4A3GC

Rna polymerase ii initial transcribing complex with a 2nt dna-rna hybrid
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 53
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3gC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3gC01
2A69A 2A68A 4LK0A 2WAQL 2R93K 2B63K 4A3LC 3S14C 3RZDK 4A3JC 4QJVA 4A93C 1BDFA 4C3IC 5IYCK 4BY1K 3DXJA 1I3QC 3S1NC 3M4OC 3FKIK 5IYDC 3HOWK 2NVQK 4XSXA 5FLMC 4A3MC 3S1RC 4MEXA 4BBRC 4BBSC 5M3MK 3PO3C 2NVYC 4A3BC 5C3EK 3CQZC 4C2MC 4BY7K 2JA8K 3S16K 3HOVK 5C4XK 2YU9K 2A6HA 4XLNA 4A3FC 2JA6C 3GTLK 3GTPK 4Y7NC 1TWFK 3RZOK 4A3IC 2O5JA 3GTOC 3GTKC 1TWGK 4KN4A 3H3VD 4ZH4A 1R9TK 2JA5C 1Y1WC 4A3EK 4X6AK 1TWHC 2E2JK 3S1QK 1YNNA 3H3VL 4JK1A 1TWAC 2PMZL 4OIOA 4Y52C 5C44K 3HKZL 4QJVB 4A3GK 4LLGA 3H0GK 4Q4ZA 3GTMK 4LJZA 3EQLA 3S1QC 2E2HC 2E2JC 2R92C 4X6AC 3HOXC 4XLPA 5M3FK 5IP9C 2O5IA 3S15K 3S17K 3WODA 1R9TC 3HOYC 4BXXC 1TWGC 5TMCA 1IW7A 4YFNA 4A3IK 4BXXK 1TWFC 5M5XK 4Y7NK 1SMYA 3GTPC 3HOYK 3S17C 3S15C 5IP9K 2JA6K 2YU9C 3HOXK 1ZYRA 4OIRA 2WB1D 2R92K 2BE5A 2NVYK 2E2HK 4A3BK 1I6VA 4BBRK 1SFOC 3S16C 3GTMC 5M5YK 3H0GC 5IYDK 4A3GC 4AYBD 3M4OK 5C44C 4Y52K 4GZYA 2WAQD 1TWAK 1SFOK 4A3JK 3RZDC 3S14K 4A3LK 1TWHK 5TMFA 3I4MC 4C3JK 4QIWL 4A3EC 2WB1L 1Y1WK 2JA5K 4MQ9A 4G7OA 1HQMA 3GTKK 3GTOK 5D4DA 1WCMC 3RZOC 5IP7K 4NOIA 3GTQC 1Y1VK 4A3KC 5FJ8K 3GTLC 3GTGC 4A3FK 4YG2A 3HOVC 4KMUA 5C4XC 2E2IK 4OINA 2JA8C 3I4MK 3CQZK 5C3EC 4C2MK 4A3CC 3M3YK 4BY7C 3S2HK 3PO3K 3S1RK 1K83K 4BBSK 5FLMK 2NVQC 4A3MK 1I6HK 3HOWC 4A3DK 2A6EA 3FKIC 4OIQA 3I4NC 3S1NK 1I3QK 2NVTC 1TWCC 5IYCC 4BY1C 4C3IK 2JA7K 2R7ZC 4A93K 2VUMC 1I50C 3S1MC 4YFXA 4LK1A 2B63C 2PMZD 3HKZD 3S2DC 2R93C 2PA8L 3GTJK 3GTJC 2PPBA 1I50K 3S1MK 3S2DK 2VUMK 4OIPA 2R7ZK 2Y0SD 5IYBK 2JA7C 3PO2C 1TWCK 2NVTK 3HOZC 4C3HK 3I4NK 4KN7A 5C4JC 4A3DC 4XSZA 1I6HC 2NVXK 1K83C 5M5WK 4QIWD 3S2HC 2CW0A 3HOUK 3M3YC 3K7AC 2Y0SL 1XPPA 4A3CK 2PA8D 2E2IC 3GTGK 4G7ZA 3K7AK 4A3KK 1Y1VC 3HOUC 4YFKA 3GTQK 5IP7C 2NVXC 4Q5SA 1WCMK 5C4JK 4AYBL 4MEYA 4C3HC 3HOZK 4G7HA 3PO2K 5IYBC 4C3JC 1YNJA
chains in the Genus database with same CATH superfamily
2WAQL 2R93K 4A3LC 3S14C 1EQRA 3TTGA 1WQHA 3DXJA 3M4OC 3HOWK 1TWGA 4BBSC 4BY7K 2NVYC 4A3BC 4C2MC 3HOVK 5C4XK 2JA6C 4XLNA 2FQTA 5IOSA 1DCPA 2ZJRS 4WJ3M 3FKIA 4WFNS 4KMAA 2JA5C 1B4BA 1VGXA 3DLLS 4X6AK 3GTLA 3S1QK 4GFQA 3H3VL 1TWAC 4OIOA 1DD5A 1WSVA 1O24A 5C44K 3CF5S 3A8JA 4KATA 4LJZA 5E68A 4KASA 4XLPA 2GSOA 5IP9C 2O5IA 1AB4A 2RH6A 1FEUA 4BXXC 1IW7A 4GTAA 1USMA 5M5XK 2JA6K 2YU9C 3AQOA 1F7VA 2WB1D 1IQ0A 4A3BK 2CFAA 2E2HK 2KPUA 3GTMC 1O2FB 5IORA 4G0WA 4KB4A 2GAGC 4GTEA 1O28A 4GZYA 3TFHA 2JA6A 4A3JK 3S14K 2E2HA 1G51A 1XZPB 3ADAC 4AH6A 4U67S 2E2IA 1JOEA 4G7OA 3GTKK 3GTOK 4NOIA 5IOTA 4A3FK 2E2IK 3HOVC 2JA8C 3GTJA 4C2MK 5C3EC 2GSNA 3M3YK 4BY7C 2FQOA 4WFAS 3S2HK 1VH2A 1K83K 1WOOA 4A3DK 3S1NK 2JA7K 1RU0A 2D6FC 2VUMC 4BLBA 4A93K 2PA8L 3GTJK 3HKZD 4M1XA 1K83A 3S1MK 1XXCA 4KM9A 3NUHA 2NVTK 3HOZC 3T01A 2JA7A 4KN7A 5C4JC 4LOWA 3TFIA 3S2HC 4J3NA 3LYWA 3GTGK 3S0XA 3K7AK 4YFKA 5IP7C 3A8KA 3N0BA 2NVXA 1EK8A 4G7HA 5IYBC 4WF9S 1USOA 3IPJA 2V6SA 1SFOA 2Y3PA 2A68A 4O2DA 2B63K 3RZDK 4QJVA 1BDFA 5JVHS 3S1NC 1O26A 5IYDC 4IOCS 2NVQK 5FLMC 3GSIA 3S1RC 5C3EK 3CQZC 2ZJPS 1VJEA 4BKWA 2YU9K 4A3FC 4GTBA 3LAJA 1WOSA 4A3IC 2O5JA 3GTKC 4ZH4A 4A3EK 2YU9A 1TWHC 1YNNA 1TWFA 4FM9A 2PMZL 5HL7S 1ISEA 1IL2A 3HKZL 5TJ3A 3EQLA 3S1QC 2E2HC 2E2JC 1VLOA 4X6AC 2R92A 3WODA 5L46A 3AD8C 1XXBA 4Y7NK 1SMYA 3GTPC 4GTFA 5HQHA 3S17C 3HOYK 3S15C 1WQFA 3HOXK 1ZYRA 1J6XA 2R92K 2BE5A 3GIRA 4GT9A 1I6VA 4BBRK 1SFOC 3H0GC 1Y1WA 5IYDK 5C44C 3BUEA 3CAGA 3PIPS 2WAQD 3RZDC 3AH5A 1WQGA 1TWHK 1ZVUA 2P8TA 5TMFA 1O2AA 3A8IA 1DCOA 2V6UA 3FOEA 4MQ9A 5JFEA 5D4DA 2V6TA 4A3KC 1TWHA 5FJ8K 3GTLC 5JVOA 1XZQB 4KMUA 4OINA 3CQZK 1EH1A 4WJ4A 4BBSK 5FLMK 1I6HK 2KXYA 3HOWC 4OIQA 1I3QK 1TWCC 1Y1VA 4RMFA 3BP8C 4KARA 1DCHA 4YFXA 4LK1A 5EGEA 3AD9C 3GDZA 2PPBA 4WFBS 2R7ZK 5IYBK 1TWCK 3OREA 4KMHA 4A3DC 3T02A 3V4GA 2XCRB 5M5WK 1EFWA 4A3CK 3M3YC 1F9NA 1J6WA 2Y0SL 3BP3A 3FHZA 2R7ZA 4P5BA 2R93A 3GTQK 2GSUA 5JVGS 2NVXC 4MEYA 3HOZK 1PJ6A 3PO2K 2A69A 3FKIK 1XZPA 1IS1A 4XSXA 3JSTA 5M3MK 5M3FK 3S16K 4BBRC 3PO3C 3GTLK 4Y7NC 1TWGK 2CFAB 4WCES 3H3VD 3TFJA 2W7VA 1Y1WC 1ZQ1C 3H0GA 1WORA 2PHCB 2GAHC 3VA7A 1BS2A 4Y52C 1WOPA 4QJVB 3H0GK 2L5NA 1F93A 3GTMK 2RGRA 2L3UA 3FOFA 3S15K 2NVYA 3HOYC 1O29A 5TMCA 4YFNA 4A3IK 3SZZA 4BXXK 3GTMA 3QX3A 4KMDA 4IOAS 3MMLB 2NVYK 3G4AA 3S16C 1YCLA 3M4OK 5HL8A 4KB2A 3L4KA 3GEHA 4KAWX 3L4JA 3GTKA 4A3LK 1BJTA 3SZYA 4QIWL 4A3EC 2JA5K 3N3YA 4WILA 1UV7A 4KDDA 3OPFA 1WCMC 5EGHA 1IBAA 1L0WA 4YG2A 5C4XC 1GE9A 1JVIA 2JA5A 4A3CC 3OEPA 3S1RK 3GTOA 3FKIC 1KQ4A 3AQPA 2NVTC 5CJ9A 4BY1C 3HXAA 4C3IK 4LR2A 1I50C 3S2DC 2B63C 2PMZD 2R93C 3GTJC 1O27A 4GTDA 3GTGA 4OIPA 4KC6A 4C3HK 3I4NK 2XCQA 4XSZA 2NVXK 1ZXOA 1XPPA 2PA8D 2E2IC 1IE0A 1B4AA 1ZBSA 4BLAA 4G7ZA 4C45A 4A3KK 1Y1VC 4Q5SA 1WCMK 1J6VA 5C4JK 4AYBL 4ILDA 1HI9A 4LQYA 2ZUFA 4PABA 3I4MK 3N0CA 2P5MA 4LK0A 2ZJQS 4KM8A 3Q3QA 4A3JC 1WCMA 4A93C 4C3IC 5IYCK 4BY1K 3PIOS 1I3QC 3ERED 4A3MC 1PJ7A 3T00A 1SFOK 4MEXA 1R9TA 1XXAA 2JA8K 2B63A 5CHPA 2A6HA 1O2BA 3GTPK 1TWFK 3RZOK 3GTOC 1F7UA 1O25A 4KN4A 1R9TK 5DM7S 2XCOA 2E2JK 3GTPA 2KWAA 4JK1A 3G4CA 4A3GK 4LLGA 4Q4ZA 2R92C 3HOXC 3S17K 1R9TC 1TWGC 4XCHA 1JQWA 1TWFC 4IO9S 4PAAA 2ZUEA 5DM6S 5IP9K 1TWAA 4G0VA 4FZBA 2ZFZA 4OIRA 1WSRA 1XZQA 5M5YK 4A3GC 4AYBD 1BGWA 4Y52K 1PJ5A 3LAPA 1TWAK 1X31C 2KQ1A 3I4MC 3LPXA 4C3JK 2WB1L 3GEEA 4DDQA 1Y1WK 3CQZA 1INNA 1YX2A 1HQMA 4P9SA 3RZOC 2JH3A 5IP7K 3GTQC 1Y1VK 3GTGC 5IOQA 3PO3K 1I50A 4A3MK 2NVQC 3AD7C 1VRQC 2A6EA 3I4NC 4P5AA 5IYCC 4G0UA 2R7ZC 1V5VA 3S1MC 3GEIA 4GTCA 1I50K 3S2DK 2VUMK 2Y0SD 2JA7C 3PO2C 1I3QA 3GTQA 4GTLA 1I6HC 1K83C 1C0AA 4QIWD 2CW0A 3HOUK 3K7AC 2VUMA 2EBBA 3HOUC 1WIHA 1TWCA 1J98A 4C3HC 1EI6A 4C3JC 1YNJA
chains in the Genus database with same CATH topology
2A69A 2A68A 4LK0A 2WAQL 2R93K 2B63K 4A3LC 3S14C 3RZDK 4A3JC 4QJVA 4A93C 1BDFA 4C3IC 5IYCK 4BY1K 3DXJA 1I3QC 3S1NC 3M4OC 3FKIK 5IYDC 3HOWK 2NVQK 4XSXA 5FLMC 4A3MC 3S1RC 4MEXA 4BBRC 4BBSC 5M3MK 3PO3C 2NVYC 4A3BC 5C3EK 3CQZC 4C2MC 4BY7K 2JA8K 3S16K 3HOVK 5C4XK 2YU9K 2A6HA 4XLNA 4A3FC 2JA6C 3GTLK 3GTPK 4Y7NC 1TWFK 3RZOK 4A3IC 2O5JA 3GTOC 3GTKC 1TWGK 4KN4A 3H3VD 4ZH4A 1R9TK 2JA5C 1Y1WC 4A3EK 4X6AK 1TWHC 2E2JK 3S1QK 1YNNA 3H3VL 4JK1A 1TWAC 2PMZL 4OIOA 4Y52C 5C44K 3HKZL 4QJVB 4A3GK 4LLGA 3H0GK 4Q4ZA 3GTMK 4LJZA 3EQLA 3S1QC 2E2HC 2E2JC 2R92C 4X6AC 3HOXC 4XLPA 5M3FK 5IP9C 2O5IA 3S15K 3S17K 3WODA 1R9TC 3HOYC 4BXXC 1TWGC 5TMCA 1IW7A 4YFNA 4A3IK 4BXXK 1TWFC 5M5XK 4Y7NK 1SMYA 3GTPC 3HOYK 3S17C 3S15C 5IP9K 2JA6K 2YU9C 3HOXK 1ZYRA 4OIRA 2WB1D 2R92K 2BE5A 2NVYK 2E2HK 4A3BK 1I6VA 4BBRK 1SFOC 3S16C 3GTMC 5M5YK 3H0GC 5IYDK 4A3GC 4AYBD 3M4OK 5C44C 4Y52K 4GZYA 2WAQD 1TWAK 1SFOK 4A3JK 3RZDC 3S14K 4A3LK 1TWHK 5TMFA 3I4MC 4C3JK 4QIWL 4A3EC 2WB1L 1Y1WK 2JA5K 4MQ9A 4G7OA 1HQMA 3GTKK 3GTOK 5D4DA 1WCMC 3RZOC 5IP7K 4NOIA 3GTQC 1Y1VK 4A3KC 5FJ8K 3GTLC 3GTGC 4A3FK 4YG2A 3HOVC 4KMUA 5C4XC 2E2IK 4OINA 2JA8C 3I4MK 3CQZK 5C3EC 4C2MK 4A3CC 3M3YK 4BY7C 3S2HK 3PO3K 3S1RK 1K83K 4BBSK 5FLMK 2NVQC 4A3MK 1I6HK 3HOWC 4A3DK 2A6EA 3FKIC 4OIQA 3I4NC 3S1NK 1I3QK 2NVTC 1TWCC 5IYCC 4BY1C 4C3IK 2JA7K 2R7ZC 4A93K 2VUMC 1I50C 3S1MC 4YFXA 4LK1A 2B63C 2PMZD 3HKZD 3S2DC 2R93C 2PA8L 3GTJK 3GTJC 2PPBA 1I50K 3S1MK 3S2DK 2VUMK 4OIPA 2R7ZK 2Y0SD 5IYBK 2JA7C 3PO2C 1TWCK 2NVTK 3HOZC 4C3HK 3I4NK 4KN7A 5C4JC 4A3DC 4XSZA 1I6HC 2NVXK 1K83C 5M5WK 4QIWD 3S2HC 2CW0A 3HOUK 3M3YC 3K7AC 2Y0SL 1XPPA 4A3CK 2PA8D 2E2IC 3GTGK 4G7ZA 3K7AK 4A3KK 1Y1VC 3HOUC 4YFKA 3GTQK 5IP7C 2NVXC 4Q5SA 1WCMK 5C4JK 4AYBL 4MEYA 4C3HC 3HOZK 4G7HA 3PO2K 5IYBC 4C3JC 1YNJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A69 A;  2A68 A;  4LK0 A;  2WAQ L;  2R93 K;  2B63 K;  4A3L C;  3S14 C;  3RZD K;  4A3J C;  4QJV A;  4A93 C;  1BDF A;  4C3I C;  5IYC K;  4BY1 K;  3DXJ A;  1I3Q C;  3S1N C;  3M4O C;  3FKI K;  5IYD C;  3HOW K;  2NVQ K;  4XSX A;  5FLM C;  4A3M C;  3S1R C;  4MEX A;  4BBR C;  4BBS C;  5M3M K;  3PO3 C;  2NVY C;  4A3B C;  5C3E K;  3CQZ C;  4C2M C;  4BY7 K;  2JA8 K;  3S16 K;  3HOV K;  5C4X K;  2YU9 K;  2A6H A;  4XLN A;  4A3F C;  2JA6 C;  3GTL K;  3GTP K;  4Y7N C;  1TWF K;  3RZO K;  4A3I C;  2O5J A;  3GTO C;  3GTK C;  1TWG K;  4KN4 A;  3H3V D;  4ZH4 A;  1R9T K;  2JA5 C;  1Y1W C;  4A3E K;  4X6A K;  1TWH C;  2E2J K;  3S1Q K;  1YNN A;  3H3V L;  4JK1 A;  1TWA C;  2PMZ L;  4OIO A;  4Y52 C;  5C44 K;  3HKZ L;  4QJV B;  4A3G K;  4LLG A;  3H0G K;  4Q4Z A;  3GTM K;  4LJZ A;  3EQL A;  3S1Q C;  2E2H C;  2E2J C;  2R92 C;  4X6A C;  3HOX C;  4XLP A;  5M3F K;  5IP9 C;  2O5I A;  3S15 K;  3S17 K;  3WOD A;  1R9T C;  3HOY C;  4BXX C;  1TWG C;  5TMC A;  1IW7 A;  4YFN A;  4A3I K;  4BXX K;  1TWF C;  5M5X K;  4Y7N K;  1SMY A;  3GTP C;  3HOY K;  3S17 C;  3S15 C;  5IP9 K;  2JA6 K;  2YU9 C;  3HOX K;  1ZYR A;  4OIR A;  2WB1 D;  2R92 K;  2BE5 A;  2NVY K;  2E2H K;  4A3B K;  1I6V A;  4BBR K;  1SFO C;  3S16 C;  3GTM C;  5M5Y K;  3H0G C;  5IYD K;  4A3G C;  4AYB D;  3M4O K;  5C44 C;  4Y52 K;  4GZY A;  2WAQ D;  1TWA K;  1SFO K;  4A3J K;  3RZD C;  3S14 K;  4A3L K;  1TWH K;  5TMF A;  3I4M C;  4C3J K;  4QIW L;  4A3E C;  2WB1 L;  1Y1W K;  2JA5 K;  4MQ9 A;  4G7O A;  1HQM A;  3GTK K;  3GTO K;  5D4D A;  1WCM C;  3RZO C;  5IP7 K;  4NOI A;  3GTQ C;  1Y1V K;  4A3K C;  5FJ8 K;  3GTL C;  3GTG C;  4A3F K;  4YG2 A;  3HOV C;  4KMU A;  5C4X C;  2E2I K;  4OIN A;  2JA8 C;  3I4M K;  3CQZ K;  5C3E C;  4C2M K;  4A3C C;  3M3Y K;  4BY7 C;  3S2H K;  3PO3 K;  3S1R K;  1K83 K;  4BBS K;  5FLM K;  2NVQ C;  4A3M K;  1I6H K;  3HOW C;  4A3D K;  2A6E A;  3FKI C;  4OIQ A;  3I4N C;  3S1N K;  1I3Q K;  2NVT C;  1TWC C;  5IYC C;  4BY1 C;  4C3I K;  2JA7 K;  2R7Z C;  4A93 K;  2VUM C;  1I50 C;  3S1M C;  4YFX A;  4LK1 A;  2B63 C;  2PMZ D;  3HKZ D;  3S2D C;  2R93 C;  2PA8 L;  3GTJ K;  3GTJ C;  2PPB A;  1I50 K;  3S1M K;  3S2D K;  2VUM K;  4OIP A;  2R7Z K;  2Y0S D;  5IYB K;  2JA7 C;  3PO2 C;  1TWC K;  2NVT K;  3HOZ C;  4C3H K;  3I4N K;  4KN7 A;  5C4J C;  4A3D C;  4XSZ A;  1I6H C;  2NVX K;  1K83 C;  5M5W K;  4QIW D;  3S2H C;  2CW0 A;  3HOU K;  3M3Y C;  3K7A C;  2Y0S L;  1XPP A;  4A3C K;  2PA8 D;  2E2I C;  3GTG K;  4G7Z A;  3K7A K;  4A3K K;  1Y1V C;  3HOU C;  4YFK A;  3GTQ K;  5IP7 C;  2NVX C;  4Q5S A;  1WCM K;  5C4J K;  4AYB L;  4MEY A;  4C3H C;  3HOZ K;  4G7H A;  3PO2 K;  5IYB C;  4C3J C;  1YNJ A; 
#chains in the Genus database with same CATH topology
 2WAQ L;  2R93 K;  4A3L C;  3S14 C;  1EQR A;  3TTG A;  1WQH A;  3DXJ A;  3M4O C;  3HOW K;  1TWG A;  4BBS C;  4BY7 K;  2NVY C;  4A3B C;  4C2M C;  3HOV K;  5C4X K;  2JA6 C;  4XLN A;  2FQT A;  5IOS A;  1DCP A;  2ZJR S;  4WJ3 M;  3FKI A;  4WFN S;  4KMA A;  2JA5 C;  1B4B A;  1VGX A;  3DLL S;  4X6A K;  3GTL A;  3S1Q K;  4GFQ A;  3H3V L;  1TWA C;  4OIO A;  1DD5 A;  1WSV A;  1O24 A;  5C44 K;  3CF5 S;  3A8J A;  4KAT A;  4LJZ A;  5E68 A;  4KAS A;  4XLP A;  2GSO A;  5IP9 C;  2O5I A;  1AB4 A;  2RH6 A;  1FEU A;  4BXX C;  1IW7 A;  4GTA A;  1USM A;  5M5X K;  2JA6 K;  2YU9 C;  3AQO A;  1F7V A;  2WB1 D;  1IQ0 A;  4A3B K;  2CFA A;  2E2H K;  2KPU A;  3GTM C;  1O2F B;  5IOR A;  4G0W A;  4KB4 A;  2GAG C;  4GTE A;  1O28 A;  4GZY A;  3TFH A;  2JA6 A;  4A3J K;  3S14 K;  2E2H A;  1G51 A;  1XZP B;  3ADA C;  4AH6 A;  4U67 S;  2E2I A;  1JOE A;  4G7O A;  3GTK K;  3GTO K;  4NOI A;  5IOT A;  4A3F K;  2E2I K;  3HOV C;  2JA8 C;  3GTJ A;  4C2M K;  5C3E C;  2GSN A;  3M3Y K;  4BY7 C;  2FQO A;  4WFA S;  3S2H K;  1VH2 A;  1K83 K;  1WOO A;  4A3D K;  3S1N K;  2JA7 K;  1RU0 A;  2D6F C;  2VUM C;  4BLB A;  4A93 K;  2PA8 L;  3GTJ K;  3HKZ D;  4M1X A;  1K83 A;  3S1M K;  1XXC A;  4KM9 A;  3NUH A;  2NVT K;  3HOZ C;  3T01 A;  2JA7 A;  4KN7 A;  5C4J C;  4LOW A;  3TFI A;  3S2H C;  4J3N A;  3LYW A;  3GTG K;  3S0X A;  3K7A K;  4YFK A;  5IP7 C;  3A8K A;  3N0B A;  2NVX A;  1EK8 A;  4G7H A;  5IYB C;  4WF9 S;  1USO A;  3IPJ A;  2V6S A;  1SFO A;  2Y3P A;  2A68 A;  4O2D A;  2B63 K;  3RZD K;  4QJV A;  1BDF A;  5JVH S;  3S1N C;  1O26 A;  5IYD C;  4IOC S;  2NVQ K;  5FLM C;  3GSI A;  3S1R C;  5C3E K;  3CQZ C;  2ZJP S;  1VJE A;  4BKW A;  2YU9 K;  4A3F C;  4GTB A;  3LAJ A;  1WOS A;  4A3I C;  2O5J A;  3GTK C;  4ZH4 A;  4A3E K;  2YU9 A;  1TWH C;  1YNN A;  1TWF A;  4FM9 A;  2PMZ L;  5HL7 S;  1ISE A;  1IL2 A;  3HKZ L;  5TJ3 A;  3EQL A;  3S1Q C;  2E2H C;  2E2J C;  1VLO A;  4X6A C;  2R92 A;  3WOD A;  5L46 A;  3AD8 C;  1XXB A;  4Y7N K;  1SMY A;  3GTP C;  4GTF A;  5HQH A;  3S17 C;  3HOY K;  3S15 C;  1WQF A;  3HOX K;  1ZYR A;  1J6X A;  2R92 K;  2BE5 A;  3GIR A;  4GT9 A;  1I6V A;  4BBR K;  1SFO C;  3H0G C;  1Y1W A;  5IYD K;  5C44 C;  3BUE A;  3CAG A;  3PIP S;  2WAQ D;  3RZD C;  3AH5 A;  1WQG A;  1TWH K;  1ZVU A;  2P8T A;  5TMF A;  1O2A A;  3A8I A;  1DCO A;  2V6U A;  3FOE A;  4MQ9 A;  5JFE A;  5D4D A;  2V6T A;  4A3K C;  1TWH A;  5FJ8 K;  3GTL C;  5JVO A;  1XZQ B;  4KMU A;  4OIN A;  3CQZ K;  1EH1 A;  4WJ4 A;  4BBS K;  5FLM K;  1I6H K;  2KXY A;  3HOW C;  4OIQ A;  1I3Q K;  1TWC C;  1Y1V A;  4RMF A;  3BP8 C;  4KAR A;  1DCH A;  4YFX A;  4LK1 A;  5EGE A;  3AD9 C;  3GDZ A;  2PPB A;  4WFB S;  2R7Z K;  5IYB K;  1TWC K;  3ORE A;  4KMH A;  4A3D C;  3T02 A;  3V4G A;  2XCR B;  5M5W K;  1EFW A;  4A3C K;  3M3Y C;  1F9N A;  1J6W A;  2Y0S L;  3BP3 A;  3FHZ A;  2R7Z A;  4P5B A;  2R93 A;  3GTQ K;  2GSU A;  5JVG S;  2NVX C;  4MEY A;  3HOZ K;  1PJ6 A;  3PO2 K;  2A69 A;  3FKI K;  1XZP A;  1IS1 A;  4XSX A;  3JST A;  5M3M K;  5M3F K;  3S16 K;  4BBR C;  3PO3 C;  3GTL K;  4Y7N C;  1TWG K;  2CFA B;  4WCE S;  3H3V D;  3TFJ A;  2W7V A;  1Y1W C;  1ZQ1 C;  3H0G A;  1WOR A;  2PHC B;  2GAH C;  3VA7 A;  1BS2 A;  4Y52 C;  1WOP A;  4QJV B;  3H0G K;  2L5N A;  1F93 A;  3GTM K;  2RGR A;  2L3U A;  3FOF A;  3S15 K;  2NVY A;  3HOY C;  1O29 A;  5TMC A;  4YFN A;  4A3I K;  3SZZ A;  4BXX K;  3GTM A;  3QX3 A;  4KMD A;  4IOA S;  3MML B;  2NVY K;  3G4A A;  3S16 C;  1YCL A;  3M4O K;  5HL8 A;  4KB2 A;  3L4K A;  3GEH A;  4KAW X;  3L4J A;  3GTK A;  4A3L K;  1BJT A;  3SZY A;  4QIW L;  4A3E C;  2JA5 K;  3N3Y A;  4WIL A;  1UV7 A;  4KDD A;  3OPF A;  1WCM C;  5EGH A;  1IBA A;  1L0W A;  4YG2 A;  5C4X C;  1GE9 A;  1JVI A;  2JA5 A;  4A3C C;  3OEP A;  3S1R K;  3GTO A;  3FKI C;  1KQ4 A;  3AQP A;  2NVT C;  5CJ9 A;  4BY1 C;  3HXA A;  4C3I K;  4LR2 A;  1I50 C;  3S2D C;  2B63 C;  2PMZ D;  2R93 C;  3GTJ C;  1O27 A;  4GTD A;  3GTG A;  4OIP A;  4KC6 A;  4C3H K;  3I4N K;  2XCQ A;  4XSZ A;  2NVX K;  1ZXO A;  1XPP A;  2PA8 D;  2E2I C;  1IE0 A;  1B4A A;  1ZBS A;  4BLA A;  4G7Z A;  4C45 A;  4A3K K;  1Y1V C;  4Q5S A;  1WCM K;  1J6V A;  5C4J K;  4AYB L;  4ILD A;  1HI9 A;  4LQY A;  2ZUF A;  4PAB A;  3I4M K;  3N0C A;  2P5M A;  4LK0 A;  2ZJQ S;  4KM8 A;  3Q3Q A;  4A3J C;  1WCM A;  4A93 C;  4C3I C;  5IYC K;  4BY1 K;  3PIO S;  1I3Q C;  3ERE D;  4A3M C;  1PJ7 A;  3T00 A;  1SFO K;  4MEX A;  1R9T A;  1XXA A;  2JA8 K;  2B63 A;  5CHP A;  2A6H A;  1O2B A;  3GTP K;  1TWF K;  3RZO K;  3GTO C;  1F7U A;  1O25 A;  4KN4 A;  1R9T K;  5DM7 S;  2XCO A;  2E2J K;  3GTP A;  2KWA A;  4JK1 A;  3G4C A;  4A3G K;  4LLG A;  4Q4Z A;  2R92 C;  3HOX C;  3S17 K;  1R9T C;  1TWG C;  4XCH A;  1JQW A;  1TWF C;  4IO9 S;  4PAA A;  2ZUE A;  5DM6 S;  5IP9 K;  1TWA A;  4G0V A;  4FZB A;  2ZFZ A;  4OIR A;  1WSR A;  1XZQ A;  5M5Y K;  4A3G C;  4AYB D;  1BGW A;  4Y52 K;  1PJ5 A;  3LAP A;  1TWA K;  1X31 C;  2KQ1 A;  3I4M C;  3LPX A;  4C3J K;  2WB1 L;  3GEE A;  4DDQ A;  1Y1W K;  3CQZ A;  1INN A;  1YX2 A;  1HQM A;  4P9S A;  3RZO C;  2JH3 A;  5IP7 K;  3GTQ C;  1Y1V K;  3GTG C;  5IOQ A;  3PO3 K;  1I50 A;  4A3M K;  2NVQ C;  3AD7 C;  1VRQ C;  2A6E A;  3I4N C;  4P5A A;  5IYC C;  4G0U A;  2R7Z C;  1V5V A;  3S1M C;  3GEI A;  4GTC A;  1I50 K;  3S2D K;  2VUM K;  2Y0S D;  2JA7 C;  3PO2 C;  1I3Q A;  3GTQ A;  4GTL A;  1I6H C;  1K83 C;  1C0A A;  4QIW D;  2CW0 A;  3HOU K;  3K7A C;  2VUM A;  2EBB A;  3HOU C;  1WIH A;  1TWC A;  1J98 A;  4C3H C;  1EI6 A;  4C3J C;  1YNJ A; 
#chains in the Genus database with same CATH homology
 2A69 A;  2A68 A;  4LK0 A;  2WAQ L;  2R93 K;  2B63 K;  4A3L C;  3S14 C;  3RZD K;  4A3J C;  4QJV A;  4A93 C;  1BDF A;  4C3I C;  5IYC K;  4BY1 K;  3DXJ A;  1I3Q C;  3S1N C;  3M4O C;  3FKI K;  5IYD C;  3HOW K;  2NVQ K;  4XSX A;  5FLM C;  4A3M C;  3S1R C;  4MEX A;  4BBR C;  4BBS C;  5M3M K;  3PO3 C;  2NVY C;  4A3B C;  5C3E K;  3CQZ C;  4C2M C;  4BY7 K;  2JA8 K;  3S16 K;  3HOV K;  5C4X K;  2YU9 K;  2A6H A;  4XLN A;  4A3F C;  2JA6 C;  3GTL K;  3GTP K;  4Y7N C;  1TWF K;  3RZO K;  4A3I C;  2O5J A;  3GTO C;  3GTK C;  1TWG K;  4KN4 A;  3H3V D;  4ZH4 A;  1R9T K;  2JA5 C;  1Y1W C;  4A3E K;  4X6A K;  1TWH C;  2E2J K;  3S1Q K;  1YNN A;  3H3V L;  4JK1 A;  1TWA C;  2PMZ L;  4OIO A;  4Y52 C;  5C44 K;  3HKZ L;  4QJV B;  4A3G K;  4LLG A;  3H0G K;  4Q4Z A;  3GTM K;  4LJZ A;  3EQL A;  3S1Q C;  2E2H C;  2E2J C;  2R92 C;  4X6A C;  3HOX C;  4XLP A;  5M3F K;  5IP9 C;  2O5I A;  3S15 K;  3S17 K;  3WOD A;  1R9T C;  3HOY C;  4BXX C;  1TWG C;  5TMC A;  1IW7 A;  4YFN A;  4A3I K;  4BXX K;  1TWF C;  5M5X K;  4Y7N K;  1SMY A;  3GTP C;  3HOY K;  3S17 C;  3S15 C;  5IP9 K;  2JA6 K;  2YU9 C;  3HOX K;  1ZYR A;  4OIR A;  2WB1 D;  2R92 K;  2BE5 A;  2NVY K;  2E2H K;  4A3B K;  1I6V A;  4BBR K;  1SFO C;  3S16 C;  3GTM C;  5M5Y K;  3H0G C;  5IYD K;  4A3G C;  4AYB D;  3M4O K;  5C44 C;  4Y52 K;  4GZY A;  2WAQ D;  1TWA K;  1SFO K;  4A3J K;  3RZD C;  3S14 K;  4A3L K;  1TWH K;  5TMF A;  3I4M C;  4C3J K;  4QIW L;  4A3E C;  2WB1 L;  1Y1W K;  2JA5 K;  4MQ9 A;  4G7O A;  1HQM A;  3GTK K;  3GTO K;  5D4D A;  1WCM C;  3RZO C;  5IP7 K;  4NOI A;  3GTQ C;  1Y1V K;  4A3K C;  5FJ8 K;  3GTL C;  3GTG C;  4A3F K;  4YG2 A;  3HOV C;  4KMU A;  5C4X C;  2E2I K;  4OIN A;  2JA8 C;  3I4M K;  3CQZ K;  5C3E C;  4C2M K;  4A3C C;  3M3Y K;  4BY7 C;  3S2H K;  3PO3 K;  3S1R K;  1K83 K;  4BBS K;  5FLM K;  2NVQ C;  4A3M K;  1I6H K;  3HOW C;  4A3D K;  2A6E A;  3FKI C;  4OIQ A;  3I4N C;  3S1N K;  1I3Q K;  2NVT C;  1TWC C;  5IYC C;  4BY1 C;  4C3I K;  2JA7 K;  2R7Z C;  4A93 K;  2VUM C;  1I50 C;  3S1M C;  4YFX A;  4LK1 A;  2B63 C;  2PMZ D;  3HKZ D;  3S2D C;  2R93 C;  2PA8 L;  3GTJ K;  3GTJ C;  2PPB A;  1I50 K;  3S1M K;  3S2D K;  2VUM K;  4OIP A;  2R7Z K;  2Y0S D;  5IYB K;  2JA7 C;  3PO2 C;  1TWC K;  2NVT K;  3HOZ C;  4C3H K;  3I4N K;  4KN7 A;  5C4J C;  4A3D C;  4XSZ A;  1I6H C;  2NVX K;  1K83 C;  5M5W K;  4QIW D;  3S2H C;  2CW0 A;  3HOU K;  3M3Y C;  3K7A C;  2Y0S L;  1XPP A;  4A3C K;  2PA8 D;  2E2I C;  3GTG K;  4G7Z A;  3K7A K;  4A3K K;  1Y1V C;  3HOU C;  4YFK A;  3GTQ K;  5IP7 C;  2NVX C;  4Q5S A;  1WCM K;  5C4J K;  4AYB L;  4MEY A;  4C3H C;  3HOZ K;  4G7H A;  3PO2 K;  5IYB C;  4C3J C;  1YNJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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