S14C 1WCMC 2BE5A 1K83K 2E2IK 4BBSK 4OIRA 3GTKC 1I6HC 2PMZL 4YFNA 4A3KK 4BY1C 3K7AK 3HOUK 4A3GC 4X6AK 2A68A 2NVQK 4BBRK 3GTOC 4A3EC 3RZDC 4A3DK 3M4OK 4A3FC 4C3IC 3M3YK 2JA8K 5C4XC 2YU9K 3GTQK 3GTGK 2WB1D 4QIWL 1SFOC 5FJ8K 1TWHC 1TWGK 5IP9C 5C44K 2NVXC 1Y1VK 4A93K 2R93K 1Y1WC 3RZOC 5IYCK 3S2HK 1TWCC 4Y52C 2E2JC 3I4MC 4A3JK 1I3QC 4MEXA 3PO2K 2JA6C 5IYDK 5D4DA 1TWFK 2A6EA 3S2DC 2E2HK 3HOYK 3GTLK 1R9TK 1I50K 3HOZC 4XSZA 5M5WK 4C3HK 3WODA 2R92K 3H0GK 4KN7A 4OIQA 2JA5C 2PMZD 3S15C 4A3BK 2NVYK 3S1QC 3S1NK 4BXXK 4OINA 5FLMK 3FKIK 4A3IK 3GTJK 3CQZK 5IP7C 3GTPK 4YFKA 4A3LK
chains in the Genus database with same CATH superfamily
4KDDA 3GDZA 2KQ1A 3HOXC 1JVIA 4JK1A 1ZQ1C 5EGHA 4U67S 4XLPA 3AD8C 4KC6A 5HL7S 3L4JA 3M3YC 4A3GK 1K83A 4GTBA 3A8IA 3TFIA 5C44C 4LK1A 3AD7C 3T00A 1BJTA 4P5BA 2Y3PA 1HI9A 1TWAC 4GTCA 5C4JC 4IOAS 5HL8A 1BS2A 4ILDA 4KAWX 3HOWK 1VRQC 1UV7A 5TMFA 1I3QK 3ADAC 3BP3A 1VGXA 4BBRC 1TWAA 1TWFA 1O27A 4AYBL 3VA7A 3S1QK 3H0GA 2WAQD 1ZVUA 4YG2A 5M5XK 3S16C 3OPFA 3FKIA 4A93C 3S1MK 2PA8D 2NVTK 2XCOA 1WSRA 3PO2C 3HKZD 4G7HA 1F9NA 1IE0A 2R92C 4WFNS 4Y7NK 4MEYA 4A3BC 2E2JK 3GTKA 1XZQB 5HQHA 3S17K 4A3IC 3GEIA 1DCPA 3GTGC 4A3DK 1O2FB 4BY7K 4Q4ZA 3GTPC 4A3LC 2CFAB 4OIOA 3AD9C 3N0CA 2Y0SD 2JH3A 1PJ7A 3ERED 1HQMA 4A3MK 5M5YK 1K83K 1TWHA 4YFNA 3K7AK 3HOUK 4X6AK 4A3GC 4KM8A 2A68A 2NVQK 4BKWA 3LYWA 3HXAA 3M3YK 3GTQK 1FEUA 5IOTA 3OREA 3N3YA 5C44K 2R93K 1INNA 3AH5A 1O26A 5IYCK 4A3JK 4KB2A 1I3QC 1AB4A 1TWFK 1XXCA 1B4AA 4G0UA 4WJ4A 4J3NA 4AH6A 3GTLK 3HOYK 4O2DA 4C3HK 3H0GK 4OIQA 4C45A 5E68A 3S1QC 3S1NK 3BUEA 4OINA 3LPXA 5FLMK 3FKIK 2E2IC 1YNJA 1I3QA 4PABA 4KMDA 3S1MC 2NVTC 4LQYA 3G4AA 4MQ9A 1BDFA 1F7VA 3FOFA 3S16K 3S14K 1EQRA 5JVOA 3GTKK 1I6HK 2R7ZA 4BY1K 2E2IA 2KWAA 4Y7NC 3GEHA 3G4CA 1XZQA 3PIOS 3S17C 1VLOA 3GTOK 3GSIA 1O28A 4A3DC 4BY7C 3IPJA 2PA8L 1EFWA 1J6XA 4C3IK 2CFAA 5C4XK 4FM9A 2W7VA 1SFOK 1TWHK 1IL2A 4A3MC 3FOEA 1F7UA 1K83C 1TWGA 2NVYC 5IORA 3K7AC 3HOUC 4X6AC 2P8TA 4XCHA 4LK0A 2JA6K 3S2DK 2NVQC 4P5AA 5JFEA 2JA5K 2ZJPS 2Y0SL 3GTQC 2NVYA 4GTLA 3H3VD 2B63K 2GAHC 2R93C 3SZZA 5IYCC 2JA7C 3S1RC 4WFBS 4A3JC 1O2BA 1TWFC 3HOYC 3GTLC 3GTMK 4KN4A 3GTQA 4C3HC 2ZFZA 3H0GC 1G51A 5M3MK 2GSUA 1IBAA 3S1NC 3S0XA 2R93A 1XXBA 5FLMC 3FKIC 3DXJA 4OIPA 1IS1A 4QJVB 2JA7A 1O2AA 4RMFA 4KB4A 5IYBK 4LR2A 3GTLA 1ZYRA 3LAJA 3CAGA 2A6HA 3V4GA 2E2IK 4C2MK 2R7ZK 5IOSA 3S14C 3AQPA 3GTKC 1I6HC 4BY1C 4GTDA 1TWCA 3MMLB 4KARA 3GTOC 3RZDC 2EBBA 3TFHA 3LAPA 4C3IC 5C4XC 2GSOA 3L4KA 1SFOC 1IQ0A 5IOQA 1TWHC 1TWGK 2L3UA 3GTOA 5IYDK 2JA6C 5D4DA 3S2DC 3Q3QA 3TTGA 1I50K 5M5WK 4GTEA 1WOPA 3WODA 1SFOA 1VH2A 1ZBSA 3SZYA 2JA5C 2NVYK 3N0BA 4G0WA 1XZPB 1USMA 3OEPA 4BLBA 1R9TK 2JA6A 2B63C 4WF9S 4WFAS 4ZH4A 3A8JA 3I4NK 4QIWD 2JA5A 4PAAA 5M3FK 3GTMC 4YFXA 4IO9S 1F93A 2YU9C 2JA7K 1J6VA 3S1RK 2B63A 1SMYA 4QJVA 4A3EK 3H3VL 1L0WA 4G7ZA 2A69A 2V6SA 5IYBC 4XSXA 1J98A 3GTMA 4P9SA 1V5VA 2YU9A 3AQOA 2NVXK 2R7ZC 4C2MC 4G0VA 3RZOK 3EQLA 1KQ4A 1TWCK 3I4MK 2KPUA 1WQHA 5CJ9A 3HOZK 4GT9A 1EH1A 3S15K 5TMCA 2O5IA 2FQTA 2WAQL 5TJ3A 2O5JA 1TWGC 1YX2A 3BP8C 2FQOA 3RZDK 3TFJA 1YNNA 1DCHA 1XPPA 4A3CC 1GE9A 5IYDC 1IW7A 2KXYA 1J6WA 3HKZL 2VUMK 5DM7S 3HOVK 1I50C 4KMAA 1WOOA 1WCMA 2ZUEA 4FZBA 3NUHA 3FHZA 1XZPA 1PJ6A 3PO3K 4KMUA 1R9TC 1DD5A 4GTAA 2ZJQS 4C3JK 1I50A 1C0AA 3I4NC 2GSNA 5C3EK 4BBSK 2ZJRS 1B4BA 4LOWA 4A3KK 1R9TA 1X31C 1EI6A 2RGRA 4A3EC 1O25A 4KMHA 3M4OK 4WJ3M 2YU9K 2WB1D 5DM6S 4QIWL 4BLAA 2RH6A 5IP9C 2NVXC 1Y1VK 2XCQA 1Y1WC 3RZOC 3S2HK 1TWCC 3I4MC 2A6EA 1DCOA 2E2HK 3HOZC 4KN7A 3S15C 2PMZD 5CHPA 2NVXA 4BXXK 1Y1WA 1XXAA 3GTJK 3CQZK 5IP7C 2L5NA 3HOVC 2VUMC 1BGWA 1ZXOA 1WCMK 1USOA 4KASA 4G7OA 2JA8C 4A3CK 1WQGA 4NOIA 3PO3C 2GAGC 3JSTA 3T01A 1ISEA 4A3FK 3QX3A 4KM9A 4DDQA 2VUMA 4GFQA 4C3JC 2CW0A 4LJZA 4IOCS 2PHCB 5C3EC 1WORA 4BBSC 4Y52K 1WIHA 4A3KC 4GZYA 1I6VA 1EK8A 4LLGA 1WOSA 1WSVA 1O24A 3M4OC 2R92A 2V6UA 2XCRB 2PPBA 3T02A 1JQWA 1Y1VC 3GTGA 1VJEA 3GTPA 3HOXK 3S2HC 1RU0A 2E2HC 3PIPS 5IP9K 2V6TA 1Y1WK 5JVHS 3GIRA 2WB1L 1Y1VA 4BXXC 4Q5SA 1O29A 3A8KA 3GTJC 3CQZC 3HOWC 3CF5S 4AYBD 2E2HA 4KATA 1TWAK 5C4JK 4XLNA 4WCES 5JVGS 4WILA 5IP7K 1WCMC 2BE5A 4OIRA 2PMZL 3GTJA 1JOEA 3CQZA 1WQFA 3GEEA 4BBRK 4A3FC 1YCLA 5L46A 4M1XA 2JA8K 3DLLS 5FJ8K 2ZUFA 4A93K 4Y52C 2E2JC 4MEXA 3PO2K 2D6FC 2P5MA 4XSZA 2R92K 4GTFA 1PJ5A 4A3BK 5EGEA 4A3IK 3GTGK 3GTPK 4YFKA 4A3LK
chains in the Genus database with same CATH topology
2B63C 3S1MC 2NVTC 3HOXC 4ZH4A 4JK1A 3I4NK 4MQ9A 1BDFA 4QIWD 3HOVC 2VUMC 5M3FK 3S14K 1WCMK 3S16K 3GTMC 4YFXA 3GTKK 4XLPA 1I6HK 3M3YC 4G7OA 4BY1K 4Y7NC 2JA8C 2YU9C 2JA7K 4A3CK 3S1RK 4A3GK 4NOIA 3S17C 1SMYA 4QJVA 3GTOK 5C44C 3PO3C 4LK1A 4A3DC 4BY7C 4A3EK 3H3VL 2PA8L 4A3FK 4G7ZA 4C3IK 2A69A 5IYBC 4XSXA 5C4XK 1TWAC 4C3JC 2CW0A 1SFOK 4LJZA 5C4JC 1TWHK 2R7ZK 2NVXK 5C3EC 2R7ZC 4C2MC 4A3MC 3HOWK 1K83C 3RZOK 3EQLA 4BBSC 1TWCK 4Y52K 2NVYC 3I4MK 5TMFA 1I3QK 4A3KC 4GZYA 1I6VA 3K7AC 3HOUC 4X6AC 2JA6K 4LK0A 3S2DK 2NVQC 4BBRC 3HOZK 4LLGA 1YNJA 4AYBL 2JA5K 3S15K 3M4OC 5TMCA 2O5IA 3S1QK 2Y0SL 3GTQC 2PPBA 2WAQD 4BY7K 2WAQL 4YG2A 5M5XK 3S16C 2O5JA 1TWGC 3H3VD 2B63K 1Y1VC 4A93C 3RZDK 2PA8D 2R93C 2NVTK 3S1MK 1YNNA 5IYCC 2JA7C 3S2HC 3S1RC 4A3CC 1XPPA 4A3JC 3HOXK 5IYDC 3PO2C 1IW7A 1TWFC 3HKZD 4G7HA 3HKZL 2E2HC 2VUMK 3HOVK 3HOYC 3GTLC 3GTMK 1I50C 5IP9K 4KN4A 2R92C 4C3HC 1Y1WK 3H0GC 4Y7NK 5M3MK 4MEYA 4A3BC 2E2JK 2WB1L 4BXXC 3S1NC 3S17K 5FLMC 3FKIC 3DXJA 4OIPA 3GTJC 4A3IC 4Q5SA 4KMUA 3CQZC 3GTGC 4QJVB 3PO3K 4Q4ZA 1R9TC 3GTPC 2E2IC 3HOWC 4A3LC 4AYBD 5IYBK 1TWAK 1ZYRA 4C3JK 4OIOA 5C4JK 4XLNA 2Y0SD 2A6HA 3I4NC 5C3EK 1HQMA 5IP7K 4C2MK 4A3MK 5M5YK 3S14C 1WCMC 2BE5A 1K83K 2E2IK 4BBSK 4OIRA 3GTKC 1I6HC 2PMZL 4YFNA 4A3KK 4BY1C 3K7AK 3HOUK 4A3GC 4X6AK 2A68A 2NVQK 4BBRK 3GTOC 4A3EC 3RZDC 4A3DK 3M4OK 4A3FC 4C3IC 3M3YK 2JA8K 5C4XC 2YU9K 3GTQK 3GTGK 2WB1D 4QIWL 1SFOC 5FJ8K 1TWHC 1TWGK 5IP9C 5C44K 2NVXC 1Y1VK 4A93K 2R93K 1Y1WC 3RZOC 5IYCK 3S2HK 1TWCC 4Y52C 2E2JC 3I4MC 4A3JK 1I3QC 4MEXA 3PO2K 2JA6C 5IYDK 5D4DA 1TWFK 2A6EA 3S2DC 2E2HK 3HOYK 3GTLK 1R9TK 1I50K 3HOZC 4XSZA 5M5WK 4C3HK 3WODA 2R92K 3H0GK 4KN7A 4OIQA 2JA5C 2PMZD 3S15C 4A3BK 2NVYK 3S1QC 3S1NK 4BXXK 4OINA 5FLMK 3FKIK 4A3IK 3GTJK 3CQZK 5IP7C 3GTPK 4YFKA 4A3LK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B63 C;  3S1M C;  2NVT C;  3HOX C;  4ZH4 A;  4JK1 A;  3I4N K;  4MQ9 A;  1BDF A;  4QIW D;  3HOV C;  2VUM C;  5M3F K;  3S14 K;  1WCM K;  3S16 K;  3GTM C;  4YFX A;  3GTK K;  4XLP A;  1I6H K;  3M3Y C;  4G7O A;  4BY1 K;  4Y7N C;  2JA8 C;  2YU9 C;  2JA7 K;  4A3C K;  3S1R K;  4A3G K;  4NOI A;  3S17 C;  1SMY A;  4QJV A;  3GTO K;  5C44 C;  3PO3 C;  4LK1 A;  4A3D C;  4BY7 C;  4A3E K;  3H3V L;  2PA8 L;  4A3F K;  4G7Z A;  4C3I K;  2A69 A;  5IYB C;  4XSX A;  5C4X K;  1TWA C;  4C3J C;  2CW0 A;  1SFO K;  4LJZ A;  5C4J C;  1TWH K;  2R7Z K;  2NVX K;  5C3E C;  2R7Z C;  4C2M C;  4A3M C;  3HOW K;  1K83 C;  3RZO K;  3EQL A;  4BBS C;  1TWC K;  4Y52 K;  2NVY C;  3I4M K;  5TMF A;  1I3Q K;  4A3K C;  4GZY A;  1I6V A;  3K7A C;  3HOU C;  4X6A C;  2JA6 K;  4LK0 A;  3S2D K;  2NVQ C;  4BBR C;  3HOZ K;  4LLG A;  1YNJ A;  4AYB L;  2JA5 K;  3S15 K;  3M4O C;  5TMC A;  2O5I A;  3S1Q K;  2Y0S L;  3GTQ C;  2PPB A;  2WAQ D;  4BY7 K;  2WAQ L;  4YG2 A;  5M5X K;  3S16 C;  2O5J A;  1TWG C;  3H3V D;  2B63 K;  1Y1V C;  4A93 C;  3RZD K;  2PA8 D;  2R93 C;  2NVT K;  3S1M K;  1YNN A;  5IYC C;  2JA7 C;  3S2H C;  3S1R C;  4A3C C;  1XPP A;  4A3J C;  3HOX K;  5IYD C;  3PO2 C;  1IW7 A;  1TWF C;  3HKZ D;  4G7H A;  3HKZ L;  2E2H C;  2VUM K;  3HOV K;  3HOY C;  3GTL C;  3GTM K;  1I50 C;  5IP9 K;  4KN4 A;  2R92 C;  4C3H C;  1Y1W K;  3H0G C;  4Y7N K;  5M3M K;  4MEY A;  4A3B C;  2E2J K;  2WB1 L;  4BXX C;  3S1N C;  3S17 K;  5FLM C;  3FKI C;  3DXJ A;  4OIP A;  3GTJ C;  4A3I C;  4Q5S A;  4KMU A;  3CQZ C;  3GTG C;  4QJV B;  3PO3 K;  4Q4Z A;  1R9T C;  3GTP C;  2E2I C;  3HOW C;  4A3L C;  4AYB D;  5IYB K;  1TWA K;  1ZYR A;  4C3J K;  4OIO A;  5C4J K;  4XLN A;  2Y0S D;  2A6H A;  3I4N C;  5C3E K;  1HQM A;  5IP7 K;  4C2M K;  4A3M K;  5M5Y K;  3S14 C;  1WCM C;  2BE5 A;  1K83 K;  2E2I K;  4BBS K;  4OIR A;  3GTK C;  1I6H C;  2PMZ L;  4YFN A;  4A3K K;  4BY1 C;  3K7A K;  3HOU K;  4A3G C;  4X6A K;  2A68 A;  2NVQ K;  4BBR K;  3GTO C;  4A3E C;  3RZD C;  4A3D K;  3M4O K;  4A3F C;  4C3I C;  3M3Y K;  2JA8 K;  5C4X C;  2YU9 K;  3GTQ K;  3GTG K;  2WB1 D;  4QIW L;  1SFO C;  5FJ8 K;  1TWH C;  1TWG K;  5IP9 C;  5C44 K;  2NVX C;  1Y1V K;  4A93 K;  2R93 K;  1Y1W C;  3RZO C;  5IYC K;  3S2H K;  1TWC C;  4Y52 C;  2E2J C;  3I4M C;  4A3J K;  1I3Q C;  4MEX A;  3PO2 K;  2JA6 C;  5IYD K;  5D4D A;  1TWF K;  2A6E A;  3S2D C;  2E2H K;  3HOY K;  3GTL K;  1R9T K;  1I50 K;  3HOZ C;  4XSZ A;  5M5W K;  4C3H K;  3WOD A;  2R92 K;  3H0G K;  4KN7 A;  4OIQ A;  2JA5 C;  2PMZ D;  3S15 C;  4A3B K;  2NVY K;  3S1Q C;  3S1N K;  4BXX K;  4OIN A;  5FLM K;  3FKI K;  4A3I K;  3GTJ K;  3CQZ K;  5IP7 C;  3GTP K;  4YFK A;  4A3L K; 
#chains in the Genus database with same CATH topology
 4KDD A;  3GDZ A;  2KQ1 A;  3HOX C;  1JVI A;  4JK1 A;  1ZQ1 C;  5EGH A;  4U67 S;  4XLP A;  3AD8 C;  4KC6 A;  5HL7 S;  3L4J A;  3M3Y C;  4A3G K;  1K83 A;  4GTB A;  3A8I A;  3TFI A;  5C44 C;  4LK1 A;  3AD7 C;  3T00 A;  1BJT A;  4P5B A;  2Y3P A;  1HI9 A;  1TWA C;  4GTC A;  5C4J C;  4IOA S;  5HL8 A;  1BS2 A;  4ILD A;  4KAW X;  3HOW K;  1VRQ C;  1UV7 A;  5TMF A;  1I3Q K;  3ADA C;  3BP3 A;  1VGX A;  4BBR C;  1TWA A;  1TWF A;  1O27 A;  4AYB L;  3VA7 A;  3S1Q K;  3H0G A;  2WAQ D;  1ZVU A;  4YG2 A;  5M5X K;  3S16 C;  3OPF A;  3FKI A;  4A93 C;  3S1M K;  2PA8 D;  2NVT K;  2XCO A;  1WSR A;  3PO2 C;  3HKZ D;  4G7H A;  1F9N A;  1IE0 A;  2R92 C;  4WFN S;  4Y7N K;  4MEY A;  4A3B C;  2E2J K;  3GTK A;  1XZQ B;  5HQH A;  3S17 K;  4A3I C;  3GEI A;  1DCP A;  3GTG C;  4A3D K;  1O2F B;  4BY7 K;  4Q4Z A;  3GTP C;  4A3L C;  2CFA B;  4OIO A;  3AD9 C;  3N0C A;  2Y0S D;  2JH3 A;  1PJ7 A;  3ERE D;  1HQM A;  4A3M K;  5M5Y K;  1K83 K;  1TWH A;  4YFN A;  3K7A K;  3HOU K;  4X6A K;  4A3G C;  4KM8 A;  2A68 A;  2NVQ K;  4BKW A;  3LYW A;  3HXA A;  3M3Y K;  3GTQ K;  1FEU A;  5IOT A;  3ORE A;  3N3Y A;  5C44 K;  2R93 K;  1INN A;  3AH5 A;  1O26 A;  5IYC K;  4A3J K;  4KB2 A;  1I3Q C;  1AB4 A;  1TWF K;  1XXC A;  1B4A A;  4G0U A;  4WJ4 A;  4J3N A;  4AH6 A;  3GTL K;  3HOY K;  4O2D A;  4C3H K;  3H0G K;  4OIQ A;  4C45 A;  5E68 A;  3S1Q C;  3S1N K;  3BUE A;  4OIN A;  3LPX A;  5FLM K;  3FKI K;  2E2I C;  1YNJ A;  1I3Q A;  4PAB A;  4KMD A;  3S1M C;  2NVT C;  4LQY A;  3G4A A;  4MQ9 A;  1BDF A;  1F7V A;  3FOF A;  3S16 K;  3S14 K;  1EQR A;  5JVO A;  3GTK K;  1I6H K;  2R7Z A;  4BY1 K;  2E2I A;  2KWA A;  4Y7N C;  3GEH A;  3G4C A;  1XZQ A;  3PIO S;  3S17 C;  1VLO A;  3GTO K;  3GSI A;  1O28 A;  4A3D C;  4BY7 C;  3IPJ A;  2PA8 L;  1EFW A;  1J6X A;  4C3I K;  2CFA A;  5C4X K;  4FM9 A;  2W7V A;  1SFO K;  1TWH K;  1IL2 A;  4A3M C;  3FOE A;  1F7U A;  1K83 C;  1TWG A;  2NVY C;  5IOR A;  3K7A C;  3HOU C;  4X6A C;  2P8T A;  4XCH A;  4LK0 A;  2JA6 K;  3S2D K;  2NVQ C;  4P5A A;  5JFE A;  2JA5 K;  2ZJP S;  2Y0S L;  3GTQ C;  2NVY A;  4GTL A;  3H3V D;  2B63 K;  2GAH C;  2R93 C;  3SZZ A;  5IYC C;  2JA7 C;  3S1R C;  4WFB S;  4A3J C;  1O2B A;  1TWF C;  3HOY C;  3GTL C;  3GTM K;  4KN4 A;  3GTQ A;  4C3H C;  2ZFZ A;  3H0G C;  1G51 A;  5M3M K;  2GSU A;  1IBA A;  3S1N C;  3S0X A;  2R93 A;  1XXB A;  5FLM C;  3FKI C;  3DXJ A;  4OIP A;  1IS1 A;  4QJV B;  2JA7 A;  1O2A A;  4RMF A;  4KB4 A;  5IYB K;  4LR2 A;  3GTL A;  1ZYR A;  3LAJ A;  3CAG A;  2A6H A;  3V4G A;  2E2I K;  4C2M K;  2R7Z K;  5IOS A;  3S14 C;  3AQP A;  3GTK C;  1I6H C;  4BY1 C;  4GTD A;  1TWC A;  3MML B;  4KAR A;  3GTO C;  3RZD C;  2EBB A;  3TFH A;  3LAP A;  4C3I C;  5C4X C;  2GSO A;  3L4K A;  1SFO C;  1IQ0 A;  5IOQ A;  1TWH C;  1TWG K;  2L3U A;  3GTO A;  5IYD K;  2JA6 C;  5D4D A;  3S2D C;  3Q3Q A;  3TTG A;  1I50 K;  5M5W K;  4GTE A;  1WOP A;  3WOD A;  1SFO A;  1VH2 A;  1ZBS A;  3SZY A;  2JA5 C;  2NVY K;  3N0B A;  4G0W A;  1XZP B;  1USM A;  3OEP A;  4BLB A;  1R9T K;  2JA6 A;  2B63 C;  4WF9 S;  4WFA S;  4ZH4 A;  3A8J A;  3I4N K;  4QIW D;  2JA5 A;  4PAA A;  5M3F K;  3GTM C;  4YFX A;  4IO9 S;  1F93 A;  2YU9 C;  2JA7 K;  1J6V A;  3S1R K;  2B63 A;  1SMY A;  4QJV A;  4A3E K;  3H3V L;  1L0W A;  4G7Z A;  2A69 A;  2V6S A;  5IYB C;  4XSX A;  1J98 A;  3GTM A;  4P9S A;  1V5V A;  2YU9 A;  3AQO A;  2NVX K;  2R7Z C;  4C2M C;  4G0V A;  3RZO K;  3EQL A;  1KQ4 A;  1TWC K;  3I4M K;  2KPU A;  1WQH A;  5CJ9 A;  3HOZ K;  4GT9 A;  1EH1 A;  3S15 K;  5TMC A;  2O5I A;  2FQT A;  2WAQ L;  5TJ3 A;  2O5J A;  1TWG C;  1YX2 A;  3BP8 C;  2FQO A;  3RZD K;  3TFJ A;  1YNN A;  1DCH A;  1XPP A;  4A3C C;  1GE9 A;  5IYD C;  1IW7 A;  2KXY A;  1J6W A;  3HKZ L;  2VUM K;  5DM7 S;  3HOV K;  1I50 C;  4KMA A;  1WOO A;  1WCM A;  2ZUE A;  4FZB A;  3NUH A;  3FHZ A;  1XZP A;  1PJ6 A;  3PO3 K;  4KMU A;  1R9T C;  1DD5 A;  4GTA A;  2ZJQ S;  4C3J K;  1I50 A;  1C0A A;  3I4N C;  2GSN A;  5C3E K;  4BBS K;  2ZJR S;  1B4B A;  4LOW A;  4A3K K;  1R9T A;  1X31 C;  1EI6 A;  2RGR A;  4A3E C;  1O25 A;  4KMH A;  3M4O K;  4WJ3 M;  2YU9 K;  2WB1 D;  5DM6 S;  4QIW L;  4BLA A;  2RH6 A;  5IP9 C;  2NVX C;  1Y1V K;  2XCQ A;  1Y1W C;  3RZO C;  3S2H K;  1TWC C;  3I4M C;  2A6E A;  1DCO A;  2E2H K;  3HOZ C;  4KN7 A;  3S15 C;  2PMZ D;  5CHP A;  2NVX A;  4BXX K;  1Y1W A;  1XXA A;  3GTJ K;  3CQZ K;  5IP7 C;  2L5N A;  3HOV C;  2VUM C;  1BGW A;  1ZXO A;  1WCM K;  1USO A;  4KAS A;  4G7O A;  2JA8 C;  4A3C K;  1WQG A;  4NOI A;  3PO3 C;  2GAG C;  3JST A;  3T01 A;  1ISE A;  4A3F K;  3QX3 A;  4KM9 A;  4DDQ A;  2VUM A;  4GFQ A;  4C3J C;  2CW0 A;  4LJZ A;  4IOC S;  2PHC B;  5C3E C;  1WOR A;  4BBS C;  4Y52 K;  1WIH A;  4A3K C;  4GZY A;  1I6V A;  1EK8 A;  4LLG A;  1WOS A;  1WSV A;  1O24 A;  3M4O C;  2R92 A;  2V6U A;  2XCR B;  2PPB A;  3T02 A;  1JQW A;  1Y1V C;  3GTG A;  1VJE A;  3GTP A;  3HOX K;  3S2H C;  1RU0 A;  2E2H C;  3PIP S;  5IP9 K;  2V6T A;  1Y1W K;  5JVH S;  3GIR A;  2WB1 L;  1Y1V A;  4BXX C;  4Q5S A;  1O29 A;  3A8K A;  3GTJ C;  3CQZ C;  3HOW C;  3CF5 S;  4AYB D;  2E2H A;  4KAT A;  1TWA K;  5C4J K;  4XLN A;  4WCE S;  5JVG S;  4WIL A;  5IP7 K;  1WCM C;  2BE5 A;  4OIR A;  2PMZ L;  3GTJ A;  1JOE A;  3CQZ A;  1WQF A;  3GEE A;  4BBR K;  4A3F C;  1YCL A;  5L46 A;  4M1X A;  2JA8 K;  3DLL S;  5FJ8 K;  2ZUF A;  4A93 K;  4Y52 C;  2E2J C;  4MEX A;  3PO2 K;  2D6F C;  2P5M A;  4XSZ A;  2R92 K;  4GTF A;  1PJ5 A;  4A3B K;  5EGE A;  4A3I K;  3GTG K;  3GTP K;  4YFK A;  4A3L K; 
#chains in the Genus database with same CATH homology
 2B63 C;  3S1M C;  2NVT C;  3HOX C;  4ZH4 A;  4JK1 A;  3I4N K;  4MQ9 A;  1BDF A;  4QIW D;  3HOV C;  2VUM C;  5M3F K;  3S14 K;  1WCM K;  3S16 K;  3GTM C;  4YFX A;  3GTK K;  4XLP A;  1I6H K;  3M3Y C;  4G7O A;  4BY1 K;  4Y7N C;  2JA8 C;  2YU9 C;  2JA7 K;  4A3C K;  3S1R K;  4A3G K;  4NOI A;  3S17 C;  1SMY A;  4QJV A;  3GTO K;  5C44 C;  3PO3 C;  4LK1 A;  4A3D C;  4BY7 C;  4A3E K;  3H3V L;  2PA8 L;  4A3F K;  4G7Z A;  4C3I K;  2A69 A;  5IYB C;  4XSX A;  5C4X K;  1TWA C;  4C3J C;  2CW0 A;  1SFO K;  4LJZ A;  5C4J C;  1TWH K;  2R7Z K;  2NVX K;  5C3E C;  2R7Z C;  4C2M C;  4A3M C;  3HOW K;  1K83 C;  3RZO K;  3EQL A;  4BBS C;  1TWC K;  4Y52 K;  2NVY C;  3I4M K;  5TMF A;  1I3Q K;  4A3K C;  4GZY A;  1I6V A;  3K7A C;  3HOU C;  4X6A C;  2JA6 K;  4LK0 A;  3S2D K;  2NVQ C;  4BBR C;  3HOZ K;  4LLG A;  1YNJ A;  4AYB L;  2JA5 K;  3S15 K;  3M4O C;  5TMC A;  2O5I A;  3S1Q K;  2Y0S L;  3GTQ C;  2PPB A;  2WAQ D;  4BY7 K;  2WAQ L;  4YG2 A;  5M5X K;  3S16 C;  2O5J A;  1TWG C;  3H3V D;  2B63 K;  1Y1V C;  4A93 C;  3RZD K;  2PA8 D;  2R93 C;  2NVT K;  3S1M K;  1YNN A;  5IYC C;  2JA7 C;  3S2H C;  3S1R C;  4A3C C;  1XPP A;  4A3J C;  3HOX K;  5IYD C;  3PO2 C;  1IW7 A;  1TWF C;  3HKZ D;  4G7H A;  3HKZ L;  2E2H C;  2VUM K;  3HOV K;  3HOY C;  3GTL C;  3GTM K;  1I50 C;  5IP9 K;  4KN4 A;  2R92 C;  4C3H C;  1Y1W K;  3H0G C;  4Y7N K;  5M3M K;  4MEY A;  4A3B C;  2E2J K;  2WB1 L;  4BXX C;  3S1N C;  3S17 K;  5FLM C;  3FKI C;  3DXJ A;  4OIP A;  3GTJ C;  4A3I C;  4Q5S A;  4KMU A;  3CQZ C;  3GTG C;  4QJV B;  3PO3 K;  4Q4Z A;  1R9T C;  3GTP C;  2E2I C;  3HOW C;  4A3L C;  4AYB D;  5IYB K;  1TWA K;  1ZYR A;  4C3J K;  4OIO A;  5C4J K;  4XLN A;  2Y0S D;  2A6H A;  3I4N C;  5C3E K;  1HQM A;  5IP7 K;  4C2M K;  4A3M K;  5M5Y K;  3S14 C;  1WCM C;  2BE5 A;  1K83 K;  2E2I K;  4BBS K;  4OIR A;  3GTK C;  1I6H C;  2PMZ L;  4YFN A;  4A3K K;  4BY1 C;  3K7A K;  3HOU K;  4A3G C;  4X6A K;  2A68 A;  2NVQ K;  4BBR K;  3GTO C;  4A3E C;  3RZD C;  4A3D K;  3M4O K;  4A3F C;  4C3I C;  3M3Y K;  2JA8 K;  5C4X C;  2YU9 K;  3GTQ K;  3GTG K;  2WB1 D;  4QIW L;  1SFO C;  5FJ8 K;  1TWH C;  1TWG K;  5IP9 C;  5C44 K;  2NVX C;  1Y1V K;  4A93 K;  2R93 K;  1Y1W C;  3RZO C;  5IYC K;  3S2H K;  1TWC C;  4Y52 C;  2E2J C;  3I4M C;  4A3J K;  1I3Q C;  4MEX A;  3PO2 K;  2JA6 C;  5IYD K;  5D4D A;  1TWF K;  2A6E A;  3S2D C;  2E2H K;  3HOY K;  3GTL K;  1R9T K;  1I50 K;  3HOZ C;  4XSZ A;  5M5W K;  4C3H K;  3WOD A;  2R92 K;  3H0G K;  4KN7 A;  4OIQ A;  2JA5 C;  2PMZ D;  3S15 C;  4A3B K;  2NVY K;  3S1Q C;  3S1N K;  4BXX K;  4OIN A;  5FLM K;  3FKI K;  4A3I K;  3GTJ K;  3CQZ K;  5IP7 C;  3GTP K;  4YFK A;  4A3L K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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