3GTLC

Backtracked rna polymerase ii complex with 13mer with g<>u mismatch
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 37
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtlC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtlC01
2Y0SD 3HOXK 3I4NC 1I6VA 1WCMK 1YNNA 4BY7C 4A3LK 4MQ9A 1I3QK 1R9TK 3S16K 4A3KC 3RZOC 2WAQD 4YFNA 3GTMK 3HOUC 3GTQK 3PO3C 4C3JK 5C3EK 3HOZC 3GTJK 5IP9C 5IP9K 2NVYC 2A69A 4OINA 3DXJA 2NVQK 5IYDK 4LJZA 2NVTC 4A3MK 4A3CK 4G7HA 2YU9C 2B63C 2R92C 2B63K 2JA8K 3GTPK 3S2HK 1TWCC 3HKZD 1TWCK 3GTGC 3GTGK 1TWGC 2Y0SL 4XSXA 4KMUA 2E2IC 2NVXC 2E2JK 2E2IK 2JA6C 4A3IC 2NVXK 2JA6K 3S1MC 5TMCA 4OIRA 3GTOC 3GTLK 1I50C 4YFKA 3S14C 4OIOA 3S1RC 2WAQL 2WB1D 3CQZC 1K83C 4Y52C 3FKIK 5IYCK 1BDFA 5M3FK 2PA8D 4C3IC 5M5WK 3M3YK 1TWAC 2PMZD 4X6AC 3S17C 1TWAK 4LK0A 5C4XC 5C4XK 3I4NK 4AYBD 3S17K 4Q4ZA 2A6EA 4BY1C 4BY1K 1Y1WC 4BY7K 2R93C 4A3KK 3RZOK 5TMFA 4Q5SA 4QIWL 3HOUK 3PO3K 1HQMA 4QJVA 5C4JC 3WODA 1SMYA 3HOZK 5FJ8K 3S2DC 2NVYK 2JA5C 2JA5K 1TWHC 2NVTK 2VUMC 2BE5A 2YU9K 4GZYA 2R92K 2VUMK 4A3DC 4JK1A 2WB1L 4QJVB 1TWGK 2PA8L 2PMZL 4A93C 4C2MC 4A3IK 4AYBL 3S1MK 5D4DA 4A3JC 1XPPA 3GTOK 1I50K 1IW7A 4OIQA 3S14K 3H3VD 3S1RK 1Y1VC 3CQZK 1SFOC 1K83K 4A3GC 5IP7C 4Y7NC 2O5IA 4C3IK 5M5XK 4X6AK 4XLNA 3K7AC 5FLMC 3S1NC 3S1NK 4A3EC 1Y1WK 3S1QC 2R93K 4BBRC 3PO2C 4G7ZA 4NOIA 2JA7C 4C3HC 4BXXC 5M5YK 2JA7K 3HOYK 5IYDC 3I4MC 4BBSC 4OIPA 3HKZL 3S15C 5C4JK 1ZYRA 4MEXA 3HOVC 4YG2A 2PPBA 3S2DK 1TWFC 4A3BC 4YFXA 5IYBC 1TWHK 5IYBK 4A3BK 4LK1A 2O5JA 5C44C 3HOWC 3H3VL 3M4OC 4A3DK 4A3FC 4A3FK 1I6HC 1I6HK 4XLPA 2E2HC 2R7ZC 3GTKC 3HOYC 2E2HK 3GTKK 2R7ZK 4C2MK 4A93K 3HOXC 2CW0A 4KN7A 4A3JK 1WCMC 1YNJA 4A3LC 2A68A 3RZDC 1I3QC 1R9TC 4G7OA 1Y1VK 3RZDK 4LLGA 3S16C 1SFOK 4ZH4A 5IP7K 4Y7NK 4A3GK 3GTMC 3K7AK 5FLMK 3GTQC 4C3JC 5C3EC 4A3EK 5M3MK 3S1QK 4BBRK 3PO2K 2NVQC 4BXXK 4C3HK 4Y52K 4A3MC 4A3CC 3I4MK 4QIWD 4BBSK 2JA8C 3GTPC 2A6HA 3S2HC 3S15K 3HOVK 1TWFK 4XSZA 2E2JC 3H0GC 3H0GK 4MEYA 5C44K 3GTLC 3HOWK 3M4OK 3GTJC 5IYCC 4KN4A 3EQLA 3M3YC 3FKIC
chains in the Genus database with same CATH superfamily
4BKWA 3PIPS 3HOXK 1WCMK 1YNNA 1I3QK 1R9TK 1KQ4A 3RZOC 3L4KA 1FEUA 5IP9K 2NVYC 4A3CK 3G4CA 3FKIA 2YU9C 2B63K 3S2HK 2RGRA 2Y0SL 4KMUA 5JFEA 2NVXK 2JA6K 3S1MC 5IOQA 3GTJK 5IYCK 3CQZC 1K83C 4Y52C 3FKIK 5M3FK 3M3YK 1F93A 4GTEA 3AQPA 1TWAK 3S17C 4BY1C 1GE9A 3GTGA 3GEIA 3HOUK 2E2IA 4QJVA 1DD5A 4LOWA 4P5AA 3WODA 3GTLA 2P8TA 2VUMK 1F7UA 2EBBA 2ZFZA 4QJVB 1TWGK 3TFIA 2PMZL 1Y1WA 3FHZA 1XPPA 1I50K 3S14K 5DM6S 4Y7NC 2P5MA 2NVYA 1HI9A 1O29A 3K7AC 2JA5A 1Y1WK 2YU9A 4KAWX 2JA7C 5IYDC 3I4MC 1WOSA 3HKZL 3S15C 3HOVC 3N3YA 3S2DK 3BUEA 5E68A 1TWFC 3FOFA 3V4GA 3CQZA 4YFXA 1K83A 4A3BK 2XCQA 3TFJA 4LK1A 4GTBA 3HOWC 3H3VL 3M4OC 3LAPA 2Y3PA 4LQYA 3JSTA 4IOCS 1RU0A 4LR2A 2E2HC 4WFAS 3GTKC 4A93K 4J3NA 3HOXC 4A3JK 2KPUA 1WCMC 4GTDA 1WOOA 1I3QC 1R9TC 1WSRA 4KC6A 4A3GK 1L0WA 2GSOA 3GEHA 4KMDA 5FLMK 1VGXA 1O2AA 4BXXK 5L46A 1J6WA 4A3CC 1YCLA 3S2HC 3GEEA 3OPFA 1IL2A 3H0GK 3SZYA 3GTMA 3GTJC 3A8JA 5IYCC 3HOYK 3EQLA 3M3YC 3FKIC 1PJ6A 4PAAA 4MQ9A 1EQRA 1O2FB 2WAQD 1X31C 2V6UA 1TWFA 3GTMK 3HOUC 3GTQK 4PABA 5HQHA 2KXYA 3DXJA 2NVQK 4FM9A 4IO9S 4A3MK 2GSNA 1O2BA 3HKZD 1TWCK 1WCMA 3GTGC 1TWGC 4XSXA 2E2IC 2E2JK 1I3QA 1R9TA 4WILA 1I50C 3S14C 4OIOA 1YX2A 4KDDA 5C4XK 4FZBA 4Q4ZA 1Y1WC 2B63A 4A3KK 4QIWL 4Q5SA 2NVXA 2JA6A 3HOZK 3S2DC 1B4BA 3HXAA 2JA5C 3GTJA 2NVTK 1XZQB 4KMAA 2R92K 2BE5A 1TWAA 4WJ3M 2WB1L 4JK1A 3ADAC 2ZUFA 1IQ0A 2PA8L 3CF5S 4A93C 5CJ9A 4KATA 5CHPA 2R93A 4AYBL 4A3JC 3GTOK 1XZPB 1BJTA 4DDQA 4A3GC 4X6AK 5FLMC 1O28A 3L4JA 4G0VA 3S1NK 2VUMA 2ZJRS 3GIRA 2R93K 4BXXC 1TWGA 2GAGC 4GT9A 1J6XA 1ZYRA 3FOEA 1PJ5A 4ILDA 4YG2A 1I50A 5IYBK 1SFOA 1G51A 2KQ1A 1O24A 2O5JA 4A3DK 4A3FK 1I6HK 3HOYC 2R7ZK 3AQOA 5JVGS 1JOEA 3T00A 2A68A 3RZDK 5JVOA 1SFOK 4LLGA 5IP7K 3GTMC 5EGHA 3GTQC 4BLAA 3LYWA 4BBRK 3PO2K 3NUHA 2NVQC 1JQWA 5HL8A 4C3HK 4A3MC 4BBSK 4QIWD 2A6HA 2V6SA 1VH2A 1XXAA 1VRQC 2E2JC 3BP8C 4KMHA 5C44K 1WOPA 3TTGA 5IORA 2V6TA 2Y0SD 3A8KA 1ISEA 4A3LK 3GTPA 1EK8A 1B4AA 3S16K 4A3KC 2FQTA 4YFNA 5C3EK 3HOZC 3H0GA 5IP9C 4OINA 2A69A 3T01A 2NVTC 1WIHA 3S0XA 3GTPK 2R92C 2B63C 1EI6A 4KM9A 2NVXC 2JA6C 3IPJA 5TMCA 3GTOC 3GTQA 5JVHS 2CFAB 3GDZA 4Y52K 3AD8C 1BDFA 1AB4A 1ZVUA 1TWAC 2PMZD 4X6AC 3I4NK 3S17K 2A6EA 4BY7K 4BY1K 3N0BA 2R93C 1VJEA 1TWCA 5TMFA 3SZZA 3PO3K 1HQMA 4G0UA 1SMYA 1WQHA 2FQOA 4KARA 4G0WA 1VLOA 1BS2A 2VUMC 3TFHA 4GZYA 4A3DC 4GTFA 3QX3A 4A3IK 4O2DA 1IW7A 3H3VD 3S1RK 1SFOC 5IP7C 4C3IK 5M5XK 1JVIA 3LAJA 5IOTA 2R92A 4BBRC 1XZQA 3PO2C 4NOIA 4C3HC 5M5YK 2JA7K 4KB2A 4BBSC 4OIPA 4WFBS 5C4JK 3GTOA 1J98A 1ZXOA 1XZPA 4A3BC 1TWHK 1XXCA 1O26A 1WQFA 5HL7S 5C44C 4XLPA 3N0CA 2E2HK 3GTKK 4KASA 4C2MK 2CW0A 4KN7A 2W7VA 1O27A 4A3LC 1INNA 4G7OA 1Y1VK 1USOA 3S16C 3DLLS 4KB4A 2KWAA 3PIOS 5C3EC 4A3EK 1WORA 3AH5A 3S1QK 1IBAA 2R7ZA 3GTPC 2L5NA 4AH6A 3GSIA 1O25A 3H0GC 4MEYA 3OEPA 4KN4A 3ERED 3I4NC 1BGWA 1I6VA 1WSVA 1XXBA 4BY7C 4C45A 1EH1A 4GTCA 1UV7A 3PO3C 4C3JK 4IOAS 4LJZA 4G7HA 2JA8K 2XCOA 4XCHA 1TWCC 3GTGK 4GFQA 2E2IK 4A3IC 2GAHC 4OIRA 3GTLK 4YFKA 3S1RC 2WAQL 2WB1D 1ZQ1C 3BP3A 2PA8D 4C3IC 5M5WK 4LK0A 5C4XC 4WF9S 4RMFA 4AYBD 2D6FC 3RZOK 4WFNS 3OREA 5TJ3A 3Q3QA 5C4JC 5FJ8K 4GTAA 2NVYK 1F7VA 1IE0A 3VA7A 2JA5K 1TWHC 2YU9K 2CFAA 2ZUEA 1ZBSA 4P5BA 4C2MC 3S1MK 1IS1A 5D4DA 2GSUA 4OIQA 3LPXA 1Y1VC 3CQZK 1K83K 3MMLB 2O5IA 4XLNA 3S1NC 5IOSA 4WCES 4A3EC 3S1QC 4G7ZA 2JH3A 4MEXA 3AD7C 2PPBA 1EFWA 4P9SA 3CAGA 5IYBC 1DCHA 4A3FC 1J6VA 3T02A 1I6HC 2R7ZC 5EGEA 1V5VA 2PHCB 5DM7S 3AD9C 1DCOA 2JA7A 1YNJA 1WQGA 3RZDC 4GTLA 3A8IA 4U67S 1PJ7A 4ZH4A 4Y7NK 3G4AA 3K7AK 4C3JC 1F9NA 1TWHA 1DCPA 1USMA 5M3MK 4BLBA 2L3UA 3GTKA 2RH6A 3I4MK 2E2HA 4WJ4A 5IYDK 2JA8C 3S15K 3HOVK 2ZJPS 1TWFK 4XSZA 1Y1VA 2ZJQS 4M1XA 3GTLC 2XCRB 3HOWK 3M4OK 1C0AA 4KM8A
chains in the Genus database with same CATH topology
2Y0SD 3HOXK 3I4NC 1I6VA 1WCMK 1YNNA 4BY7C 4A3LK 4MQ9A 1I3QK 1R9TK 3S16K 4A3KC 3RZOC 2WAQD 4YFNA 3GTMK 3HOUC 3GTQK 3PO3C 4C3JK 5C3EK 3HOZC 3GTJK 5IP9C 5IP9K 2NVYC 2A69A 4OINA 3DXJA 2NVQK 5IYDK 4LJZA 2NVTC 4A3MK 4A3CK 4G7HA 2YU9C 2B63C 2R92C 2B63K 2JA8K 3GTPK 3S2HK 1TWCC 3HKZD 1TWCK 3GTGC 3GTGK 1TWGC 2Y0SL 4XSXA 4KMUA 2E2IC 2NVXC 2E2JK 2E2IK 2JA6C 4A3IC 2NVXK 2JA6K 3S1MC 5TMCA 4OIRA 3GTOC 3GTLK 1I50C 4YFKA 3S14C 4OIOA 3S1RC 2WAQL 2WB1D 3CQZC 1K83C 4Y52C 3FKIK 5IYCK 1BDFA 5M3FK 2PA8D 4C3IC 5M5WK 3M3YK 1TWAC 2PMZD 4X6AC 3S17C 1TWAK 4LK0A 5C4XC 5C4XK 3I4NK 4AYBD 3S17K 4Q4ZA 2A6EA 4BY1C 4BY1K 1Y1WC 4BY7K 2R93C 4A3KK 3RZOK 5TMFA 4Q5SA 4QIWL 3HOUK 3PO3K 1HQMA 4QJVA 5C4JC 3WODA 1SMYA 3HOZK 5FJ8K 3S2DC 2NVYK 2JA5C 2JA5K 1TWHC 2NVTK 2VUMC 2BE5A 2YU9K 4GZYA 2R92K 2VUMK 4A3DC 4JK1A 2WB1L 4QJVB 1TWGK 2PA8L 2PMZL 4A93C 4C2MC 4A3IK 4AYBL 3S1MK 5D4DA 4A3JC 1XPPA 3GTOK 1I50K 1IW7A 4OIQA 3S14K 3H3VD 3S1RK 1Y1VC 3CQZK 1SFOC 1K83K 4A3GC 5IP7C 4Y7NC 2O5IA 4C3IK 5M5XK 4X6AK 4XLNA 3K7AC 5FLMC 3S1NC 3S1NK 4A3EC 1Y1WK 3S1QC 2R93K 4BBRC 3PO2C 4G7ZA 4NOIA 2JA7C 4C3HC 4BXXC 5M5YK 2JA7K 3HOYK 5IYDC 3I4MC 4BBSC 4OIPA 3HKZL 3S15C 5C4JK 1ZYRA 4MEXA 3HOVC 4YG2A 2PPBA 3S2DK 1TWFC 4A3BC 4YFXA 5IYBC 1TWHK 5IYBK 4A3BK 4LK1A 2O5JA 5C44C 3HOWC 3H3VL 3M4OC 4A3DK 4A3FC 4A3FK 1I6HC 1I6HK 4XLPA 2E2HC 2R7ZC 3GTKC 3HOYC 2E2HK 3GTKK 2R7ZK 4C2MK 4A93K 3HOXC 2CW0A 4KN7A 4A3JK 1WCMC 1YNJA 4A3LC 2A68A 3RZDC 1I3QC 1R9TC 4G7OA 1Y1VK 3RZDK 4LLGA 3S16C 1SFOK 4ZH4A 5IP7K 4Y7NK 4A3GK 3GTMC 3K7AK 5FLMK 3GTQC 4C3JC 5C3EC 4A3EK 5M3MK 3S1QK 4BBRK 3PO2K 2NVQC 4BXXK 4C3HK 4Y52K 4A3MC 4A3CC 3I4MK 4QIWD 4BBSK 2JA8C 3GTPC 2A6HA 3S2HC 3S15K 3HOVK 1TWFK 4XSZA 2E2JC 3H0GC 3H0GK 4MEYA 5C44K 3GTLC 3HOWK 3M4OK 3GTJC 5IYCC 4KN4A 3EQLA 3M3YC 3FKIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y0S D;  3HOX K;  3I4N C;  1I6V A;  1WCM K;  1YNN A;  4BY7 C;  4A3L K;  4MQ9 A;  1I3Q K;  1R9T K;  3S16 K;  4A3K C;  3RZO C;  2WAQ D;  4YFN A;  3GTM K;  3HOU C;  3GTQ K;  3PO3 C;  4C3J K;  5C3E K;  3HOZ C;  3GTJ K;  5IP9 C;  5IP9 K;  2NVY C;  2A69 A;  4OIN A;  3DXJ A;  2NVQ K;  5IYD K;  4LJZ A;  2NVT C;  4A3M K;  4A3C K;  4G7H A;  2YU9 C;  2B63 C;  2R92 C;  2B63 K;  2JA8 K;  3GTP K;  3S2H K;  1TWC C;  3HKZ D;  1TWC K;  3GTG C;  3GTG K;  1TWG C;  2Y0S L;  4XSX A;  4KMU A;  2E2I C;  2NVX C;  2E2J K;  2E2I K;  2JA6 C;  4A3I C;  2NVX K;  2JA6 K;  3S1M C;  5TMC A;  4OIR A;  3GTO C;  3GTL K;  1I50 C;  4YFK A;  3S14 C;  4OIO A;  3S1R C;  2WAQ L;  2WB1 D;  3CQZ C;  1K83 C;  4Y52 C;  3FKI K;  5IYC K;  1BDF A;  5M3F K;  2PA8 D;  4C3I C;  5M5W K;  3M3Y K;  1TWA C;  2PMZ D;  4X6A C;  3S17 C;  1TWA K;  4LK0 A;  5C4X C;  5C4X K;  3I4N K;  4AYB D;  3S17 K;  4Q4Z A;  2A6E A;  4BY1 C;  4BY1 K;  1Y1W C;  4BY7 K;  2R93 C;  4A3K K;  3RZO K;  5TMF A;  4Q5S A;  4QIW L;  3HOU K;  3PO3 K;  1HQM A;  4QJV A;  5C4J C;  3WOD A;  1SMY A;  3HOZ K;  5FJ8 K;  3S2D C;  2NVY K;  2JA5 C;  2JA5 K;  1TWH C;  2NVT K;  2VUM C;  2BE5 A;  2YU9 K;  4GZY A;  2R92 K;  2VUM K;  4A3D C;  4JK1 A;  2WB1 L;  4QJV B;  1TWG K;  2PA8 L;  2PMZ L;  4A93 C;  4C2M C;  4A3I K;  4AYB L;  3S1M K;  5D4D A;  4A3J C;  1XPP A;  3GTO K;  1I50 K;  1IW7 A;  4OIQ A;  3S14 K;  3H3V D;  3S1R K;  1Y1V C;  3CQZ K;  1SFO C;  1K83 K;  4A3G C;  5IP7 C;  4Y7N C;  2O5I A;  4C3I K;  5M5X K;  4X6A K;  4XLN A;  3K7A C;  5FLM C;  3S1N C;  3S1N K;  4A3E C;  1Y1W K;  3S1Q C;  2R93 K;  4BBR C;  3PO2 C;  4G7Z A;  4NOI A;  2JA7 C;  4C3H C;  4BXX C;  5M5Y K;  2JA7 K;  3HOY K;  5IYD C;  3I4M C;  4BBS C;  4OIP A;  3HKZ L;  3S15 C;  5C4J K;  1ZYR A;  4MEX A;  3HOV C;  4YG2 A;  2PPB A;  3S2D K;  1TWF C;  4A3B C;  4YFX A;  5IYB C;  1TWH K;  5IYB K;  4A3B K;  4LK1 A;  2O5J A;  5C44 C;  3HOW C;  3H3V L;  3M4O C;  4A3D K;  4A3F C;  4A3F K;  1I6H C;  1I6H K;  4XLP A;  2E2H C;  2R7Z C;  3GTK C;  3HOY C;  2E2H K;  3GTK K;  2R7Z K;  4C2M K;  4A93 K;  3HOX C;  2CW0 A;  4KN7 A;  4A3J K;  1WCM C;  1YNJ A;  4A3L C;  2A68 A;  3RZD C;  1I3Q C;  1R9T C;  4G7O A;  1Y1V K;  3RZD K;  4LLG A;  3S16 C;  1SFO K;  4ZH4 A;  5IP7 K;  4Y7N K;  4A3G K;  3GTM C;  3K7A K;  5FLM K;  3GTQ C;  4C3J C;  5C3E C;  4A3E K;  5M3M K;  3S1Q K;  4BBR K;  3PO2 K;  2NVQ C;  4BXX K;  4C3H K;  4Y52 K;  4A3M C;  4A3C C;  3I4M K;  4QIW D;  4BBS K;  2JA8 C;  3GTP C;  2A6H A;  3S2H C;  3S15 K;  3HOV K;  1TWF K;  4XSZ A;  2E2J C;  3H0G C;  3H0G K;  4MEY A;  5C44 K;  3GTL C;  3HOW K;  3M4O K;  3GTJ C;  5IYC C;  4KN4 A;  3EQL A;  3M3Y C;  3FKI C; 
#chains in the Genus database with same CATH topology
 4BKW A;  3PIP S;  3HOX K;  1WCM K;  1YNN A;  1I3Q K;  1R9T K;  1KQ4 A;  3RZO C;  3L4K A;  1FEU A;  5IP9 K;  2NVY C;  4A3C K;  3G4C A;  3FKI A;  2YU9 C;  2B63 K;  3S2H K;  2RGR A;  2Y0S L;  4KMU A;  5JFE A;  2NVX K;  2JA6 K;  3S1M C;  5IOQ A;  3GTJ K;  5IYC K;  3CQZ C;  1K83 C;  4Y52 C;  3FKI K;  5M3F K;  3M3Y K;  1F93 A;  4GTE A;  3AQP A;  1TWA K;  3S17 C;  4BY1 C;  1GE9 A;  3GTG A;  3GEI A;  3HOU K;  2E2I A;  4QJV A;  1DD5 A;  4LOW A;  4P5A A;  3WOD A;  3GTL A;  2P8T A;  2VUM K;  1F7U A;  2EBB A;  2ZFZ A;  4QJV B;  1TWG K;  3TFI A;  2PMZ L;  1Y1W A;  3FHZ A;  1XPP A;  1I50 K;  3S14 K;  5DM6 S;  4Y7N C;  2P5M A;  2NVY A;  1HI9 A;  1O29 A;  3K7A C;  2JA5 A;  1Y1W K;  2YU9 A;  4KAW X;  2JA7 C;  5IYD C;  3I4M C;  1WOS A;  3HKZ L;  3S15 C;  3HOV C;  3N3Y A;  3S2D K;  3BUE A;  5E68 A;  1TWF C;  3FOF A;  3V4G A;  3CQZ A;  4YFX A;  1K83 A;  4A3B K;  2XCQ A;  3TFJ A;  4LK1 A;  4GTB A;  3HOW C;  3H3V L;  3M4O C;  3LAP A;  2Y3P A;  4LQY A;  3JST A;  4IOC S;  1RU0 A;  4LR2 A;  2E2H C;  4WFA S;  3GTK C;  4A93 K;  4J3N A;  3HOX C;  4A3J K;  2KPU A;  1WCM C;  4GTD A;  1WOO A;  1I3Q C;  1R9T C;  1WSR A;  4KC6 A;  4A3G K;  1L0W A;  2GSO A;  3GEH A;  4KMD A;  5FLM K;  1VGX A;  1O2A A;  4BXX K;  5L46 A;  1J6W A;  4A3C C;  1YCL A;  3S2H C;  3GEE A;  3OPF A;  1IL2 A;  3H0G K;  3SZY A;  3GTM A;  3GTJ C;  3A8J A;  5IYC C;  3HOY K;  3EQL A;  3M3Y C;  3FKI C;  1PJ6 A;  4PAA A;  4MQ9 A;  1EQR A;  1O2F B;  2WAQ D;  1X31 C;  2V6U A;  1TWF A;  3GTM K;  3HOU C;  3GTQ K;  4PAB A;  5HQH A;  2KXY A;  3DXJ A;  2NVQ K;  4FM9 A;  4IO9 S;  4A3M K;  2GSN A;  1O2B A;  3HKZ D;  1TWC K;  1WCM A;  3GTG C;  1TWG C;  4XSX A;  2E2I C;  2E2J K;  1I3Q A;  1R9T A;  4WIL A;  1I50 C;  3S14 C;  4OIO A;  1YX2 A;  4KDD A;  5C4X K;  4FZB A;  4Q4Z A;  1Y1W C;  2B63 A;  4A3K K;  4QIW L;  4Q5S A;  2NVX A;  2JA6 A;  3HOZ K;  3S2D C;  1B4B A;  3HXA A;  2JA5 C;  3GTJ A;  2NVT K;  1XZQ B;  4KMA A;  2R92 K;  2BE5 A;  1TWA A;  4WJ3 M;  2WB1 L;  4JK1 A;  3ADA C;  2ZUF A;  1IQ0 A;  2PA8 L;  3CF5 S;  4A93 C;  5CJ9 A;  4KAT A;  5CHP A;  2R93 A;  4AYB L;  4A3J C;  3GTO K;  1XZP B;  1BJT A;  4DDQ A;  4A3G C;  4X6A K;  5FLM C;  1O28 A;  3L4J A;  4G0V A;  3S1N K;  2VUM A;  2ZJR S;  3GIR A;  2R93 K;  4BXX C;  1TWG A;  2GAG C;  4GT9 A;  1J6X A;  1ZYR A;  3FOE A;  1PJ5 A;  4ILD A;  4YG2 A;  1I50 A;  5IYB K;  1SFO A;  1G51 A;  2KQ1 A;  1O24 A;  2O5J A;  4A3D K;  4A3F K;  1I6H K;  3HOY C;  2R7Z K;  3AQO A;  5JVG S;  1JOE A;  3T00 A;  2A68 A;  3RZD K;  5JVO A;  1SFO K;  4LLG A;  5IP7 K;  3GTM C;  5EGH A;  3GTQ C;  4BLA A;  3LYW A;  4BBR K;  3PO2 K;  3NUH A;  2NVQ C;  1JQW A;  5HL8 A;  4C3H K;  4A3M C;  4BBS K;  4QIW D;  2A6H A;  2V6S A;  1VH2 A;  1XXA A;  1VRQ C;  2E2J C;  3BP8 C;  4KMH A;  5C44 K;  1WOP A;  3TTG A;  5IOR A;  2V6T A;  2Y0S D;  3A8K A;  1ISE A;  4A3L K;  3GTP A;  1EK8 A;  1B4A A;  3S16 K;  4A3K C;  2FQT A;  4YFN A;  5C3E K;  3HOZ C;  3H0G A;  5IP9 C;  4OIN A;  2A69 A;  3T01 A;  2NVT C;  1WIH A;  3S0X A;  3GTP K;  2R92 C;  2B63 C;  1EI6 A;  4KM9 A;  2NVX C;  2JA6 C;  3IPJ A;  5TMC A;  3GTO C;  3GTQ A;  5JVH S;  2CFA B;  3GDZ A;  4Y52 K;  3AD8 C;  1BDF A;  1AB4 A;  1ZVU A;  1TWA C;  2PMZ D;  4X6A C;  3I4N K;  3S17 K;  2A6E A;  4BY7 K;  4BY1 K;  3N0B A;  2R93 C;  1VJE A;  1TWC A;  5TMF A;  3SZZ A;  3PO3 K;  1HQM A;  4G0U A;  1SMY A;  1WQH A;  2FQO A;  4KAR A;  4G0W A;  1VLO A;  1BS2 A;  2VUM C;  3TFH A;  4GZY A;  4A3D C;  4GTF A;  3QX3 A;  4A3I K;  4O2D A;  1IW7 A;  3H3V D;  3S1R K;  1SFO C;  5IP7 C;  4C3I K;  5M5X K;  1JVI A;  3LAJ A;  5IOT A;  2R92 A;  4BBR C;  1XZQ A;  3PO2 C;  4NOI A;  4C3H C;  5M5Y K;  2JA7 K;  4KB2 A;  4BBS C;  4OIP A;  4WFB S;  5C4J K;  3GTO A;  1J98 A;  1ZXO A;  1XZP A;  4A3B C;  1TWH K;  1XXC A;  1O26 A;  1WQF A;  5HL7 S;  5C44 C;  4XLP A;  3N0C A;  2E2H K;  3GTK K;  4KAS A;  4C2M K;  2CW0 A;  4KN7 A;  2W7V A;  1O27 A;  4A3L C;  1INN A;  4G7O A;  1Y1V K;  1USO A;  3S16 C;  3DLL S;  4KB4 A;  2KWA A;  3PIO S;  5C3E C;  4A3E K;  1WOR A;  3AH5 A;  3S1Q K;  1IBA A;  2R7Z A;  3GTP C;  2L5N A;  4AH6 A;  3GSI A;  1O25 A;  3H0G C;  4MEY A;  3OEP A;  4KN4 A;  3ERE D;  3I4N C;  1BGW A;  1I6V A;  1WSV A;  1XXB A;  4BY7 C;  4C45 A;  1EH1 A;  4GTC A;  1UV7 A;  3PO3 C;  4C3J K;  4IOA S;  4LJZ A;  4G7H A;  2JA8 K;  2XCO A;  4XCH A;  1TWC C;  3GTG K;  4GFQ A;  2E2I K;  4A3I C;  2GAH C;  4OIR A;  3GTL K;  4YFK A;  3S1R C;  2WAQ L;  2WB1 D;  1ZQ1 C;  3BP3 A;  2PA8 D;  4C3I C;  5M5W K;  4LK0 A;  5C4X C;  4WF9 S;  4RMF A;  4AYB D;  2D6F C;  3RZO K;  4WFN S;  3ORE A;  5TJ3 A;  3Q3Q A;  5C4J C;  5FJ8 K;  4GTA A;  2NVY K;  1F7V A;  1IE0 A;  3VA7 A;  2JA5 K;  1TWH C;  2YU9 K;  2CFA A;  2ZUE A;  1ZBS A;  4P5B A;  4C2M C;  3S1M K;  1IS1 A;  5D4D A;  2GSU A;  4OIQ A;  3LPX A;  1Y1V C;  3CQZ K;  1K83 K;  3MML B;  2O5I A;  4XLN A;  3S1N C;  5IOS A;  4WCE S;  4A3E C;  3S1Q C;  4G7Z A;  2JH3 A;  4MEX A;  3AD7 C;  2PPB A;  1EFW A;  4P9S A;  3CAG A;  5IYB C;  1DCH A;  4A3F C;  1J6V A;  3T02 A;  1I6H C;  2R7Z C;  5EGE A;  1V5V A;  2PHC B;  5DM7 S;  3AD9 C;  1DCO A;  2JA7 A;  1YNJ A;  1WQG A;  3RZD C;  4GTL A;  3A8I A;  4U67 S;  1PJ7 A;  4ZH4 A;  4Y7N K;  3G4A A;  3K7A K;  4C3J C;  1F9N A;  1TWH A;  1DCP A;  1USM A;  5M3M K;  4BLB A;  2L3U A;  3GTK A;  2RH6 A;  3I4M K;  2E2H A;  4WJ4 A;  5IYD K;  2JA8 C;  3S15 K;  3HOV K;  2ZJP S;  1TWF K;  4XSZ A;  1Y1V A;  2ZJQ S;  4M1X A;  3GTL C;  2XCR B;  3HOW K;  3M4O K;  1C0A A;  4KM8 A; 
#chains in the Genus database with same CATH homology
 2Y0S D;  3HOX K;  3I4N C;  1I6V A;  1WCM K;  1YNN A;  4BY7 C;  4A3L K;  4MQ9 A;  1I3Q K;  1R9T K;  3S16 K;  4A3K C;  3RZO C;  2WAQ D;  4YFN A;  3GTM K;  3HOU C;  3GTQ K;  3PO3 C;  4C3J K;  5C3E K;  3HOZ C;  3GTJ K;  5IP9 C;  5IP9 K;  2NVY C;  2A69 A;  4OIN A;  3DXJ A;  2NVQ K;  5IYD K;  4LJZ A;  2NVT C;  4A3M K;  4A3C K;  4G7H A;  2YU9 C;  2B63 C;  2R92 C;  2B63 K;  2JA8 K;  3GTP K;  3S2H K;  1TWC C;  3HKZ D;  1TWC K;  3GTG C;  3GTG K;  1TWG C;  2Y0S L;  4XSX A;  4KMU A;  2E2I C;  2NVX C;  2E2J K;  2E2I K;  2JA6 C;  4A3I C;  2NVX K;  2JA6 K;  3S1M C;  5TMC A;  4OIR A;  3GTO C;  3GTL K;  1I50 C;  4YFK A;  3S14 C;  4OIO A;  3S1R C;  2WAQ L;  2WB1 D;  3CQZ C;  1K83 C;  4Y52 C;  3FKI K;  5IYC K;  1BDF A;  5M3F K;  2PA8 D;  4C3I C;  5M5W K;  3M3Y K;  1TWA C;  2PMZ D;  4X6A C;  3S17 C;  1TWA K;  4LK0 A;  5C4X C;  5C4X K;  3I4N K;  4AYB D;  3S17 K;  4Q4Z A;  2A6E A;  4BY1 C;  4BY1 K;  1Y1W C;  4BY7 K;  2R93 C;  4A3K K;  3RZO K;  5TMF A;  4Q5S A;  4QIW L;  3HOU K;  3PO3 K;  1HQM A;  4QJV A;  5C4J C;  3WOD A;  1SMY A;  3HOZ K;  5FJ8 K;  3S2D C;  2NVY K;  2JA5 C;  2JA5 K;  1TWH C;  2NVT K;  2VUM C;  2BE5 A;  2YU9 K;  4GZY A;  2R92 K;  2VUM K;  4A3D C;  4JK1 A;  2WB1 L;  4QJV B;  1TWG K;  2PA8 L;  2PMZ L;  4A93 C;  4C2M C;  4A3I K;  4AYB L;  3S1M K;  5D4D A;  4A3J C;  1XPP A;  3GTO K;  1I50 K;  1IW7 A;  4OIQ A;  3S14 K;  3H3V D;  3S1R K;  1Y1V C;  3CQZ K;  1SFO C;  1K83 K;  4A3G C;  5IP7 C;  4Y7N C;  2O5I A;  4C3I K;  5M5X K;  4X6A K;  4XLN A;  3K7A C;  5FLM C;  3S1N C;  3S1N K;  4A3E C;  1Y1W K;  3S1Q C;  2R93 K;  4BBR C;  3PO2 C;  4G7Z A;  4NOI A;  2JA7 C;  4C3H C;  4BXX C;  5M5Y K;  2JA7 K;  3HOY K;  5IYD C;  3I4M C;  4BBS C;  4OIP A;  3HKZ L;  3S15 C;  5C4J K;  1ZYR A;  4MEX A;  3HOV C;  4YG2 A;  2PPB A;  3S2D K;  1TWF C;  4A3B C;  4YFX A;  5IYB C;  1TWH K;  5IYB K;  4A3B K;  4LK1 A;  2O5J A;  5C44 C;  3HOW C;  3H3V L;  3M4O C;  4A3D K;  4A3F C;  4A3F K;  1I6H C;  1I6H K;  4XLP A;  2E2H C;  2R7Z C;  3GTK C;  3HOY C;  2E2H K;  3GTK K;  2R7Z K;  4C2M K;  4A93 K;  3HOX C;  2CW0 A;  4KN7 A;  4A3J K;  1WCM C;  1YNJ A;  4A3L C;  2A68 A;  3RZD C;  1I3Q C;  1R9T C;  4G7O A;  1Y1V K;  3RZD K;  4LLG A;  3S16 C;  1SFO K;  4ZH4 A;  5IP7 K;  4Y7N K;  4A3G K;  3GTM C;  3K7A K;  5FLM K;  3GTQ C;  4C3J C;  5C3E C;  4A3E K;  5M3M K;  3S1Q K;  4BBR K;  3PO2 K;  2NVQ C;  4BXX K;  4C3H K;  4Y52 K;  4A3M C;  4A3C C;  3I4M K;  4QIW D;  4BBS K;  2JA8 C;  3GTP C;  2A6H A;  3S2H C;  3S15 K;  3HOV K;  1TWF K;  4XSZ A;  2E2J C;  3H0G C;  3H0G K;  4MEY A;  5C44 K;  3GTL C;  3HOW K;  3M4O K;  3GTJ C;  5IYC C;  4KN4 A;  3EQL A;  3M3Y C;  3FKI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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