4A3KC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3kC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3kC01
3HOZC 3H0GC 2PMZD 3HOWK 5M3MK 1TWCK 4C3JC 4Y52C 4QIWL 2B63K 3H3VL 2VUMC 5FLMK 2NVYC 5C4JC 4LLGA 4A3MK 4KN7A 4A3FC 4BY7C 3HOXC 4A3CK 1TWGC 3PO3C 1HQMA 1TWAK 5C44K 4BBSC 2WB1D 1WCMC 4MQ9A 3S1MC 4G7OA 5TMCA 3M3YC 1Y1VC 3WODA 3S17C 3M4OC 5TMFA 4BBRK 3GTJK 2NVQC 3S1NC 3FKIK 2NVXC 1XPPA 1R9TK 3PO2K 5IYDC 3S2HC 1SFOC 3S16K 5IP9K 4A3BK 4AYBL 3CQZC 3K7AC 4QIWD 3H3VD 2JA5C 4A3IK 4A3GK 5FLMC 2E2HK 4A3LK 4A3MC 3S1QK 4A3CC 3S2DK 4C2MC 4A3KK 2A6HA 2JA6C 1TWFC 5M3FK 4NOIA 1IW7A 3I4NC 5C44C 1TWAC 2Y0SL 3S14K 4C3IC 3GTPK 3GTGK 4A93K 5IYBK 4BBRC 4Q4ZA 1I6HC 2NVTK 1Y1WC 3HKZL 3GTJC 4MEYA 3FKIC 4LJZA 4QJVA 1R9TC 3PO2C 1TWHK 3GTLK 4AYBD 1SMYA 2YU9C 4GZYA 3HOUK 1I3QC 5IP9C 4A3BC 5C4XK 4QJVB 1I6VA 4XLNA 4A3IC 4G7HA 4A3GC 4C3HK 2E2HC 4A3LC 3S1RC 4A3DK 2R7ZK 4Y7NC 3HOYC 3S1QC 3K7AK 2Y0SD 4KMUA 3GTOK 4A3DC 1I50C 4ZH4A 4YFXA 2E2JK 4A3JK 4BY1K 3GTQK 3HOWC 1TWCC 2B63C 2JA8K 3HKZD 4A93C 3I4MK 5IYBC 3RZOK 4LK1A 3EQLA 3GTMK 1K83K 1TWHC 3GTLC 3HOVK 3S15K 3HOUC 4BXXK 4X6AK 5C3EK 4OIOA 4YFKA 4Y52K 4JK1A 2PPBA 2VUMK 2NVYK 2R92K 4BY7K 4A3FK 3RZDK 3HOXK 2R93K 1TWGK 3S16C 1BDFA 4LK0A 4MEXA 4A3JC 2E2JC 2JA7K 4BY1C 3GTQC 4BBSK 2JA8C 2WAQL 4A3EK 3M4OK 4XLPA 1Y1VK 3GTMC 2NVQK 3S1NK 4OIRA 3S2DC 1K83C 4A3KC 2NVXK 2E2IK 5IYDK 3S2HK 3HOVC 3S14C 5IP7K 4BXXC 3GTPC 2BE5A 4X6AC 5C3EC 3GTGC 2A69A 2JA5K 2NVTC 2A68A 2O5IA 2PA8L 4KN4A 2R92C 5IYCK 1ZYRA 3RZDC 3GTKK 2R93C 4C2MK 2JA6K 4OIPA 1TWFK 3I4NK 3HOZK 2WAQD 2JA7C 5C4XC 3H0GK 2O5JA 4C3IK 5M5YK 4OINA 2A6EA 4XSZA 4C3JK 4C3HC 2PMZL 4A3EC 1I6HK 1YNNA 5C4JK 4XSXA 4YG2A 5FJ8K 1Y1WK 2R7ZC 3GTOC 5M5XK 2E2IC 3PO3K 2YU9K 5IP7C 5D4DA 1I3QK 1WCMK 3S1MK 1YNJA 2PA8D 4G7ZA 4OIQA 3I4MC 3RZOC 2WB1L 3M3YK 3S17K 3DXJA 4Q5SA 5M5WK 3S1RK 5IYCC 4Y7NK 2CW0A 4YFNA 3HOYK 3GTKC 1SFOK 3S15C 1I50K 3CQZK
chains in the Genus database with same CATH superfamily
3HOZC 3T01A 4C3JC 3BP8C 3GTOA 4LLGA 4KN7A 4BLBA 1JVIA 2WB1D 4MQ9A 3S1MC 5TMCA 3WODA 3S17C 5IP9K 3GIRA 1XZPA 2KWAA 4GT9A 1FEUA 2JA5C 4A3IK 1WQHA 2E2HK 4C2MC 4PAAA 1TWFC 1WCMA 3CAGA 2Y0SL 3S14K 1XXCA 3SZZA 4A93K 2XCQA 1Y1WC 4WFNS 1SFOA 3AD9C 1C0AA 5CJ9A 3OREA 2YU9C 5IP9C 4A3IC 2V6SA 2E2HC 3HOYC 2EBBA 2Y0SD 1TWAA 3ADAC 4FZBA 4YFXA 5DM6S 1EK8A 3BUEA 4BY1K 3GTQK 1TWCC 1IS1A 2CFAA 4A93C 3GTJA 3RZOK 3EQLA 1R9TA 1J6WA 3Q3QA 3A8IA 4C45A 1K83K 4KM9A 1WQGA 4P5BA 1RU0A 4OIOA 1B4AA 3N0CA 4JK1A 2VUMK 2R92K 4A3FK 1TWGK 1BDFA 2ZJQS 1IE0A 4LK0A 4WILA 4IOAS 4BY1C 3GTQC 4GTBA 2L3UA 2WAQL 1EFWA 3CF5S 5TJ3A 2NVQK 3S2DC 1K83C 2NVXK 3S2HK 1IQ0A 2A68A 1VJEA 3GEHA 2R7ZA 4KMHA 2R92C 4KMAA 5IYCK 1ZYRA 4GTFA 3GTKK 2JA6K 3I4NK 2WAQD 1UV7A 5EGEA 2ZFZA 4OINA 3GTMA 1YNNA 1DCHA 5FJ8K 2R7ZC 1J98A 3OPFA 5M5XK 1F7VA 3PO3K 3GTPA 3GTGA 1ZVUA 2NVYA 4Q5SA 5M5WK 3S1RK 5IYCC 2CW0A 3GTKC 1DCPA 3TFIA 2B63K 5FLMK 2NVYC 4BY7C 2E2IA 5JFEA 2KXYA 3A8KA 3PO3C 5JVHS 4KATA 1XZQA 2PHCB 3M4OC 1Y1VC 1O2AA 3S1NC 1XPPA 3TFHA 1F93A 2FQTA 3LPXA 4A3GK 5FLMC 2GAHC 5EGHA 3PIPS 2ZJPS 4A3DK 2A6HA 3IPJA 1I3QA 4NOIA 3AQOA 5DM7S 5L46A 1EQRA 3AD8C 5IYBK 1I6HC 2XCRB 3LAPA 4O2DA 1I3QC 1G51A 2JA5A 1WSVA 3GEEA 5C4XK 4QJVB 3JSTA 4KB4A 4XLNA 4A3GC 4G7HA 1YCLA 1TWFA 3L4JA 3GTOK 2XCOA 1JOEA 4A3DC 4GTDA 1I50C 1WOPA 2E2JK 4KMDA 2V6TA 1Y1WA 5IYBC 4LK1A 3ERED 3LAJA 3T00A 1EH1A 2YU9A 4DDQA 1L0WA 2GSNA 3S15K 4X6AK 4GTEA 2E2HA 4Y52K 2PPBA 1DCOA 4U67S 3HOXK 3RZDK 2R93K 1TWCA 2JH3A 2E2JC 5HQHA 4BBSK 4PABA 4A3EK 1IL2A 3AD7C 1V5VA 3MMLB 4WFAS 5IYDK 3S14C 5IP7K 3G4AA 2V6UA 4X6AC 2O5IA 2PA8L 1INNA 3RZDC 2R93C 3GTQA 1JQWA 3H0GK 4C3IK 5M5YK 4XSZA 2PMZL 4A3EC 3BP3A 5C4JK 1XXBA 4XSXA 1BS2A 1K83A 4AH6A 3FHZA 5IP7C 2PA8D 3M3YK 3RZOC 4WFBS 4KB2A 2R92A 1TWGA 3TFJA 1O26A 4Y7NK 4YFNA 4P9SA 1WORA 3CQZK 3K7AK 1X31C 3H0GC 2PMZD 3HOWK 5M3MK 2VUMC 1F7UA 5C4JC 1WQFA 4A3MK 4A3FC 4A3CK 1TWGC 3S0XA 1HQMA 4J3NA 4BBRK 3M3YC 4GTCA 5TMFA 2NVQC 3FKIK 3GTKA 2NVXC 2JA6A 1VH2A 1PJ5A 3S2HC 1DD5A 3G4CA 2ZUEA 4WCES 3S16K 4AYBL 3CQZC 3K7AC 4G0VA 4KM8A 2GSOA 1WSRA 4A3MC 1XZPB 3AQPA 3S1QK 4A3CC 4A3KK 2JA6C 5M3FK 1IW7A 3I4NC 1O28A 1Y1VA 3GTPK 3GTGK 1IBAA 4BBRC 4Q4ZA 2NVTK 3HKZL 3L4KA 4MEYA 3FKIC 4LJZA 2P5MA 1TWHK 3GTLK 4AYBD 2Y3PA 4GZYA 3HOUK 1YX2A 2P8TA 4C3HK 4XCHA 3S1RC 3V4GA 1USMA 3S1QC 4KAWX 4KMUA 1PJ7A 4ZH4A 4A3JK 3NUHA 4KARA 2B63C 2JA8K 3HKZD 1O29A 4P5AA 3I4MK 1O24A 1ZXOA 2CFAB 2RGRA 1TWHC 3GTLC 3GSIA 1HI9A 3HOUC 4BXXK 5C3EK 1AB4A 1I50A 4GFQA 4WJ3M 4G0UA 4A3JC 3T02A 2JA7K 5E68A 2JA8C 3GDZA 3OEPA 4XLPA 2KQ1A 4OIRA 4IOCS 3A8JA 5JVGS 4BXXC 5C3EC 3TTGA 2A69A 2JA5K 1VLOA 4LR2A 1ZBSA 4M1XA 4IO9S 3FOFA 4C2MK 1TWFK 1XXAA 4LOWA 2JA7C 5C4XC 4GTAA 3N3YA 1Y1WK 4LQYA 3GTOC 1J6VA 3VA7A 2YU9K 5D4DA 1WCMK 4G7ZA 4OIQA 3DXJA 2R93A 5IOQA 1F9NA 3HOYK 1SFOK 3S15C 4ILDA 5IORA 1TWCK 4QIWL 4Y52C 5HL8A 3H3VL 4WF9S 3HOXC 4KC6A 5C44K 1TWAK 3N0BA 4BBSC 1WCMC 2FQOA 4G7OA 3GTJK 1XZQB 4WJ4A 1R9TK 3PO2K 2GSUA 5IYDC 1SFOC 3H0GA 4G0WA 4A3BK 4QIWD 3H3VD 2VUMA 4A3LK 2ZJRS 3SZYA 1VRQC 3S2DK 2ZUFA 5C44C 1TWAC 1VGXA 4C3IC 1BGWA 2GAGC 2NVXA 3GTJC 1J6XA 4KDDA 4QJVA 1R9TC 3PO2C 4BLAA 3CQZA 1SMYA 3GEIA 4A3BC 1I6VA 4GTLA 4A3LC 5HL7S 2R7ZK 4Y7NC 5IOSA 1O2BA 5JVOA 3HOWC 3FKIA 2RH6A 3GTMK 3FOEA 3HOVK 2D6FC 1GE9A 5CHPA 4YFKA 1O25A 2NVYK 4BY7K 1USOA 3S16C 2B63A 4MEXA 1PJ6A 3M4OK 1Y1VK 1WOOA 3GTMC 1TWHA 3S1NK 3GTLA 4A3KC 2E2IK 3HOVC 2L5NA 3DLLS 1ISEA 3GTPC 2BE5A 3GTGC 3AH5A 2NVTC 1BJTA 4KN4A 4BKWA 2KPUA 4FM9A 2W7VA 4OIPA 3HOZK 2O5JA 4C3JK 2A6EA 3QX3A 4C3HC 1I6HK 4YG2A 1ZQ1C 3HXAA 1O27A 4RMFA 2E2IC 1O2FB 4KASA 1I3QK 5IOTA 1YNJA 3LYWA 3I4MC 1B4BA 2WB1L 3S17K 1KQ4A 3S1MK 1WOSA 3PIOS 1EI6A 2JA7A 1I50K 1WIHA
chains in the Genus database with same CATH topology
3HOZC 3H0GC 2PMZD 3HOWK 5M3MK 1TWCK 4C3JC 4Y52C 4QIWL 2B63K 3H3VL 2VUMC 5FLMK 2NVYC 5C4JC 4LLGA 4A3MK 4KN7A 4A3FC 4BY7C 3HOXC 4A3CK 1TWGC 3PO3C 1HQMA 1TWAK 5C44K 4BBSC 2WB1D 1WCMC 4MQ9A 3S1MC 4G7OA 5TMCA 3M3YC 1Y1VC 3WODA 3S17C 3M4OC 5TMFA 4BBRK 3GTJK 2NVQC 3S1NC 3FKIK 2NVXC 1XPPA 1R9TK 3PO2K 5IYDC 3S2HC 1SFOC 3S16K 5IP9K 4A3BK 4AYBL 3CQZC 3K7AC 4QIWD 3H3VD 2JA5C 4A3IK 4A3GK 5FLMC 2E2HK 4A3LK 4A3MC 3S1QK 4A3CC 3S2DK 4C2MC 4A3KK 2A6HA 2JA6C 1TWFC 5M3FK 4NOIA 1IW7A 3I4NC 5C44C 1TWAC 2Y0SL 3S14K 4C3IC 3GTPK 3GTGK 4A93K 5IYBK 4BBRC 4Q4ZA 1I6HC 2NVTK 1Y1WC 3HKZL 3GTJC 4MEYA 3FKIC 4LJZA 4QJVA 1R9TC 3PO2C 1TWHK 3GTLK 4AYBD 1SMYA 2YU9C 4GZYA 3HOUK 1I3QC 5IP9C 4A3BC 5C4XK 4QJVB 1I6VA 4XLNA 4A3IC 4G7HA 4A3GC 4C3HK 2E2HC 4A3LC 3S1RC 4A3DK 2R7ZK 4Y7NC 3HOYC 3S1QC 3K7AK 2Y0SD 4KMUA 3GTOK 4A3DC 1I50C 4ZH4A 4YFXA 2E2JK 4A3JK 4BY1K 3GTQK 3HOWC 1TWCC 2B63C 2JA8K 3HKZD 4A93C 3I4MK 5IYBC 3RZOK 4LK1A 3EQLA 3GTMK 1K83K 1TWHC 3GTLC 3HOVK 3S15K 3HOUC 4BXXK 4X6AK 5C3EK 4OIOA 4YFKA 4Y52K 4JK1A 2PPBA 2VUMK 2NVYK 2R92K 4BY7K 4A3FK 3RZDK 3HOXK 2R93K 1TWGK 3S16C 1BDFA 4LK0A 4MEXA 4A3JC 2E2JC 2JA7K 4BY1C 3GTQC 4BBSK 2JA8C 2WAQL 4A3EK 3M4OK 4XLPA 1Y1VK 3GTMC 2NVQK 3S1NK 4OIRA 3S2DC 1K83C 4A3KC 2NVXK 2E2IK 5IYDK 3S2HK 3HOVC 3S14C 5IP7K 4BXXC 3GTPC 2BE5A 4X6AC 5C3EC 3GTGC 2A69A 2JA5K 2NVTC 2A68A 2O5IA 2PA8L 4KN4A 2R92C 5IYCK 1ZYRA 3RZDC 3GTKK 2R93C 4C2MK 2JA6K 4OIPA 1TWFK 3I4NK 3HOZK 2WAQD 2JA7C 5C4XC 3H0GK 2O5JA 4C3IK 5M5YK 4OINA 2A6EA 4XSZA 4C3JK 4C3HC 2PMZL 4A3EC 1I6HK 1YNNA 5C4JK 4XSXA 4YG2A 5FJ8K 1Y1WK 2R7ZC 3GTOC 5M5XK 2E2IC 3PO3K 2YU9K 5IP7C 5D4DA 1I3QK 1WCMK 3S1MK 1YNJA 2PA8D 4G7ZA 4OIQA 3I4MC 3RZOC 2WB1L 3M3YK 3S17K 3DXJA 4Q5SA 5M5WK 3S1RK 5IYCC 4Y7NK 2CW0A 4YFNA 3HOYK 3GTKC 1SFOK 3S15C 1I50K 3CQZK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOZ C;  3H0G C;  2PMZ D;  3HOW K;  5M3M K;  1TWC K;  4C3J C;  4Y52 C;  4QIW L;  2B63 K;  3H3V L;  2VUM C;  5FLM K;  2NVY C;  5C4J C;  4LLG A;  4A3M K;  4KN7 A;  4A3F C;  4BY7 C;  3HOX C;  4A3C K;  1TWG C;  3PO3 C;  1HQM A;  1TWA K;  5C44 K;  4BBS C;  2WB1 D;  1WCM C;  4MQ9 A;  3S1M C;  4G7O A;  5TMC A;  3M3Y C;  1Y1V C;  3WOD A;  3S17 C;  3M4O C;  5TMF A;  4BBR K;  3GTJ K;  2NVQ C;  3S1N C;  3FKI K;  2NVX C;  1XPP A;  1R9T K;  3PO2 K;  5IYD C;  3S2H C;  1SFO C;  3S16 K;  5IP9 K;  4A3B K;  4AYB L;  3CQZ C;  3K7A C;  4QIW D;  3H3V D;  2JA5 C;  4A3I K;  4A3G K;  5FLM C;  2E2H K;  4A3L K;  4A3M C;  3S1Q K;  4A3C C;  3S2D K;  4C2M C;  4A3K K;  2A6H A;  2JA6 C;  1TWF C;  5M3F K;  4NOI A;  1IW7 A;  3I4N C;  5C44 C;  1TWA C;  2Y0S L;  3S14 K;  4C3I C;  3GTP K;  3GTG K;  4A93 K;  5IYB K;  4BBR C;  4Q4Z A;  1I6H C;  2NVT K;  1Y1W C;  3HKZ L;  3GTJ C;  4MEY A;  3FKI C;  4LJZ A;  4QJV A;  1R9T C;  3PO2 C;  1TWH K;  3GTL K;  4AYB D;  1SMY A;  2YU9 C;  4GZY A;  3HOU K;  1I3Q C;  5IP9 C;  4A3B C;  5C4X K;  4QJV B;  1I6V A;  4XLN A;  4A3I C;  4G7H A;  4A3G C;  4C3H K;  2E2H C;  4A3L C;  3S1R C;  4A3D K;  2R7Z K;  4Y7N C;  3HOY C;  3S1Q C;  3K7A K;  2Y0S D;  4KMU A;  3GTO K;  4A3D C;  1I50 C;  4ZH4 A;  4YFX A;  2E2J K;  4A3J K;  4BY1 K;  3GTQ K;  3HOW C;  1TWC C;  2B63 C;  2JA8 K;  3HKZ D;  4A93 C;  3I4M K;  5IYB C;  3RZO K;  4LK1 A;  3EQL A;  3GTM K;  1K83 K;  1TWH C;  3GTL C;  3HOV K;  3S15 K;  3HOU C;  4BXX K;  4X6A K;  5C3E K;  4OIO A;  4YFK A;  4Y52 K;  4JK1 A;  2PPB A;  2VUM K;  2NVY K;  2R92 K;  4BY7 K;  4A3F K;  3RZD K;  3HOX K;  2R93 K;  1TWG K;  3S16 C;  1BDF A;  4LK0 A;  4MEX A;  4A3J C;  2E2J C;  2JA7 K;  4BY1 C;  3GTQ C;  4BBS K;  2JA8 C;  2WAQ L;  4A3E K;  3M4O K;  4XLP A;  1Y1V K;  3GTM C;  2NVQ K;  3S1N K;  4OIR A;  3S2D C;  1K83 C;  4A3K C;  2NVX K;  2E2I K;  5IYD K;  3S2H K;  3HOV C;  3S14 C;  5IP7 K;  4BXX C;  3GTP C;  2BE5 A;  4X6A C;  5C3E C;  3GTG C;  2A69 A;  2JA5 K;  2NVT C;  2A68 A;  2O5I A;  2PA8 L;  4KN4 A;  2R92 C;  5IYC K;  1ZYR A;  3RZD C;  3GTK K;  2R93 C;  4C2M K;  2JA6 K;  4OIP A;  1TWF K;  3I4N K;  3HOZ K;  2WAQ D;  2JA7 C;  5C4X C;  3H0G K;  2O5J A;  4C3I K;  5M5Y K;  4OIN A;  2A6E A;  4XSZ A;  4C3J K;  4C3H C;  2PMZ L;  4A3E C;  1I6H K;  1YNN A;  5C4J K;  4XSX A;  4YG2 A;  5FJ8 K;  1Y1W K;  2R7Z C;  3GTO C;  5M5X K;  2E2I C;  3PO3 K;  2YU9 K;  5IP7 C;  5D4D A;  1I3Q K;  1WCM K;  3S1M K;  1YNJ A;  2PA8 D;  4G7Z A;  4OIQ A;  3I4M C;  3RZO C;  2WB1 L;  3M3Y K;  3S17 K;  3DXJ A;  4Q5S A;  5M5W K;  3S1R K;  5IYC C;  4Y7N K;  2CW0 A;  4YFN A;  3HOY K;  3GTK C;  1SFO K;  3S15 C;  1I50 K;  3CQZ K; 
#chains in the Genus database with same CATH topology
 3HOZ C;  3T01 A;  4C3J C;  3BP8 C;  3GTO A;  4LLG A;  4KN7 A;  4BLB A;  1JVI A;  2WB1 D;  4MQ9 A;  3S1M C;  5TMC A;  3WOD A;  3S17 C;  5IP9 K;  3GIR A;  1XZP A;  2KWA A;  4GT9 A;  1FEU A;  2JA5 C;  4A3I K;  1WQH A;  2E2H K;  4C2M C;  4PAA A;  1TWF C;  1WCM A;  3CAG A;  2Y0S L;  3S14 K;  1XXC A;  3SZZ A;  4A93 K;  2XCQ A;  1Y1W C;  4WFN S;  1SFO A;  3AD9 C;  1C0A A;  5CJ9 A;  3ORE A;  2YU9 C;  5IP9 C;  4A3I C;  2V6S A;  2E2H C;  3HOY C;  2EBB A;  2Y0S D;  1TWA A;  3ADA C;  4FZB A;  4YFX A;  5DM6 S;  1EK8 A;  3BUE A;  4BY1 K;  3GTQ K;  1TWC C;  1IS1 A;  2CFA A;  4A93 C;  3GTJ A;  3RZO K;  3EQL A;  1R9T A;  1J6W A;  3Q3Q A;  3A8I A;  4C45 A;  1K83 K;  4KM9 A;  1WQG A;  4P5B A;  1RU0 A;  4OIO A;  1B4A A;  3N0C A;  4JK1 A;  2VUM K;  2R92 K;  4A3F K;  1TWG K;  1BDF A;  2ZJQ S;  1IE0 A;  4LK0 A;  4WIL A;  4IOA S;  4BY1 C;  3GTQ C;  4GTB A;  2L3U A;  2WAQ L;  1EFW A;  3CF5 S;  5TJ3 A;  2NVQ K;  3S2D C;  1K83 C;  2NVX K;  3S2H K;  1IQ0 A;  2A68 A;  1VJE A;  3GEH A;  2R7Z A;  4KMH A;  2R92 C;  4KMA A;  5IYC K;  1ZYR A;  4GTF A;  3GTK K;  2JA6 K;  3I4N K;  2WAQ D;  1UV7 A;  5EGE A;  2ZFZ A;  4OIN A;  3GTM A;  1YNN A;  1DCH A;  5FJ8 K;  2R7Z C;  1J98 A;  3OPF A;  5M5X K;  1F7V A;  3PO3 K;  3GTP A;  3GTG A;  1ZVU A;  2NVY A;  4Q5S A;  5M5W K;  3S1R K;  5IYC C;  2CW0 A;  3GTK C;  1DCP A;  3TFI A;  2B63 K;  5FLM K;  2NVY C;  4BY7 C;  2E2I A;  5JFE A;  2KXY A;  3A8K A;  3PO3 C;  5JVH S;  4KAT A;  1XZQ A;  2PHC B;  3M4O C;  1Y1V C;  1O2A A;  3S1N C;  1XPP A;  3TFH A;  1F93 A;  2FQT A;  3LPX A;  4A3G K;  5FLM C;  2GAH C;  5EGH A;  3PIP S;  2ZJP S;  4A3D K;  2A6H A;  3IPJ A;  1I3Q A;  4NOI A;  3AQO A;  5DM7 S;  5L46 A;  1EQR A;  3AD8 C;  5IYB K;  1I6H C;  2XCR B;  3LAP A;  4O2D A;  1I3Q C;  1G51 A;  2JA5 A;  1WSV A;  3GEE A;  5C4X K;  4QJV B;  3JST A;  4KB4 A;  4XLN A;  4A3G C;  4G7H A;  1YCL A;  1TWF A;  3L4J A;  3GTO K;  2XCO A;  1JOE A;  4A3D C;  4GTD A;  1I50 C;  1WOP A;  2E2J K;  4KMD A;  2V6T A;  1Y1W A;  5IYB C;  4LK1 A;  3ERE D;  3LAJ A;  3T00 A;  1EH1 A;  2YU9 A;  4DDQ A;  1L0W A;  2GSN A;  3S15 K;  4X6A K;  4GTE A;  2E2H A;  4Y52 K;  2PPB A;  1DCO A;  4U67 S;  3HOX K;  3RZD K;  2R93 K;  1TWC A;  2JH3 A;  2E2J C;  5HQH A;  4BBS K;  4PAB A;  4A3E K;  1IL2 A;  3AD7 C;  1V5V A;  3MML B;  4WFA S;  5IYD K;  3S14 C;  5IP7 K;  3G4A A;  2V6U A;  4X6A C;  2O5I A;  2PA8 L;  1INN A;  3RZD C;  2R93 C;  3GTQ A;  1JQW A;  3H0G K;  4C3I K;  5M5Y K;  4XSZ A;  2PMZ L;  4A3E C;  3BP3 A;  5C4J K;  1XXB A;  4XSX A;  1BS2 A;  1K83 A;  4AH6 A;  3FHZ A;  5IP7 C;  2PA8 D;  3M3Y K;  3RZO C;  4WFB S;  4KB2 A;  2R92 A;  1TWG A;  3TFJ A;  1O26 A;  4Y7N K;  4YFN A;  4P9S A;  1WOR A;  3CQZ K;  3K7A K;  1X31 C;  3H0G C;  2PMZ D;  3HOW K;  5M3M K;  2VUM C;  1F7U A;  5C4J C;  1WQF A;  4A3M K;  4A3F C;  4A3C K;  1TWG C;  3S0X A;  1HQM A;  4J3N A;  4BBR K;  3M3Y C;  4GTC A;  5TMF A;  2NVQ C;  3FKI K;  3GTK A;  2NVX C;  2JA6 A;  1VH2 A;  1PJ5 A;  3S2H C;  1DD5 A;  3G4C A;  2ZUE A;  4WCE S;  3S16 K;  4AYB L;  3CQZ C;  3K7A C;  4G0V A;  4KM8 A;  2GSO A;  1WSR A;  4A3M C;  1XZP B;  3AQP A;  3S1Q K;  4A3C C;  4A3K K;  2JA6 C;  5M3F K;  1IW7 A;  3I4N C;  1O28 A;  1Y1V A;  3GTP K;  3GTG K;  1IBA A;  4BBR C;  4Q4Z A;  2NVT K;  3HKZ L;  3L4K A;  4MEY A;  3FKI C;  4LJZ A;  2P5M A;  1TWH K;  3GTL K;  4AYB D;  2Y3P A;  4GZY A;  3HOU K;  1YX2 A;  2P8T A;  4C3H K;  4XCH A;  3S1R C;  3V4G A;  1USM A;  3S1Q C;  4KAW X;  4KMU A;  1PJ7 A;  4ZH4 A;  4A3J K;  3NUH A;  4KAR A;  2B63 C;  2JA8 K;  3HKZ D;  1O29 A;  4P5A A;  3I4M K;  1O24 A;  1ZXO A;  2CFA B;  2RGR A;  1TWH C;  3GTL C;  3GSI A;  1HI9 A;  3HOU C;  4BXX K;  5C3E K;  1AB4 A;  1I50 A;  4GFQ A;  4WJ3 M;  4G0U A;  4A3J C;  3T02 A;  2JA7 K;  5E68 A;  2JA8 C;  3GDZ A;  3OEP A;  4XLP A;  2KQ1 A;  4OIR A;  4IOC S;  3A8J A;  5JVG S;  4BXX C;  5C3E C;  3TTG A;  2A69 A;  2JA5 K;  1VLO A;  4LR2 A;  1ZBS A;  4M1X A;  4IO9 S;  3FOF A;  4C2M K;  1TWF K;  1XXA A;  4LOW A;  2JA7 C;  5C4X C;  4GTA A;  3N3Y A;  1Y1W K;  4LQY A;  3GTO C;  1J6V A;  3VA7 A;  2YU9 K;  5D4D A;  1WCM K;  4G7Z A;  4OIQ A;  3DXJ A;  2R93 A;  5IOQ A;  1F9N A;  3HOY K;  1SFO K;  3S15 C;  4ILD A;  5IOR A;  1TWC K;  4QIW L;  4Y52 C;  5HL8 A;  3H3V L;  4WF9 S;  3HOX C;  4KC6 A;  5C44 K;  1TWA K;  3N0B A;  4BBS C;  1WCM C;  2FQO A;  4G7O A;  3GTJ K;  1XZQ B;  4WJ4 A;  1R9T K;  3PO2 K;  2GSU A;  5IYD C;  1SFO C;  3H0G A;  4G0W A;  4A3B K;  4QIW D;  3H3V D;  2VUM A;  4A3L K;  2ZJR S;  3SZY A;  1VRQ C;  3S2D K;  2ZUF A;  5C44 C;  1TWA C;  1VGX A;  4C3I C;  1BGW A;  2GAG C;  2NVX A;  3GTJ C;  1J6X A;  4KDD A;  4QJV A;  1R9T C;  3PO2 C;  4BLA A;  3CQZ A;  1SMY A;  3GEI A;  4A3B C;  1I6V A;  4GTL A;  4A3L C;  5HL7 S;  2R7Z K;  4Y7N C;  5IOS A;  1O2B A;  5JVO A;  3HOW C;  3FKI A;  2RH6 A;  3GTM K;  3FOE A;  3HOV K;  2D6F C;  1GE9 A;  5CHP A;  4YFK A;  1O25 A;  2NVY K;  4BY7 K;  1USO A;  3S16 C;  2B63 A;  4MEX A;  1PJ6 A;  3M4O K;  1Y1V K;  1WOO A;  3GTM C;  1TWH A;  3S1N K;  3GTL A;  4A3K C;  2E2I K;  3HOV C;  2L5N A;  3DLL S;  1ISE A;  3GTP C;  2BE5 A;  3GTG C;  3AH5 A;  2NVT C;  1BJT A;  4KN4 A;  4BKW A;  2KPU A;  4FM9 A;  2W7V A;  4OIP A;  3HOZ K;  2O5J A;  4C3J K;  2A6E A;  3QX3 A;  4C3H C;  1I6H K;  4YG2 A;  1ZQ1 C;  3HXA A;  1O27 A;  4RMF A;  2E2I C;  1O2F B;  4KAS A;  1I3Q K;  5IOT A;  1YNJ A;  3LYW A;  3I4M C;  1B4B A;  2WB1 L;  3S17 K;  1KQ4 A;  3S1M K;  1WOS A;  3PIO S;  1EI6 A;  2JA7 A;  1I50 K;  1WIH A; 
#chains in the Genus database with same CATH homology
 3HOZ C;  3H0G C;  2PMZ D;  3HOW K;  5M3M K;  1TWC K;  4C3J C;  4Y52 C;  4QIW L;  2B63 K;  3H3V L;  2VUM C;  5FLM K;  2NVY C;  5C4J C;  4LLG A;  4A3M K;  4KN7 A;  4A3F C;  4BY7 C;  3HOX C;  4A3C K;  1TWG C;  3PO3 C;  1HQM A;  1TWA K;  5C44 K;  4BBS C;  2WB1 D;  1WCM C;  4MQ9 A;  3S1M C;  4G7O A;  5TMC A;  3M3Y C;  1Y1V C;  3WOD A;  3S17 C;  3M4O C;  5TMF A;  4BBR K;  3GTJ K;  2NVQ C;  3S1N C;  3FKI K;  2NVX C;  1XPP A;  1R9T K;  3PO2 K;  5IYD C;  3S2H C;  1SFO C;  3S16 K;  5IP9 K;  4A3B K;  4AYB L;  3CQZ C;  3K7A C;  4QIW D;  3H3V D;  2JA5 C;  4A3I K;  4A3G K;  5FLM C;  2E2H K;  4A3L K;  4A3M C;  3S1Q K;  4A3C C;  3S2D K;  4C2M C;  4A3K K;  2A6H A;  2JA6 C;  1TWF C;  5M3F K;  4NOI A;  1IW7 A;  3I4N C;  5C44 C;  1TWA C;  2Y0S L;  3S14 K;  4C3I C;  3GTP K;  3GTG K;  4A93 K;  5IYB K;  4BBR C;  4Q4Z A;  1I6H C;  2NVT K;  1Y1W C;  3HKZ L;  3GTJ C;  4MEY A;  3FKI C;  4LJZ A;  4QJV A;  1R9T C;  3PO2 C;  1TWH K;  3GTL K;  4AYB D;  1SMY A;  2YU9 C;  4GZY A;  3HOU K;  1I3Q C;  5IP9 C;  4A3B C;  5C4X K;  4QJV B;  1I6V A;  4XLN A;  4A3I C;  4G7H A;  4A3G C;  4C3H K;  2E2H C;  4A3L C;  3S1R C;  4A3D K;  2R7Z K;  4Y7N C;  3HOY C;  3S1Q C;  3K7A K;  2Y0S D;  4KMU A;  3GTO K;  4A3D C;  1I50 C;  4ZH4 A;  4YFX A;  2E2J K;  4A3J K;  4BY1 K;  3GTQ K;  3HOW C;  1TWC C;  2B63 C;  2JA8 K;  3HKZ D;  4A93 C;  3I4M K;  5IYB C;  3RZO K;  4LK1 A;  3EQL A;  3GTM K;  1K83 K;  1TWH C;  3GTL C;  3HOV K;  3S15 K;  3HOU C;  4BXX K;  4X6A K;  5C3E K;  4OIO A;  4YFK A;  4Y52 K;  4JK1 A;  2PPB A;  2VUM K;  2NVY K;  2R92 K;  4BY7 K;  4A3F K;  3RZD K;  3HOX K;  2R93 K;  1TWG K;  3S16 C;  1BDF A;  4LK0 A;  4MEX A;  4A3J C;  2E2J C;  2JA7 K;  4BY1 C;  3GTQ C;  4BBS K;  2JA8 C;  2WAQ L;  4A3E K;  3M4O K;  4XLP A;  1Y1V K;  3GTM C;  2NVQ K;  3S1N K;  4OIR A;  3S2D C;  1K83 C;  4A3K C;  2NVX K;  2E2I K;  5IYD K;  3S2H K;  3HOV C;  3S14 C;  5IP7 K;  4BXX C;  3GTP C;  2BE5 A;  4X6A C;  5C3E C;  3GTG C;  2A69 A;  2JA5 K;  2NVT C;  2A68 A;  2O5I A;  2PA8 L;  4KN4 A;  2R92 C;  5IYC K;  1ZYR A;  3RZD C;  3GTK K;  2R93 C;  4C2M K;  2JA6 K;  4OIP A;  1TWF K;  3I4N K;  3HOZ K;  2WAQ D;  2JA7 C;  5C4X C;  3H0G K;  2O5J A;  4C3I K;  5M5Y K;  4OIN A;  2A6E A;  4XSZ A;  4C3J K;  4C3H C;  2PMZ L;  4A3E C;  1I6H K;  1YNN A;  5C4J K;  4XSX A;  4YG2 A;  5FJ8 K;  1Y1W K;  2R7Z C;  3GTO C;  5M5X K;  2E2I C;  3PO3 K;  2YU9 K;  5IP7 C;  5D4D A;  1I3Q K;  1WCM K;  3S1M K;  1YNJ A;  2PA8 D;  4G7Z A;  4OIQ A;  3I4M C;  3RZO C;  2WB1 L;  3M3Y K;  3S17 K;  3DXJ A;  4Q5S A;  5M5W K;  3S1R K;  5IYC C;  4Y7N K;  2CW0 A;  4YFN A;  3HOY K;  3GTK C;  1SFO K;  3S15 C;  1I50 K;  3CQZ K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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