4A3KC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3kC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3kC01
1TWFC 4YFKA 5FLMC 2Y0SD 5IYBC 5C44K 2A69A 3S16C 4A3LK 1XPPA 4BY7C 4OIRA 5C4XC 2JA8C 4A3IK 4LK0A 4KN7A 1SFOC 3PO3C 3S2DC 1I3QC 2VUMK 4OINA 3S1MC 1K83C 2R93K 1Y1WK 1BDFA 4ZH4A 3WODA 4BBRC 3CQZK 5C3EC 4MQ9A 5TMCA 3GTQC 4C3JK 4BY1C 4A3JC 4A93C 3S1NK 2BE5A 4BBSC 2A68A 5IP7C 1I6HC 4Q5SA 3GTOK 3GTPK 3GTKC 5C4JC 5M3MK 3S17K 3S14C 1TWAK 3H0GK 2YU9K 3S15K 2E2IK 3GTJC 2R7ZC 2NVXC 1TWGC 4A3GC 3HOUK 3GTMC 4C2MC 1TWFK 4Q4ZA 2R92C 5FLMK 5M5XK 5IYBK 3FKIC 3S16K 3K7AC 4BY7K 5C4XK 2JA8K 4Y7NC 4C3HC 1SFOK 3PO3K 3S2DK 1I3QK 3S1MK 4GZYA 1K83K 4A3MC 1I6VA 5D4DA 2JA5C 3I4MC 4X6AC 1TWCC 4BBRK 5C3EK 3GTQK 4BY1K 4A3JK 4A93K 3HOXC 4A3FC 5FJ8K 3HOWC 4BBSK 4YFNA 5IP7K 2JA7C 1I6HK 4LJZA 3HOVC 1SMYA 4QJVA 4A3DC 3GTKK 4G7HA 5C4JK 3S14K 4XSZA 4QIWL 5M5YK 1I50C 3S1QC 3GTJK 1YNJA 2NVXK 1TWGK 2R7ZK 4A3GK 4A3EC 4G7OA 4QIWD 3GTMK 4JK1A 5M5WK 4C2MK 4A3CC 4XSXA 2R92K 1R9TC 5IYDC 2E2HC 3M3YC 4A3KC 4OIOA 3EQLA 4C3IC 4Y52C 5IYCC 4XLPA 3FKIK 2B63C 1IW7A 3K7AK 4MEXA 3PO2C 4A3BC 4C3HK 4Y7NK 2A6HA 2JA6C 2PA8L 4A3MK 2JA5K 3I4MK 2WB1L 4X6AK 1Y1VC 2PA8D 3GTGC 3M4OC 1HQMA 1TWCK 1ZYRA 2WB1D 5TMFA 3HOXK 3GTLC 4BXXC 4A3FK 3DXJA 4YG2A 3HOZC 3HOWK 1WCMC 2WAQL 3S1RC 2PPBA 2PMZL 5M3FK 2JA7K 3HOVK 2NVYC 4A3DK 2NVTC 2WAQD 4NOIA 2PMZD 2E2JC 1I50K 3S1QK 5IP9C 3RZDC 1TWHC 4A3EK 3RZOC 4XLNA 2A6EA 3I4NC 3H3VL 4A3CK 3HOYC 4QJVB 4AYBL 1R9TK 3S2HC 5IYDK 2E2HK 3H3VD 3M3YK 4A3KK 2NVQC 5IYCK 4C3IK 4Y52K 2CW0A 4AYBD 2B63K 2O5IA 2O5JA 3PO2K 4A3BK 4LLGA 1YNNA 2JA6K 4KN4A 5C44C 1Y1VK 4A3LC 3GTGK 3M4OK 4MEYA 4OIPA 4A3IC 4LK1A 2VUMC 3GTLK 4G7ZA 2R93C 4KMUA 1Y1WC 3HOZK 4BXXK 1WCMK 3S1RK 3CQZC 4YFXA 3S1NC 2NVYK 4C3JC 2NVTK 2E2JK 5IP9K 3RZDK 1TWHK 3RZOK 3I4NK 3GTOC 3HKZL 3GTPC 3S17C 3HOYK 3S2HK 1TWAC 3H0GC 3HKZD 2YU9C 2E2IC 3S15C 2NVQK 3HOUC 4OIQA 2Y0SL
chains in the Genus database with same CATH superfamily
1BGWA 1WOSA 5IYBC 5C44K 3S16C 1SFOC 3PO3C 2VUMK 4OINA 3N0CA 1Y1WK 3BUEA 3JSTA 1WQGA 3CQZK 3S1NK 4A3JC 1O2BA 4BBSC 4P5BA 1DCOA 3SZZA 1PJ5A 4Q5SA 3GTPK 3S17K 3GTOA 2KQ1A 2R7ZC 1L0WA 3FHZA 4C45A 2R92C 3TFIA 2XCRB 4Y7NC 1J6XA 3BP8C 3CAGA 2GAHC 3FOEA 2JA5C 5D4DA 1WIHA 1TWCC 4GTBA 4BY1K 5DM7S 4A3FC 4YFNA 4KC6A 3CQZA 4QJVA 1WSRA 3GTKK 5JVGS 5C4JK 4IOCS 1VRQC 3N3YA 1TWGK 3L4JA 1ZQ1C 2ZJQS 3LAPA 4C3IC 4Y52C 4U67S 2B63C 4MEXA 3PO2C 4C3HK 3VA7A 1IS1A 3GEHA 4GTDA 1HQMA 5TMFA 4WJ4A 3HOZC 1WCMC 2PMZL 1O2FB 5M3FK 3BP3A 1GE9A 3H3VL 1XXCA 2NVQC 3LAJA 4A3BK 4LLGA 1O28A 3T01A 5C44C 2JA6A 3GTGK 4MEYA 3GEEA 1EFWA 4P5AA 5IOQA 2VUMC 4BXXK 1Y1WC 1HI9A 3GTLA 1WSVA 3CQZC 1XZPB 3S1NC 2NVYK 2Y3PA 1PJ6A 1VGXA 2XCOA 1TWHK 3RZOK 3GTPC 5DM6S 3S17C 1KQ4A 3FOFA 1B4BA 1WQHA 3AH5A 4YFKA 4BKWA 2FQTA 3SZYA 2D6FC 3AD8C 3NUHA 4LK0A 3TFHA 3ERED 4WJ3M 1IBAA 4WFAS 4KAWX 1BDFA 4GTLA 3WODA 4MQ9A 4C3JK 4BY1C 1XXBA 1BJTA 3GSIA 3GTOK 5IOSA 1X31C 3GTKC 5C4JC 5M3MK 1VJEA 2YU9K 1TWGC 3H0GA 3HOUK 2E2IA 1ISEA 1USOA 5IORA 3T00A 5C4XK 2GSOA 2JA8K 4C3HC 5CHPA 1I3QK 1WOOA 4GZYA 1I6VA 1K83A 5C3EK 3GTQK 4KM9A 2ZUFA 2RH6A 3LPXA 4KASA 5IP7K 1I6HK 1SMYA 4BLBA 4XSZA 1F93A 2NVXK 4A3GK 4G7OA 3GTJA 1DCPA 1EH1A 3GTMA 2YU9A 4GTEA 3A8IA 2CFAA 3EQLA 3FKIK 3K7AK 2KWAA 1F7UA 4A3BC 1JVIA 1XZQA 2A6HA 3T02A 3I4MK 4X6AK 3GTGC 1O29A 1ZYRA 1XXAA 5JVOA 2WB1D 1I3QA 4BXXC 3HOWK 4WILA 3GTQA 3HOVK 4WFBS 2NVYC 3OREA 2JA7A 2WAQD 1TWHC 3L4KA 3RZOC 4XLNA 1I50A 4LOWA 2A6EA 3AQPA 4A3CK 4QJVB 5EGHA 3M3YK 4J3NA 4XCHA 4A3KK 2NVXA 1R9TA 2E2HA 3AD9C 2JA6K 4KN4A 1J6WA 3FKIA 3QX3A 2V6SA 3DLLS 4OIPA 1Y1VA 3GTLK 1F9NA 4LQYA 1RU0A 2ZJRS 4YFXA 1BS2A 4C3JC 2NVTK 2E2JK 1EQRA 1VH2A 5IP9K 4G0VA 4LR2A 3I4NK 3GTOC 1INNA 2YU9C 3HOUC 1JQWA 4G0WA 4KMDA 4DDQA 4A3LK 1XPPA 5C4XC 1IE0A 2JA8C 1WQFA 4KN7A 1I3QC 1AB4A 4KMAA 4ZH4A 2P5MA 5C3EC 3GTQC 2BE5A 4ILDA 3OPFA 2A68A 4KM8A 5IP7C 1I6HC 4G0UA 1YX2A 1TWAK 3H0GK 1F7VA 2E2IK 2ZJPS 1YCLA 2NVXC 4A3GC 1TWFK 5FLMK 5M5XK 4FZBA 3FKIC 3K7AC 4M1XA 1DCHA 4BY7K 3S2DK 3S1MK 4KATA 1SFOA 1K83K 3I4MC 1WORA 4X6AC 4BBRK 4A93K 5FJ8K 3HOWC 1JOEA 3OEPA 5HL8A 1IQ0A 3HOVC 4G7HA 3GIRA 3S14K 1O27A 4PAAA 3GTJK 1YNJA 4QIWD 3GTMK 4JK1A 5M5WK 2R7ZA 4C2MK 4A3CC 4XSXA 2P8TA 1TWAA 3M3YC 4GTFA 4A3KC 2R92A 4IOAS 2L5NA 3TTGA 4XLPA 1IW7A 1TWFA 4O2DA 2V6TA 3S0XA 2JA6C 4KARA 3ADAC 4A3MK 1DD5A 2WB1L 2PA8D 1J98A 2JA5A 2KXYA 1TWCA 3HOXK 3GTLC 4YG2A 3PIOS 3AQOA 2PHCB 2PPBA 2WAQL 2JA7K 5JFEA 4A3DK 2ZFZA 2NVTC 3MMLB 2E2JC 1I50K 3S1QK 1B4AA 5IP9C 4AH6A 4A3EK 3I4NC 4GTCA 1R9TK 2GSUA 5IYDK 2E2HK 5IYCK 2CW0A 4AYBD 2O5IA 2O5JA 2FQOA 2B63A 1C0AA 3Q3QA 2CFAB 1Y1VK 4A3LC 3M4OK 2GSNA 4LK1A 1XZQB 4G7ZA 4KMUA 1ZXOA 3S1RK 1USMA 1WCMA 4GTAA 3G4CA 5HQHA 3G4AA 3PIPS 3RZDK 1EK8A 3HOYK 3S2HK 1TWAC 3H0GC 3HKZD 2E2IC 1FEUA 4OIQA 5CJ9A 1IL2A 1TWFC 5FLMC 2Y0SD 2A69A 4BY7C 4OIRA 4A3IK 4WFNS 3S2DC 3V4GA 3S1MC 3AD7C 1K83C 2R93K 5IOTA 2VUMA 4BBRC 1Y1WA 5TMCA 2KPUA 1VLOA 4A93C 2JH3A 4FM9A 3GEIA 5TJ3A 3S14C 1WOPA 3TFJA 3GTPA 2V6UA 3S15K 3GTJC 4GT9A 3GTMC 1J6VA 4C2MC 4Q4ZA 5IYBK 2XCQA 3S16K 1SFOK 5EGEA 3PO3K 1O25A 4A3MC 4RMFA 4GFQA 3A8JA 5L46A 4A3JK 2R93A 3HOXC 4BBSK 4BLAA 2JA7C 4LJZA 5JVHS 4A3DC 4KB2A 4QIWL 5M5YK 1I50C 3GTKA 3S1QC 2R7ZK 4A3EC 1O24A 1TWGA 4WCES 2R92K 1R9TC 5IYDC 2E2HC 4OIOA 5IYCC 4Y7NK 1ZVUA 4KMHA 2W7VA 2PA8L 2JA5K 1XZPA 1Y1VC 1TWCK 3M4OC 1ZBSA 4P9SA 4KDDA 4A3FK 3DXJA 2ZUEA 3S1RC 1EI6A 4PABA 4NOIA 2PMZD 3A8KA 2EBBA 5HL7S 3RZDC 1O26A 1O2AA 4WF9S 3HOYC 4AYBL 3S2HC 3H3VD 4C3IK 4Y52K 2B63K 3PO2K 1YNNA 4KB4A 3LYWA 4A3IC 3HXAA 3GTGA 1V5VA 1PJ7A 1G51A 3CF5S 2R93C 3HOZK 1WCMK 3GDZA 2RGRA 4IO9S 2GAGC 2NVYA 3HKZL 1TWHA 3IPJA 2L3UA 1UV7A 3S15C 2NVQK 5E68A 3N0BA 2Y0SL
chains in the Genus database with same CATH topology
1TWFC 4YFKA 5FLMC 2Y0SD 5IYBC 5C44K 2A69A 3S16C 4A3LK 1XPPA 4BY7C 4OIRA 5C4XC 2JA8C 4A3IK 4LK0A 4KN7A 1SFOC 3PO3C 3S2DC 1I3QC 2VUMK 4OINA 3S1MC 1K83C 2R93K 1Y1WK 1BDFA 4ZH4A 3WODA 4BBRC 3CQZK 5C3EC 4MQ9A 5TMCA 3GTQC 4C3JK 4BY1C 4A3JC 4A93C 3S1NK 2BE5A 4BBSC 2A68A 5IP7C 1I6HC 4Q5SA 3GTOK 3GTPK 3GTKC 5C4JC 5M3MK 3S17K 3S14C 1TWAK 3H0GK 2YU9K 3S15K 2E2IK 3GTJC 2R7ZC 2NVXC 1TWGC 4A3GC 3HOUK 3GTMC 4C2MC 1TWFK 4Q4ZA 2R92C 5FLMK 5M5XK 5IYBK 3FKIC 3S16K 3K7AC 4BY7K 5C4XK 2JA8K 4Y7NC 4C3HC 1SFOK 3PO3K 3S2DK 1I3QK 3S1MK 4GZYA 1K83K 4A3MC 1I6VA 5D4DA 2JA5C 3I4MC 4X6AC 1TWCC 4BBRK 5C3EK 3GTQK 4BY1K 4A3JK 4A93K 3HOXC 4A3FC 5FJ8K 3HOWC 4BBSK 4YFNA 5IP7K 2JA7C 1I6HK 4LJZA 3HOVC 1SMYA 4QJVA 4A3DC 3GTKK 4G7HA 5C4JK 3S14K 4XSZA 4QIWL 5M5YK 1I50C 3S1QC 3GTJK 1YNJA 2NVXK 1TWGK 2R7ZK 4A3GK 4A3EC 4G7OA 4QIWD 3GTMK 4JK1A 5M5WK 4C2MK 4A3CC 4XSXA 2R92K 1R9TC 5IYDC 2E2HC 3M3YC 4A3KC 4OIOA 3EQLA 4C3IC 4Y52C 5IYCC 4XLPA 3FKIK 2B63C 1IW7A 3K7AK 4MEXA 3PO2C 4A3BC 4C3HK 4Y7NK 2A6HA 2JA6C 2PA8L 4A3MK 2JA5K 3I4MK 2WB1L 4X6AK 1Y1VC 2PA8D 3GTGC 3M4OC 1HQMA 1TWCK 1ZYRA 2WB1D 5TMFA 3HOXK 3GTLC 4BXXC 4A3FK 3DXJA 4YG2A 3HOZC 3HOWK 1WCMC 2WAQL 3S1RC 2PPBA 2PMZL 5M3FK 2JA7K 3HOVK 2NVYC 4A3DK 2NVTC 2WAQD 4NOIA 2PMZD 2E2JC 1I50K 3S1QK 5IP9C 3RZDC 1TWHC 4A3EK 3RZOC 4XLNA 2A6EA 3I4NC 3H3VL 4A3CK 3HOYC 4QJVB 4AYBL 1R9TK 3S2HC 5IYDK 2E2HK 3H3VD 3M3YK 4A3KK 2NVQC 5IYCK 4C3IK 4Y52K 2CW0A 4AYBD 2B63K 2O5IA 2O5JA 3PO2K 4A3BK 4LLGA 1YNNA 2JA6K 4KN4A 5C44C 1Y1VK 4A3LC 3GTGK 3M4OK 4MEYA 4OIPA 4A3IC 4LK1A 2VUMC 3GTLK 4G7ZA 2R93C 4KMUA 1Y1WC 3HOZK 4BXXK 1WCMK 3S1RK 3CQZC 4YFXA 3S1NC 2NVYK 4C3JC 2NVTK 2E2JK 5IP9K 3RZDK 1TWHK 3RZOK 3I4NK 3GTOC 3HKZL 3GTPC 3S17C 3HOYK 3S2HK 1TWAC 3H0GC 3HKZD 2YU9C 2E2IC 3S15C 2NVQK 3HOUC 4OIQA 2Y0SL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWF C;  4YFK A;  5FLM C;  2Y0S D;  5IYB C;  5C44 K;  2A69 A;  3S16 C;  4A3L K;  1XPP A;  4BY7 C;  4OIR A;  5C4X C;  2JA8 C;  4A3I K;  4LK0 A;  4KN7 A;  1SFO C;  3PO3 C;  3S2D C;  1I3Q C;  2VUM K;  4OIN A;  3S1M C;  1K83 C;  2R93 K;  1Y1W K;  1BDF A;  4ZH4 A;  3WOD A;  4BBR C;  3CQZ K;  5C3E C;  4MQ9 A;  5TMC A;  3GTQ C;  4C3J K;  4BY1 C;  4A3J C;  4A93 C;  3S1N K;  2BE5 A;  4BBS C;  2A68 A;  5IP7 C;  1I6H C;  4Q5S A;  3GTO K;  3GTP K;  3GTK C;  5C4J C;  5M3M K;  3S17 K;  3S14 C;  1TWA K;  3H0G K;  2YU9 K;  3S15 K;  2E2I K;  3GTJ C;  2R7Z C;  2NVX C;  1TWG C;  4A3G C;  3HOU K;  3GTM C;  4C2M C;  1TWF K;  4Q4Z A;  2R92 C;  5FLM K;  5M5X K;  5IYB K;  3FKI C;  3S16 K;  3K7A C;  4BY7 K;  5C4X K;  2JA8 K;  4Y7N C;  4C3H C;  1SFO K;  3PO3 K;  3S2D K;  1I3Q K;  3S1M K;  4GZY A;  1K83 K;  4A3M C;  1I6V A;  5D4D A;  2JA5 C;  3I4M C;  4X6A C;  1TWC C;  4BBR K;  5C3E K;  3GTQ K;  4BY1 K;  4A3J K;  4A93 K;  3HOX C;  4A3F C;  5FJ8 K;  3HOW C;  4BBS K;  4YFN A;  5IP7 K;  2JA7 C;  1I6H K;  4LJZ A;  3HOV C;  1SMY A;  4QJV A;  4A3D C;  3GTK K;  4G7H A;  5C4J K;  3S14 K;  4XSZ A;  4QIW L;  5M5Y K;  1I50 C;  3S1Q C;  3GTJ K;  1YNJ A;  2NVX K;  1TWG K;  2R7Z K;  4A3G K;  4A3E C;  4G7O A;  4QIW D;  3GTM K;  4JK1 A;  5M5W K;  4C2M K;  4A3C C;  4XSX A;  2R92 K;  1R9T C;  5IYD C;  2E2H C;  3M3Y C;  4A3K C;  4OIO A;  3EQL A;  4C3I C;  4Y52 C;  5IYC C;  4XLP A;  3FKI K;  2B63 C;  1IW7 A;  3K7A K;  4MEX A;  3PO2 C;  4A3B C;  4C3H K;  4Y7N K;  2A6H A;  2JA6 C;  2PA8 L;  4A3M K;  2JA5 K;  3I4M K;  2WB1 L;  4X6A K;  1Y1V C;  2PA8 D;  3GTG C;  3M4O C;  1HQM A;  1TWC K;  1ZYR A;  2WB1 D;  5TMF A;  3HOX K;  3GTL C;  4BXX C;  4A3F K;  3DXJ A;  4YG2 A;  3HOZ C;  3HOW K;  1WCM C;  2WAQ L;  3S1R C;  2PPB A;  2PMZ L;  5M3F K;  2JA7 K;  3HOV K;  2NVY C;  4A3D K;  2NVT C;  2WAQ D;  4NOI A;  2PMZ D;  2E2J C;  1I50 K;  3S1Q K;  5IP9 C;  3RZD C;  1TWH C;  4A3E K;  3RZO C;  4XLN A;  2A6E A;  3I4N C;  3H3V L;  4A3C K;  3HOY C;  4QJV B;  4AYB L;  1R9T K;  3S2H C;  5IYD K;  2E2H K;  3H3V D;  3M3Y K;  4A3K K;  2NVQ C;  5IYC K;  4C3I K;  4Y52 K;  2CW0 A;  4AYB D;  2B63 K;  2O5I A;  2O5J A;  3PO2 K;  4A3B K;  4LLG A;  1YNN A;  2JA6 K;  4KN4 A;  5C44 C;  1Y1V K;  4A3L C;  3GTG K;  3M4O K;  4MEY A;  4OIP A;  4A3I C;  4LK1 A;  2VUM C;  3GTL K;  4G7Z A;  2R93 C;  4KMU A;  1Y1W C;  3HOZ K;  4BXX K;  1WCM K;  3S1R K;  3CQZ C;  4YFX A;  3S1N C;  2NVY K;  4C3J C;  2NVT K;  2E2J K;  5IP9 K;  3RZD K;  1TWH K;  3RZO K;  3I4N K;  3GTO C;  3HKZ L;  3GTP C;  3S17 C;  3HOY K;  3S2H K;  1TWA C;  3H0G C;  3HKZ D;  2YU9 C;  2E2I C;  3S15 C;  2NVQ K;  3HOU C;  4OIQ A;  2Y0S L; 
#chains in the Genus database with same CATH topology
 1BGW A;  1WOS A;  5IYB C;  5C44 K;  3S16 C;  1SFO C;  3PO3 C;  2VUM K;  4OIN A;  3N0C A;  1Y1W K;  3BUE A;  3JST A;  1WQG A;  3CQZ K;  3S1N K;  4A3J C;  1O2B A;  4BBS C;  4P5B A;  1DCO A;  3SZZ A;  1PJ5 A;  4Q5S A;  3GTP K;  3S17 K;  3GTO A;  2KQ1 A;  2R7Z C;  1L0W A;  3FHZ A;  4C45 A;  2R92 C;  3TFI A;  2XCR B;  4Y7N C;  1J6X A;  3BP8 C;  3CAG A;  2GAH C;  3FOE A;  2JA5 C;  5D4D A;  1WIH A;  1TWC C;  4GTB A;  4BY1 K;  5DM7 S;  4A3F C;  4YFN A;  4KC6 A;  3CQZ A;  4QJV A;  1WSR A;  3GTK K;  5JVG S;  5C4J K;  4IOC S;  1VRQ C;  3N3Y A;  1TWG K;  3L4J A;  1ZQ1 C;  2ZJQ S;  3LAP A;  4C3I C;  4Y52 C;  4U67 S;  2B63 C;  4MEX A;  3PO2 C;  4C3H K;  3VA7 A;  1IS1 A;  3GEH A;  4GTD A;  1HQM A;  5TMF A;  4WJ4 A;  3HOZ C;  1WCM C;  2PMZ L;  1O2F B;  5M3F K;  3BP3 A;  1GE9 A;  3H3V L;  1XXC A;  2NVQ C;  3LAJ A;  4A3B K;  4LLG A;  1O28 A;  3T01 A;  5C44 C;  2JA6 A;  3GTG K;  4MEY A;  3GEE A;  1EFW A;  4P5A A;  5IOQ A;  2VUM C;  4BXX K;  1Y1W C;  1HI9 A;  3GTL A;  1WSV A;  3CQZ C;  1XZP B;  3S1N C;  2NVY K;  2Y3P A;  1PJ6 A;  1VGX A;  2XCO A;  1TWH K;  3RZO K;  3GTP C;  5DM6 S;  3S17 C;  1KQ4 A;  3FOF A;  1B4B A;  1WQH A;  3AH5 A;  4YFK A;  4BKW A;  2FQT A;  3SZY A;  2D6F C;  3AD8 C;  3NUH A;  4LK0 A;  3TFH A;  3ERE D;  4WJ3 M;  1IBA A;  4WFA S;  4KAW X;  1BDF A;  4GTL A;  3WOD A;  4MQ9 A;  4C3J K;  4BY1 C;  1XXB A;  1BJT A;  3GSI A;  3GTO K;  5IOS A;  1X31 C;  3GTK C;  5C4J C;  5M3M K;  1VJE A;  2YU9 K;  1TWG C;  3H0G A;  3HOU K;  2E2I A;  1ISE A;  1USO A;  5IOR A;  3T00 A;  5C4X K;  2GSO A;  2JA8 K;  4C3H C;  5CHP A;  1I3Q K;  1WOO A;  4GZY A;  1I6V A;  1K83 A;  5C3E K;  3GTQ K;  4KM9 A;  2ZUF A;  2RH6 A;  3LPX A;  4KAS A;  5IP7 K;  1I6H K;  1SMY A;  4BLB A;  4XSZ A;  1F93 A;  2NVX K;  4A3G K;  4G7O A;  3GTJ A;  1DCP A;  1EH1 A;  3GTM A;  2YU9 A;  4GTE A;  3A8I A;  2CFA A;  3EQL A;  3FKI K;  3K7A K;  2KWA A;  1F7U A;  4A3B C;  1JVI A;  1XZQ A;  2A6H A;  3T02 A;  3I4M K;  4X6A K;  3GTG C;  1O29 A;  1ZYR A;  1XXA A;  5JVO A;  2WB1 D;  1I3Q A;  4BXX C;  3HOW K;  4WIL A;  3GTQ A;  3HOV K;  4WFB S;  2NVY C;  3ORE A;  2JA7 A;  2WAQ D;  1TWH C;  3L4K A;  3RZO C;  4XLN A;  1I50 A;  4LOW A;  2A6E A;  3AQP A;  4A3C K;  4QJV B;  5EGH A;  3M3Y K;  4J3N A;  4XCH A;  4A3K K;  2NVX A;  1R9T A;  2E2H A;  3AD9 C;  2JA6 K;  4KN4 A;  1J6W A;  3FKI A;  3QX3 A;  2V6S A;  3DLL S;  4OIP A;  1Y1V A;  3GTL K;  1F9N A;  4LQY A;  1RU0 A;  2ZJR S;  4YFX A;  1BS2 A;  4C3J C;  2NVT K;  2E2J K;  1EQR A;  1VH2 A;  5IP9 K;  4G0V A;  4LR2 A;  3I4N K;  3GTO C;  1INN A;  2YU9 C;  3HOU C;  1JQW A;  4G0W A;  4KMD A;  4DDQ A;  4A3L K;  1XPP A;  5C4X C;  1IE0 A;  2JA8 C;  1WQF A;  4KN7 A;  1I3Q C;  1AB4 A;  4KMA A;  4ZH4 A;  2P5M A;  5C3E C;  3GTQ C;  2BE5 A;  4ILD A;  3OPF A;  2A68 A;  4KM8 A;  5IP7 C;  1I6H C;  4G0U A;  1YX2 A;  1TWA K;  3H0G K;  1F7V A;  2E2I K;  2ZJP S;  1YCL A;  2NVX C;  4A3G C;  1TWF K;  5FLM K;  5M5X K;  4FZB A;  3FKI C;  3K7A C;  4M1X A;  1DCH A;  4BY7 K;  3S2D K;  3S1M K;  4KAT A;  1SFO A;  1K83 K;  3I4M C;  1WOR A;  4X6A C;  4BBR K;  4A93 K;  5FJ8 K;  3HOW C;  1JOE A;  3OEP A;  5HL8 A;  1IQ0 A;  3HOV C;  4G7H A;  3GIR A;  3S14 K;  1O27 A;  4PAA A;  3GTJ K;  1YNJ A;  4QIW D;  3GTM K;  4JK1 A;  5M5W K;  2R7Z A;  4C2M K;  4A3C C;  4XSX A;  2P8T A;  1TWA A;  3M3Y C;  4GTF A;  4A3K C;  2R92 A;  4IOA S;  2L5N A;  3TTG A;  4XLP A;  1IW7 A;  1TWF A;  4O2D A;  2V6T A;  3S0X A;  2JA6 C;  4KAR A;  3ADA C;  4A3M K;  1DD5 A;  2WB1 L;  2PA8 D;  1J98 A;  2JA5 A;  2KXY A;  1TWC A;  3HOX K;  3GTL C;  4YG2 A;  3PIO S;  3AQO A;  2PHC B;  2PPB A;  2WAQ L;  2JA7 K;  5JFE A;  4A3D K;  2ZFZ A;  2NVT C;  3MML B;  2E2J C;  1I50 K;  3S1Q K;  1B4A A;  5IP9 C;  4AH6 A;  4A3E K;  3I4N C;  4GTC A;  1R9T K;  2GSU A;  5IYD K;  2E2H K;  5IYC K;  2CW0 A;  4AYB D;  2O5I A;  2O5J A;  2FQO A;  2B63 A;  1C0A A;  3Q3Q A;  2CFA B;  1Y1V K;  4A3L C;  3M4O K;  2GSN A;  4LK1 A;  1XZQ B;  4G7Z A;  4KMU A;  1ZXO A;  3S1R K;  1USM A;  1WCM A;  4GTA A;  3G4C A;  5HQH A;  3G4A A;  3PIP S;  3RZD K;  1EK8 A;  3HOY K;  3S2H K;  1TWA C;  3H0G C;  3HKZ D;  2E2I C;  1FEU A;  4OIQ A;  5CJ9 A;  1IL2 A;  1TWF C;  5FLM C;  2Y0S D;  2A69 A;  4BY7 C;  4OIR A;  4A3I K;  4WFN S;  3S2D C;  3V4G A;  3S1M C;  3AD7 C;  1K83 C;  2R93 K;  5IOT A;  2VUM A;  4BBR C;  1Y1W A;  5TMC A;  2KPU A;  1VLO A;  4A93 C;  2JH3 A;  4FM9 A;  3GEI A;  5TJ3 A;  3S14 C;  1WOP A;  3TFJ A;  3GTP A;  2V6U A;  3S15 K;  3GTJ C;  4GT9 A;  3GTM C;  1J6V A;  4C2M C;  4Q4Z A;  5IYB K;  2XCQ A;  3S16 K;  1SFO K;  5EGE A;  3PO3 K;  1O25 A;  4A3M C;  4RMF A;  4GFQ A;  3A8J A;  5L46 A;  4A3J K;  2R93 A;  3HOX C;  4BBS K;  4BLA A;  2JA7 C;  4LJZ A;  5JVH S;  4A3D C;  4KB2 A;  4QIW L;  5M5Y K;  1I50 C;  3GTK A;  3S1Q C;  2R7Z K;  4A3E C;  1O24 A;  1TWG A;  4WCE S;  2R92 K;  1R9T C;  5IYD C;  2E2H C;  4OIO A;  5IYC C;  4Y7N K;  1ZVU A;  4KMH A;  2W7V A;  2PA8 L;  2JA5 K;  1XZP A;  1Y1V C;  1TWC K;  3M4O C;  1ZBS A;  4P9S A;  4KDD A;  4A3F K;  3DXJ A;  2ZUE A;  3S1R C;  1EI6 A;  4PAB A;  4NOI A;  2PMZ D;  3A8K A;  2EBB A;  5HL7 S;  3RZD C;  1O26 A;  1O2A A;  4WF9 S;  3HOY C;  4AYB L;  3S2H C;  3H3V D;  4C3I K;  4Y52 K;  2B63 K;  3PO2 K;  1YNN A;  4KB4 A;  3LYW A;  4A3I C;  3HXA A;  3GTG A;  1V5V A;  1PJ7 A;  1G51 A;  3CF5 S;  2R93 C;  3HOZ K;  1WCM K;  3GDZ A;  2RGR A;  4IO9 S;  2GAG C;  2NVY A;  3HKZ L;  1TWH A;  3IPJ A;  2L3U A;  1UV7 A;  3S15 C;  2NVQ K;  5E68 A;  3N0B A;  2Y0S L; 
#chains in the Genus database with same CATH homology
 1TWF C;  4YFK A;  5FLM C;  2Y0S D;  5IYB C;  5C44 K;  2A69 A;  3S16 C;  4A3L K;  1XPP A;  4BY7 C;  4OIR A;  5C4X C;  2JA8 C;  4A3I K;  4LK0 A;  4KN7 A;  1SFO C;  3PO3 C;  3S2D C;  1I3Q C;  2VUM K;  4OIN A;  3S1M C;  1K83 C;  2R93 K;  1Y1W K;  1BDF A;  4ZH4 A;  3WOD A;  4BBR C;  3CQZ K;  5C3E C;  4MQ9 A;  5TMC A;  3GTQ C;  4C3J K;  4BY1 C;  4A3J C;  4A93 C;  3S1N K;  2BE5 A;  4BBS C;  2A68 A;  5IP7 C;  1I6H C;  4Q5S A;  3GTO K;  3GTP K;  3GTK C;  5C4J C;  5M3M K;  3S17 K;  3S14 C;  1TWA K;  3H0G K;  2YU9 K;  3S15 K;  2E2I K;  3GTJ C;  2R7Z C;  2NVX C;  1TWG C;  4A3G C;  3HOU K;  3GTM C;  4C2M C;  1TWF K;  4Q4Z A;  2R92 C;  5FLM K;  5M5X K;  5IYB K;  3FKI C;  3S16 K;  3K7A C;  4BY7 K;  5C4X K;  2JA8 K;  4Y7N C;  4C3H C;  1SFO K;  3PO3 K;  3S2D K;  1I3Q K;  3S1M K;  4GZY A;  1K83 K;  4A3M C;  1I6V A;  5D4D A;  2JA5 C;  3I4M C;  4X6A C;  1TWC C;  4BBR K;  5C3E K;  3GTQ K;  4BY1 K;  4A3J K;  4A93 K;  3HOX C;  4A3F C;  5FJ8 K;  3HOW C;  4BBS K;  4YFN A;  5IP7 K;  2JA7 C;  1I6H K;  4LJZ A;  3HOV C;  1SMY A;  4QJV A;  4A3D C;  3GTK K;  4G7H A;  5C4J K;  3S14 K;  4XSZ A;  4QIW L;  5M5Y K;  1I50 C;  3S1Q C;  3GTJ K;  1YNJ A;  2NVX K;  1TWG K;  2R7Z K;  4A3G K;  4A3E C;  4G7O A;  4QIW D;  3GTM K;  4JK1 A;  5M5W K;  4C2M K;  4A3C C;  4XSX A;  2R92 K;  1R9T C;  5IYD C;  2E2H C;  3M3Y C;  4A3K C;  4OIO A;  3EQL A;  4C3I C;  4Y52 C;  5IYC C;  4XLP A;  3FKI K;  2B63 C;  1IW7 A;  3K7A K;  4MEX A;  3PO2 C;  4A3B C;  4C3H K;  4Y7N K;  2A6H A;  2JA6 C;  2PA8 L;  4A3M K;  2JA5 K;  3I4M K;  2WB1 L;  4X6A K;  1Y1V C;  2PA8 D;  3GTG C;  3M4O C;  1HQM A;  1TWC K;  1ZYR A;  2WB1 D;  5TMF A;  3HOX K;  3GTL C;  4BXX C;  4A3F K;  3DXJ A;  4YG2 A;  3HOZ C;  3HOW K;  1WCM C;  2WAQ L;  3S1R C;  2PPB A;  2PMZ L;  5M3F K;  2JA7 K;  3HOV K;  2NVY C;  4A3D K;  2NVT C;  2WAQ D;  4NOI A;  2PMZ D;  2E2J C;  1I50 K;  3S1Q K;  5IP9 C;  3RZD C;  1TWH C;  4A3E K;  3RZO C;  4XLN A;  2A6E A;  3I4N C;  3H3V L;  4A3C K;  3HOY C;  4QJV B;  4AYB L;  1R9T K;  3S2H C;  5IYD K;  2E2H K;  3H3V D;  3M3Y K;  4A3K K;  2NVQ C;  5IYC K;  4C3I K;  4Y52 K;  2CW0 A;  4AYB D;  2B63 K;  2O5I A;  2O5J A;  3PO2 K;  4A3B K;  4LLG A;  1YNN A;  2JA6 K;  4KN4 A;  5C44 C;  1Y1V K;  4A3L C;  3GTG K;  3M4O K;  4MEY A;  4OIP A;  4A3I C;  4LK1 A;  2VUM C;  3GTL K;  4G7Z A;  2R93 C;  4KMU A;  1Y1W C;  3HOZ K;  4BXX K;  1WCM K;  3S1R K;  3CQZ C;  4YFX A;  3S1N C;  2NVY K;  4C3J C;  2NVT K;  2E2J K;  5IP9 K;  3RZD K;  1TWH K;  3RZO K;  3I4N K;  3GTO C;  3HKZ L;  3GTP C;  3S17 C;  3HOY K;  3S2H K;  1TWA C;  3H0G C;  3HKZ D;  2YU9 C;  2E2I C;  3S15 C;  2NVQ K;  3HOU C;  4OIQ A;  2Y0S L; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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