4A3GC

Rna polymerase ii initial transcribing complex with a 2nt dna-rna hybrid
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
total genus 53
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3gC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3gC01
2Y0SL 2WAQL 1I50C 2E2IK 4A3GK 2E2IC 4A3GC 2NVQK 1IW7A 3GTKC 1Y1VK 4A93C 1Y1VC 4C3HC 4ZH4A 3PO2K 4A3DC 4QIWL 4BXXK 3GTOK 2VUMC 3PO3C 4LK0A 5FLMK 4JK1A 5FJ8K 4QJVA 2PMZD 3GTLC 3S14C 3HOYK 3HOYC 2NVYC 3S1NK 1K83K 4XSXA 3S1NC 1K83C 3GTGK 3GTGC 3RZOC 3S15C 3CQZK 3HOXK 5D4DA 3CQZC 2BE5A 4BBRC 3HOXC 3H3VD 3M4OC 3FKIK 3M4OK 3RZDK 3FKIC 3DXJA 1Y1WC 2E2JC 4Y7NC 4OIQA 2PMZL 4C2MK 5M3MK 1TWAK 2JA6K 3I4MK 1TWAC 3I4MC 3S1QK 3GTJK 3HOUK 3S1QC 3GTJC 3HOUC 1TWFC 4X6AK 3GTOC 3H3VL 4A93K 3HOZK 3S2HK 2R93K 3I4NK 3HOZC 2R93C 3WODA 5C4XK 4A3KK 2PPBA 2NVXK 4A3KC 2NVQC 4GZYA 5C44K 1I6VA 4YG2A 5C44C 4LJZA 5IYDK 2A68A 3PO2C 2R7ZK 1WCMK 4BXXC 3S17K 4QJVB 1ZYRA 5TMCA 3HOWK 1BDFA 4MEXA 4XLPA 5FLMC 2A6EA 3HKZD 4OINA 4XSZA 3GTMK 4AYBD 1TWHK 3M3YK 4BY1K 3M3YC 3S1RK 4KN7A 4A3LK 3RZDC 4YFKA 3GTQK 4A3LC 4Q4ZA 2YU9K 4C2MC 3GTKK 2JA6C 2YU9C 3HOVK 4A3BK 4OIPA 3H0GK 4A3CK 2A6HA 4A3IK 3HKZL 4YFXA 3S16K 4BY7K 3S16C 4AYBL 1YNNA 4X6AC 5C3EK 1XPPA 5C3EC 2O5JA 4Y52K 3S2HC 4Y52C 3I4NC 2E2HK 4KMUA 5C4XC 2E2HC 1SFOK 4BBSK 4LLGA 5TMFA 2NVXC 4C3IK 4A3EK 4C3IC 5IYBK 5IYDC 5IYBC 2R7ZC 2NVTK 1WCMC 2NVTC 3S17C 4LK1A 4G7HA 3HOWC 4G7ZA 1I3QK 1TWGK 4A3MK 2WAQD 2PA8D 4A3MC 1SMYA 5M3FK 4MEYA 5IP7K 2CW0A 3GTMC 4XLNA 1TWHC 4BY1C 5M5WK 3S1RC 1I6HK 1I50K 1I6HC 2PA8L 3GTQC 5IP9K 3S1MK 3S1MC 1HQMA 5IYCK 5IP9C 5M5XK 4A3BC 4MQ9A 5IYCC 3HOVC 4BY7C 3H0GC 4A3CC 3K7AK 4A3IC 2A69A 3K7AC 2R92C 4C3HK 2R92K 4A3DK 5M5YK 2JA7K 4YFNA 2JA7C 4A3JK 2WB1D 2VUMK 1R9TK 4A3JC 3PO3K 4BBSC 1R9TC 1SFOC 4OIRA 4A3FK 4A3FC 5C4JK 3GTLK 3S14K 5C4JC 4A3EC 2NVYK 4OIOA 2O5IA 3GTPK 4KN4A 3GTPC 2B63K 3RZOK 2JA5K 3S15K 2B63C 2WB1L 2JA5C 4BBRK 1I3QC 2Y0SD 1TWGC 1Y1WK 2E2JK 4Q5SA 4Y7NK 1YNJA 2JA8K 4NOIA 3S2DK 2JA8C 1TWCK 3S2DC 5IP7C 1TWCC 3EQLA 1TWFK 4G7OA 4QIWD 4C3JK 4C3JC
chains in the Genus database with same CATH superfamily
5IOQA 1PJ7A 2Y0SL 3GIRA 1V5VA 1ZXOA 2E2IC 1TWHA 1IW7A 3L4KA 4A93C 3VA7A 4BXXK 2ZJQS 3H0GA 3PO3C 4LK0A 5FLMK 5FJ8K 2E2HA 1PJ5A 2V6SA 3S1NK 1F9NA 3GTGC 1B4AA 3HOXK 3CQZC 2BE5A 1IS1A 1O24A 2PMZL 2B63A 3I4MC 1I3QA 3GTJK 3HOUK 1EQRA 3GTOC 3S2HK 2R93C 2NVXK 4A3KC 2NVQC 4GZYA 3GEEA 3PO2C 3GTKA 2R92A 4QJVB 3T01A 4DDQA 2JA7A 2VUMA 2A6EA 5HQHA 1RU0A 1XXAA 2KPUA 2NVYA 3M3YC 4KN7A 1FEUA 3GTQK 4Q4ZA 2KWAA 3S16K 2XCOA 2GSUA 1EI6A 4AYBL 3GDZA 1TWAA 2O5JA 4XCHA 4Y52C 1BJTA 1JOEA 2RH6A 1DD5A 4C3IC 2L5NA 2E2IA 2NVTK 3NUHA 1WCMC 3IPJA 4KB4A 3HOWC 1IE0A 2WAQD 4A3MC 2V6UA 5M3FK 4MEYA 2CW0A 4GT9A 4KATA 1TWHC 2GAHC 2FQTA 5M5WK 3GTGA 1I6HC 5EGEA 3S1MC 3CQZA 5IP9C 4BY7C 3H0GC 4A93K 3K7AC 5M5YK 2JA6A 1ZBSA 1VLOA 1BGWA 1R9TK 3PO3K 3AD8C 1VJEA 3A8KA 2ZJPS 4GTFA 4KB2A 2R93A 5C4JC 4A3EC 3SZYA 1J6WA 2KQ1A 1WQFA 4KN4A 3GTPC 1WOOA 4WF9S 3QX3A 2B63C 2WB1L 2R7ZA 4KM8A 1I3QC 3FOEA 2ZUEA 1O28A 1WOSA 3HXAA 3S2DC 5IP7C 1ISEA 1WORA 4G7OA 3GTOK 3AD7C 2CFAA 1XXCA 4A3GK 2NVQK 3GTKC 1Y1VK 4ZH4A 3PO2K 4A3DC 3FOFA 4GFQA 2VUMC 3GEHA 3T02A 3HOYC 2NVYC 1EK8A 3DLLS 1VRQC 3GSIA 5TJ3A 4BLBA 1SFOA 1K83C 1VGXA 1O2BA 3H3VD 3FKIK 2L3UA 3M4OC 1O27A 1YX2A 2E2JC 5JFEA 4KMAA 1TWAC 4KM9A 1WOPA 2GSOA 1O29A 3S1QC 1O2AA 3N0BA 4U67S 1AB4A 3HOZK 3WODA 1TWCA 2PPBA 1XZQA 5C44C 1I50A 2A68A 2XCQA 1WCMK 3ADAC 1G51A 3HOWK 1F93A 3L4JA 4G0VA 4LR2A 3HKZD 4OINA 4M1XA 5JVHS 1TWHK 3SZZA 3GTPA 1O2FB 4AH6A 3RZDC 4A3LC 3PIPS 2YU9C 2JA6C 4BY7K 3H0GK 1Y1WA 4YFXA 1J6XA 5DM6S 3AH5A 3OREA 4X6AC 5C3EC 3I4NC 2E2HK 4KMUA 5C4XC 1TWFA 4LLGA 1KQ4A 5HL7S 4GTDA 3N0CA 1VH2A 1WIHA 4A3EK 4J3NA 3CF5S 5IYBK 5DM7S 2R7ZC 3S17C 4G7HA 4KDDA 5HL8A 1I3QK 4KAWX 1SMYA 4P5AA 4LQYA 4C45A 2D6FC 1INNA 5IP7K 1K83A 5IYCK 5M5XK 2V6TA 3GTKK 4MQ9A 4A3CC 2R92K 4KASA 2P8TA 4A3DK 4IO9S 2JA7K 3OPFA 2VUMK 4IOCS 4A3JC 3FHZA 1SFOC 4A3FK 1XZPA 2NVYK 4KC6A 2JA5C 2E2JK 3TFHA 2GAGC 2JA8K 1TWCC 4QIWD 4C3JC 1J98A 1I50C 2E2IK 3GTMA 4IOAS 5IORA 4BKWA 2YU9A 1X31C 3MMLB 3S14C 4GTBA 4PAAA 1BS2A 4XSXA 3S1NC 3AQPA 3GTGK 3CQZK 5D4DA 4BBRC 3HOXC 1GE9A 3RZDK 1Y1WC 4OIQA 1DCPA 5M3MK 2JA6K 3I4MK 1F7VA 1TWGA 2CFAB 3GTJC 3HOUC 1EH1A 1TWFC 4X6AK 2ZFZA 3H3VL 2R93K 3I4NK 1DCOA 4KARA 5C4XK 4A3KK 3LYWA 1I6VA 4YG2A 4FZBA 5L46A 3JSTA 2R7ZK 3T00A 5JVOA 3PIOS 3TTGA 3S17K 3LAJA 4MEXA 4XLPA 4BLAA 3BP3A 1USOA 2FQOA 3AD9C 3GTLA 2KXYA 1O26A 3M3YK 4P5BA 1XXBA 3BP8C 1USMA 5EGHA 2JA5A 4C2MC 1IL2A 4A3CK 3HKZL 3S16C 1L0WA 1XZQB 4Y52K 1O25A 3G4CA 1SFOK 5TMFA 4C3IK 3TFJA 5IYDC 2NVTC 4GTEA 4LK1A 5CJ9A 3Q3QA 4A3MK 2PA8D 5JVGS 1IQ0A 1DCHA 1IBAA 3GTMC 4XLNA 4BY1C 3S1RC 1I6HK 1I50K 1ZQ1C 2P5MA 3S1MK 5IP9K 3AQOA 4A3BC 3HOVC 5CHPA 3K7AK 4A3IC 4WJ3M 4YFNA 3A8IA 3GTJA 2PHCB 4BBSC 1R9TC 4OIRA 2ZUFA 3G4AA 1EFWA 4WFAS 5C4JK 3S14K 3GTPK 2O5IA 3GEIA 2NVXA 1WSRA 2B63K 4O2DA 2ZJRS 4GTAA 4BBRK 2Y0SD 1TWGC 1Y1WK 4Q5SA 3OEPA 1C0AA 4ILDA 3S2DK 3EQLA 1TWFK 3TFIA 2WAQL 4A3GC 1J6VA 1Y1VC 4C3HC 4GTLA 3GTQA 4QIWL 1XZPB 4JK1A 4QJVA 2PMZD 3GTLC 5E68A 3HOYK 1K83K 3V4GA 4GTCA 3RZOC 3S15C 3M4OK 3FKIC 3DXJA 4RMFA 4Y7NC 2RGRA 5IOTA 4C2MK 1TWAK 3A8JA 3S1QK 3LPXA 1B4BA 1PJ6A 3HOZC 3ERED 5C44K 3N3YA 4LJZA 5IYDK 4BXXC 3LAPA 2EBBA 1ZYRA 5TMCA 1JQWA 1BDFA 4FM9A 5FLMC 3BUEA 4KMHA 4WFNS 1JVIA 4KMDA 1R9TA 4XSZA 3GTMK 4AYBD 4BY1K 3S1RK 1WSVA 4LOWA 1UV7A 4A3LK 4WJ4A 4YFKA 2YU9K 4P9SA 4A3BK 3HOVK 4OIPA 1F7UA 2A6HA 4A3IK 4G0WA 1YNNA 5C3EK 1XPPA 4WCES 3S2HC 4G0UA 4BBSK 2E2HC 2NVXC 3GTOA 2JH3A 5IYBC 1Y1VA 2XCRB 4G7ZA 1HI9A 1WQHA 1TWGK 5IOSA 4PABA 2W7VA 2Y3PA 2PA8L 3GTQC 1HQMA 1ZVUA 5IYCC 4WILA 3FKIA 2A69A 2R92C 4C3HK 3CAGA 2JA7C 4A3JK 2WB1D 2GSNA 4A3FC 3GTLK 1WQGA 4WFBS 3RZOK 2JA5K 3S15K 1YCLA 3S0XA 1WCMA 4Y7NK 1YNJA 4NOIA 2JA8C 1TWCK 4C3JK 4OIOA
chains in the Genus database with same CATH topology
2Y0SL 2WAQL 1I50C 2E2IK 4A3GK 2E2IC 4A3GC 2NVQK 1IW7A 3GTKC 1Y1VK 4A93C 1Y1VC 4C3HC 4ZH4A 3PO2K 4A3DC 4QIWL 4BXXK 3GTOK 2VUMC 3PO3C 4LK0A 5FLMK 4JK1A 5FJ8K 4QJVA 2PMZD 3GTLC 3S14C 3HOYK 3HOYC 2NVYC 3S1NK 1K83K 4XSXA 3S1NC 1K83C 3GTGK 3GTGC 3RZOC 3S15C 3CQZK 3HOXK 5D4DA 3CQZC 2BE5A 4BBRC 3HOXC 3H3VD 3M4OC 3FKIK 3M4OK 3RZDK 3FKIC 3DXJA 1Y1WC 2E2JC 4Y7NC 4OIQA 2PMZL 4C2MK 5M3MK 1TWAK 2JA6K 3I4MK 1TWAC 3I4MC 3S1QK 3GTJK 3HOUK 3S1QC 3GTJC 3HOUC 1TWFC 4X6AK 3GTOC 3H3VL 4A93K 3HOZK 3S2HK 2R93K 3I4NK 3HOZC 2R93C 3WODA 5C4XK 4A3KK 2PPBA 2NVXK 4A3KC 2NVQC 4GZYA 5C44K 1I6VA 4YG2A 5C44C 4LJZA 5IYDK 2A68A 3PO2C 2R7ZK 1WCMK 4BXXC 3S17K 4QJVB 1ZYRA 5TMCA 3HOWK 1BDFA 4MEXA 4XLPA 5FLMC 2A6EA 3HKZD 4OINA 4XSZA 3GTMK 4AYBD 1TWHK 3M3YK 4BY1K 3M3YC 3S1RK 4KN7A 4A3LK 3RZDC 4YFKA 3GTQK 4A3LC 4Q4ZA 2YU9K 4C2MC 3GTKK 2JA6C 2YU9C 3HOVK 4A3BK 4OIPA 3H0GK 4A3CK 2A6HA 4A3IK 3HKZL 4YFXA 3S16K 4BY7K 3S16C 4AYBL 1YNNA 4X6AC 5C3EK 1XPPA 5C3EC 2O5JA 4Y52K 3S2HC 4Y52C 3I4NC 2E2HK 4KMUA 5C4XC 2E2HC 1SFOK 4BBSK 4LLGA 5TMFA 2NVXC 4C3IK 4A3EK 4C3IC 5IYBK 5IYDC 5IYBC 2R7ZC 2NVTK 1WCMC 2NVTC 3S17C 4LK1A 4G7HA 3HOWC 4G7ZA 1I3QK 1TWGK 4A3MK 2WAQD 2PA8D 4A3MC 1SMYA 5M3FK 4MEYA 5IP7K 2CW0A 3GTMC 4XLNA 1TWHC 4BY1C 5M5WK 3S1RC 1I6HK 1I50K 1I6HC 2PA8L 3GTQC 5IP9K 3S1MK 3S1MC 1HQMA 5IYCK 5IP9C 5M5XK 4A3BC 4MQ9A 5IYCC 3HOVC 4BY7C 3H0GC 4A3CC 3K7AK 4A3IC 2A69A 3K7AC 2R92C 4C3HK 2R92K 4A3DK 5M5YK 2JA7K 4YFNA 2JA7C 4A3JK 2WB1D 2VUMK 1R9TK 4A3JC 3PO3K 4BBSC 1R9TC 1SFOC 4OIRA 4A3FK 4A3FC 5C4JK 3GTLK 3S14K 5C4JC 4A3EC 2NVYK 4OIOA 2O5IA 3GTPK 4KN4A 3GTPC 2B63K 3RZOK 2JA5K 3S15K 2B63C 2WB1L 2JA5C 4BBRK 1I3QC 2Y0SD 1TWGC 1Y1WK 2E2JK 4Q5SA 4Y7NK 1YNJA 2JA8K 4NOIA 3S2DK 2JA8C 1TWCK 3S2DC 5IP7C 1TWCC 3EQLA 1TWFK 4G7OA 4QIWD 4C3JK 4C3JC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y0S L;  2WAQ L;  1I50 C;  2E2I K;  4A3G K;  2E2I C;  4A3G C;  2NVQ K;  1IW7 A;  3GTK C;  1Y1V K;  4A93 C;  1Y1V C;  4C3H C;  4ZH4 A;  3PO2 K;  4A3D C;  4QIW L;  4BXX K;  3GTO K;  2VUM C;  3PO3 C;  4LK0 A;  5FLM K;  4JK1 A;  5FJ8 K;  4QJV A;  2PMZ D;  3GTL C;  3S14 C;  3HOY K;  3HOY C;  2NVY C;  3S1N K;  1K83 K;  4XSX A;  3S1N C;  1K83 C;  3GTG K;  3GTG C;  3RZO C;  3S15 C;  3CQZ K;  3HOX K;  5D4D A;  3CQZ C;  2BE5 A;  4BBR C;  3HOX C;  3H3V D;  3M4O C;  3FKI K;  3M4O K;  3RZD K;  3FKI C;  3DXJ A;  1Y1W C;  2E2J C;  4Y7N C;  4OIQ A;  2PMZ L;  4C2M K;  5M3M K;  1TWA K;  2JA6 K;  3I4M K;  1TWA C;  3I4M C;  3S1Q K;  3GTJ K;  3HOU K;  3S1Q C;  3GTJ C;  3HOU C;  1TWF C;  4X6A K;  3GTO C;  3H3V L;  4A93 K;  3HOZ K;  3S2H K;  2R93 K;  3I4N K;  3HOZ C;  2R93 C;  3WOD A;  5C4X K;  4A3K K;  2PPB A;  2NVX K;  4A3K C;  2NVQ C;  4GZY A;  5C44 K;  1I6V A;  4YG2 A;  5C44 C;  4LJZ A;  5IYD K;  2A68 A;  3PO2 C;  2R7Z K;  1WCM K;  4BXX C;  3S17 K;  4QJV B;  1ZYR A;  5TMC A;  3HOW K;  1BDF A;  4MEX A;  4XLP A;  5FLM C;  2A6E A;  3HKZ D;  4OIN A;  4XSZ A;  3GTM K;  4AYB D;  1TWH K;  3M3Y K;  4BY1 K;  3M3Y C;  3S1R K;  4KN7 A;  4A3L K;  3RZD C;  4YFK A;  3GTQ K;  4A3L C;  4Q4Z A;  2YU9 K;  4C2M C;  3GTK K;  2JA6 C;  2YU9 C;  3HOV K;  4A3B K;  4OIP A;  3H0G K;  4A3C K;  2A6H A;  4A3I K;  3HKZ L;  4YFX A;  3S16 K;  4BY7 K;  3S16 C;  4AYB L;  1YNN A;  4X6A C;  5C3E K;  1XPP A;  5C3E C;  2O5J A;  4Y52 K;  3S2H C;  4Y52 C;  3I4N C;  2E2H K;  4KMU A;  5C4X C;  2E2H C;  1SFO K;  4BBS K;  4LLG A;  5TMF A;  2NVX C;  4C3I K;  4A3E K;  4C3I C;  5IYB K;  5IYD C;  5IYB C;  2R7Z C;  2NVT K;  1WCM C;  2NVT C;  3S17 C;  4LK1 A;  4G7H A;  3HOW C;  4G7Z A;  1I3Q K;  1TWG K;  4A3M K;  2WAQ D;  2PA8 D;  4A3M C;  1SMY A;  5M3F K;  4MEY A;  5IP7 K;  2CW0 A;  3GTM C;  4XLN A;  1TWH C;  4BY1 C;  5M5W K;  3S1R C;  1I6H K;  1I50 K;  1I6H C;  2PA8 L;  3GTQ C;  5IP9 K;  3S1M K;  3S1M C;  1HQM A;  5IYC K;  5IP9 C;  5M5X K;  4A3B C;  4MQ9 A;  5IYC C;  3HOV C;  4BY7 C;  3H0G C;  4A3C C;  3K7A K;  4A3I C;  2A69 A;  3K7A C;  2R92 C;  4C3H K;  2R92 K;  4A3D K;  5M5Y K;  2JA7 K;  4YFN A;  2JA7 C;  4A3J K;  2WB1 D;  2VUM K;  1R9T K;  4A3J C;  3PO3 K;  4BBS C;  1R9T C;  1SFO C;  4OIR A;  4A3F K;  4A3F C;  5C4J K;  3GTL K;  3S14 K;  5C4J C;  4A3E C;  2NVY K;  4OIO A;  2O5I A;  3GTP K;  4KN4 A;  3GTP C;  2B63 K;  3RZO K;  2JA5 K;  3S15 K;  2B63 C;  2WB1 L;  2JA5 C;  4BBR K;  1I3Q C;  2Y0S D;  1TWG C;  1Y1W K;  2E2J K;  4Q5S A;  4Y7N K;  1YNJ A;  2JA8 K;  4NOI A;  3S2D K;  2JA8 C;  1TWC K;  3S2D C;  5IP7 C;  1TWC C;  3EQL A;  1TWF K;  4G7O A;  4QIW D;  4C3J K;  4C3J C; 
#chains in the Genus database with same CATH topology
 5IOQ A;  1PJ7 A;  2Y0S L;  3GIR A;  1V5V A;  1ZXO A;  2E2I C;  1TWH A;  1IW7 A;  3L4K A;  4A93 C;  3VA7 A;  4BXX K;  2ZJQ S;  3H0G A;  3PO3 C;  4LK0 A;  5FLM K;  5FJ8 K;  2E2H A;  1PJ5 A;  2V6S A;  3S1N K;  1F9N A;  3GTG C;  1B4A A;  3HOX K;  3CQZ C;  2BE5 A;  1IS1 A;  1O24 A;  2PMZ L;  2B63 A;  3I4M C;  1I3Q A;  3GTJ K;  3HOU K;  1EQR A;  3GTO C;  3S2H K;  2R93 C;  2NVX K;  4A3K C;  2NVQ C;  4GZY A;  3GEE A;  3PO2 C;  3GTK A;  2R92 A;  4QJV B;  3T01 A;  4DDQ A;  2JA7 A;  2VUM A;  2A6E A;  5HQH A;  1RU0 A;  1XXA A;  2KPU A;  2NVY A;  3M3Y C;  4KN7 A;  1FEU A;  3GTQ K;  4Q4Z A;  2KWA A;  3S16 K;  2XCO A;  2GSU A;  1EI6 A;  4AYB L;  3GDZ A;  1TWA A;  2O5J A;  4XCH A;  4Y52 C;  1BJT A;  1JOE A;  2RH6 A;  1DD5 A;  4C3I C;  2L5N A;  2E2I A;  2NVT K;  3NUH A;  1WCM C;  3IPJ A;  4KB4 A;  3HOW C;  1IE0 A;  2WAQ D;  4A3M C;  2V6U A;  5M3F K;  4MEY A;  2CW0 A;  4GT9 A;  4KAT A;  1TWH C;  2GAH C;  2FQT A;  5M5W K;  3GTG A;  1I6H C;  5EGE A;  3S1M C;  3CQZ A;  5IP9 C;  4BY7 C;  3H0G C;  4A93 K;  3K7A C;  5M5Y K;  2JA6 A;  1ZBS A;  1VLO A;  1BGW A;  1R9T K;  3PO3 K;  3AD8 C;  1VJE A;  3A8K A;  2ZJP S;  4GTF A;  4KB2 A;  2R93 A;  5C4J C;  4A3E C;  3SZY A;  1J6W A;  2KQ1 A;  1WQF A;  4KN4 A;  3GTP C;  1WOO A;  4WF9 S;  3QX3 A;  2B63 C;  2WB1 L;  2R7Z A;  4KM8 A;  1I3Q C;  3FOE A;  2ZUE A;  1O28 A;  1WOS A;  3HXA A;  3S2D C;  5IP7 C;  1ISE A;  1WOR A;  4G7O A;  3GTO K;  3AD7 C;  2CFA A;  1XXC A;  4A3G K;  2NVQ K;  3GTK C;  1Y1V K;  4ZH4 A;  3PO2 K;  4A3D C;  3FOF A;  4GFQ A;  2VUM C;  3GEH A;  3T02 A;  3HOY C;  2NVY C;  1EK8 A;  3DLL S;  1VRQ C;  3GSI A;  5TJ3 A;  4BLB A;  1SFO A;  1K83 C;  1VGX A;  1O2B A;  3H3V D;  3FKI K;  2L3U A;  3M4O C;  1O27 A;  1YX2 A;  2E2J C;  5JFE A;  4KMA A;  1TWA C;  4KM9 A;  1WOP A;  2GSO A;  1O29 A;  3S1Q C;  1O2A A;  3N0B A;  4U67 S;  1AB4 A;  3HOZ K;  3WOD A;  1TWC A;  2PPB A;  1XZQ A;  5C44 C;  1I50 A;  2A68 A;  2XCQ A;  1WCM K;  3ADA C;  1G51 A;  3HOW K;  1F93 A;  3L4J A;  4G0V A;  4LR2 A;  3HKZ D;  4OIN A;  4M1X A;  5JVH S;  1TWH K;  3SZZ A;  3GTP A;  1O2F B;  4AH6 A;  3RZD C;  4A3L C;  3PIP S;  2YU9 C;  2JA6 C;  4BY7 K;  3H0G K;  1Y1W A;  4YFX A;  1J6X A;  5DM6 S;  3AH5 A;  3ORE A;  4X6A C;  5C3E C;  3I4N C;  2E2H K;  4KMU A;  5C4X C;  1TWF A;  4LLG A;  1KQ4 A;  5HL7 S;  4GTD A;  3N0C A;  1VH2 A;  1WIH A;  4A3E K;  4J3N A;  3CF5 S;  5IYB K;  5DM7 S;  2R7Z C;  3S17 C;  4G7H A;  4KDD A;  5HL8 A;  1I3Q K;  4KAW X;  1SMY A;  4P5A A;  4LQY A;  4C45 A;  2D6F C;  1INN A;  5IP7 K;  1K83 A;  5IYC K;  5M5X K;  2V6T A;  3GTK K;  4MQ9 A;  4A3C C;  2R92 K;  4KAS A;  2P8T A;  4A3D K;  4IO9 S;  2JA7 K;  3OPF A;  2VUM K;  4IOC S;  4A3J C;  3FHZ A;  1SFO C;  4A3F K;  1XZP A;  2NVY K;  4KC6 A;  2JA5 C;  2E2J K;  3TFH A;  2GAG C;  2JA8 K;  1TWC C;  4QIW D;  4C3J C;  1J98 A;  1I50 C;  2E2I K;  3GTM A;  4IOA S;  5IOR A;  4BKW A;  2YU9 A;  1X31 C;  3MML B;  3S14 C;  4GTB A;  4PAA A;  1BS2 A;  4XSX A;  3S1N C;  3AQP A;  3GTG K;  3CQZ K;  5D4D A;  4BBR C;  3HOX C;  1GE9 A;  3RZD K;  1Y1W C;  4OIQ A;  1DCP A;  5M3M K;  2JA6 K;  3I4M K;  1F7V A;  1TWG A;  2CFA B;  3GTJ C;  3HOU C;  1EH1 A;  1TWF C;  4X6A K;  2ZFZ A;  3H3V L;  2R93 K;  3I4N K;  1DCO A;  4KAR A;  5C4X K;  4A3K K;  3LYW A;  1I6V A;  4YG2 A;  4FZB A;  5L46 A;  3JST A;  2R7Z K;  3T00 A;  5JVO A;  3PIO S;  3TTG A;  3S17 K;  3LAJ A;  4MEX A;  4XLP A;  4BLA A;  3BP3 A;  1USO A;  2FQO A;  3AD9 C;  3GTL A;  2KXY A;  1O26 A;  3M3Y K;  4P5B A;  1XXB A;  3BP8 C;  1USM A;  5EGH A;  2JA5 A;  4C2M C;  1IL2 A;  4A3C K;  3HKZ L;  3S16 C;  1L0W A;  1XZQ B;  4Y52 K;  1O25 A;  3G4C A;  1SFO K;  5TMF A;  4C3I K;  3TFJ A;  5IYD C;  2NVT C;  4GTE A;  4LK1 A;  5CJ9 A;  3Q3Q A;  4A3M K;  2PA8 D;  5JVG S;  1IQ0 A;  1DCH A;  1IBA A;  3GTM C;  4XLN A;  4BY1 C;  3S1R C;  1I6H K;  1I50 K;  1ZQ1 C;  2P5M A;  3S1M K;  5IP9 K;  3AQO A;  4A3B C;  3HOV C;  5CHP A;  3K7A K;  4A3I C;  4WJ3 M;  4YFN A;  3A8I A;  3GTJ A;  2PHC B;  4BBS C;  1R9T C;  4OIR A;  2ZUF A;  3G4A A;  1EFW A;  4WFA S;  5C4J K;  3S14 K;  3GTP K;  2O5I A;  3GEI A;  2NVX A;  1WSR A;  2B63 K;  4O2D A;  2ZJR S;  4GTA A;  4BBR K;  2Y0S D;  1TWG C;  1Y1W K;  4Q5S A;  3OEP A;  1C0A A;  4ILD A;  3S2D K;  3EQL A;  1TWF K;  3TFI A;  2WAQ L;  4A3G C;  1J6V A;  1Y1V C;  4C3H C;  4GTL A;  3GTQ A;  4QIW L;  1XZP B;  4JK1 A;  4QJV A;  2PMZ D;  3GTL C;  5E68 A;  3HOY K;  1K83 K;  3V4G A;  4GTC A;  3RZO C;  3S15 C;  3M4O K;  3FKI C;  3DXJ A;  4RMF A;  4Y7N C;  2RGR A;  5IOT A;  4C2M K;  1TWA K;  3A8J A;  3S1Q K;  3LPX A;  1B4B A;  1PJ6 A;  3HOZ C;  3ERE D;  5C44 K;  3N3Y A;  4LJZ A;  5IYD K;  4BXX C;  3LAP A;  2EBB A;  1ZYR A;  5TMC A;  1JQW A;  1BDF A;  4FM9 A;  5FLM C;  3BUE A;  4KMH A;  4WFN S;  1JVI A;  4KMD A;  1R9T A;  4XSZ A;  3GTM K;  4AYB D;  4BY1 K;  3S1R K;  1WSV A;  4LOW A;  1UV7 A;  4A3L K;  4WJ4 A;  4YFK A;  2YU9 K;  4P9S A;  4A3B K;  3HOV K;  4OIP A;  1F7U A;  2A6H A;  4A3I K;  4G0W A;  1YNN A;  5C3E K;  1XPP A;  4WCE S;  3S2H C;  4G0U A;  4BBS K;  2E2H C;  2NVX C;  3GTO A;  2JH3 A;  5IYB C;  1Y1V A;  2XCR B;  4G7Z A;  1HI9 A;  1WQH A;  1TWG K;  5IOS A;  4PAB A;  2W7V A;  2Y3P A;  2PA8 L;  3GTQ C;  1HQM A;  1ZVU A;  5IYC C;  4WIL A;  3FKI A;  2A69 A;  2R92 C;  4C3H K;  3CAG A;  2JA7 C;  4A3J K;  2WB1 D;  2GSN A;  4A3F C;  3GTL K;  1WQG A;  4WFB S;  3RZO K;  2JA5 K;  3S15 K;  1YCL A;  3S0X A;  1WCM A;  4Y7N K;  1YNJ A;  4NOI A;  2JA8 C;  1TWC K;  4C3J K;  4OIO A; 
#chains in the Genus database with same CATH homology
 2Y0S L;  2WAQ L;  1I50 C;  2E2I K;  4A3G K;  2E2I C;  4A3G C;  2NVQ K;  1IW7 A;  3GTK C;  1Y1V K;  4A93 C;  1Y1V C;  4C3H C;  4ZH4 A;  3PO2 K;  4A3D C;  4QIW L;  4BXX K;  3GTO K;  2VUM C;  3PO3 C;  4LK0 A;  5FLM K;  4JK1 A;  5FJ8 K;  4QJV A;  2PMZ D;  3GTL C;  3S14 C;  3HOY K;  3HOY C;  2NVY C;  3S1N K;  1K83 K;  4XSX A;  3S1N C;  1K83 C;  3GTG K;  3GTG C;  3RZO C;  3S15 C;  3CQZ K;  3HOX K;  5D4D A;  3CQZ C;  2BE5 A;  4BBR C;  3HOX C;  3H3V D;  3M4O C;  3FKI K;  3M4O K;  3RZD K;  3FKI C;  3DXJ A;  1Y1W C;  2E2J C;  4Y7N C;  4OIQ A;  2PMZ L;  4C2M K;  5M3M K;  1TWA K;  2JA6 K;  3I4M K;  1TWA C;  3I4M C;  3S1Q K;  3GTJ K;  3HOU K;  3S1Q C;  3GTJ C;  3HOU C;  1TWF C;  4X6A K;  3GTO C;  3H3V L;  4A93 K;  3HOZ K;  3S2H K;  2R93 K;  3I4N K;  3HOZ C;  2R93 C;  3WOD A;  5C4X K;  4A3K K;  2PPB A;  2NVX K;  4A3K C;  2NVQ C;  4GZY A;  5C44 K;  1I6V A;  4YG2 A;  5C44 C;  4LJZ A;  5IYD K;  2A68 A;  3PO2 C;  2R7Z K;  1WCM K;  4BXX C;  3S17 K;  4QJV B;  1ZYR A;  5TMC A;  3HOW K;  1BDF A;  4MEX A;  4XLP A;  5FLM C;  2A6E A;  3HKZ D;  4OIN A;  4XSZ A;  3GTM K;  4AYB D;  1TWH K;  3M3Y K;  4BY1 K;  3M3Y C;  3S1R K;  4KN7 A;  4A3L K;  3RZD C;  4YFK A;  3GTQ K;  4A3L C;  4Q4Z A;  2YU9 K;  4C2M C;  3GTK K;  2JA6 C;  2YU9 C;  3HOV K;  4A3B K;  4OIP A;  3H0G K;  4A3C K;  2A6H A;  4A3I K;  3HKZ L;  4YFX A;  3S16 K;  4BY7 K;  3S16 C;  4AYB L;  1YNN A;  4X6A C;  5C3E K;  1XPP A;  5C3E C;  2O5J A;  4Y52 K;  3S2H C;  4Y52 C;  3I4N C;  2E2H K;  4KMU A;  5C4X C;  2E2H C;  1SFO K;  4BBS K;  4LLG A;  5TMF A;  2NVX C;  4C3I K;  4A3E K;  4C3I C;  5IYB K;  5IYD C;  5IYB C;  2R7Z C;  2NVT K;  1WCM C;  2NVT C;  3S17 C;  4LK1 A;  4G7H A;  3HOW C;  4G7Z A;  1I3Q K;  1TWG K;  4A3M K;  2WAQ D;  2PA8 D;  4A3M C;  1SMY A;  5M3F K;  4MEY A;  5IP7 K;  2CW0 A;  3GTM C;  4XLN A;  1TWH C;  4BY1 C;  5M5W K;  3S1R C;  1I6H K;  1I50 K;  1I6H C;  2PA8 L;  3GTQ C;  5IP9 K;  3S1M K;  3S1M C;  1HQM A;  5IYC K;  5IP9 C;  5M5X K;  4A3B C;  4MQ9 A;  5IYC C;  3HOV C;  4BY7 C;  3H0G C;  4A3C C;  3K7A K;  4A3I C;  2A69 A;  3K7A C;  2R92 C;  4C3H K;  2R92 K;  4A3D K;  5M5Y K;  2JA7 K;  4YFN A;  2JA7 C;  4A3J K;  2WB1 D;  2VUM K;  1R9T K;  4A3J C;  3PO3 K;  4BBS C;  1R9T C;  1SFO C;  4OIR A;  4A3F K;  4A3F C;  5C4J K;  3GTL K;  3S14 K;  5C4J C;  4A3E C;  2NVY K;  4OIO A;  2O5I A;  3GTP K;  4KN4 A;  3GTP C;  2B63 K;  3RZO K;  2JA5 K;  3S15 K;  2B63 C;  2WB1 L;  2JA5 C;  4BBR K;  1I3Q C;  2Y0S D;  1TWG C;  1Y1W K;  2E2J K;  4Q5S A;  4Y7N K;  1YNJ A;  2JA8 K;  4NOI A;  3S2D K;  2JA8 C;  1TWC K;  3S2D C;  5IP7 C;  1TWC C;  3EQL A;  1TWF K;  4G7O A;  4QIW D;  4C3J K;  4C3J C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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