4A3DC

Rna polymerase ii initial transcribing complex with a 6nt dna-rna hybrid
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 61
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3dC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3dC01
4A3IC 2R93K 2NVTC 4GZYA 4LK0A 5FJ8K 2A68A 3H3VL 5IYDC 2WB1D 4OIPA 5C44C 3HKZD 1TWAK 5C4JK 4A3FK 3GTOK 3RZOK 3S17K 1I50K 3FKIK 3HOVC 2NVQK 4A3LK 5M5XK 1XPPA 4C3HC 5C3EC 3HOYC 1I3QK 2JA6K 3S1QC 2PA8D 4A3DC 4MEXA 2E2JK 3PO2K 1WCMC 1TWAC 3GTOC 5TMFA 5C4JC 1Y1VC 3GTLC 3RZOC 3GTKC 4A3LC 2WB1L 3FKIC 3HKZL 2NVQC 2E2HK 3S16K 1TWGC 2VUMC 4BY7K 4A3MK 4NOIA 2JA6C 3GTQK 2WAQD 3RZDC 2PA8L 4XSZA 2E2JC 3PO2C 4A93C 4C3IK 4BY1C 4Q5SA 4KN7A 4Y7NK 3GTJC 4A3EK 4A3CK 3S2DC 1HQMA 2E2HC 3K7AC 4XLPA 3GTPC 3S16C 4A3MC 3S15C 3I4NC 4BY7C 3I4MK 3M4OK 5IYCC 4A3GC 3CQZK 2WAQL 3M3YK 1R9TK 3S1NC 2YU9K 3HOXK 3HOUK 2E2IC 1TWCC 4Y7NC 4C3IC 4YFXA 4A3EC 2NVYC 4OIQA 5TMCA 4A3CC 5IYBK 3PO3C 2A6EA 3S14C 2R92K 3HOWC 5M5YK 4ZH4A 2R93C 2B63K 2JA7K 3I4MC 2PPBA 5IP9K 3CQZC 4A3FC 4LLGA 3M3YC 4LK1A 1R9TC 3S17C 3S2HK 1I50C 4MEYA 2PMZL 3HOUC 1I3QC 4JK1A 1TWFK 4C3JK 2R92C 5IP7K 2A6HA 4LJZA 4OIRA 4Y52K 1I6VA 2B63C 2JA7C 1BDFA 4A3KK 4C2MK 2NVXK 4XSXA 5IP9C 2R7ZK 4G7OA 4OIOA 1TWHK 3H0GK 4BXXK 4KMUA 4A3BK 3GTQC 4C3JC 4G7ZA 5IP7C 1YNNA 5M3MK 2JA8K 2PMZD 4Y52C 3S1MK 5C4XK 4A3KC 2Y0SD 4X6AK 2R7ZC 1SFOK 4A3JK 1Y1WK 4YFKA 4BXXC 4A3BC 4QIWL 3M4OC 5M5WK 4A3IK 2NVTK 3HOZK 2CW0A 5IYDK 5C44K 3S1MC 1I6HK 5C4XC 4OINA 2YU9C 3HOXC 1K83K 4XLNA 3HOVK 2O5JA 2Y0SL 4G7HA 2O5IA 5IYBC 5FLMK 1Y1WC 4A3DK 3GTMK 2JA5K 4MQ9A 3DXJA 4YG2A 3HOZC 3EQLA 1WCMK 3S2HC 4YFNA 1I6HC 3GTLK 1Y1VK 3GTGK 3GTKK 1K83C 4QIWD 1ZYRA 4AYBL 1TWGK 2VUMK 1TWFC 4KN4A 5FLMC 3RZDK 3S1RK 4BBSK 4QJVA 3GTMC 4C2MC 2NVXC 2JA5C 4A93K 3GTGC 4BY1K 2A69A 3WODA 3GTJK 3S2DK 1TWHC 3H0GC 4BBRK 3H3VD 3K7AK 3GTPK 3I4NK 3S15K 2BE5A 5IYCK 2JA8C 4A3GK 3S1RC 4BBSC 1YNJA 4AYBD 4X6AC 3S1NK 1IW7A 2E2IK 1TWCK 2NVYK 4Q4ZA 1SFOC 4C3HK 4A3JC 5C3EK 3HOYK 4QJVB 3S14K 4BBRC 3PO3K 3S1QK 3HOWK 5M3FK 5D4DA 1SMYA
chains in the Genus database with same CATH superfamily
4A3IC 2NVTC 4LK0A 2WB1D 5C44C 3RZOK 2KPUA 3FKIK 5M5XK 4C3HC 1F9NA 3TFJA 5DM7S 1XXAA 4A3DC 3BP8C 1HI9A 1JQWA 3PO2K 3GTOC 1TWAC 3GTLC 5TMFA 2ZJRS 1Y1VC 1EI6A 1TWFA 2E2HK 2JA6C 4KMDA 1BS2A 5JVHS 4BY1C 4Q5SA 3GTJC 4GTFA 3S2DC 1HQMA 1WQGA 1XZPA 1EFWA 3I4NC 4BY7C 5IYCC 4WF9S 4ILDA 1J98A 3S1NC 4G0UA 2CFAB 1TWCC 3PO3C 3HOWC 3G4CA 3I4MC 1K83A 3CQZC 3M3YC 1I50C 3L4JA 1VH2A 1TWFK 5TJ3A 2A6HA 4Y52K 1BDFA 3G4AA 5IP9C 2P8TA 1ZVUA 4G7OA 1TWGA 3TFHA 1J6XA 3QX3A 4KMUA 4WFAS 5M3MK 4G7ZA 4KB4A 3S1MK 2P5MA 5EGEA 2R7ZC 4KDDA 4A3BC 5M5WK 2E2IA 1XZPB 3CAGA 1K83K 3HOVK 4G7HA 2R93A 2L3UA 5FLMK 4WILA 1WQHA 1WSVA 3GTGK 1I3QA 2R92A 4AYBL 1TWGK 4C2MC 2JA5C 4GTDA 4IOCS 4P9SA 1YCLA 1L0WA 1WOOA 2A69A 1O25A 5JFEA 4BLBA 3GTQA 1JOEA 3H3VD 3T00A 2KWAA 1PJ7A 4A3GK 2ZUFA 3S1RC 1O27A 4AYBD 1G51A 2E2IK 5C3EK 4Q4ZA 4A3JC 4WJ4A 4C45A 5M3FK 2R93K 1PJ5A 1DD5A 2YU9A 5IYDC 4A3FK 3IPJA 5C4JK 3S17K 3ADAC 1Y1WA 2NVQK 2RGRA 3PIPS 1I3QK 2JA7A 5HQHA 3S1QC 2GSOA 2XCOA 4FM9A 2GSNA 2E2JK 3RZOC 4G0WA 3GTKC 2WB1L 3FKIC 3S16K 2VUMC 4U67S 2ZJPS 4NOIA 1INNA 2CFAA 3GTQK 2WAQD 2NVXA 1J6VA 4XSZA 3PO2C 4A93C 3SZZA 2E2HC 5E68A 3K7AC 3T02A 3S15C 1WSRA 1GE9A 5DM6S 1SFOA 2YU9K 3LYWA 3HOXK 4LR2A 4YFXA 4OIQA 2A6EA 3S14C 1IE0A 4ZH4A 2JA7K 1AB4A 1XXBA 3Q3QA 3GIRA 4GTBA 2KQ1A 3HXAA 4JK1A 4C3JK 5IP7K 4IOAS 3OEPA 1EK8A 1TWAA 3GTLA 1Y1VA 2NVXK 5HL7S 3GDZA 1DCPA 2GSUA 5JVOA 4GFQA 4Y52C 3GEHA 5C4XK 4KASA 3GTJA 1SFOK 4P5AA 2ZFZA 2W7VA 4KM9A 3M4OC 4A3IK 1YX2A 2NVTK 4KC6A 3MMLB 4KM8A 1TWCA 5C44K 3S1MC 1I6HK 2V6UA 1IBAA 5IYBC 2ZJQS 3CQZA 4A3DK 3DLLS 3BP3A 4MQ9A 3OPFA 4YG2A 1I50A 1F93A 1EQRA 3S2HC 4YFNA 3GTLK 1Y1VK 4GTAA 2V6SA 1K83C 1O24A 3V4GA 2D6FC 4KN4A 5FLMC 1O2BA 4BLAA 3PIOS 3GTGC 4BY1K 5IOSA 3FOFA 3S2DK 1TWHC 3AQOA 3H0GC 4BBRK 1EH1A 1XXCA 4GTCA 4KATA 3FHZA 3I4NK 5IYCK 2JA8C 4BKWA 4X6AC 3S1NK 3OREA 3TFIA 1TWCK 5L46A 3HOYK 3PO3K 1WOSA 4QJVB 2RH6A 3HOWK 1WIHA 1R9TA 3H3VL 4GZYA 2A68A 4PABA 4OIPA 4A3LK 3HKZD 1I50K 3A8KA 1XPPA 1V5VA 5C3EC 2B63A 1VJEA 2PA8D 4MEXA 1F7UA 1WCMC 4KMAA 5C4JC 5IOQA 2NVQC 4G0VA 4A3MK 1FEUA 2JA5A 3RZDC 4KB2A 4IO9S 3AH5A 1ZBSA 3TTGA 2E2JC 4Y7NK 4C3IK 3L4KA 4A3EK 4AH6A 4A3CK 4XLPA 3S16C 3GTPC 1B4AA 4KAWX 3T01A 3A8JA 2WAQL 1R9TK 4LOWA 3HOUK 2NVYC 1BJTA 5TMCA 2R92K 5M5YK 3N3YA 2B63K 4WFBS 2PPBA 4LLGA 4MEYA 2PMZL 4LQYA 3GTMA 4LJZA 1ZXOA 4OIRA 5CJ9A 1VGXA 2JA7C 1VRQC 4A3KK 4C2MK 1IL2A 4XSXA 3GTKA 1USMA 2VUMA 2GAGC 4OIOA 4BXXK 1F7VA 3LPXA 4C3JC 5IP7C 1YNNA 2PMZD 2GAHC 3SZYA 2EBBA 1ZQ1C 2Y0SD 1O28A 2E2HA 3N0CA 4A3JK 1Y1WK 1O29A 3CF5S 3HOZK 5IYDK 3AD8C 5C4XC 3AD7C 1O2AA 1X31C 4XLNA 2FQOA 1IS1A 1O26A 1C0AA 1IQ0A 3GTOA 3GTMK 3DXJA 3EQLA 1I6HC 2JA6A 3GTKK 1ZYRA 5HL8A 3ERED 2VUMK 1TWFC 4BBSK 4QJVA 2PHCB 4A93K 2KXYA 5JVGS 3WODA 1USOA 1XZQA 1O2FB 3FOEA 3VA7A 3K7AK 2XCRB 3LAJA 3S15K 2FQTA 1YNJA 3BUEA 4C3HK 4P5BA 4KMHA 3S14K 4BBRC 4O2DA 3GEIA 5D4DA 1IW7A 1SMYA 5FJ8K 3GTOK 1TWAK 3HOVC 5CHPA 2JA6K 3HOYC 1WOPA 4RMFA 3JSTA 4GTLA 4A3LC 4J3NA 3GTJK 3AD9C 3HKZL 1TWGC 4BY7K 4FZBA 3A8IA 1WQFA 2R7ZA 3GTGA 2PA8L 1TWHA 3H0GA 4WJ3M 4KN7A 5EGHA 4A3MC 3I4MK 3M4OK 4A3GC 1XZQB 3CQZK 3M3YK 5IORA 3NUHA 2E2IC 4Y7NC 4C3IC 4A3EC 4A3CC 5IYBK 4M1XA 2R93C 5IP9K 4A3FC 3S2HK 3S17C 4LK1A 1R9TC 1DCHA 3HOUC 1I3QC 2R92C 1J6WA 1I6VA 1WCMA 2B63C 1VLOA 4KARA 3N0BA 2R7ZK 1TWHK 3H0GK 5IOTA 4A3BK 3GTQC 2JA8K 1ISEA 1DCOA 4A3KC 4X6AK 1UV7A 3GTPA 4YFKA 4BXXC 4QIWL 2CW0A 2XCQA 2NVYA 4OINA 2YU9C 3HOXC 1JVIA 3S0XA 2O5JA 2Y0SL 2O5IA 2ZUEA 1Y1WC 2L5NA 2JA5K 3HOZC 3FKIA 1RU0A 1WCMK 2Y3PA 4QIWD 2JH3A 1B4BA 3RZDK 3S1RK 3GTMC 2NVXC 1BGWA 1WORA 3LAPA 3GEEA 3GTPK 3AQPA 2BE5A 1KQ4A 4GTEA 4XCHA 1PJ6A 4BBSC 4WFNS 4GT9A 4WCES 3GSIA 4PAAA 4DDQA 2NVYK 1SFOC 3S1QK 2V6TA
chains in the Genus database with same CATH topology
4A3IC 2R93K 2NVTC 4GZYA 4LK0A 5FJ8K 2A68A 3H3VL 5IYDC 2WB1D 4OIPA 5C44C 3HKZD 1TWAK 5C4JK 4A3FK 3GTOK 3RZOK 3S17K 1I50K 3FKIK 3HOVC 2NVQK 4A3LK 5M5XK 1XPPA 4C3HC 5C3EC 3HOYC 1I3QK 2JA6K 3S1QC 2PA8D 4A3DC 4MEXA 2E2JK 3PO2K 1WCMC 1TWAC 3GTOC 5TMFA 5C4JC 1Y1VC 3GTLC 3RZOC 3GTKC 4A3LC 2WB1L 3FKIC 3HKZL 2NVQC 2E2HK 3S16K 1TWGC 2VUMC 4BY7K 4A3MK 4NOIA 2JA6C 3GTQK 2WAQD 3RZDC 2PA8L 4XSZA 2E2JC 3PO2C 4A93C 4C3IK 4BY1C 4Q5SA 4KN7A 4Y7NK 3GTJC 4A3EK 4A3CK 3S2DC 1HQMA 2E2HC 3K7AC 4XLPA 3GTPC 3S16C 4A3MC 3S15C 3I4NC 4BY7C 3I4MK 3M4OK 5IYCC 4A3GC 3CQZK 2WAQL 3M3YK 1R9TK 3S1NC 2YU9K 3HOXK 3HOUK 2E2IC 1TWCC 4Y7NC 4C3IC 4YFXA 4A3EC 2NVYC 4OIQA 5TMCA 4A3CC 5IYBK 3PO3C 2A6EA 3S14C 2R92K 3HOWC 5M5YK 4ZH4A 2R93C 2B63K 2JA7K 3I4MC 2PPBA 5IP9K 3CQZC 4A3FC 4LLGA 3M3YC 4LK1A 1R9TC 3S17C 3S2HK 1I50C 4MEYA 2PMZL 3HOUC 1I3QC 4JK1A 1TWFK 4C3JK 2R92C 5IP7K 2A6HA 4LJZA 4OIRA 4Y52K 1I6VA 2B63C 2JA7C 1BDFA 4A3KK 4C2MK 2NVXK 4XSXA 5IP9C 2R7ZK 4G7OA 4OIOA 1TWHK 3H0GK 4BXXK 4KMUA 4A3BK 3GTQC 4C3JC 4G7ZA 5IP7C 1YNNA 5M3MK 2JA8K 2PMZD 4Y52C 3S1MK 5C4XK 4A3KC 2Y0SD 4X6AK 2R7ZC 1SFOK 4A3JK 1Y1WK 4YFKA 4BXXC 4A3BC 4QIWL 3M4OC 5M5WK 4A3IK 2NVTK 3HOZK 2CW0A 5IYDK 5C44K 3S1MC 1I6HK 5C4XC 4OINA 2YU9C 3HOXC 1K83K 4XLNA 3HOVK 2O5JA 2Y0SL 4G7HA 2O5IA 5IYBC 5FLMK 1Y1WC 4A3DK 3GTMK 2JA5K 4MQ9A 3DXJA 4YG2A 3HOZC 3EQLA 1WCMK 3S2HC 4YFNA 1I6HC 3GTLK 1Y1VK 3GTGK 3GTKK 1K83C 4QIWD 1ZYRA 4AYBL 1TWGK 2VUMK 1TWFC 4KN4A 5FLMC 3RZDK 3S1RK 4BBSK 4QJVA 3GTMC 4C2MC 2NVXC 2JA5C 4A93K 3GTGC 4BY1K 2A69A 3WODA 3GTJK 3S2DK 1TWHC 3H0GC 4BBRK 3H3VD 3K7AK 3GTPK 3I4NK 3S15K 2BE5A 5IYCK 2JA8C 4A3GK 3S1RC 4BBSC 1YNJA 4AYBD 4X6AC 3S1NK 1IW7A 2E2IK 1TWCK 2NVYK 4Q4ZA 1SFOC 4C3HK 4A3JC 5C3EK 3HOYK 4QJVB 3S14K 4BBRC 3PO3K 3S1QK 3HOWK 5M3FK 5D4DA 1SMYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3I C;  2R93 K;  2NVT C;  4GZY A;  4LK0 A;  5FJ8 K;  2A68 A;  3H3V L;  5IYD C;  2WB1 D;  4OIP A;  5C44 C;  3HKZ D;  1TWA K;  5C4J K;  4A3F K;  3GTO K;  3RZO K;  3S17 K;  1I50 K;  3FKI K;  3HOV C;  2NVQ K;  4A3L K;  5M5X K;  1XPP A;  4C3H C;  5C3E C;  3HOY C;  1I3Q K;  2JA6 K;  3S1Q C;  2PA8 D;  4A3D C;  4MEX A;  2E2J K;  3PO2 K;  1WCM C;  1TWA C;  3GTO C;  5TMF A;  5C4J C;  1Y1V C;  3GTL C;  3RZO C;  3GTK C;  4A3L C;  2WB1 L;  3FKI C;  3HKZ L;  2NVQ C;  2E2H K;  3S16 K;  1TWG C;  2VUM C;  4BY7 K;  4A3M K;  4NOI A;  2JA6 C;  3GTQ K;  2WAQ D;  3RZD C;  2PA8 L;  4XSZ A;  2E2J C;  3PO2 C;  4A93 C;  4C3I K;  4BY1 C;  4Q5S A;  4KN7 A;  4Y7N K;  3GTJ C;  4A3E K;  4A3C K;  3S2D C;  1HQM A;  2E2H C;  3K7A C;  4XLP A;  3GTP C;  3S16 C;  4A3M C;  3S15 C;  3I4N C;  4BY7 C;  3I4M K;  3M4O K;  5IYC C;  4A3G C;  3CQZ K;  2WAQ L;  3M3Y K;  1R9T K;  3S1N C;  2YU9 K;  3HOX K;  3HOU K;  2E2I C;  1TWC C;  4Y7N C;  4C3I C;  4YFX A;  4A3E C;  2NVY C;  4OIQ A;  5TMC A;  4A3C C;  5IYB K;  3PO3 C;  2A6E A;  3S14 C;  2R92 K;  3HOW C;  5M5Y K;  4ZH4 A;  2R93 C;  2B63 K;  2JA7 K;  3I4M C;  2PPB A;  5IP9 K;  3CQZ C;  4A3F C;  4LLG A;  3M3Y C;  4LK1 A;  1R9T C;  3S17 C;  3S2H K;  1I50 C;  4MEY A;  2PMZ L;  3HOU C;  1I3Q C;  4JK1 A;  1TWF K;  4C3J K;  2R92 C;  5IP7 K;  2A6H A;  4LJZ A;  4OIR A;  4Y52 K;  1I6V A;  2B63 C;  2JA7 C;  1BDF A;  4A3K K;  4C2M K;  2NVX K;  4XSX A;  5IP9 C;  2R7Z K;  4G7O A;  4OIO A;  1TWH K;  3H0G K;  4BXX K;  4KMU A;  4A3B K;  3GTQ C;  4C3J C;  4G7Z A;  5IP7 C;  1YNN A;  5M3M K;  2JA8 K;  2PMZ D;  4Y52 C;  3S1M K;  5C4X K;  4A3K C;  2Y0S D;  4X6A K;  2R7Z C;  1SFO K;  4A3J K;  1Y1W K;  4YFK A;  4BXX C;  4A3B C;  4QIW L;  3M4O C;  5M5W K;  4A3I K;  2NVT K;  3HOZ K;  2CW0 A;  5IYD K;  5C44 K;  3S1M C;  1I6H K;  5C4X C;  4OIN A;  2YU9 C;  3HOX C;  1K83 K;  4XLN A;  3HOV K;  2O5J A;  2Y0S L;  4G7H A;  2O5I A;  5IYB C;  5FLM K;  1Y1W C;  4A3D K;  3GTM K;  2JA5 K;  4MQ9 A;  3DXJ A;  4YG2 A;  3HOZ C;  3EQL A;  1WCM K;  3S2H C;  4YFN A;  1I6H C;  3GTL K;  1Y1V K;  3GTG K;  3GTK K;  1K83 C;  4QIW D;  1ZYR A;  4AYB L;  1TWG K;  2VUM K;  1TWF C;  4KN4 A;  5FLM C;  3RZD K;  3S1R K;  4BBS K;  4QJV A;  3GTM C;  4C2M C;  2NVX C;  2JA5 C;  4A93 K;  3GTG C;  4BY1 K;  2A69 A;  3WOD A;  3GTJ K;  3S2D K;  1TWH C;  3H0G C;  4BBR K;  3H3V D;  3K7A K;  3GTP K;  3I4N K;  3S15 K;  2BE5 A;  5IYC K;  2JA8 C;  4A3G K;  3S1R C;  4BBS C;  1YNJ A;  4AYB D;  4X6A C;  3S1N K;  1IW7 A;  2E2I K;  1TWC K;  2NVY K;  4Q4Z A;  1SFO C;  4C3H K;  4A3J C;  5C3E K;  3HOY K;  4QJV B;  3S14 K;  4BBR C;  3PO3 K;  3S1Q K;  3HOW K;  5M3F K;  5D4D A;  1SMY A; 
#chains in the Genus database with same CATH topology
 4A3I C;  2NVT C;  4LK0 A;  2WB1 D;  5C44 C;  3RZO K;  2KPU A;  3FKI K;  5M5X K;  4C3H C;  1F9N A;  3TFJ A;  5DM7 S;  1XXA A;  4A3D C;  3BP8 C;  1HI9 A;  1JQW A;  3PO2 K;  3GTO C;  1TWA C;  3GTL C;  5TMF A;  2ZJR S;  1Y1V C;  1EI6 A;  1TWF A;  2E2H K;  2JA6 C;  4KMD A;  1BS2 A;  5JVH S;  4BY1 C;  4Q5S A;  3GTJ C;  4GTF A;  3S2D C;  1HQM A;  1WQG A;  1XZP A;  1EFW A;  3I4N C;  4BY7 C;  5IYC C;  4WF9 S;  4ILD A;  1J98 A;  3S1N C;  4G0U A;  2CFA B;  1TWC C;  3PO3 C;  3HOW C;  3G4C A;  3I4M C;  1K83 A;  3CQZ C;  3M3Y C;  1I50 C;  3L4J A;  1VH2 A;  1TWF K;  5TJ3 A;  2A6H A;  4Y52 K;  1BDF A;  3G4A A;  5IP9 C;  2P8T A;  1ZVU A;  4G7O A;  1TWG A;  3TFH A;  1J6X A;  3QX3 A;  4KMU A;  4WFA S;  5M3M K;  4G7Z A;  4KB4 A;  3S1M K;  2P5M A;  5EGE A;  2R7Z C;  4KDD A;  4A3B C;  5M5W K;  2E2I A;  1XZP B;  3CAG A;  1K83 K;  3HOV K;  4G7H A;  2R93 A;  2L3U A;  5FLM K;  4WIL A;  1WQH A;  1WSV A;  3GTG K;  1I3Q A;  2R92 A;  4AYB L;  1TWG K;  4C2M C;  2JA5 C;  4GTD A;  4IOC S;  4P9S A;  1YCL A;  1L0W A;  1WOO A;  2A69 A;  1O25 A;  5JFE A;  4BLB A;  3GTQ A;  1JOE A;  3H3V D;  3T00 A;  2KWA A;  1PJ7 A;  4A3G K;  2ZUF A;  3S1R C;  1O27 A;  4AYB D;  1G51 A;  2E2I K;  5C3E K;  4Q4Z A;  4A3J C;  4WJ4 A;  4C45 A;  5M3F K;  2R93 K;  1PJ5 A;  1DD5 A;  2YU9 A;  5IYD C;  4A3F K;  3IPJ A;  5C4J K;  3S17 K;  3ADA C;  1Y1W A;  2NVQ K;  2RGR A;  3PIP S;  1I3Q K;  2JA7 A;  5HQH A;  3S1Q C;  2GSO A;  2XCO A;  4FM9 A;  2GSN A;  2E2J K;  3RZO C;  4G0W A;  3GTK C;  2WB1 L;  3FKI C;  3S16 K;  2VUM C;  4U67 S;  2ZJP S;  4NOI A;  1INN A;  2CFA A;  3GTQ K;  2WAQ D;  2NVX A;  1J6V A;  4XSZ A;  3PO2 C;  4A93 C;  3SZZ A;  2E2H C;  5E68 A;  3K7A C;  3T02 A;  3S15 C;  1WSR A;  1GE9 A;  5DM6 S;  1SFO A;  2YU9 K;  3LYW A;  3HOX K;  4LR2 A;  4YFX A;  4OIQ A;  2A6E A;  3S14 C;  1IE0 A;  4ZH4 A;  2JA7 K;  1AB4 A;  1XXB A;  3Q3Q A;  3GIR A;  4GTB A;  2KQ1 A;  3HXA A;  4JK1 A;  4C3J K;  5IP7 K;  4IOA S;  3OEP A;  1EK8 A;  1TWA A;  3GTL A;  1Y1V A;  2NVX K;  5HL7 S;  3GDZ A;  1DCP A;  2GSU A;  5JVO A;  4GFQ A;  4Y52 C;  3GEH A;  5C4X K;  4KAS A;  3GTJ A;  1SFO K;  4P5A A;  2ZFZ A;  2W7V A;  4KM9 A;  3M4O C;  4A3I K;  1YX2 A;  2NVT K;  4KC6 A;  3MML B;  4KM8 A;  1TWC A;  5C44 K;  3S1M C;  1I6H K;  2V6U A;  1IBA A;  5IYB C;  2ZJQ S;  3CQZ A;  4A3D K;  3DLL S;  3BP3 A;  4MQ9 A;  3OPF A;  4YG2 A;  1I50 A;  1F93 A;  1EQR A;  3S2H C;  4YFN A;  3GTL K;  1Y1V K;  4GTA A;  2V6S A;  1K83 C;  1O24 A;  3V4G A;  2D6F C;  4KN4 A;  5FLM C;  1O2B A;  4BLA A;  3PIO S;  3GTG C;  4BY1 K;  5IOS A;  3FOF A;  3S2D K;  1TWH C;  3AQO A;  3H0G C;  4BBR K;  1EH1 A;  1XXC A;  4GTC A;  4KAT A;  3FHZ A;  3I4N K;  5IYC K;  2JA8 C;  4BKW A;  4X6A C;  3S1N K;  3ORE A;  3TFI A;  1TWC K;  5L46 A;  3HOY K;  3PO3 K;  1WOS A;  4QJV B;  2RH6 A;  3HOW K;  1WIH A;  1R9T A;  3H3V L;  4GZY A;  2A68 A;  4PAB A;  4OIP A;  4A3L K;  3HKZ D;  1I50 K;  3A8K A;  1XPP A;  1V5V A;  5C3E C;  2B63 A;  1VJE A;  2PA8 D;  4MEX A;  1F7U A;  1WCM C;  4KMA A;  5C4J C;  5IOQ A;  2NVQ C;  4G0V A;  4A3M K;  1FEU A;  2JA5 A;  3RZD C;  4KB2 A;  4IO9 S;  3AH5 A;  1ZBS A;  3TTG A;  2E2J C;  4Y7N K;  4C3I K;  3L4K A;  4A3E K;  4AH6 A;  4A3C K;  4XLP A;  3S16 C;  3GTP C;  1B4A A;  4KAW X;  3T01 A;  3A8J A;  2WAQ L;  1R9T K;  4LOW A;  3HOU K;  2NVY C;  1BJT A;  5TMC A;  2R92 K;  5M5Y K;  3N3Y A;  2B63 K;  4WFB S;  2PPB A;  4LLG A;  4MEY A;  2PMZ L;  4LQY A;  3GTM A;  4LJZ A;  1ZXO A;  4OIR A;  5CJ9 A;  1VGX A;  2JA7 C;  1VRQ C;  4A3K K;  4C2M K;  1IL2 A;  4XSX A;  3GTK A;  1USM A;  2VUM A;  2GAG C;  4OIO A;  4BXX K;  1F7V A;  3LPX A;  4C3J C;  5IP7 C;  1YNN A;  2PMZ D;  2GAH C;  3SZY A;  2EBB A;  1ZQ1 C;  2Y0S D;  1O28 A;  2E2H A;  3N0C A;  4A3J K;  1Y1W K;  1O29 A;  3CF5 S;  3HOZ K;  5IYD K;  3AD8 C;  5C4X C;  3AD7 C;  1O2A A;  1X31 C;  4XLN A;  2FQO A;  1IS1 A;  1O26 A;  1C0A A;  1IQ0 A;  3GTO A;  3GTM K;  3DXJ A;  3EQL A;  1I6H C;  2JA6 A;  3GTK K;  1ZYR A;  5HL8 A;  3ERE D;  2VUM K;  1TWF C;  4BBS K;  4QJV A;  2PHC B;  4A93 K;  2KXY A;  5JVG S;  3WOD A;  1USO A;  1XZQ A;  1O2F B;  3FOE A;  3VA7 A;  3K7A K;  2XCR B;  3LAJ A;  3S15 K;  2FQT A;  1YNJ A;  3BUE A;  4C3H K;  4P5B A;  4KMH A;  3S14 K;  4BBR C;  4O2D A;  3GEI A;  5D4D A;  1IW7 A;  1SMY A;  5FJ8 K;  3GTO K;  1TWA K;  3HOV C;  5CHP A;  2JA6 K;  3HOY C;  1WOP A;  4RMF A;  3JST A;  4GTL A;  4A3L C;  4J3N A;  3GTJ K;  3AD9 C;  3HKZ L;  1TWG C;  4BY7 K;  4FZB A;  3A8I A;  1WQF A;  2R7Z A;  3GTG A;  2PA8 L;  1TWH A;  3H0G A;  4WJ3 M;  4KN7 A;  5EGH A;  4A3M C;  3I4M K;  3M4O K;  4A3G C;  1XZQ B;  3CQZ K;  3M3Y K;  5IOR A;  3NUH A;  2E2I C;  4Y7N C;  4C3I C;  4A3E C;  4A3C C;  5IYB K;  4M1X A;  2R93 C;  5IP9 K;  4A3F C;  3S2H K;  3S17 C;  4LK1 A;  1R9T C;  1DCH A;  3HOU C;  1I3Q C;  2R92 C;  1J6W A;  1I6V A;  1WCM A;  2B63 C;  1VLO A;  4KAR A;  3N0B A;  2R7Z K;  1TWH K;  3H0G K;  5IOT A;  4A3B K;  3GTQ C;  2JA8 K;  1ISE A;  1DCO A;  4A3K C;  4X6A K;  1UV7 A;  3GTP A;  4YFK A;  4BXX C;  4QIW L;  2CW0 A;  2XCQ A;  2NVY A;  4OIN A;  2YU9 C;  3HOX C;  1JVI A;  3S0X A;  2O5J A;  2Y0S L;  2O5I A;  2ZUE A;  1Y1W C;  2L5N A;  2JA5 K;  3HOZ C;  3FKI A;  1RU0 A;  1WCM K;  2Y3P A;  4QIW D;  2JH3 A;  1B4B A;  3RZD K;  3S1R K;  3GTM C;  2NVX C;  1BGW A;  1WOR A;  3LAP A;  3GEE A;  3GTP K;  3AQP A;  2BE5 A;  1KQ4 A;  4GTE A;  4XCH A;  1PJ6 A;  4BBS C;  4WFN S;  4GT9 A;  4WCE S;  3GSI A;  4PAA A;  4DDQ A;  2NVY K;  1SFO C;  3S1Q K;  2V6T A; 
#chains in the Genus database with same CATH homology
 4A3I C;  2R93 K;  2NVT C;  4GZY A;  4LK0 A;  5FJ8 K;  2A68 A;  3H3V L;  5IYD C;  2WB1 D;  4OIP A;  5C44 C;  3HKZ D;  1TWA K;  5C4J K;  4A3F K;  3GTO K;  3RZO K;  3S17 K;  1I50 K;  3FKI K;  3HOV C;  2NVQ K;  4A3L K;  5M5X K;  1XPP A;  4C3H C;  5C3E C;  3HOY C;  1I3Q K;  2JA6 K;  3S1Q C;  2PA8 D;  4A3D C;  4MEX A;  2E2J K;  3PO2 K;  1WCM C;  1TWA C;  3GTO C;  5TMF A;  5C4J C;  1Y1V C;  3GTL C;  3RZO C;  3GTK C;  4A3L C;  2WB1 L;  3FKI C;  3HKZ L;  2NVQ C;  2E2H K;  3S16 K;  1TWG C;  2VUM C;  4BY7 K;  4A3M K;  4NOI A;  2JA6 C;  3GTQ K;  2WAQ D;  3RZD C;  2PA8 L;  4XSZ A;  2E2J C;  3PO2 C;  4A93 C;  4C3I K;  4BY1 C;  4Q5S A;  4KN7 A;  4Y7N K;  3GTJ C;  4A3E K;  4A3C K;  3S2D C;  1HQM A;  2E2H C;  3K7A C;  4XLP A;  3GTP C;  3S16 C;  4A3M C;  3S15 C;  3I4N C;  4BY7 C;  3I4M K;  3M4O K;  5IYC C;  4A3G C;  3CQZ K;  2WAQ L;  3M3Y K;  1R9T K;  3S1N C;  2YU9 K;  3HOX K;  3HOU K;  2E2I C;  1TWC C;  4Y7N C;  4C3I C;  4YFX A;  4A3E C;  2NVY C;  4OIQ A;  5TMC A;  4A3C C;  5IYB K;  3PO3 C;  2A6E A;  3S14 C;  2R92 K;  3HOW C;  5M5Y K;  4ZH4 A;  2R93 C;  2B63 K;  2JA7 K;  3I4M C;  2PPB A;  5IP9 K;  3CQZ C;  4A3F C;  4LLG A;  3M3Y C;  4LK1 A;  1R9T C;  3S17 C;  3S2H K;  1I50 C;  4MEY A;  2PMZ L;  3HOU C;  1I3Q C;  4JK1 A;  1TWF K;  4C3J K;  2R92 C;  5IP7 K;  2A6H A;  4LJZ A;  4OIR A;  4Y52 K;  1I6V A;  2B63 C;  2JA7 C;  1BDF A;  4A3K K;  4C2M K;  2NVX K;  4XSX A;  5IP9 C;  2R7Z K;  4G7O A;  4OIO A;  1TWH K;  3H0G K;  4BXX K;  4KMU A;  4A3B K;  3GTQ C;  4C3J C;  4G7Z A;  5IP7 C;  1YNN A;  5M3M K;  2JA8 K;  2PMZ D;  4Y52 C;  3S1M K;  5C4X K;  4A3K C;  2Y0S D;  4X6A K;  2R7Z C;  1SFO K;  4A3J K;  1Y1W K;  4YFK A;  4BXX C;  4A3B C;  4QIW L;  3M4O C;  5M5W K;  4A3I K;  2NVT K;  3HOZ K;  2CW0 A;  5IYD K;  5C44 K;  3S1M C;  1I6H K;  5C4X C;  4OIN A;  2YU9 C;  3HOX C;  1K83 K;  4XLN A;  3HOV K;  2O5J A;  2Y0S L;  4G7H A;  2O5I A;  5IYB C;  5FLM K;  1Y1W C;  4A3D K;  3GTM K;  2JA5 K;  4MQ9 A;  3DXJ A;  4YG2 A;  3HOZ C;  3EQL A;  1WCM K;  3S2H C;  4YFN A;  1I6H C;  3GTL K;  1Y1V K;  3GTG K;  3GTK K;  1K83 C;  4QIW D;  1ZYR A;  4AYB L;  1TWG K;  2VUM K;  1TWF C;  4KN4 A;  5FLM C;  3RZD K;  3S1R K;  4BBS K;  4QJV A;  3GTM C;  4C2M C;  2NVX C;  2JA5 C;  4A93 K;  3GTG C;  4BY1 K;  2A69 A;  3WOD A;  3GTJ K;  3S2D K;  1TWH C;  3H0G C;  4BBR K;  3H3V D;  3K7A K;  3GTP K;  3I4N K;  3S15 K;  2BE5 A;  5IYC K;  2JA8 C;  4A3G K;  3S1R C;  4BBS C;  1YNJ A;  4AYB D;  4X6A C;  3S1N K;  1IW7 A;  2E2I K;  1TWC K;  2NVY K;  4Q4Z A;  1SFO C;  4C3H K;  4A3J C;  5C3E K;  3HOY K;  4QJV B;  3S14 K;  4BBR C;  3PO3 K;  3S1Q K;  3HOW K;  5M3F K;  5D4D A;  1SMY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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