4A3KC

Rna polymerase ii initial transcribing complex with a 7nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Basis of Initial RNA Polymerase II Transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3kC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3kC01
5M5XK 4KN4A 2NVQK 4LK1A 4YFXA 1ZYRA 2E2JK 3GTPC 2NVXK 1I3QK 2R92C 3HOXK 2JA8K 3GTKK 2CW0A 2E2IK 5IP9K 3FKIC 3PO2C 4C3JC 4A3JC 4A3DK 2A68A 1SFOK 3H0GK 5FLMC 2A69A 4A3GK 5IYDK 3S1MC 4QJVB 2PA8L 5M5WK 5TMCA 4OIPA 1YNJA 4OIQA 3M3YC 1HQMA 4BBRC 3GTJK 3GTGK 3EQLA 4A93C 3M4OC 2YU9K 4X6AK 2PA8D 5C4JK 3GTMC 4JK1A 1Y1VK 4Q4ZA 2JA7C 4Y52K 4LLGA 2VUMC 4A3LC 3HOYC 3HOZK 2Y0SL 3HOUC 1IW7A 4C3IC 4AYBL 3HOWC 4C2MK 5C44C 5TMFA 5FJ8K 1TWFK 4A3IC 3RZOC 4BXXK 2PMZD 3CQZK 3HKZD 2JA6C 4LK0A 1Y1WK 2R92K 2R7ZK 3S14C 4AYBD 3S17C 1TWHK 3H3VL 3S15K 4BBSC 4MEXA 4GZYA 2E2HK 3PO2K 2NVQC 4A3DC 3S1NC 4Y7NK 4KN7A 3I4NC 5C4XK 3K7AK 4YFNA 3PO3K 3S1MK 1I3QC 2O5IA 2WAQD 1K83C 4OIOA 5IYCK 5C3EK 2JA5K 4A3EK 2BE5A 3GTQC 3H3VD 2E2IC 1I6HC 1R9TC 2R93C 4BBRK 5M3MK 4BY7K 3FKIK 3HKZL 4XSZA 4X6AC 2O5JA 4G7OA 4C3JK 4A3JK 5C4JC 3H0GC 1WCMK 3S2HC 3I4MK 2JA7K 4OINA 2VUMK 4A3LK 4G7HA 3HOZC 4C3HC 3GTOC 3HOUK 3HOYK 3M3YK 3RZDC 1TWAC 4LJZA 3S1RC 3S1QK 1I50K 5C44K 2YU9C 3M4OK 4QIWL 2A6EA 4A3FC 3GTLC 4A3CK 2B63C 3CQZC 5IYBK 1Y1VC 1SMYA 4YFKA 2PMZL 1TWHC 4XLPA 2WAQL 3HOVC 2NVTC 4C3IK 1BDFA 4BBSK 4XSXA 4A3MC 4BY1K 1TWFC 4A3IK 3RZOK 4A3KC 3S2DC 5IP7K 3K7AC 4BXXC 3S1NK 3S16K 2R7ZC 2JA6K 2E2JC 1TWGK 2PPBA 4Q5SA 4MEYA 1K83K 1YNNA 2NVXC 1TWCK 2NVYK 3HOXC 3GTQK 3GTKC 3GTPK 4YG2A 3S14K 3S17K 1I6HK 4KMUA 4BY7C 5M3FK 4MQ9A 5C3EC 5IP9C 4A3BK 4Y7NC 5C4XC 3I4NK 1SFOC 3S2HK 3PO3C 3I4MC 4QJVA 2Y0SD 4XLNA 5IYCC 2JA5C 4A3GC 4C3HK 3GTOK 4A3EC 3WODA 2JA8C 1TWAK 3S1RK 1R9TK 2R93K 1I6VA 5D4DA 4OIRA 3GTJC 4A93K 4ZH4A 5M5YK 4A3CC 1WCMC 4NOIA 3DXJA 3GTMK 5FLMK 3HOVK 4Y52C 2WB1L 3S1QC 3RZDK 2NVTK 1I50C 4BY1C 4A3MK 3HOWK 3GTGC 4A3KK 5IP7C 4A3FK 3GTLK 3S2DK 3S16C 5IYBC 2B63K 1TWGC 2NVYC 2WB1D 5IYDC 1TWCC 1Y1WC 1XPPA 4G7ZA 3S15C 4QIWD 2A6HA 4A3BC 2E2HC 4C2MC
chains in the Genus database with same CATH superfamily
1ZYRA 2JA8K 2VUMA 2RGRA 2CW0A 4KMDA 1IS1A 4KB4A 2JH3A 1O26A 3TTGA 1XZQA 4G0VA 4A3DK 2YU9A 2W7VA 5FLMC 3S1MC 4QJVB 2PA8L 4WILA 2V6UA 1YNJA 4OIQA 3M3YC 1WQHA 1WQFA 4A93C 3LAJA 4GT9A 3G4AA 2FQTA 1XZQB 2E2IA 4Y52K 4LLGA 4A3LC 2GSUA 4C3IC 1PJ5A 3N0BA 3HOWC 1WCMA 4BXXK 4LK0A 1Y1WK 1EQRA 3S14C 2CFAB 1TWHK 2JA5A 4IOAS 3T02A 3IPJA 3FHZA 3S1NC 1Y1VA 1UV7A 5C4XK 3K7AK 3GTJA 3GTMA 2WAQD 5IYCK 2KPUA 5M3MK 1O27A 5L46A 5CJ9A 1IL2A 3S2HC 1INNA 4OINA 3HOZC 4U67S 3HOUK 3RZDC 1TWAC 1VRQC 1YCLA 3S1QK 3SZYA 4YFKA 4XLPA 2WAQL 3HOVC 4AH6A 3GTQA 2ZJQS 1XZPB 1BDFA 4XSXA 4A3MC 3JSTA 4GTLA 5IP7K 1DCOA 2E2JC 5IYDK 4Q5SA 2ZFZA 1K83K 1V5VA 1YNNA 2NVXC 3H0GA 3V4GA 3HOXC 1EFWA 3S17K 2ZJPS 5EGHA 4KAWX 5HQHA 5C4XC 3CQZA 4BKWA 4XLNA 1O25A 1WQGA 2JA8C 3S1RK 1DCPA 1I6VA 5M5YK 3PIOS 1O24A 1EK8A 5FLMK 3G4CA 3GTGC 4FZBA 2B63K 4WJ4A 2L3UA 4KMAA 2WB1D 1TWCC 2RH6A 5CHPA 4G7ZA 2EBBA 4C2MC 5M5XK 4LK1A 1USMA 3BP3A 2NVXK 1YX2A 4J3NA 2R92C 3HOXK 4C45A 1B4BA 3ADAC 1DD5A 4C3JC 4A3JC 3LPXA 3H0GK 3GTGA 2A69A 4A3GK 5M5WK 5TMCA 4GTDA 3N0CA 5HL7S 3EQLA 3A8JA 1WIHA 2GSOA 1I3QA 2E2HA 4G0WA 1ZXOA 1BJTA 4GFQA 5TMFA 3MMLB 1TWFK 4M1XA 2XCQA 3CQZK 3GIRA 5IOQA 4G0UA 4BBSC 4GZYA 1GE9A 4A3DC 4Y7NK 4KN7A 3GTLA 4KM8A 3PO3K 1I3QC 2O5IA 2JA5K 1K83C 1IBAA 1TWHA 2BE5A 3GTQC 2E2IC 2P5MA 3HKZL 2O5JA 3GTOA 5C4JC 1O2BA 1WCMK 3I4MK 4GTBA 4A3LK 4G7HA 4KC6A 3HOYK 3S1RC 4GTEA 1I50K 5C44K 2YU9C 2P8TA 4IOCS 1B4AA 4BLAA 4A3FC 5IYBK 1Y1VC 1SMYA 3BUEA 2NVTC 3LYWA 4FM9A 1TWFC 4A3IK 3RZOK 4A3KC 3S2DC 1EH1A 4O2DA 2ZUFA 2R7ZC 5JVHS 2PPBA 4MEYA 3AD7C 3GTKC 3GDZA 2Y3PA 1DCHA 4BY7C 4MQ9A 4A3BK 3CF5S 3I4NK 1Y1WA 3OREA 3PO3C 3GEIA 2JA5C 4C3HK 3WODA 1TWAK 4WF9S 5D4DA 4OIRA 3DLLS 4A93K 4ZH4A 1XXAA 2KWAA 1WCMC 4NOIA 4KB2A 3HOVK 3AD9C 1FEUA 2XCOA 3HOWK 5IP7C 3GTLK 3VA7A 3S16C 5IYBC 5IYDC 1C0AA 4WFAS 1Y1WC 2KXYA 3NUHA 3GEHA 3A8KA 4QIWD 1XZPA 1WORA 1O2FB 2PMZD 1R9TA 4KN4A 2R93A 2NVQK 4YFXA 1JOEA 3AQOA 3GTPC 3GTKK 5IORA 5DM6S 4KATA 3OEPA 1PJ6A 1I50A 3BP8C 5IP9K 3FKIC 5E68A 4WFNS 4WFBS 4LR2A 1TWGA 1BGWA 4OIPA 1F9NA 1HQMA 4BBRC 3GTGK 3M4OC 3A8IA 2PA8D 5C4JK 3GTMC 4JK1A 4Q4ZA 2JA7C 2VUMC 1VLOA 3HOYC 4ILDA 2Y0SL 1IW7A 2NVXA 4AYBL 5DM7S 2KQ1A 4C2MK 5C44C 3S0XA 3AH5A 3Q3QA 3T00A 1F7UA 3HKZD 2JA6C 1VJEA 1WSRA 3N3YA 2R92K 3S17C 1L0WA 4PAAA 3H3VL 3S15K 3GEEA 2E2HK 3PO2K 5IOTA 2B63A 2NVQC 1TWCA 4YFNA 1J98A 4A3EK 4XCHA 1I6HC 1O28A 5IOSA 4BY7K 3FKIK 4X6AC 4KMHA 2R7ZA 1IE0A 4C3HC 3M3YK 3LAPA 4LJZA 2GAHC 3M4OK 4BLBA 4QIWL 1JQWA 1VH2A 1BS2A 2B63C 3CQZC 4LQYA 1AB4A 4C3IK 1K83A 4BBSK 4RMFA 1PJ7A 4P5BA 4BXXC 1KQ4A 3S16K 3AD8C 2JA6K 1ZBSA 2NVYK 3S14K 3HXAA 3GTQK 4P9SA 4YG2A 5M3FK 5C3EC 4GTFA 1SFOC 3QX3A 3I4MC 4QJVA 2Y0SD 5IYCC 4A3GC 3GTOK 4A3EC 3FOEA 3GTJC 3CAGA 1EI6A 4A3CC 5JVOA 3ERED 3DXJA 2GSNA 4P5AA 2NVTK 3S1QC 3RZDK 4BY1C 1G51A 4GTAA 4A3KK 3S2DK 1TWGC 3AQPA 1SFOA 1XPPA 4A3BC 4KASA 5JVGS 3FOFA 2E2JK 1I3QK 2L5NA 2E2IK 1WOOA 3PO2C 2A68A 1SFOK 1WSVA 2NVYA 2JA6A 2PHCB 1IQ0A 3GTJK 2YU9K 4X6AK 2D6FC 1F93A 1Y1VK 3T01A 3HOZK 1F7VA 3HOUC 1J6WA 4DDQA 1WOPA 4KDDA 5FJ8K 1USOA 4A3IC 3RZOC 1J6XA 3OPFA 3TFHA 3FKIA 4LOWA 2ZJRS 2R7ZK 1TWAA 4KM9A 4AYBD 4KARA 4MEXA 4IO9S 1XXBA 2XCRB 1RU0A 3I4NC 3S1MK 1O2AA 4OIOA 1ISEA 1ZQ1C 3H3VD 1R9TC 2R93C 4BBRK 1VGXA 3TFIA 4XSZA 4C3JK 4G7OA 4A3JK 3H0GC 2R92A 2JA7K 2VUMK 3GTOC 1HI9A 1XXCA 2A6EA 2GAGC 3GTLC 1ZVUA 4A3CK 5HL8A 2PMZL 1TWHC 3GTPA 2V6TA 4BY1K 3S1NK 3K7AC 3TFJA 1TWGK 1TWCK 3GTPK 3SZZA 2ZUEA 1I6HK 2CFAA 4KMUA 5IP9C 1JVIA 4Y7NC 3GTKA 5EGEA 3S2HK 1J6VA 1R9TK 2R93K 2V6SA 5TJ3A 2JA7A 1X31C 3L4KA 4WCES 1TWFA 4PABA 3GTMK 4WJ3M 5JFEA 4Y52C 3GSIA 2WB1L 3L4JA 1I50C 4A3MK 1O29A 4A3FK 2NVYC 1WOSA 4GTCA 3PIPS 3S15C 5C3EK 2A6HA 2FQOA 2E2HC
chains in the Genus database with same CATH topology
5M5XK 4KN4A 2NVQK 4LK1A 4YFXA 1ZYRA 2E2JK 3GTPC 2NVXK 1I3QK 2R92C 3HOXK 2JA8K 3GTKK 2CW0A 2E2IK 5IP9K 3FKIC 3PO2C 4C3JC 4A3JC 4A3DK 2A68A 1SFOK 3H0GK 5FLMC 2A69A 4A3GK 5IYDK 3S1MC 4QJVB 2PA8L 5M5WK 5TMCA 4OIPA 1YNJA 4OIQA 3M3YC 1HQMA 4BBRC 3GTJK 3GTGK 3EQLA 4A93C 3M4OC 2YU9K 4X6AK 2PA8D 5C4JK 3GTMC 4JK1A 1Y1VK 4Q4ZA 2JA7C 4Y52K 4LLGA 2VUMC 4A3LC 3HOYC 3HOZK 2Y0SL 3HOUC 1IW7A 4C3IC 4AYBL 3HOWC 4C2MK 5C44C 5TMFA 5FJ8K 1TWFK 4A3IC 3RZOC 4BXXK 2PMZD 3CQZK 3HKZD 2JA6C 4LK0A 1Y1WK 2R92K 2R7ZK 3S14C 4AYBD 3S17C 1TWHK 3H3VL 3S15K 4BBSC 4MEXA 4GZYA 2E2HK 3PO2K 2NVQC 4A3DC 3S1NC 4Y7NK 4KN7A 3I4NC 5C4XK 3K7AK 4YFNA 3PO3K 3S1MK 1I3QC 2O5IA 2WAQD 1K83C 4OIOA 5IYCK 5C3EK 2JA5K 4A3EK 2BE5A 3GTQC 3H3VD 2E2IC 1I6HC 1R9TC 2R93C 4BBRK 5M3MK 4BY7K 3FKIK 3HKZL 4XSZA 4X6AC 2O5JA 4G7OA 4C3JK 4A3JK 5C4JC 3H0GC 1WCMK 3S2HC 3I4MK 2JA7K 4OINA 2VUMK 4A3LK 4G7HA 3HOZC 4C3HC 3GTOC 3HOUK 3HOYK 3M3YK 3RZDC 1TWAC 4LJZA 3S1RC 3S1QK 1I50K 5C44K 2YU9C 3M4OK 4QIWL 2A6EA 4A3FC 3GTLC 4A3CK 2B63C 3CQZC 5IYBK 1Y1VC 1SMYA 4YFKA 2PMZL 1TWHC 4XLPA 2WAQL 3HOVC 2NVTC 4C3IK 1BDFA 4BBSK 4XSXA 4A3MC 4BY1K 1TWFC 4A3IK 3RZOK 4A3KC 3S2DC 5IP7K 3K7AC 4BXXC 3S1NK 3S16K 2R7ZC 2JA6K 2E2JC 1TWGK 2PPBA 4Q5SA 4MEYA 1K83K 1YNNA 2NVXC 1TWCK 2NVYK 3HOXC 3GTQK 3GTKC 3GTPK 4YG2A 3S14K 3S17K 1I6HK 4KMUA 4BY7C 5M3FK 4MQ9A 5C3EC 5IP9C 4A3BK 4Y7NC 5C4XC 3I4NK 1SFOC 3S2HK 3PO3C 3I4MC 4QJVA 2Y0SD 4XLNA 5IYCC 2JA5C 4A3GC 4C3HK 3GTOK 4A3EC 3WODA 2JA8C 1TWAK 3S1RK 1R9TK 2R93K 1I6VA 5D4DA 4OIRA 3GTJC 4A93K 4ZH4A 5M5YK 4A3CC 1WCMC 4NOIA 3DXJA 3GTMK 5FLMK 3HOVK 4Y52C 2WB1L 3S1QC 3RZDK 2NVTK 1I50C 4BY1C 4A3MK 3HOWK 3GTGC 4A3KK 5IP7C 4A3FK 3GTLK 3S2DK 3S16C 5IYBC 2B63K 1TWGC 2NVYC 2WB1D 5IYDC 1TWCC 1Y1WC 1XPPA 4G7ZA 3S15C 4QIWD 2A6HA 4A3BC 2E2HC 4C2MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5M5X K;  4KN4 A;  2NVQ K;  4LK1 A;  4YFX A;  1ZYR A;  2E2J K;  3GTP C;  2NVX K;  1I3Q K;  2R92 C;  3HOX K;  2JA8 K;  3GTK K;  2CW0 A;  2E2I K;  5IP9 K;  3FKI C;  3PO2 C;  4C3J C;  4A3J C;  4A3D K;  2A68 A;  1SFO K;  3H0G K;  5FLM C;  2A69 A;  4A3G K;  5IYD K;  3S1M C;  4QJV B;  2PA8 L;  5M5W K;  5TMC A;  4OIP A;  1YNJ A;  4OIQ A;  3M3Y C;  1HQM A;  4BBR C;  3GTJ K;  3GTG K;  3EQL A;  4A93 C;  3M4O C;  2YU9 K;  4X6A K;  2PA8 D;  5C4J K;  3GTM C;  4JK1 A;  1Y1V K;  4Q4Z A;  2JA7 C;  4Y52 K;  4LLG A;  2VUM C;  4A3L C;  3HOY C;  3HOZ K;  2Y0S L;  3HOU C;  1IW7 A;  4C3I C;  4AYB L;  3HOW C;  4C2M K;  5C44 C;  5TMF A;  5FJ8 K;  1TWF K;  4A3I C;  3RZO C;  4BXX K;  2PMZ D;  3CQZ K;  3HKZ D;  2JA6 C;  4LK0 A;  1Y1W K;  2R92 K;  2R7Z K;  3S14 C;  4AYB D;  3S17 C;  1TWH K;  3H3V L;  3S15 K;  4BBS C;  4MEX A;  4GZY A;  2E2H K;  3PO2 K;  2NVQ C;  4A3D C;  3S1N C;  4Y7N K;  4KN7 A;  3I4N C;  5C4X K;  3K7A K;  4YFN A;  3PO3 K;  3S1M K;  1I3Q C;  2O5I A;  2WAQ D;  1K83 C;  4OIO A;  5IYC K;  5C3E K;  2JA5 K;  4A3E K;  2BE5 A;  3GTQ C;  3H3V D;  2E2I C;  1I6H C;  1R9T C;  2R93 C;  4BBR K;  5M3M K;  4BY7 K;  3FKI K;  3HKZ L;  4XSZ A;  4X6A C;  2O5J A;  4G7O A;  4C3J K;  4A3J K;  5C4J C;  3H0G C;  1WCM K;  3S2H C;  3I4M K;  2JA7 K;  4OIN A;  2VUM K;  4A3L K;  4G7H A;  3HOZ C;  4C3H C;  3GTO C;  3HOU K;  3HOY K;  3M3Y K;  3RZD C;  1TWA C;  4LJZ A;  3S1R C;  3S1Q K;  1I50 K;  5C44 K;  2YU9 C;  3M4O K;  4QIW L;  2A6E A;  4A3F C;  3GTL C;  4A3C K;  2B63 C;  3CQZ C;  5IYB K;  1Y1V C;  1SMY A;  4YFK A;  2PMZ L;  1TWH C;  4XLP A;  2WAQ L;  3HOV C;  2NVT C;  4C3I K;  1BDF A;  4BBS K;  4XSX A;  4A3M C;  4BY1 K;  1TWF C;  4A3I K;  3RZO K;  4A3K C;  3S2D C;  5IP7 K;  3K7A C;  4BXX C;  3S1N K;  3S16 K;  2R7Z C;  2JA6 K;  2E2J C;  1TWG K;  2PPB A;  4Q5S A;  4MEY A;  1K83 K;  1YNN A;  2NVX C;  1TWC K;  2NVY K;  3HOX C;  3GTQ K;  3GTK C;  3GTP K;  4YG2 A;  3S14 K;  3S17 K;  1I6H K;  4KMU A;  4BY7 C;  5M3F K;  4MQ9 A;  5C3E C;  5IP9 C;  4A3B K;  4Y7N C;  5C4X C;  3I4N K;  1SFO C;  3S2H K;  3PO3 C;  3I4M C;  4QJV A;  2Y0S D;  4XLN A;  5IYC C;  2JA5 C;  4A3G C;  4C3H K;  3GTO K;  4A3E C;  3WOD A;  2JA8 C;  1TWA K;  3S1R K;  1R9T K;  2R93 K;  1I6V A;  5D4D A;  4OIR A;  3GTJ C;  4A93 K;  4ZH4 A;  5M5Y K;  4A3C C;  1WCM C;  4NOI A;  3DXJ A;  3GTM K;  5FLM K;  3HOV K;  4Y52 C;  2WB1 L;  3S1Q C;  3RZD K;  2NVT K;  1I50 C;  4BY1 C;  4A3M K;  3HOW K;  3GTG C;  4A3K K;  5IP7 C;  4A3F K;  3GTL K;  3S2D K;  3S16 C;  5IYB C;  2B63 K;  1TWG C;  2NVY C;  2WB1 D;  5IYD C;  1TWC C;  1Y1W C;  1XPP A;  4G7Z A;  3S15 C;  4QIW D;  2A6H A;  4A3B C;  2E2H C;  4C2M C; 
#chains in the Genus database with same CATH topology
 1ZYR A;  2JA8 K;  2VUM A;  2RGR A;  2CW0 A;  4KMD A;  1IS1 A;  4KB4 A;  2JH3 A;  1O26 A;  3TTG A;  1XZQ A;  4G0V A;  4A3D K;  2YU9 A;  2W7V A;  5FLM C;  3S1M C;  4QJV B;  2PA8 L;  4WIL A;  2V6U A;  1YNJ A;  4OIQ A;  3M3Y C;  1WQH A;  1WQF A;  4A93 C;  3LAJ A;  4GT9 A;  3G4A A;  2FQT A;  1XZQ B;  2E2I A;  4Y52 K;  4LLG A;  4A3L C;  2GSU A;  4C3I C;  1PJ5 A;  3N0B A;  3HOW C;  1WCM A;  4BXX K;  4LK0 A;  1Y1W K;  1EQR A;  3S14 C;  2CFA B;  1TWH K;  2JA5 A;  4IOA S;  3T02 A;  3IPJ A;  3FHZ A;  3S1N C;  1Y1V A;  1UV7 A;  5C4X K;  3K7A K;  3GTJ A;  3GTM A;  2WAQ D;  5IYC K;  2KPU A;  5M3M K;  1O27 A;  5L46 A;  5CJ9 A;  1IL2 A;  3S2H C;  1INN A;  4OIN A;  3HOZ C;  4U67 S;  3HOU K;  3RZD C;  1TWA C;  1VRQ C;  1YCL A;  3S1Q K;  3SZY A;  4YFK A;  4XLP A;  2WAQ L;  3HOV C;  4AH6 A;  3GTQ A;  2ZJQ S;  1XZP B;  1BDF A;  4XSX A;  4A3M C;  3JST A;  4GTL A;  5IP7 K;  1DCO A;  2E2J C;  5IYD K;  4Q5S A;  2ZFZ A;  1K83 K;  1V5V A;  1YNN A;  2NVX C;  3H0G A;  3V4G A;  3HOX C;  1EFW A;  3S17 K;  2ZJP S;  5EGH A;  4KAW X;  5HQH A;  5C4X C;  3CQZ A;  4BKW A;  4XLN A;  1O25 A;  1WQG A;  2JA8 C;  3S1R K;  1DCP A;  1I6V A;  5M5Y K;  3PIO S;  1O24 A;  1EK8 A;  5FLM K;  3G4C A;  3GTG C;  4FZB A;  2B63 K;  4WJ4 A;  2L3U A;  4KMA A;  2WB1 D;  1TWC C;  2RH6 A;  5CHP A;  4G7Z A;  2EBB A;  4C2M C;  5M5X K;  4LK1 A;  1USM A;  3BP3 A;  2NVX K;  1YX2 A;  4J3N A;  2R92 C;  3HOX K;  4C45 A;  1B4B A;  3ADA C;  1DD5 A;  4C3J C;  4A3J C;  3LPX A;  3H0G K;  3GTG A;  2A69 A;  4A3G K;  5M5W K;  5TMC A;  4GTD A;  3N0C A;  5HL7 S;  3EQL A;  3A8J A;  1WIH A;  2GSO A;  1I3Q A;  2E2H A;  4G0W A;  1ZXO A;  1BJT A;  4GFQ A;  5TMF A;  3MML B;  1TWF K;  4M1X A;  2XCQ A;  3CQZ K;  3GIR A;  5IOQ A;  4G0U A;  4BBS C;  4GZY A;  1GE9 A;  4A3D C;  4Y7N K;  4KN7 A;  3GTL A;  4KM8 A;  3PO3 K;  1I3Q C;  2O5I A;  2JA5 K;  1K83 C;  1IBA A;  1TWH A;  2BE5 A;  3GTQ C;  2E2I C;  2P5M A;  3HKZ L;  2O5J A;  3GTO A;  5C4J C;  1O2B A;  1WCM K;  3I4M K;  4GTB A;  4A3L K;  4G7H A;  4KC6 A;  3HOY K;  3S1R C;  4GTE A;  1I50 K;  5C44 K;  2YU9 C;  2P8T A;  4IOC S;  1B4A A;  4BLA A;  4A3F C;  5IYB K;  1Y1V C;  1SMY A;  3BUE A;  2NVT C;  3LYW A;  4FM9 A;  1TWF C;  4A3I K;  3RZO K;  4A3K C;  3S2D C;  1EH1 A;  4O2D A;  2ZUF A;  2R7Z C;  5JVH S;  2PPB A;  4MEY A;  3AD7 C;  3GTK C;  3GDZ A;  2Y3P A;  1DCH A;  4BY7 C;  4MQ9 A;  4A3B K;  3CF5 S;  3I4N K;  1Y1W A;  3ORE A;  3PO3 C;  3GEI A;  2JA5 C;  4C3H K;  3WOD A;  1TWA K;  4WF9 S;  5D4D A;  4OIR A;  3DLL S;  4A93 K;  4ZH4 A;  1XXA A;  2KWA A;  1WCM C;  4NOI A;  4KB2 A;  3HOV K;  3AD9 C;  1FEU A;  2XCO A;  3HOW K;  5IP7 C;  3GTL K;  3VA7 A;  3S16 C;  5IYB C;  5IYD C;  1C0A A;  4WFA S;  1Y1W C;  2KXY A;  3NUH A;  3GEH A;  3A8K A;  4QIW D;  1XZP A;  1WOR A;  1O2F B;  2PMZ D;  1R9T A;  4KN4 A;  2R93 A;  2NVQ K;  4YFX A;  1JOE A;  3AQO A;  3GTP C;  3GTK K;  5IOR A;  5DM6 S;  4KAT A;  3OEP A;  1PJ6 A;  1I50 A;  3BP8 C;  5IP9 K;  3FKI C;  5E68 A;  4WFN S;  4WFB S;  4LR2 A;  1TWG A;  1BGW A;  4OIP A;  1F9N A;  1HQM A;  4BBR C;  3GTG K;  3M4O C;  3A8I A;  2PA8 D;  5C4J K;  3GTM C;  4JK1 A;  4Q4Z A;  2JA7 C;  2VUM C;  1VLO A;  3HOY C;  4ILD A;  2Y0S L;  1IW7 A;  2NVX A;  4AYB L;  5DM7 S;  2KQ1 A;  4C2M K;  5C44 C;  3S0X A;  3AH5 A;  3Q3Q A;  3T00 A;  1F7U A;  3HKZ D;  2JA6 C;  1VJE A;  1WSR A;  3N3Y A;  2R92 K;  3S17 C;  1L0W A;  4PAA A;  3H3V L;  3S15 K;  3GEE A;  2E2H K;  3PO2 K;  5IOT A;  2B63 A;  2NVQ C;  1TWC A;  4YFN A;  1J98 A;  4A3E K;  4XCH A;  1I6H C;  1O28 A;  5IOS A;  4BY7 K;  3FKI K;  4X6A C;  4KMH A;  2R7Z A;  1IE0 A;  4C3H C;  3M3Y K;  3LAP A;  4LJZ A;  2GAH C;  3M4O K;  4BLB A;  4QIW L;  1JQW A;  1VH2 A;  1BS2 A;  2B63 C;  3CQZ C;  4LQY A;  1AB4 A;  4C3I K;  1K83 A;  4BBS K;  4RMF A;  1PJ7 A;  4P5B A;  4BXX C;  1KQ4 A;  3S16 K;  3AD8 C;  2JA6 K;  1ZBS A;  2NVY K;  3S14 K;  3HXA A;  3GTQ K;  4P9S A;  4YG2 A;  5M3F K;  5C3E C;  4GTF A;  1SFO C;  3QX3 A;  3I4M C;  4QJV A;  2Y0S D;  5IYC C;  4A3G C;  3GTO K;  4A3E C;  3FOE A;  3GTJ C;  3CAG A;  1EI6 A;  4A3C C;  5JVO A;  3ERE D;  3DXJ A;  2GSN A;  4P5A A;  2NVT K;  3S1Q C;  3RZD K;  4BY1 C;  1G51 A;  4GTA A;  4A3K K;  3S2D K;  1TWG C;  3AQP A;  1SFO A;  1XPP A;  4A3B C;  4KAS A;  5JVG S;  3FOF A;  2E2J K;  1I3Q K;  2L5N A;  2E2I K;  1WOO A;  3PO2 C;  2A68 A;  1SFO K;  1WSV A;  2NVY A;  2JA6 A;  2PHC B;  1IQ0 A;  3GTJ K;  2YU9 K;  4X6A K;  2D6F C;  1F93 A;  1Y1V K;  3T01 A;  3HOZ K;  1F7V A;  3HOU C;  1J6W A;  4DDQ A;  1WOP A;  4KDD A;  5FJ8 K;  1USO A;  4A3I C;  3RZO C;  1J6X A;  3OPF A;  3TFH A;  3FKI A;  4LOW A;  2ZJR S;  2R7Z K;  1TWA A;  4KM9 A;  4AYB D;  4KAR A;  4MEX A;  4IO9 S;  1XXB A;  2XCR B;  1RU0 A;  3I4N C;  3S1M K;  1O2A A;  4OIO A;  1ISE A;  1ZQ1 C;  3H3V D;  1R9T C;  2R93 C;  4BBR K;  1VGX A;  3TFI A;  4XSZ A;  4C3J K;  4G7O A;  4A3J K;  3H0G C;  2R92 A;  2JA7 K;  2VUM K;  3GTO C;  1HI9 A;  1XXC A;  2A6E A;  2GAG C;  3GTL C;  1ZVU A;  4A3C K;  5HL8 A;  2PMZ L;  1TWH C;  3GTP A;  2V6T A;  4BY1 K;  3S1N K;  3K7A C;  3TFJ A;  1TWG K;  1TWC K;  3GTP K;  3SZZ A;  2ZUE A;  1I6H K;  2CFA A;  4KMU A;  5IP9 C;  1JVI A;  4Y7N C;  3GTK A;  5EGE A;  3S2H K;  1J6V A;  1R9T K;  2R93 K;  2V6S A;  5TJ3 A;  2JA7 A;  1X31 C;  3L4K A;  4WCE S;  1TWF A;  4PAB A;  3GTM K;  4WJ3 M;  5JFE A;  4Y52 C;  3GSI A;  2WB1 L;  3L4J A;  1I50 C;  4A3M K;  1O29 A;  4A3F K;  2NVY C;  1WOS A;  4GTC A;  3PIP S;  3S15 C;  5C3E K;  2A6H A;  2FQO A;  2E2H C; 
#chains in the Genus database with same CATH homology
 5M5X K;  4KN4 A;  2NVQ K;  4LK1 A;  4YFX A;  1ZYR A;  2E2J K;  3GTP C;  2NVX K;  1I3Q K;  2R92 C;  3HOX K;  2JA8 K;  3GTK K;  2CW0 A;  2E2I K;  5IP9 K;  3FKI C;  3PO2 C;  4C3J C;  4A3J C;  4A3D K;  2A68 A;  1SFO K;  3H0G K;  5FLM C;  2A69 A;  4A3G K;  5IYD K;  3S1M C;  4QJV B;  2PA8 L;  5M5W K;  5TMC A;  4OIP A;  1YNJ A;  4OIQ A;  3M3Y C;  1HQM A;  4BBR C;  3GTJ K;  3GTG K;  3EQL A;  4A93 C;  3M4O C;  2YU9 K;  4X6A K;  2PA8 D;  5C4J K;  3GTM C;  4JK1 A;  1Y1V K;  4Q4Z A;  2JA7 C;  4Y52 K;  4LLG A;  2VUM C;  4A3L C;  3HOY C;  3HOZ K;  2Y0S L;  3HOU C;  1IW7 A;  4C3I C;  4AYB L;  3HOW C;  4C2M K;  5C44 C;  5TMF A;  5FJ8 K;  1TWF K;  4A3I C;  3RZO C;  4BXX K;  2PMZ D;  3CQZ K;  3HKZ D;  2JA6 C;  4LK0 A;  1Y1W K;  2R92 K;  2R7Z K;  3S14 C;  4AYB D;  3S17 C;  1TWH K;  3H3V L;  3S15 K;  4BBS C;  4MEX A;  4GZY A;  2E2H K;  3PO2 K;  2NVQ C;  4A3D C;  3S1N C;  4Y7N K;  4KN7 A;  3I4N C;  5C4X K;  3K7A K;  4YFN A;  3PO3 K;  3S1M K;  1I3Q C;  2O5I A;  2WAQ D;  1K83 C;  4OIO A;  5IYC K;  5C3E K;  2JA5 K;  4A3E K;  2BE5 A;  3GTQ C;  3H3V D;  2E2I C;  1I6H C;  1R9T C;  2R93 C;  4BBR K;  5M3M K;  4BY7 K;  3FKI K;  3HKZ L;  4XSZ A;  4X6A C;  2O5J A;  4G7O A;  4C3J K;  4A3J K;  5C4J C;  3H0G C;  1WCM K;  3S2H C;  3I4M K;  2JA7 K;  4OIN A;  2VUM K;  4A3L K;  4G7H A;  3HOZ C;  4C3H C;  3GTO C;  3HOU K;  3HOY K;  3M3Y K;  3RZD C;  1TWA C;  4LJZ A;  3S1R C;  3S1Q K;  1I50 K;  5C44 K;  2YU9 C;  3M4O K;  4QIW L;  2A6E A;  4A3F C;  3GTL C;  4A3C K;  2B63 C;  3CQZ C;  5IYB K;  1Y1V C;  1SMY A;  4YFK A;  2PMZ L;  1TWH C;  4XLP A;  2WAQ L;  3HOV C;  2NVT C;  4C3I K;  1BDF A;  4BBS K;  4XSX A;  4A3M C;  4BY1 K;  1TWF C;  4A3I K;  3RZO K;  4A3K C;  3S2D C;  5IP7 K;  3K7A C;  4BXX C;  3S1N K;  3S16 K;  2R7Z C;  2JA6 K;  2E2J C;  1TWG K;  2PPB A;  4Q5S A;  4MEY A;  1K83 K;  1YNN A;  2NVX C;  1TWC K;  2NVY K;  3HOX C;  3GTQ K;  3GTK C;  3GTP K;  4YG2 A;  3S14 K;  3S17 K;  1I6H K;  4KMU A;  4BY7 C;  5M3F K;  4MQ9 A;  5C3E C;  5IP9 C;  4A3B K;  4Y7N C;  5C4X C;  3I4N K;  1SFO C;  3S2H K;  3PO3 C;  3I4M C;  4QJV A;  2Y0S D;  4XLN A;  5IYC C;  2JA5 C;  4A3G C;  4C3H K;  3GTO K;  4A3E C;  3WOD A;  2JA8 C;  1TWA K;  3S1R K;  1R9T K;  2R93 K;  1I6V A;  5D4D A;  4OIR A;  3GTJ C;  4A93 K;  4ZH4 A;  5M5Y K;  4A3C C;  1WCM C;  4NOI A;  3DXJ A;  3GTM K;  5FLM K;  3HOV K;  4Y52 C;  2WB1 L;  3S1Q C;  3RZD K;  2NVT K;  1I50 C;  4BY1 C;  4A3M K;  3HOW K;  3GTG C;  4A3K K;  5IP7 C;  4A3F K;  3GTL K;  3S2D K;  3S16 C;  5IYB C;  2B63 K;  1TWG C;  2NVY C;  2WB1 D;  5IYD C;  1TWC C;  1Y1W C;  1XPP A;  4G7Z A;  3S15 C;  4QIW D;  2A6H A;  4A3B C;  2E2H C;  4C2M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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