4A3KC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3kC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3kC01
4BBSK 2JA8C 3I4NC 3HOUC 3CQZK 3GTOC 3M4OK 4LK1A 5C3EK 2JA8K 3I4NK 4OINA 2R7ZK 2BE5A 4XLNA 5TMFA 4C3IC 2YU9K 3HOYK 5M5XK 1TWGC 3S17K 5M5YK 3K7AC 4C2MC 1IW7A 2PPBA 4A3CC 1Y1WC 5C4XC 1I50K 1TWGK 4A3KK 1ZYRA 3GTGK 4Q5SA 4BY1K 4A3CK 3S14C 1Y1WK 4MEXA 4X6AC 1I6VA 3S1RC 4C3JK 1R9TC 3H0GK 3S14K 4YFNA 4LK0A 4A3GK 4A3FC 4A3LC 3GTJC 3RZOK 2A68A 5IP7C 2JA6K 4A3FK 3S1NC 5D4DA 5IP7K 5M5WK 3S1QC 3CQZC 3M4OC 2JA5K 3S1NK 4XSXA 1TWFK 5C3EC 2R7ZC 1TWAC 1I6HC 4Q4ZA 5TMCA 5IYDK 3PO3K 1TWAK 1I6HK 2YU9C 4OIRA 3HOYC 3GTMK 3S17C 4QIWD 4G7ZA 1Y1VC 3GTGC 1I50C 2WB1D 4A3MC 2NVXC 4A3KC 1Y1VK 3HOVK 4BY1C 2VUMC 4Y52K 4A3MK 2NVXK 3HKZD 2WAQD 4C3JC 2VUMK 3H0GC 5C4JC 5FJ8K 3PO2K 4A3GC 4A3BK 2PA8D 4AYBD 3RZOC 5C4JK 3HOXC 4BXXK 2R93K 2JA6C 3DXJA 2E2HK 4QIWL 5M3FK 3HOXK 4KN7A 3S16C 1XPPA 2JA5C 2WB1L 2Y0SD 2R92K 3HOWK 4OIQA 4OIOA 2B63K 3I4MK 1TWFC 4C3HK 5FLMK 2PMZD 3S16K 4A3EC 5C44K 1TWHC 2WAQL 1YNJA 3WODA 4JK1A 5IP9C 3HKZL 4A3EK 1TWCC 5IYDC 2E2JC 3PO3C 1TWHK 2NVTK 2PA8L 4AYBL 5IP9K 4QJVB 4MEYA 3GTMC 1TWCK 2E2JK 2CW0A 3GTKC 1WCMK 4NOIA 1I3QC 3GTKK 3HOVC 2Y0SL 4Y52C 4YG2A 2NVQC 1HQMA 3FKIK 1I3QK 3EQLA 4KMUA 2PMZL 2E2IK 4A3DC 3S2DC 2JA7K 2NVQK 3S2HC 4G7HA 3PO2C 4A3BC 4A3DK 3S2DK 2R93C 4BXXC 3H3VD 3S2HK 3S1MC 1K83K 2E2HC 3M3YK 2A6EA 3RZDC 3GTLK 5IYCC 3S1MK 3HOWC 2R92C 4A3JK 2B63C 3I4MC 5FLMC 4C3HC 4G7OA 5IYCK 3RZDK 3GTQK 4XSZA 4MQ9A 5C44C 4LLGA 2O5IA 3HOUK 3GTOK 4OIPA 2NVTC 4KN4A 5M3MK 4BBRC 1SFOC 3H3VL 1WCMC 4C3IK 4BBRK 1SFOK 4LJZA 2A6HA 1YNNA 3FKIC 4YFKA 5IYBC 4Y7NC 2E2IC 2JA7C 3K7AK 4C2MK 5C4XK 3HOZC 2O5JA 4A93C 5IYBK 4Y7NK 4GZYA 2NVYC 4ZH4A 4A3IC 3HOZK 4A93K 4X6AK 4YFXA 3S1RK 1K83C 3M3YC 2NVYK 4QJVA 3S15C 4A3IK 1R9TK 3GTLC 4A3LK 1SMYA 3GTPC 3GTJK 1BDFA 2A69A 4A3JC 4BY7C 3S15K 4XLPA 4BBSC 3GTPK 3GTQC 4BY7K 3S1QK
chains in the Genus database with same CATH superfamily
3CQZK 3TTGA 3GTQA 4LK1A 1KQ4A 2D6FC 2R7ZK 3N3YA 3HOYK 1TWGC 1WQFA 5IOSA 3S0XA 3K7AC 4C2MC 1TWGK 1IE0A 4KM9A 4IOCS 3S1RC 1XZQB 2XCQA 4LK0A 1EFWA 4IOAS 1J6VA 2Y3PA 5CHPA 3N0CA 3QX3A 5M5WK 3M4OC 3FOEA 3AQOA 3G4AA 5HQHA 4KB4A 2XCOA 3PO3K 1Y1VC 1XXBA 1Y1VK 3GTGA 3H0GC 5C4JC 3L4JA 3PIPS 3PO2K 4AYBD 5C4JK 5JFEA 1JQWA 2FQTA 4GTLA 3DXJA 2E2HK 1XPPA 2JA5C 3HOWK 2Y0SD 2R92K 4OIOA 2B63K 4IO9S 1EK8A 4C3HK 1PJ7A 1TWHC 3HKZL 1O2FB 1TWHK 1DCOA 1USOA 3Q3QA 3TFIA 3GTMA 3GEEA 4NOIA 1I3QC 2GSOA 1RU0A 4Y52C 1HQMA 3FKIK 1I3QK 3EQLA 2E2IK 4A3DC 4G7HA 4A3BC 4A3DK 2R93C 3S1MC 1K83K 4LR2A 3T00A 1YX2A 3S1MK 4A3JK 4O2DA 3GTQK 4MQ9A 4LLGA 3FHZA 4XCHA 2W7VA 4KC6A 2NVTC 2GSUA 4BBRC 4BBRK 1ZQ1C 3A8IA 1IBAA 1DD5A 5IYBC 5C4XK 4A93C 2JA7A 5IYBK 4GZYA 4A3IC 2P5MA 4A93K 1O2AA 3M3YC 4A3IK 3GTLC 4A3LK 1GE9A 4BY7C 1VJEA 4GT9A 4BY7K 3HOUC 2PHCB 3JSTA 3GTOA 2BE5A 3TFJA 3CAGA 4XLNA 1ZBSA 5M5XK 3S17K 1SFOA 1X31C 3GTGK 2P8TA 4A3KK 1ZYRA 1IS1A 1O26A 5IORA 3S14C 4KAWX 4MEXA 4X6AC 3S14K 1XZPB 2FQOA 3GTJC 3RZOK 2A68A 5IP7C 2RH6A 5IP7K 2V6SA 3S1QC 3CQZC 2R7ZC 5TMCA 3BP8C 1O27A 1WOOA 4WFAS 3HOYC 2CFAB 3GTMK 4G7ZA 2YU9A 3ADAC 1VRQC 3HOVK 2KPUA 1I50A 3BP3A 3LAJA 3HKZD 3HXAA 4GTFA 4WFBS 5JVGS 4BXXK 2KWAA 4G0WA 4QIWL 1WORA 4KN7A 5EGEA 2JA6A 2WB1L 3GDZA 4OIQA 3I4MK 1G51A 4A3EC 1TWFA 1YNJA 2WAQL 4A3EK 4WFNS 3PO3C 2PA8L 4QJVB 4PABA 3A8KA 2NVQC 2JA7K 2PMZL 1O24A 3N0BA 3OEPA 2NVQK 5HL8A 2NVXA 3PO2C 4GFQA 3VA7A 1BJTA 3LPXA 1INNA 2E2HC 3RZDC 1B4AA 5IYCC 3HOWC 2R92C 2B63C 1WQGA 3RZDK 4C3HC 4G7OA 5IYCK 5IOTA 4LOWA 2O5IA 4FZBA 3GTOK 4KASA 4OIPA 4KN4A 2EBBA 3FOFA 4KMHA 3H3VL 1SFOC 1TWCA 4C3IK 1VH2A 1SFOK 1WCMA 3FKIC 2E2IC 3GTKA 4WF9S 1XXAA 3SZYA 4GTBA 3T01A 4G0VA 1EQRA 4YFXA 5JVHS 1K83C 1R9TK 1SMYA 3OREA 4A3JC 4XLPA 4BBSC 3GTQC 4BBSK 2JA8C 5C3EK 2JA8K 4OINA 2ZJRS 2ZUEA 1USMA 2YU9K 2ZFZA 5JVOA 1DCPA 5M5YK 4A3CC 2PPBA 1IW7A 3T02A 1I50K 5C4XC 2ZUFA 3IPJA 4Q5SA 3OPFA 4BY1K 4A3CK 1I6VA 4C3JK 4BLAA 1J98A 4A3GK 4A3LC 1XXCA 3NUHA 1ZVUA 5E68A 3A8JA 2JA6K 1J6XA 3AH5A 1BGWA 4KB2A 4LQYA 1JOEA 1TWFK 3DLLS 3AD7C 1J6WA 5IYDK 3S17C 4QIWD 3GTGC 2WB1D 1O25A 2NVXC 1ZXOA 4A3KC 2V6TA 2NVXK 1O2BA 2WAQD 2KQ1A 1Y1WA 4ILDA 2PA8D 3RZOC 3H0GA 2L5NA 2GSNA 4BLBA 2GAGC 4WCES 4RMFA 1O29A 1R9TA 5FLMK 2PMZD 2JA5A 5C44K 1F9NA 4JK1A 5IP9C 1TWCC 2E2JC 3GIRA 1WOSA 5IP9K 3GTMC 1B4BA 1TWCK 1WQHA 5L46A 1TWAA 2E2JK 3GTKC 1WCMK 3GEHA 3GTKK 3HOVC 4GTDA 4YG2A 5HL7S 3S2DC 3S2HC 3S2DK 2VUMA 2L3UA 5DM6S 3PIOS 4BXXC 3H3VD 3S2HK 2A6EA 2R93A 3ERED 4P5BA 3V4GA 3I4MC 2KXYA 3BUEA 1VLOA 4M1XA 3MMLB 3SZZA 2JA7C 3AD8C 4Y7NC 3K7AK 4C2MK 2JH3A 3HOZC 4Y7NK 4KM8A 3HOZK 1DCHA 3S1RK 3S15C 1WOPA 4DDQA 3S15K 3GTLA 3TFHA 4P5AA 3I4NC 3M4OK 4WJ4A 3GTOC 1F93A 1HI9A 3G4CA 3I4NK 4U67S 4KMAA 4C45A 4P9SA 5CJ9A 5EGHA 3L4KA 5TMFA 4C3IC 1FEUA 1Y1WC 4G0UA 2ZJPS 1Y1WK 1V5VA 1R9TC 3H0GK 4YFNA 2RGRA 4A3FC 2NVYA 4A3FK 3S1NC 3GEIA 3GTJA 5D4DA 2JA5K 4KARA 3S1NK 3GTPA 1F7UA 1PJ5A 4XSXA 5C3EC 3CQZA 3LYWA 1AB4A 1TWAC 1I6HC 1IL2A 4Q4ZA 4WJ3M 5IOQA 2R7ZA 1TWAK 1I6HK 2YU9C 4OIRA 4AH6A 4KMDA 1I50C 4A3MC 1VGXA 1BS2A 1C0AA 4BY1C 2VUMC 4Y52K 1TWGA 2V6UA 3LAPA 4A3MK 1YCLA 2VUMK 4C3JC 1PJ6A 4KATA 3AQPA 5FJ8K 4A3GC 4A3BK 3GSIA 4FM9A 2XCRB 3AD9C 3HOXC 1UV7A 2R93K 2JA6C 1IQ0A 5M3FK 3HOXK 1JVIA 3S16C 1TWFC 3S16K 2ZJQS 4PAAA 3WODA 5IYDC 1XZPA 1L0WA 2NVTK 4AYBL 4MEYA 2CW0A 4GTCA 1EI6A 4GTAA 2Y0SL 1Y1VA 4KMUA 4WILA 1EH1A 1ISEA 4GTEA 5DM7S 3M3YK 2CFAA 4KDDA 3GTLK 1F7VA 2E2HA 5FLMC 4XSZA 5C44C 2R92A 2B63A 3HOUK 3CF5S 5M3MK 1XZQA 1TWHA 1WSRA 1WCMC 4J3NA 1WIHA 4LJZA 2A6HA 1YNNA 4YFKA 2O5JA 5TJ3A 3FKIA 1I3QA 2E2IA 2NVYC 4ZH4A 1O28A 4X6AK 4BKWA 2NVYK 4QJVA 3GTPC 3GTJK 1K83A 1BDFA 2A69A 1WSVA 2GAHC 3GTPK 3S1QK
chains in the Genus database with same CATH topology
4BBSK 2JA8C 3I4NC 3HOUC 3CQZK 3GTOC 3M4OK 4LK1A 5C3EK 2JA8K 3I4NK 4OINA 2R7ZK 2BE5A 4XLNA 5TMFA 4C3IC 2YU9K 3HOYK 5M5XK 1TWGC 3S17K 5M5YK 3K7AC 4C2MC 1IW7A 2PPBA 4A3CC 1Y1WC 5C4XC 1I50K 1TWGK 4A3KK 1ZYRA 3GTGK 4Q5SA 4BY1K 4A3CK 3S14C 1Y1WK 4MEXA 4X6AC 1I6VA 3S1RC 4C3JK 1R9TC 3H0GK 3S14K 4YFNA 4LK0A 4A3GK 4A3FC 4A3LC 3GTJC 3RZOK 2A68A 5IP7C 2JA6K 4A3FK 3S1NC 5D4DA 5IP7K 5M5WK 3S1QC 3CQZC 3M4OC 2JA5K 3S1NK 4XSXA 1TWFK 5C3EC 2R7ZC 1TWAC 1I6HC 4Q4ZA 5TMCA 5IYDK 3PO3K 1TWAK 1I6HK 2YU9C 4OIRA 3HOYC 3GTMK 3S17C 4QIWD 4G7ZA 1Y1VC 3GTGC 1I50C 2WB1D 4A3MC 2NVXC 4A3KC 1Y1VK 3HOVK 4BY1C 2VUMC 4Y52K 4A3MK 2NVXK 3HKZD 2WAQD 4C3JC 2VUMK 3H0GC 5C4JC 5FJ8K 3PO2K 4A3GC 4A3BK 2PA8D 4AYBD 3RZOC 5C4JK 3HOXC 4BXXK 2R93K 2JA6C 3DXJA 2E2HK 4QIWL 5M3FK 3HOXK 4KN7A 3S16C 1XPPA 2JA5C 2WB1L 2Y0SD 2R92K 3HOWK 4OIQA 4OIOA 2B63K 3I4MK 1TWFC 4C3HK 5FLMK 2PMZD 3S16K 4A3EC 5C44K 1TWHC 2WAQL 1YNJA 3WODA 4JK1A 5IP9C 3HKZL 4A3EK 1TWCC 5IYDC 2E2JC 3PO3C 1TWHK 2NVTK 2PA8L 4AYBL 5IP9K 4QJVB 4MEYA 3GTMC 1TWCK 2E2JK 2CW0A 3GTKC 1WCMK 4NOIA 1I3QC 3GTKK 3HOVC 2Y0SL 4Y52C 4YG2A 2NVQC 1HQMA 3FKIK 1I3QK 3EQLA 4KMUA 2PMZL 2E2IK 4A3DC 3S2DC 2JA7K 2NVQK 3S2HC 4G7HA 3PO2C 4A3BC 4A3DK 3S2DK 2R93C 4BXXC 3H3VD 3S2HK 3S1MC 1K83K 2E2HC 3M3YK 2A6EA 3RZDC 3GTLK 5IYCC 3S1MK 3HOWC 2R92C 4A3JK 2B63C 3I4MC 5FLMC 4C3HC 4G7OA 5IYCK 3RZDK 3GTQK 4XSZA 4MQ9A 5C44C 4LLGA 2O5IA 3HOUK 3GTOK 4OIPA 2NVTC 4KN4A 5M3MK 4BBRC 1SFOC 3H3VL 1WCMC 4C3IK 4BBRK 1SFOK 4LJZA 2A6HA 1YNNA 3FKIC 4YFKA 5IYBC 4Y7NC 2E2IC 2JA7C 3K7AK 4C2MK 5C4XK 3HOZC 2O5JA 4A93C 5IYBK 4Y7NK 4GZYA 2NVYC 4ZH4A 4A3IC 3HOZK 4A93K 4X6AK 4YFXA 3S1RK 1K83C 3M3YC 2NVYK 4QJVA 3S15C 4A3IK 1R9TK 3GTLC 4A3LK 1SMYA 3GTPC 3GTJK 1BDFA 2A69A 4A3JC 4BY7C 3S15K 4XLPA 4BBSC 3GTPK 3GTQC 4BY7K 3S1QK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBS K;  2JA8 C;  3I4N C;  3HOU C;  3CQZ K;  3GTO C;  3M4O K;  4LK1 A;  5C3E K;  2JA8 K;  3I4N K;  4OIN A;  2R7Z K;  2BE5 A;  4XLN A;  5TMF A;  4C3I C;  2YU9 K;  3HOY K;  5M5X K;  1TWG C;  3S17 K;  5M5Y K;  3K7A C;  4C2M C;  1IW7 A;  2PPB A;  4A3C C;  1Y1W C;  5C4X C;  1I50 K;  1TWG K;  4A3K K;  1ZYR A;  3GTG K;  4Q5S A;  4BY1 K;  4A3C K;  3S14 C;  1Y1W K;  4MEX A;  4X6A C;  1I6V A;  3S1R C;  4C3J K;  1R9T C;  3H0G K;  3S14 K;  4YFN A;  4LK0 A;  4A3G K;  4A3F C;  4A3L C;  3GTJ C;  3RZO K;  2A68 A;  5IP7 C;  2JA6 K;  4A3F K;  3S1N C;  5D4D A;  5IP7 K;  5M5W K;  3S1Q C;  3CQZ C;  3M4O C;  2JA5 K;  3S1N K;  4XSX A;  1TWF K;  5C3E C;  2R7Z C;  1TWA C;  1I6H C;  4Q4Z A;  5TMC A;  5IYD K;  3PO3 K;  1TWA K;  1I6H K;  2YU9 C;  4OIR A;  3HOY C;  3GTM K;  3S17 C;  4QIW D;  4G7Z A;  1Y1V C;  3GTG C;  1I50 C;  2WB1 D;  4A3M C;  2NVX C;  4A3K C;  1Y1V K;  3HOV K;  4BY1 C;  2VUM C;  4Y52 K;  4A3M K;  2NVX K;  3HKZ D;  2WAQ D;  4C3J C;  2VUM K;  3H0G C;  5C4J C;  5FJ8 K;  3PO2 K;  4A3G C;  4A3B K;  2PA8 D;  4AYB D;  3RZO C;  5C4J K;  3HOX C;  4BXX K;  2R93 K;  2JA6 C;  3DXJ A;  2E2H K;  4QIW L;  5M3F K;  3HOX K;  4KN7 A;  3S16 C;  1XPP A;  2JA5 C;  2WB1 L;  2Y0S D;  2R92 K;  3HOW K;  4OIQ A;  4OIO A;  2B63 K;  3I4M K;  1TWF C;  4C3H K;  5FLM K;  2PMZ D;  3S16 K;  4A3E C;  5C44 K;  1TWH C;  2WAQ L;  1YNJ A;  3WOD A;  4JK1 A;  5IP9 C;  3HKZ L;  4A3E K;  1TWC C;  5IYD C;  2E2J C;  3PO3 C;  1TWH K;  2NVT K;  2PA8 L;  4AYB L;  5IP9 K;  4QJV B;  4MEY A;  3GTM C;  1TWC K;  2E2J K;  2CW0 A;  3GTK C;  1WCM K;  4NOI A;  1I3Q C;  3GTK K;  3HOV C;  2Y0S L;  4Y52 C;  4YG2 A;  2NVQ C;  1HQM A;  3FKI K;  1I3Q K;  3EQL A;  4KMU A;  2PMZ L;  2E2I K;  4A3D C;  3S2D C;  2JA7 K;  2NVQ K;  3S2H C;  4G7H A;  3PO2 C;  4A3B C;  4A3D K;  3S2D K;  2R93 C;  4BXX C;  3H3V D;  3S2H K;  3S1M C;  1K83 K;  2E2H C;  3M3Y K;  2A6E A;  3RZD C;  3GTL K;  5IYC C;  3S1M K;  3HOW C;  2R92 C;  4A3J K;  2B63 C;  3I4M C;  5FLM C;  4C3H C;  4G7O A;  5IYC K;  3RZD K;  3GTQ K;  4XSZ A;  4MQ9 A;  5C44 C;  4LLG A;  2O5I A;  3HOU K;  3GTO K;  4OIP A;  2NVT C;  4KN4 A;  5M3M K;  4BBR C;  1SFO C;  3H3V L;  1WCM C;  4C3I K;  4BBR K;  1SFO K;  4LJZ A;  2A6H A;  1YNN A;  3FKI C;  4YFK A;  5IYB C;  4Y7N C;  2E2I C;  2JA7 C;  3K7A K;  4C2M K;  5C4X K;  3HOZ C;  2O5J A;  4A93 C;  5IYB K;  4Y7N K;  4GZY A;  2NVY C;  4ZH4 A;  4A3I C;  3HOZ K;  4A93 K;  4X6A K;  4YFX A;  3S1R K;  1K83 C;  3M3Y C;  2NVY K;  4QJV A;  3S15 C;  4A3I K;  1R9T K;  3GTL C;  4A3L K;  1SMY A;  3GTP C;  3GTJ K;  1BDF A;  2A69 A;  4A3J C;  4BY7 C;  3S15 K;  4XLP A;  4BBS C;  3GTP K;  3GTQ C;  4BY7 K;  3S1Q K; 
#chains in the Genus database with same CATH topology
 3CQZ K;  3TTG A;  3GTQ A;  4LK1 A;  1KQ4 A;  2D6F C;  2R7Z K;  3N3Y A;  3HOY K;  1TWG C;  1WQF A;  5IOS A;  3S0X A;  3K7A C;  4C2M C;  1TWG K;  1IE0 A;  4KM9 A;  4IOC S;  3S1R C;  1XZQ B;  2XCQ A;  4LK0 A;  1EFW A;  4IOA S;  1J6V A;  2Y3P A;  5CHP A;  3N0C A;  3QX3 A;  5M5W K;  3M4O C;  3FOE A;  3AQO A;  3G4A A;  5HQH A;  4KB4 A;  2XCO A;  3PO3 K;  1Y1V C;  1XXB A;  1Y1V K;  3GTG A;  3H0G C;  5C4J C;  3L4J A;  3PIP S;  3PO2 K;  4AYB D;  5C4J K;  5JFE A;  1JQW A;  2FQT A;  4GTL A;  3DXJ A;  2E2H K;  1XPP A;  2JA5 C;  3HOW K;  2Y0S D;  2R92 K;  4OIO A;  2B63 K;  4IO9 S;  1EK8 A;  4C3H K;  1PJ7 A;  1TWH C;  3HKZ L;  1O2F B;  1TWH K;  1DCO A;  1USO A;  3Q3Q A;  3TFI A;  3GTM A;  3GEE A;  4NOI A;  1I3Q C;  2GSO A;  1RU0 A;  4Y52 C;  1HQM A;  3FKI K;  1I3Q K;  3EQL A;  2E2I K;  4A3D C;  4G7H A;  4A3B C;  4A3D K;  2R93 C;  3S1M C;  1K83 K;  4LR2 A;  3T00 A;  1YX2 A;  3S1M K;  4A3J K;  4O2D A;  3GTQ K;  4MQ9 A;  4LLG A;  3FHZ A;  4XCH A;  2W7V A;  4KC6 A;  2NVT C;  2GSU A;  4BBR C;  4BBR K;  1ZQ1 C;  3A8I A;  1IBA A;  1DD5 A;  5IYB C;  5C4X K;  4A93 C;  2JA7 A;  5IYB K;  4GZY A;  4A3I C;  2P5M A;  4A93 K;  1O2A A;  3M3Y C;  4A3I K;  3GTL C;  4A3L K;  1GE9 A;  4BY7 C;  1VJE A;  4GT9 A;  4BY7 K;  3HOU C;  2PHC B;  3JST A;  3GTO A;  2BE5 A;  3TFJ A;  3CAG A;  4XLN A;  1ZBS A;  5M5X K;  3S17 K;  1SFO A;  1X31 C;  3GTG K;  2P8T A;  4A3K K;  1ZYR A;  1IS1 A;  1O26 A;  5IOR A;  3S14 C;  4KAW X;  4MEX A;  4X6A C;  3S14 K;  1XZP B;  2FQO A;  3GTJ C;  3RZO K;  2A68 A;  5IP7 C;  2RH6 A;  5IP7 K;  2V6S A;  3S1Q C;  3CQZ C;  2R7Z C;  5TMC A;  3BP8 C;  1O27 A;  1WOO A;  4WFA S;  3HOY C;  2CFA B;  3GTM K;  4G7Z A;  2YU9 A;  3ADA C;  1VRQ C;  3HOV K;  2KPU A;  1I50 A;  3BP3 A;  3LAJ A;  3HKZ D;  3HXA A;  4GTF A;  4WFB S;  5JVG S;  4BXX K;  2KWA A;  4G0W A;  4QIW L;  1WOR A;  4KN7 A;  5EGE A;  2JA6 A;  2WB1 L;  3GDZ A;  4OIQ A;  3I4M K;  1G51 A;  4A3E C;  1TWF A;  1YNJ A;  2WAQ L;  4A3E K;  4WFN S;  3PO3 C;  2PA8 L;  4QJV B;  4PAB A;  3A8K A;  2NVQ C;  2JA7 K;  2PMZ L;  1O24 A;  3N0B A;  3OEP A;  2NVQ K;  5HL8 A;  2NVX A;  3PO2 C;  4GFQ A;  3VA7 A;  1BJT A;  3LPX A;  1INN A;  2E2H C;  3RZD C;  1B4A A;  5IYC C;  3HOW C;  2R92 C;  2B63 C;  1WQG A;  3RZD K;  4C3H C;  4G7O A;  5IYC K;  5IOT A;  4LOW A;  2O5I A;  4FZB A;  3GTO K;  4KAS A;  4OIP A;  4KN4 A;  2EBB A;  3FOF A;  4KMH A;  3H3V L;  1SFO C;  1TWC A;  4C3I K;  1VH2 A;  1SFO K;  1WCM A;  3FKI C;  2E2I C;  3GTK A;  4WF9 S;  1XXA A;  3SZY A;  4GTB A;  3T01 A;  4G0V A;  1EQR A;  4YFX A;  5JVH S;  1K83 C;  1R9T K;  1SMY A;  3ORE A;  4A3J C;  4XLP A;  4BBS C;  3GTQ C;  4BBS K;  2JA8 C;  5C3E K;  2JA8 K;  4OIN A;  2ZJR S;  2ZUE A;  1USM A;  2YU9 K;  2ZFZ A;  5JVO A;  1DCP A;  5M5Y K;  4A3C C;  2PPB A;  1IW7 A;  3T02 A;  1I50 K;  5C4X C;  2ZUF A;  3IPJ A;  4Q5S A;  3OPF A;  4BY1 K;  4A3C K;  1I6V A;  4C3J K;  4BLA A;  1J98 A;  4A3G K;  4A3L C;  1XXC A;  3NUH A;  1ZVU A;  5E68 A;  3A8J A;  2JA6 K;  1J6X A;  3AH5 A;  1BGW A;  4KB2 A;  4LQY A;  1JOE A;  1TWF K;  3DLL S;  3AD7 C;  1J6W A;  5IYD K;  3S17 C;  4QIW D;  3GTG C;  2WB1 D;  1O25 A;  2NVX C;  1ZXO A;  4A3K C;  2V6T A;  2NVX K;  1O2B A;  2WAQ D;  2KQ1 A;  1Y1W A;  4ILD A;  2PA8 D;  3RZO C;  3H0G A;  2L5N A;  2GSN A;  4BLB A;  2GAG C;  4WCE S;  4RMF A;  1O29 A;  1R9T A;  5FLM K;  2PMZ D;  2JA5 A;  5C44 K;  1F9N A;  4JK1 A;  5IP9 C;  1TWC C;  2E2J C;  3GIR A;  1WOS A;  5IP9 K;  3GTM C;  1B4B A;  1TWC K;  1WQH A;  5L46 A;  1TWA A;  2E2J K;  3GTK C;  1WCM K;  3GEH A;  3GTK K;  3HOV C;  4GTD A;  4YG2 A;  5HL7 S;  3S2D C;  3S2H C;  3S2D K;  2VUM A;  2L3U A;  5DM6 S;  3PIO S;  4BXX C;  3H3V D;  3S2H K;  2A6E A;  2R93 A;  3ERE D;  4P5B A;  3V4G A;  3I4M C;  2KXY A;  3BUE A;  1VLO A;  4M1X A;  3MML B;  3SZZ A;  2JA7 C;  3AD8 C;  4Y7N C;  3K7A K;  4C2M K;  2JH3 A;  3HOZ C;  4Y7N K;  4KM8 A;  3HOZ K;  1DCH A;  3S1R K;  3S15 C;  1WOP A;  4DDQ A;  3S15 K;  3GTL A;  3TFH A;  4P5A A;  3I4N C;  3M4O K;  4WJ4 A;  3GTO C;  1F93 A;  1HI9 A;  3G4C A;  3I4N K;  4U67 S;  4KMA A;  4C45 A;  4P9S A;  5CJ9 A;  5EGH A;  3L4K A;  5TMF A;  4C3I C;  1FEU A;  1Y1W C;  4G0U A;  2ZJP S;  1Y1W K;  1V5V A;  1R9T C;  3H0G K;  4YFN A;  2RGR A;  4A3F C;  2NVY A;  4A3F K;  3S1N C;  3GEI A;  3GTJ A;  5D4D A;  2JA5 K;  4KAR A;  3S1N K;  3GTP A;  1F7U A;  1PJ5 A;  4XSX A;  5C3E C;  3CQZ A;  3LYW A;  1AB4 A;  1TWA C;  1I6H C;  1IL2 A;  4Q4Z A;  4WJ3 M;  5IOQ A;  2R7Z A;  1TWA K;  1I6H K;  2YU9 C;  4OIR A;  4AH6 A;  4KMD A;  1I50 C;  4A3M C;  1VGX A;  1BS2 A;  1C0A A;  4BY1 C;  2VUM C;  4Y52 K;  1TWG A;  2V6U A;  3LAP A;  4A3M K;  1YCL A;  2VUM K;  4C3J C;  1PJ6 A;  4KAT A;  3AQP A;  5FJ8 K;  4A3G C;  4A3B K;  3GSI A;  4FM9 A;  2XCR B;  3AD9 C;  3HOX C;  1UV7 A;  2R93 K;  2JA6 C;  1IQ0 A;  5M3F K;  3HOX K;  1JVI A;  3S16 C;  1TWF C;  3S16 K;  2ZJQ S;  4PAA A;  3WOD A;  5IYD C;  1XZP A;  1L0W A;  2NVT K;  4AYB L;  4MEY A;  2CW0 A;  4GTC A;  1EI6 A;  4GTA A;  2Y0S L;  1Y1V A;  4KMU A;  4WIL A;  1EH1 A;  1ISE A;  4GTE A;  5DM7 S;  3M3Y K;  2CFA A;  4KDD A;  3GTL K;  1F7V A;  2E2H A;  5FLM C;  4XSZ A;  5C44 C;  2R92 A;  2B63 A;  3HOU K;  3CF5 S;  5M3M K;  1XZQ A;  1TWH A;  1WSR A;  1WCM C;  4J3N A;  1WIH A;  4LJZ A;  2A6H A;  1YNN A;  4YFK A;  2O5J A;  5TJ3 A;  3FKI A;  1I3Q A;  2E2I A;  2NVY C;  4ZH4 A;  1O28 A;  4X6A K;  4BKW A;  2NVY K;  4QJV A;  3GTP C;  3GTJ K;  1K83 A;  1BDF A;  2A69 A;  1WSV A;  2GAH C;  3GTP K;  3S1Q K; 
#chains in the Genus database with same CATH homology
 4BBS K;  2JA8 C;  3I4N C;  3HOU C;  3CQZ K;  3GTO C;  3M4O K;  4LK1 A;  5C3E K;  2JA8 K;  3I4N K;  4OIN A;  2R7Z K;  2BE5 A;  4XLN A;  5TMF A;  4C3I C;  2YU9 K;  3HOY K;  5M5X K;  1TWG C;  3S17 K;  5M5Y K;  3K7A C;  4C2M C;  1IW7 A;  2PPB A;  4A3C C;  1Y1W C;  5C4X C;  1I50 K;  1TWG K;  4A3K K;  1ZYR A;  3GTG K;  4Q5S A;  4BY1 K;  4A3C K;  3S14 C;  1Y1W K;  4MEX A;  4X6A C;  1I6V A;  3S1R C;  4C3J K;  1R9T C;  3H0G K;  3S14 K;  4YFN A;  4LK0 A;  4A3G K;  4A3F C;  4A3L C;  3GTJ C;  3RZO K;  2A68 A;  5IP7 C;  2JA6 K;  4A3F K;  3S1N C;  5D4D A;  5IP7 K;  5M5W K;  3S1Q C;  3CQZ C;  3M4O C;  2JA5 K;  3S1N K;  4XSX A;  1TWF K;  5C3E C;  2R7Z C;  1TWA C;  1I6H C;  4Q4Z A;  5TMC A;  5IYD K;  3PO3 K;  1TWA K;  1I6H K;  2YU9 C;  4OIR A;  3HOY C;  3GTM K;  3S17 C;  4QIW D;  4G7Z A;  1Y1V C;  3GTG C;  1I50 C;  2WB1 D;  4A3M C;  2NVX C;  4A3K C;  1Y1V K;  3HOV K;  4BY1 C;  2VUM C;  4Y52 K;  4A3M K;  2NVX K;  3HKZ D;  2WAQ D;  4C3J C;  2VUM K;  3H0G C;  5C4J C;  5FJ8 K;  3PO2 K;  4A3G C;  4A3B K;  2PA8 D;  4AYB D;  3RZO C;  5C4J K;  3HOX C;  4BXX K;  2R93 K;  2JA6 C;  3DXJ A;  2E2H K;  4QIW L;  5M3F K;  3HOX K;  4KN7 A;  3S16 C;  1XPP A;  2JA5 C;  2WB1 L;  2Y0S D;  2R92 K;  3HOW K;  4OIQ A;  4OIO A;  2B63 K;  3I4M K;  1TWF C;  4C3H K;  5FLM K;  2PMZ D;  3S16 K;  4A3E C;  5C44 K;  1TWH C;  2WAQ L;  1YNJ A;  3WOD A;  4JK1 A;  5IP9 C;  3HKZ L;  4A3E K;  1TWC C;  5IYD C;  2E2J C;  3PO3 C;  1TWH K;  2NVT K;  2PA8 L;  4AYB L;  5IP9 K;  4QJV B;  4MEY A;  3GTM C;  1TWC K;  2E2J K;  2CW0 A;  3GTK C;  1WCM K;  4NOI A;  1I3Q C;  3GTK K;  3HOV C;  2Y0S L;  4Y52 C;  4YG2 A;  2NVQ C;  1HQM A;  3FKI K;  1I3Q K;  3EQL A;  4KMU A;  2PMZ L;  2E2I K;  4A3D C;  3S2D C;  2JA7 K;  2NVQ K;  3S2H C;  4G7H A;  3PO2 C;  4A3B C;  4A3D K;  3S2D K;  2R93 C;  4BXX C;  3H3V D;  3S2H K;  3S1M C;  1K83 K;  2E2H C;  3M3Y K;  2A6E A;  3RZD C;  3GTL K;  5IYC C;  3S1M K;  3HOW C;  2R92 C;  4A3J K;  2B63 C;  3I4M C;  5FLM C;  4C3H C;  4G7O A;  5IYC K;  3RZD K;  3GTQ K;  4XSZ A;  4MQ9 A;  5C44 C;  4LLG A;  2O5I A;  3HOU K;  3GTO K;  4OIP A;  2NVT C;  4KN4 A;  5M3M K;  4BBR C;  1SFO C;  3H3V L;  1WCM C;  4C3I K;  4BBR K;  1SFO K;  4LJZ A;  2A6H A;  1YNN A;  3FKI C;  4YFK A;  5IYB C;  4Y7N C;  2E2I C;  2JA7 C;  3K7A K;  4C2M K;  5C4X K;  3HOZ C;  2O5J A;  4A93 C;  5IYB K;  4Y7N K;  4GZY A;  2NVY C;  4ZH4 A;  4A3I C;  3HOZ K;  4A93 K;  4X6A K;  4YFX A;  3S1R K;  1K83 C;  3M3Y C;  2NVY K;  4QJV A;  3S15 C;  4A3I K;  1R9T K;  3GTL C;  4A3L K;  1SMY A;  3GTP C;  3GTJ K;  1BDF A;  2A69 A;  4A3J C;  4BY7 C;  3S15 K;  4XLP A;  4BBS C;  3GTP K;  3GTQ C;  4BY7 K;  3S1Q K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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