4A3KC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3kC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3kC01
3GTJK 1WCMC 3S1MK 4AYBL 5M3MK 4A3FK 3S2HK 1I50K 2CW0A 3S16C 4Q4ZA 1Y1WK 2JA8K 3S1NC 2JA6C 3S1RK 3GTKC 1R9TK 2R7ZK 4A3DC 2PA8D 2A6HA 4C3JK 4C2MK 1TWAC 1BDFA 4A3IC 2E2JK 2NVQK 1I3QK 4MEXA 1K83C 2BE5A 3HOUC 3HOZC 2NVTK 5C4JC 4X6AC 4QJVB 2O5IA 4KN7A 2WB1D 1SMYA 4G7HA 3GTQC 3S17K 4A3LC 4XSZA 4A3CC 2JA7K 1TWFC 2NVXC 2JA5K 3S15K 3PO3K 4OIRA 3GTMC 4A3GC 1ZYRA 4QJVA 4XLNA 2R92C 2PMZD 1SFOC 4XLPA 2O5JA 3HOWC 3K7AC 3M3YC 4A3KC 4A3JK 3RZOK 4Y52C 5TMCA 4A3EC 2PA8L 4LLGA 5M5YK 4C3HC 3PO2C 4BY1C 1WCMK 3H0GC 4C3IK 4A3MC 3S16K 5IYDC 2JA6K 3S1NK 3GTKK 2WB1L 1YNJA 4A3DK 3HKZD 3WODA 1IW7A 4A3BC 1TWCC 1TWAK 4A3IK 5C4XC 3S1QC 4BY7C 4GZYA 2NVYC 1K83K 2PMZL 3HOUK 3HOZK 2WAQD 5C4JK 4X6AK 5C44C 3HOVC 3GTQK 4A3LK 4OIOA 3HOXC 4A3CK 1TWFK 4A93C 2NVXK 4A3GK 3DXJA 2Y0SD 2VUMC 3CQZC 5C3EC 2E2HC 1TWHC 2R92K 4Y7NC 1SFOK 1I6HC 3HOWK 3K7AK 3M3YK 4A3KK 2E2IC 4Y52K 1YNNA 1I6VA 3HKZL 4A3EK 4YG2A 3GTLC 4C3HK 3PO2K 4BY1K 3H0GK 3RZDC 3EQLA 5IP9C 4A3MK 1Y1WC 4Q5SA 2WAQL 5IYDK 5M3FK 2R93C 5FLMC 1TWGC 5IYCC 3S14C 4BXXC 4JK1A 5TMFA 4C2MC 4OIQA 4A3BK 3HOYC 1TWCK 4MQ9A 2Y0SL 1Y1VC 5C4XK 3GTOC 3GTGC 3I4MC 5M5XK 2NVYK 3S1QK 4BY7K 4OIPA 4BBSC 2PPBA 5C44K 3HOVK 4ZH4A 3S2DC 4LJZA 4BBRC 3HOXK 1XPPA 4A93K 4XSXA 2YU9C 4G7OA 2B63C 4LK1A 4KN4A 5C3EK 2VUMK 2E2HK 3GTMK 1TWHK 4YFXA 2A68A 4Y7NK 1I6HK 5FJ8K 3RZOC 4LK0A 3I4NC 2E2IK 5IYBC 3GTPC 3M4OC 3H3VD 5IP7C 4C3IC 3GTLK 3FKIC 3GTJC 3S1MC 3RZDK 5IP9K 4A3FC 3S2HC 1I50C 4OINA 4QIWD 2A69A 3S1RC 2JA8C 5FLMK 2R93K 4G7ZA 1R9TC 1TWGK 5IYCK 3S14K 2R7ZC 4YFKA 4BXXK 2A6EA 4C3JC 4MEYA 3HOYK 2E2JC 1HQMA 1Y1VK 2NVQC 3GTGK 1I3QC 4AYBD 3GTOK 3I4MK 4NOIA 4BBSK 2NVTC 5D4DA 3M4OK 3S2DK 4BBRK 3S17C 3H3VL 2JA7C 2YU9K 2JA5C 3S15C 3PO3C 2B63K 4KMUA 3CQZK 4YFNA 5M5WK 4QIWL 3I4NK 4A3JC 5IYBK 3GTPK 5IP7K 3FKIK
chains in the Genus database with same CATH superfamily
3GTJK 1WOSA 1XZPB 3S2HK 1I50K 3G4AA 3S16C 2JA8K 4G0UA 2JA6C 3GTKC 2GSUA 3JSTA 4A3DC 2A6HA 4C3JK 1BDFA 2Y3PA 2YU9A 1BJTA 4KATA 4KM8A 2ZJQS 2W7VA 3CQZA 4IOCS 3GTQC 4XSZA 4A3CC 1TWFC 4ILDA 3GTMC 3N0BA 4DDQA 1IS1A 4LQYA 1SFOC 3OREA 4A3KC 4GTDA 4Y52C 3T02A 1RU0A 2ZUFA 4IO9S 1WCMK 3H0GC 3GDZA 3FOFA 4KAWX 2KPUA 3HXAA 2RH6A 1TWAK 4A3IK 2JA7A 4BY7C 4GZYA 2NVYC 3HOZK 4AH6A 4WF9S 5C4JK 5E68A 5CHPA 1INNA 4WFNS 4WILA 2NVXK 5JVOA 4A3GK 2Y0SD 3CQZC 5C3EC 4GTCA 1KQ4A 3N3YA 3Q3QA 3HOWK 3K7AK 2E2IC 2ZJPS 3GTLC 4C3HK 4BY1K 3RZDC 2R7ZA 4GTLA 5IP9C 4FM9A 4KASA 5JFEA 1ZXOA 2ZUEA 1EI6A 2KXYA 5M3FK 5IYDK 5L46A 5IYCC 4BXXC 4C2MC 4OIQA 2CFAB 4MQ9A 2Y0SL 1Y1VC 3I4MC 4GTFA 1YX2A 1IQ0A 4BBSC 4U67S 2PPBA 1O29A 3HOVK 2CFAA 3S2DC 1DCHA 3L4JA 3SZZA 1F93A 1GE9A 4BLBA 1TWHK 4YFXA 2A68A 4Y7NK 1I6HK 3H3VD 4C3IC 3S1MC 1VJEA 5FLMK 4J3NA 4WCES 1R9TC 1TWGK 4KB2A 2R7ZC 4YFKA 4XCHA 3HOYK 2NVQC 3GTGK 4AYBD 1F7VA 1F7UA 3TFHA 2E2HA 4G0VA 4KMHA 3S17C 3H3VL 5IOQA 2JA5C 3PO3C 1XXAA 2B63K 4BLAA 4A3JC 2R93A 5IYBK 3GTPK 2XCQA 5IP7K 4AYBL 3OPFA 4A3FK 3GTOA 4Q4ZA 3S1NC 1I3QK 1DD5A 4MEXA 1K83C 2NVTK 3S0XA 5HQHA 4X6AC 2O5IA 2WB1D 1SMYA 1IBAA 1V5VA 2GSOA 3FKIA 3GTJA 2R92C 1WOOA 1I50A 2P8TA 4XLPA 5EGHA 2V6UA 3M3YC 4GT9A 4A3EC 1ISEA 3S16K 3BUEA 2JA6K 3GTKK 2WB1L 1YNJA 4A3DK 3HKZD 1XZPA 1PJ5A 1IW7A 1TWCC 3A8IA 5C4XC 1JOEA 4WFAS 4WFBS 1F9NA 3ADAC 5C44C 3NUHA 4KM9A 3GTQK 4KB4A 4A3CK 1TWFK 2VUMC 5JVHS 5DM7S 1WCMA 4FZBA 4KDDA 5IOSA 3LAJA 1SFOK 4A3KK 4Y52K 1I6VA 2L5NA 3HKZL 3H0GK 1TWAA 2XCOA 3AD8C 4JK1A 2NVXA 4BY7K 2NVYK 3TFJA 4ZH4A 4LJZA 4BBRC 2GAGC 2YU9C 4G7OA 2D6FC 5C3EK 1WIHA 1EFWA 4WJ3M 5FJ8K 3I4NC 4LK0A 1WSVA 2E2IK 3M4OC 2V6SA 1IL2A 3GTLK 4IOAS 3RZDK 5DM6S 5IP9K 1ZBSA 1YCLA 4P5AA 2A69A 3S1RC 4G7ZA 5IYCK 4BXXK 5IORA 3GIRA 1G51A 2E2JC 4WJ4A 1Y1VK 3I4MK 4NOIA 4BBSK 1TWHA 1USMA 3AD9C 3LYWA 3S2DK 1J6XA 2JA7C 3S15C 1IE0A 3SZYA 3IPJA 1TWGA 3S1MK 1JQWA 2CW0A 3GTGA 1Y1WK 1B4BA 3BP8C 1R9TK 2R7ZK 3GEEA 1PJ6A 2NVQK 2B63A 3HOUC 1WQHA 3N0CA 4KMDA 4KN7A 1EH1A 4G7HA 3S17K 4A3LC 1XZQB 1O28A 2JA5K 3PO3K 3GTPA 4M1XA 4GTBA 4XLNA 2PMZD 2O5JA 1EQRA 4A3JK 3RZOK 5M5YK 3PO2C 3DLLS 4A3MC 1I3QA 3S1NK 3QX3A 4A3BC 3VA7A 5HL7S 3S1QC 1K83K 2PMZL 1FEUA 3GEHA 2WAQD 3OEPA 4O2DA 4X6AK 1WQGA 2GAHC 1ZQ1C 3HOXC 4A93C 1WQFA 3CAGA 2E2HC 1O2AA 2R92K 5IOTA 3M3YK 5CJ9A 2JA6A 4GTAA 4A3EK 3GTKA 4YG2A 3TFIA 3EQLA 1WSRA 2WAQL 1C0AA 2R93C 1XXBA 3S14C 2V6TA 3AQPA 2KQ1A 3ERED 3GTQA 1TWCK 5C4XK 1TWFA 5M5XK 3GTOC 3L4KA 1EK8A 5C44K 1SFOA 1WORA 1XPPA 2VUMK 4P5BA 3GTMK 3H0GA 4RMFA 1O2BA 2RGRA 2JH3A 5HL8A 3FKIC 3GTJC 1PJ7A 2L3UA 3S2HC 1I50C 4OINA 2JA8C 1ZVUA 2NVYA 2A6EA 4C3JC 1XXCA 5JVGS 3PIOS 1VLOA 3GSIA 1JVIA 4BKWA 4BBRK 2E2IA 4G0WA 2YU9K 3GTLA 2ZJRS 3CQZK 1UV7A 3I4NK 2PHCB 3M4OK 1WCMC 5M3MK 3LAPA 5TJ3A 1Y1VA 3GEIA 3S1RK 3FOEA 3A8KA 3TTGA 2PA8D 3AH5A 1O24A 4C2MK 1TWAC 4A3IC 3CF5S 2E2JK 2KWAA 1B4AA 3HOZC 2BE5A 1X31C 3FHZA 1O25A 5C4JC 4QJVB 4KARA 2JA7K 2NVXC 3LPXA 3S15K 4OIRA 4A3GC 1ZYRA 4QJVA 1L0WA 2ZFZA 3HOWC 1Y1WA 3K7AC 5TMCA 3T00A 1R9TA 2PA8L 4LLGA 4C3HC 4BY1C 4C3IK 2GSNA 4GFQA 2EBBA 5IYDC 3WODA 4C45A 2JA5A 4PABA 5EGEA 1DCPA 3HOUK 1O26A 4LR2A 3HOVC 1USOA 4A3LK 4OIOA 2FQTA 3DXJA 3BP3A 1J98A 1TWHC 1WOPA 4Y7NC 1I6HC 1XZQA 1YNNA 1AB4A 3PO2K 2XCRB 4A3MK 1Y1WC 4Q5SA 1K83A 5FLMC 1BS2A 1TWGC 3AD7C 2P5MA 1VRQC 5TMFA 3V4GA 4A3BK 3HOYC 3S1QK 3GTGC 4OIPA 1VGXA 2R92A 4KC6A 4P9SA 3HOXK 4A93K 4XSXA 2B63C 4LK1A 4KN4A 3G4CA 2E2HK 3RZOC 5IYBC 3GTPC 1HI9A 1J6WA 5IP7C 3PIPS 1O27A 4A3FC 1TWCA 4GTEA 4LOWA 1DCOA 4PAAA 4QIWD 2R93K 3AQOA 3S14K 4MEYA 1HQMA 3T01A 3GTOK 1I3QC 2VUMA 1VH2A 2NVTC 3GTMA 5D4DA 1O2FB 4KMUA 3A8JA 1J6VA 4YFNA 5M5WK 4QIWL 2FQOA 4KMAA 1BGWA 3MMLB 3FKIK
chains in the Genus database with same CATH topology
3GTJK 1WCMC 3S1MK 4AYBL 5M3MK 4A3FK 3S2HK 1I50K 2CW0A 3S16C 4Q4ZA 1Y1WK 2JA8K 3S1NC 2JA6C 3S1RK 3GTKC 1R9TK 2R7ZK 4A3DC 2PA8D 2A6HA 4C3JK 4C2MK 1TWAC 1BDFA 4A3IC 2E2JK 2NVQK 1I3QK 4MEXA 1K83C 2BE5A 3HOUC 3HOZC 2NVTK 5C4JC 4X6AC 4QJVB 2O5IA 4KN7A 2WB1D 1SMYA 4G7HA 3GTQC 3S17K 4A3LC 4XSZA 4A3CC 2JA7K 1TWFC 2NVXC 2JA5K 3S15K 3PO3K 4OIRA 3GTMC 4A3GC 1ZYRA 4QJVA 4XLNA 2R92C 2PMZD 1SFOC 4XLPA 2O5JA 3HOWC 3K7AC 3M3YC 4A3KC 4A3JK 3RZOK 4Y52C 5TMCA 4A3EC 2PA8L 4LLGA 5M5YK 4C3HC 3PO2C 4BY1C 1WCMK 3H0GC 4C3IK 4A3MC 3S16K 5IYDC 2JA6K 3S1NK 3GTKK 2WB1L 1YNJA 4A3DK 3HKZD 3WODA 1IW7A 4A3BC 1TWCC 1TWAK 4A3IK 5C4XC 3S1QC 4BY7C 4GZYA 2NVYC 1K83K 2PMZL 3HOUK 3HOZK 2WAQD 5C4JK 4X6AK 5C44C 3HOVC 3GTQK 4A3LK 4OIOA 3HOXC 4A3CK 1TWFK 4A93C 2NVXK 4A3GK 3DXJA 2Y0SD 2VUMC 3CQZC 5C3EC 2E2HC 1TWHC 2R92K 4Y7NC 1SFOK 1I6HC 3HOWK 3K7AK 3M3YK 4A3KK 2E2IC 4Y52K 1YNNA 1I6VA 3HKZL 4A3EK 4YG2A 3GTLC 4C3HK 3PO2K 4BY1K 3H0GK 3RZDC 3EQLA 5IP9C 4A3MK 1Y1WC 4Q5SA 2WAQL 5IYDK 5M3FK 2R93C 5FLMC 1TWGC 5IYCC 3S14C 4BXXC 4JK1A 5TMFA 4C2MC 4OIQA 4A3BK 3HOYC 1TWCK 4MQ9A 2Y0SL 1Y1VC 5C4XK 3GTOC 3GTGC 3I4MC 5M5XK 2NVYK 3S1QK 4BY7K 4OIPA 4BBSC 2PPBA 5C44K 3HOVK 4ZH4A 3S2DC 4LJZA 4BBRC 3HOXK 1XPPA 4A93K 4XSXA 2YU9C 4G7OA 2B63C 4LK1A 4KN4A 5C3EK 2VUMK 2E2HK 3GTMK 1TWHK 4YFXA 2A68A 4Y7NK 1I6HK 5FJ8K 3RZOC 4LK0A 3I4NC 2E2IK 5IYBC 3GTPC 3M4OC 3H3VD 5IP7C 4C3IC 3GTLK 3FKIC 3GTJC 3S1MC 3RZDK 5IP9K 4A3FC 3S2HC 1I50C 4OINA 4QIWD 2A69A 3S1RC 2JA8C 5FLMK 2R93K 4G7ZA 1R9TC 1TWGK 5IYCK 3S14K 2R7ZC 4YFKA 4BXXK 2A6EA 4C3JC 4MEYA 3HOYK 2E2JC 1HQMA 1Y1VK 2NVQC 3GTGK 1I3QC 4AYBD 3GTOK 3I4MK 4NOIA 4BBSK 2NVTC 5D4DA 3M4OK 3S2DK 4BBRK 3S17C 3H3VL 2JA7C 2YU9K 2JA5C 3S15C 3PO3C 2B63K 4KMUA 3CQZK 4YFNA 5M5WK 4QIWL 3I4NK 4A3JC 5IYBK 3GTPK 5IP7K 3FKIK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTJ K;  1WCM C;  3S1M K;  4AYB L;  5M3M K;  4A3F K;  3S2H K;  1I50 K;  2CW0 A;  3S16 C;  4Q4Z A;  1Y1W K;  2JA8 K;  3S1N C;  2JA6 C;  3S1R K;  3GTK C;  1R9T K;  2R7Z K;  4A3D C;  2PA8 D;  2A6H A;  4C3J K;  4C2M K;  1TWA C;  1BDF A;  4A3I C;  2E2J K;  2NVQ K;  1I3Q K;  4MEX A;  1K83 C;  2BE5 A;  3HOU C;  3HOZ C;  2NVT K;  5C4J C;  4X6A C;  4QJV B;  2O5I A;  4KN7 A;  2WB1 D;  1SMY A;  4G7H A;  3GTQ C;  3S17 K;  4A3L C;  4XSZ A;  4A3C C;  2JA7 K;  1TWF C;  2NVX C;  2JA5 K;  3S15 K;  3PO3 K;  4OIR A;  3GTM C;  4A3G C;  1ZYR A;  4QJV A;  4XLN A;  2R92 C;  2PMZ D;  1SFO C;  4XLP A;  2O5J A;  3HOW C;  3K7A C;  3M3Y C;  4A3K C;  4A3J K;  3RZO K;  4Y52 C;  5TMC A;  4A3E C;  2PA8 L;  4LLG A;  5M5Y K;  4C3H C;  3PO2 C;  4BY1 C;  1WCM K;  3H0G C;  4C3I K;  4A3M C;  3S16 K;  5IYD C;  2JA6 K;  3S1N K;  3GTK K;  2WB1 L;  1YNJ A;  4A3D K;  3HKZ D;  3WOD A;  1IW7 A;  4A3B C;  1TWC C;  1TWA K;  4A3I K;  5C4X C;  3S1Q C;  4BY7 C;  4GZY A;  2NVY C;  1K83 K;  2PMZ L;  3HOU K;  3HOZ K;  2WAQ D;  5C4J K;  4X6A K;  5C44 C;  3HOV C;  3GTQ K;  4A3L K;  4OIO A;  3HOX C;  4A3C K;  1TWF K;  4A93 C;  2NVX K;  4A3G K;  3DXJ A;  2Y0S D;  2VUM C;  3CQZ C;  5C3E C;  2E2H C;  1TWH C;  2R92 K;  4Y7N C;  1SFO K;  1I6H C;  3HOW K;  3K7A K;  3M3Y K;  4A3K K;  2E2I C;  4Y52 K;  1YNN A;  1I6V A;  3HKZ L;  4A3E K;  4YG2 A;  3GTL C;  4C3H K;  3PO2 K;  4BY1 K;  3H0G K;  3RZD C;  3EQL A;  5IP9 C;  4A3M K;  1Y1W C;  4Q5S A;  2WAQ L;  5IYD K;  5M3F K;  2R93 C;  5FLM C;  1TWG C;  5IYC C;  3S14 C;  4BXX C;  4JK1 A;  5TMF A;  4C2M C;  4OIQ A;  4A3B K;  3HOY C;  1TWC K;  4MQ9 A;  2Y0S L;  1Y1V C;  5C4X K;  3GTO C;  3GTG C;  3I4M C;  5M5X K;  2NVY K;  3S1Q K;  4BY7 K;  4OIP A;  4BBS C;  2PPB A;  5C44 K;  3HOV K;  4ZH4 A;  3S2D C;  4LJZ A;  4BBR C;  3HOX K;  1XPP A;  4A93 K;  4XSX A;  2YU9 C;  4G7O A;  2B63 C;  4LK1 A;  4KN4 A;  5C3E K;  2VUM K;  2E2H K;  3GTM K;  1TWH K;  4YFX A;  2A68 A;  4Y7N K;  1I6H K;  5FJ8 K;  3RZO C;  4LK0 A;  3I4N C;  2E2I K;  5IYB C;  3GTP C;  3M4O C;  3H3V D;  5IP7 C;  4C3I C;  3GTL K;  3FKI C;  3GTJ C;  3S1M C;  3RZD K;  5IP9 K;  4A3F C;  3S2H C;  1I50 C;  4OIN A;  4QIW D;  2A69 A;  3S1R C;  2JA8 C;  5FLM K;  2R93 K;  4G7Z A;  1R9T C;  1TWG K;  5IYC K;  3S14 K;  2R7Z C;  4YFK A;  4BXX K;  2A6E A;  4C3J C;  4MEY A;  3HOY K;  2E2J C;  1HQM A;  1Y1V K;  2NVQ C;  3GTG K;  1I3Q C;  4AYB D;  3GTO K;  3I4M K;  4NOI A;  4BBS K;  2NVT C;  5D4D A;  3M4O K;  3S2D K;  4BBR K;  3S17 C;  3H3V L;  2JA7 C;  2YU9 K;  2JA5 C;  3S15 C;  3PO3 C;  2B63 K;  4KMU A;  3CQZ K;  4YFN A;  5M5W K;  4QIW L;  3I4N K;  4A3J C;  5IYB K;  3GTP K;  5IP7 K;  3FKI K; 
#chains in the Genus database with same CATH topology
 3GTJ K;  1WOS A;  1XZP B;  3S2H K;  1I50 K;  3G4A A;  3S16 C;  2JA8 K;  4G0U A;  2JA6 C;  3GTK C;  2GSU A;  3JST A;  4A3D C;  2A6H A;  4C3J K;  1BDF A;  2Y3P A;  2YU9 A;  1BJT A;  4KAT A;  4KM8 A;  2ZJQ S;  2W7V A;  3CQZ A;  4IOC S;  3GTQ C;  4XSZ A;  4A3C C;  1TWF C;  4ILD A;  3GTM C;  3N0B A;  4DDQ A;  1IS1 A;  4LQY A;  1SFO C;  3ORE A;  4A3K C;  4GTD A;  4Y52 C;  3T02 A;  1RU0 A;  2ZUF A;  4IO9 S;  1WCM K;  3H0G C;  3GDZ A;  3FOF A;  4KAW X;  2KPU A;  3HXA A;  2RH6 A;  1TWA K;  4A3I K;  2JA7 A;  4BY7 C;  4GZY A;  2NVY C;  3HOZ K;  4AH6 A;  4WF9 S;  5C4J K;  5E68 A;  5CHP A;  1INN A;  4WFN S;  4WIL A;  2NVX K;  5JVO A;  4A3G K;  2Y0S D;  3CQZ C;  5C3E C;  4GTC A;  1KQ4 A;  3N3Y A;  3Q3Q A;  3HOW K;  3K7A K;  2E2I C;  2ZJP S;  3GTL C;  4C3H K;  4BY1 K;  3RZD C;  2R7Z A;  4GTL A;  5IP9 C;  4FM9 A;  4KAS A;  5JFE A;  1ZXO A;  2ZUE A;  1EI6 A;  2KXY A;  5M3F K;  5IYD K;  5L46 A;  5IYC C;  4BXX C;  4C2M C;  4OIQ A;  2CFA B;  4MQ9 A;  2Y0S L;  1Y1V C;  3I4M C;  4GTF A;  1YX2 A;  1IQ0 A;  4BBS C;  4U67 S;  2PPB A;  1O29 A;  3HOV K;  2CFA A;  3S2D C;  1DCH A;  3L4J A;  3SZZ A;  1F93 A;  1GE9 A;  4BLB A;  1TWH K;  4YFX A;  2A68 A;  4Y7N K;  1I6H K;  3H3V D;  4C3I C;  3S1M C;  1VJE A;  5FLM K;  4J3N A;  4WCE S;  1R9T C;  1TWG K;  4KB2 A;  2R7Z C;  4YFK A;  4XCH A;  3HOY K;  2NVQ C;  3GTG K;  4AYB D;  1F7V A;  1F7U A;  3TFH A;  2E2H A;  4G0V A;  4KMH A;  3S17 C;  3H3V L;  5IOQ A;  2JA5 C;  3PO3 C;  1XXA A;  2B63 K;  4BLA A;  4A3J C;  2R93 A;  5IYB K;  3GTP K;  2XCQ A;  5IP7 K;  4AYB L;  3OPF A;  4A3F K;  3GTO A;  4Q4Z A;  3S1N C;  1I3Q K;  1DD5 A;  4MEX A;  1K83 C;  2NVT K;  3S0X A;  5HQH A;  4X6A C;  2O5I A;  2WB1 D;  1SMY A;  1IBA A;  1V5V A;  2GSO A;  3FKI A;  3GTJ A;  2R92 C;  1WOO A;  1I50 A;  2P8T A;  4XLP A;  5EGH A;  2V6U A;  3M3Y C;  4GT9 A;  4A3E C;  1ISE A;  3S16 K;  3BUE A;  2JA6 K;  3GTK K;  2WB1 L;  1YNJ A;  4A3D K;  3HKZ D;  1XZP A;  1PJ5 A;  1IW7 A;  1TWC C;  3A8I A;  5C4X C;  1JOE A;  4WFA S;  4WFB S;  1F9N A;  3ADA C;  5C44 C;  3NUH A;  4KM9 A;  3GTQ K;  4KB4 A;  4A3C K;  1TWF K;  2VUM C;  5JVH S;  5DM7 S;  1WCM A;  4FZB A;  4KDD A;  5IOS A;  3LAJ A;  1SFO K;  4A3K K;  4Y52 K;  1I6V A;  2L5N A;  3HKZ L;  3H0G K;  1TWA A;  2XCO A;  3AD8 C;  4JK1 A;  2NVX A;  4BY7 K;  2NVY K;  3TFJ A;  4ZH4 A;  4LJZ A;  4BBR C;  2GAG C;  2YU9 C;  4G7O A;  2D6F C;  5C3E K;  1WIH A;  1EFW A;  4WJ3 M;  5FJ8 K;  3I4N C;  4LK0 A;  1WSV A;  2E2I K;  3M4O C;  2V6S A;  1IL2 A;  3GTL K;  4IOA S;  3RZD K;  5DM6 S;  5IP9 K;  1ZBS A;  1YCL A;  4P5A A;  2A69 A;  3S1R C;  4G7Z A;  5IYC K;  4BXX K;  5IOR A;  3GIR A;  1G51 A;  2E2J C;  4WJ4 A;  1Y1V K;  3I4M K;  4NOI A;  4BBS K;  1TWH A;  1USM A;  3AD9 C;  3LYW A;  3S2D K;  1J6X A;  2JA7 C;  3S15 C;  1IE0 A;  3SZY A;  3IPJ A;  1TWG A;  3S1M K;  1JQW A;  2CW0 A;  3GTG A;  1Y1W K;  1B4B A;  3BP8 C;  1R9T K;  2R7Z K;  3GEE A;  1PJ6 A;  2NVQ K;  2B63 A;  3HOU C;  1WQH A;  3N0C A;  4KMD A;  4KN7 A;  1EH1 A;  4G7H A;  3S17 K;  4A3L C;  1XZQ B;  1O28 A;  2JA5 K;  3PO3 K;  3GTP A;  4M1X A;  4GTB A;  4XLN A;  2PMZ D;  2O5J A;  1EQR A;  4A3J K;  3RZO K;  5M5Y K;  3PO2 C;  3DLL S;  4A3M C;  1I3Q A;  3S1N K;  3QX3 A;  4A3B C;  3VA7 A;  5HL7 S;  3S1Q C;  1K83 K;  2PMZ L;  1FEU A;  3GEH A;  2WAQ D;  3OEP A;  4O2D A;  4X6A K;  1WQG A;  2GAH C;  1ZQ1 C;  3HOX C;  4A93 C;  1WQF A;  3CAG A;  2E2H C;  1O2A A;  2R92 K;  5IOT A;  3M3Y K;  5CJ9 A;  2JA6 A;  4GTA A;  4A3E K;  3GTK A;  4YG2 A;  3TFI A;  3EQL A;  1WSR A;  2WAQ L;  1C0A A;  2R93 C;  1XXB A;  3S14 C;  2V6T A;  3AQP A;  2KQ1 A;  3ERE D;  3GTQ A;  1TWC K;  5C4X K;  1TWF A;  5M5X K;  3GTO C;  3L4K A;  1EK8 A;  5C44 K;  1SFO A;  1WOR A;  1XPP A;  2VUM K;  4P5B A;  3GTM K;  3H0G A;  4RMF A;  1O2B A;  2RGR A;  2JH3 A;  5HL8 A;  3FKI C;  3GTJ C;  1PJ7 A;  2L3U A;  3S2H C;  1I50 C;  4OIN A;  2JA8 C;  1ZVU A;  2NVY A;  2A6E A;  4C3J C;  1XXC A;  5JVG S;  3PIO S;  1VLO A;  3GSI A;  1JVI A;  4BKW A;  4BBR K;  2E2I A;  4G0W A;  2YU9 K;  3GTL A;  2ZJR S;  3CQZ K;  1UV7 A;  3I4N K;  2PHC B;  3M4O K;  1WCM C;  5M3M K;  3LAP A;  5TJ3 A;  1Y1V A;  3GEI A;  3S1R K;  3FOE A;  3A8K A;  3TTG A;  2PA8 D;  3AH5 A;  1O24 A;  4C2M K;  1TWA C;  4A3I C;  3CF5 S;  2E2J K;  2KWA A;  1B4A A;  3HOZ C;  2BE5 A;  1X31 C;  3FHZ A;  1O25 A;  5C4J C;  4QJV B;  4KAR A;  2JA7 K;  2NVX C;  3LPX A;  3S15 K;  4OIR A;  4A3G C;  1ZYR A;  4QJV A;  1L0W A;  2ZFZ A;  3HOW C;  1Y1W A;  3K7A C;  5TMC A;  3T00 A;  1R9T A;  2PA8 L;  4LLG A;  4C3H C;  4BY1 C;  4C3I K;  2GSN A;  4GFQ A;  2EBB A;  5IYD C;  3WOD A;  4C45 A;  2JA5 A;  4PAB A;  5EGE A;  1DCP A;  3HOU K;  1O26 A;  4LR2 A;  3HOV C;  1USO A;  4A3L K;  4OIO A;  2FQT A;  3DXJ A;  3BP3 A;  1J98 A;  1TWH C;  1WOP A;  4Y7N C;  1I6H C;  1XZQ A;  1YNN A;  1AB4 A;  3PO2 K;  2XCR B;  4A3M K;  1Y1W C;  4Q5S A;  1K83 A;  5FLM C;  1BS2 A;  1TWG C;  3AD7 C;  2P5M A;  1VRQ C;  5TMF A;  3V4G A;  4A3B K;  3HOY C;  3S1Q K;  3GTG C;  4OIP A;  1VGX A;  2R92 A;  4KC6 A;  4P9S A;  3HOX K;  4A93 K;  4XSX A;  2B63 C;  4LK1 A;  4KN4 A;  3G4C A;  2E2H K;  3RZO C;  5IYB C;  3GTP C;  1HI9 A;  1J6W A;  5IP7 C;  3PIP S;  1O27 A;  4A3F C;  1TWC A;  4GTE A;  4LOW A;  1DCO A;  4PAA A;  4QIW D;  2R93 K;  3AQO A;  3S14 K;  4MEY A;  1HQM A;  3T01 A;  3GTO K;  1I3Q C;  2VUM A;  1VH2 A;  2NVT C;  3GTM A;  5D4D A;  1O2F B;  4KMU A;  3A8J A;  1J6V A;  4YFN A;  5M5W K;  4QIW L;  2FQO A;  4KMA A;  1BGW A;  3MML B;  3FKI K; 
#chains in the Genus database with same CATH homology
 3GTJ K;  1WCM C;  3S1M K;  4AYB L;  5M3M K;  4A3F K;  3S2H K;  1I50 K;  2CW0 A;  3S16 C;  4Q4Z A;  1Y1W K;  2JA8 K;  3S1N C;  2JA6 C;  3S1R K;  3GTK C;  1R9T K;  2R7Z K;  4A3D C;  2PA8 D;  2A6H A;  4C3J K;  4C2M K;  1TWA C;  1BDF A;  4A3I C;  2E2J K;  2NVQ K;  1I3Q K;  4MEX A;  1K83 C;  2BE5 A;  3HOU C;  3HOZ C;  2NVT K;  5C4J C;  4X6A C;  4QJV B;  2O5I A;  4KN7 A;  2WB1 D;  1SMY A;  4G7H A;  3GTQ C;  3S17 K;  4A3L C;  4XSZ A;  4A3C C;  2JA7 K;  1TWF C;  2NVX C;  2JA5 K;  3S15 K;  3PO3 K;  4OIR A;  3GTM C;  4A3G C;  1ZYR A;  4QJV A;  4XLN A;  2R92 C;  2PMZ D;  1SFO C;  4XLP A;  2O5J A;  3HOW C;  3K7A C;  3M3Y C;  4A3K C;  4A3J K;  3RZO K;  4Y52 C;  5TMC A;  4A3E C;  2PA8 L;  4LLG A;  5M5Y K;  4C3H C;  3PO2 C;  4BY1 C;  1WCM K;  3H0G C;  4C3I K;  4A3M C;  3S16 K;  5IYD C;  2JA6 K;  3S1N K;  3GTK K;  2WB1 L;  1YNJ A;  4A3D K;  3HKZ D;  3WOD A;  1IW7 A;  4A3B C;  1TWC C;  1TWA K;  4A3I K;  5C4X C;  3S1Q C;  4BY7 C;  4GZY A;  2NVY C;  1K83 K;  2PMZ L;  3HOU K;  3HOZ K;  2WAQ D;  5C4J K;  4X6A K;  5C44 C;  3HOV C;  3GTQ K;  4A3L K;  4OIO A;  3HOX C;  4A3C K;  1TWF K;  4A93 C;  2NVX K;  4A3G K;  3DXJ A;  2Y0S D;  2VUM C;  3CQZ C;  5C3E C;  2E2H C;  1TWH C;  2R92 K;  4Y7N C;  1SFO K;  1I6H C;  3HOW K;  3K7A K;  3M3Y K;  4A3K K;  2E2I C;  4Y52 K;  1YNN A;  1I6V A;  3HKZ L;  4A3E K;  4YG2 A;  3GTL C;  4C3H K;  3PO2 K;  4BY1 K;  3H0G K;  3RZD C;  3EQL A;  5IP9 C;  4A3M K;  1Y1W C;  4Q5S A;  2WAQ L;  5IYD K;  5M3F K;  2R93 C;  5FLM C;  1TWG C;  5IYC C;  3S14 C;  4BXX C;  4JK1 A;  5TMF A;  4C2M C;  4OIQ A;  4A3B K;  3HOY C;  1TWC K;  4MQ9 A;  2Y0S L;  1Y1V C;  5C4X K;  3GTO C;  3GTG C;  3I4M C;  5M5X K;  2NVY K;  3S1Q K;  4BY7 K;  4OIP A;  4BBS C;  2PPB A;  5C44 K;  3HOV K;  4ZH4 A;  3S2D C;  4LJZ A;  4BBR C;  3HOX K;  1XPP A;  4A93 K;  4XSX A;  2YU9 C;  4G7O A;  2B63 C;  4LK1 A;  4KN4 A;  5C3E K;  2VUM K;  2E2H K;  3GTM K;  1TWH K;  4YFX A;  2A68 A;  4Y7N K;  1I6H K;  5FJ8 K;  3RZO C;  4LK0 A;  3I4N C;  2E2I K;  5IYB C;  3GTP C;  3M4O C;  3H3V D;  5IP7 C;  4C3I C;  3GTL K;  3FKI C;  3GTJ C;  3S1M C;  3RZD K;  5IP9 K;  4A3F C;  3S2H C;  1I50 C;  4OIN A;  4QIW D;  2A69 A;  3S1R C;  2JA8 C;  5FLM K;  2R93 K;  4G7Z A;  1R9T C;  1TWG K;  5IYC K;  3S14 K;  2R7Z C;  4YFK A;  4BXX K;  2A6E A;  4C3J C;  4MEY A;  3HOY K;  2E2J C;  1HQM A;  1Y1V K;  2NVQ C;  3GTG K;  1I3Q C;  4AYB D;  3GTO K;  3I4M K;  4NOI A;  4BBS K;  2NVT C;  5D4D A;  3M4O K;  3S2D K;  4BBR K;  3S17 C;  3H3V L;  2JA7 C;  2YU9 K;  2JA5 C;  3S15 C;  3PO3 C;  2B63 K;  4KMU A;  3CQZ K;  4YFN A;  5M5W K;  4QIW L;  3I4N K;  4A3J C;  5IYB K;  3GTP K;  5IP7 K;  3FKI K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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