3GTOC

Backtracked rna polymerase ii complex with 15mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 41
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtoC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtoC01
4BY1C 3GTPK 3HOVK 2PMZL 4A3MC 4Y52K 3DXJA 5IP9C 3S14C 1TWCK 4C3HC 2PA8D 1K83K 4BY7K 2PMZD 1R9TK 4QJVB 2NVXK 3S15K 4A3KC 4Q4ZA 5C4JC 4YFXA 3K7AK 4BBSC 3CQZK 3RZDK 2CW0A 1TWAK 1R9TC 4YFKA 3HKZL 4A93K 5D4DA 1TWGC 4OIPA 3GTMK 5IYCK 1SFOK 1I6VA 4C3IK 2E2IK 2B63K 5C4JK 4BY1K 2NVQK 2JA5C 4Y52C 3S2HK 3GTJK 3RZDC 2NVTC 2A69A 4ZH4A 3GTLK 2NVXC 4JK1A 4C3JC 4G7OA 5M3FK 1Y1WC 3HOZK 3FKIC 5FLMC 3PO3C 2Y0SL 4BXXC 4LJZA 1Y1VC 4C2MC 4KN7A 1TWAC 3GTLC 3GTMC 3H0GK 3WODA 3GTKC 3EQLA 2JA7C 2VUMK 5IP7C 2O5JA 3S1RK 4QJVA 3GTOK 2JA5K 3PO3K 3S17C 2R93C 3GTJC 4A3MK 3RZOK 3S16C 1IW7A 4KMUA 4Q5SA 2O5IA 4AYBL 4OIRA 4KN4A 1I6HC 4A3DK 3HOZC 3S15C 1Y1WK 3S2DK 1XPPA 3HOXK 2VUMC 2JA7K 4Y7NK 4OIQA 4LLGA 4BXXK 3I4MC 2PA8L 3CQZC 3I4NC 1I3QC 3S1NC 3S16K 3M3YK 3M4OK 5TMCA 1TWGK 4A3JK 2R92C 3S1RC 3GTOC 4BBRK 1YNJA 2A68A 4OIOA 4G7ZA 4A3CC 5C4XK 2JA6K 3HKZD 4QIWL 1I6HK 2WAQL 4BY7C 4A3BK 2R7ZC 4G7HA 3HOXC 3M4OC 4A3LC 3S1MC 4GZYA 2A6HA 3S1QK 4LK0A 5M5YK 4BBSK 2A6EA 1WCMC 3HOYK 1I3QK 3S1NK 1K83C 2YU9C 4C3HK 3HOWK 3M3YC 2JA8K 4MEXA 2R7ZK 2R92K 4A3LK 3H3VL 1TWHC 3GTGC 4A3FK 2NVQC 3PO2C 1WCMK 3RZOC 2NVYK 5M5WK 3GTQK 4NOIA 4LK1A 4A3DC 2BE5A 3HOUC 1BDFA 2WB1L 4C3IC 2B63C 4X6AK 3S1QC 3FKIK 5FLMK 2E2JC 4MEYA 4A3FC 3HOYC 4XSZA 4YG2A 4AYBD 5IYBC 3HOWC 2PPBA 4C2MK 4YFNA 4OINA 5IYDC 5M3MK 2NVTK 4XLNA 1SMYA 4C3JK 2E2HC 5C3EC 2WAQD 4A3JC 3GTGK 3GTKK 4A3GK 2E2JK 3PO2K 4A3CK 5TMFA 1Y1VK 1TWFC 5IYBK 4XLPA 3HOUK 4A93C 5C3EK 3S1MK 5IP7K 1SFOC 2E2IC 1I50K 4Y7NC 3S17K 2R93K 1HQMA 4A3EC 4A3GC 4MQ9A 4A3IK 3S2HC 3HOVC 2Y0SD 1TWFK 5M5XK 2YU9K 3I4NK 5IYDK 1TWCC 1YNNA 2E2HK 2JA8C 3S2DC 1TWHK 4A3KK 5C44C 1I50C 3I4MK 4XSXA 3K7AC 3GTPC 4A3IC 4A3EK 2WB1D 2JA6C 5C4XC 5IP9K 3S14K 2NVYC 3GTQC 3H3VD 1ZYRA 5FJ8K 4A3BC 3H0GC 4X6AC 4BBRC 4QIWD 5IYCC 5C44K
chains in the Genus database with same CATH superfamily
5EGEA 5HQHA 3GTPK 5CHPA 3DXJA 5IP9C 3S14C 2GAGC 2PA8D 2PMZD 1R9TK 5HL8A 1EFWA 4A3KC 1J6WA 5C4JC 4YFXA 1Y1WA 4BBSC 2NVYA 1WSVA 1R9TC 4RMFA 5D4DA 1EQRA 2KWAA 3NUHA 5C4JK 1AB4A 2JA5C 1O25A 4DDQA 3L4JA 2KQ1A 2NVTC 3GTLK 2V6TA 2RH6A 3FKIC 3PO3C 4BXXC 3AH5A 3A8IA 5JVGS 4KN7A 3H0GK 3GTKA 1RU0A 3S1RK 4QJVA 3PO3K 2R93C 1Y1VA 3GTJC 3S16C 1IW7A 4Y7NK 1F7UA 2D6FC 1ZXOA 1TWFA 3CQZC 5DM6S 3LYWA 3S16K 2ZFZA 1J6VA 1DCOA 3ERED 2R92C 2KXYA 3GTOC 1F7VA 1DCPA 4G7ZA 3JSTA 5C4XK 2JA6K 4U67S 4BY7C 2WAQL 3M4OC 1O2AA 1O29A 4O2DA 3S1MC 2A6HA 4LQYA 2YU9C 4GTBA 2JA8K 4A3LK 2B63A 4A3FK 4BKWA 1B4BA 1JQWA 1F93A 3A8KA 3HOUC 1XZQB 4KDDA 3S1QC 5FLMK 2E2JC 3HOYC 4IOCS 5IORA 3GIRA 1WORA 5M3MK 2NVTK 3PIPS 3SZYA 2L5NA 2E2HC 3GTKK 2JA6A 5IOSA 4XCHA 2ZJRS 2JH3A 1TWFC 1WOPA 1IS1A 1SFOA 5IOQA 5JVHS 1TWFK 1YNNA 2JA7A 1TWHK 1B4AA 4A3KK 3K7AC 1ISEA 4A3IC 4A3EK 1O28A 2NVYC 4J3NA 5FJ8K 4KM9A 1L0WA 4X6AC 4BY1C 3HOVK 2JA5A 1USMA 4QJVB 1YX2A 1IL2A 3T02A 2XCOA 3CQZK 3TFHA 1WCMA 3RZDK 1X31C 1TWAK 3HKZL 4OIPA 3GTMK 1WSRA 5IYCK 2NVQK 2GSUA 3S2HK 4G0VA 3GTJK 2A69A 2NVXC 1EI6A 5M3FK 1WQFA 4GTDA 2GSNA 1VGXA 4FZBA 1HI9A 3GEHA 4PABA 3N0CA 2RGRA 3GTKC 2JA7C 3OPFA 2O5JA 1BGWA 4FM9A 4Q5SA 4KMUA 4OIRA 1I6HC 3S15C 1I50A 4OIQA 3CQZA 1TWAA 3I4NC 3GTMA 1INNA 2FQTA 3M3YK 1G51A 1WIHA 1DD5A 5EGHA 4BBRK 2PHCB 4GTAA 1XXCA 4QIWL 4G7HA 2XCRB 1WQHA 4LK0A 1PJ6A 5M5YK 3T01A 3HOYK 1K83C 4C3HK 4WJ3M 1R9TA 3A8JA 1BS2A 4MEXA 4KARA 3LAPA 2R92K 3H3VL 1TWHC 1IE0A 5M5WK 3GTQK 2L3UA 4NOIA 4A3DC 3CF5S 2BE5A 4WCES 2WB1L 3TTGA 1XZQA 3FOFA 3HOWC 4YFNA 4OINA 3TFJA 5C3EC 5L46A 3AD8C 5TMFA 1IQ0A 4XLPA 3AQOA 3HOUK 1JVIA 3S1MK 3LAJA 1SFOC 1HQMA 2E2IA 3HOVC 2KPUA 4GTFA 5IYDK 2E2HK 2JA8C 3CAGA 4P5BA 1XXAA 5C44C 2XCQA 4KC6A 3GTLA 3GTPC 2WB1D 2JA6C 5C4XC 5IP9K 3S14K 3VA7A 2GAHC 3H3VD 5C44K 4GTCA 2PMZL 1TWCK 4G0UA 3S15K 2NVXK 1ZBSA 2R7ZA 1USOA 1XXBA 3K7AK 4KB2A 4G0WA 2CW0A 3GTQA 3OREA 1O24A 1WOOA 4C3IK 2E2IK 4WFNS 2B63K 4BY1K 1WQGA 1TWGA 3GEEA 4Y52C 4ZH4A 4PAAA 3PIOS 3G4AA 2GSOA 2Y0SL 1EK8A 1Y1VC 1O2FB 1TWAC 3GTLC 3GTMC 3WODA 2VUMK 5IP7C 1TWCA 4A3MK 3IPJA 3RZOK 2O5IA 4AYBL 1ZQ1C 4KN4A 4A3DK 3HOZC 1Y1WK 3HOXK 3QX3A 2VUMC 2R93A 3FHZA 4C45A 4GTLA 2PA8L 1PJ7A 3BP8C 1I3QC 4LR2A 3M4OK 3N3YA 1TWGK 1FEUA 2W7VA 4ILDA 2V6UA 3S0XA 1VH2A 3HKZD 5DM7S 3AD7C 1I6HK 4A3LC 4GZYA 1IBAA 2A6EA 1WCMC 3S1NK 3HOWK 3M3YC 3GTGC 2NVQC 4LOWA 3PO2C 1WCMK 4GT9A 4WFBS 4C3IC 2B63C 4MEYA 4A3FC 4YG2A 5IYBC 3AQPA 2PPBA 4C2MK 5IYDC 2ZJQS 1VLOA 4A3JC 1JOEA 4WILA 4KMAA 2E2JK 3SZZA 4A3CK 1Y1VK 5IYBK 3FOEA 5IP7K 2E2IC 3GTOA 1C0AA 1O27A 3OEPA 2R93K 4A3EC 4A3IK 4MQ9A 2Y0SD 3I4NK 4GFQA 1TWCC 3LPXA 5HL7S 3DLLS 5JFEA 3GTQC 4WJ4A 4A3BC 2EBBA 3H0GC 1DCHA 4A3MC 4Y52K 4C3HC 1K83K 4BY7K 4Q4ZA 1VRQC 4IOAS 4YFKA 4A93K 2R92A 1TWGC 5TJ3A 3MMLB 1SFOK 1I6VA 1EH1A 3AD9C 2ZJPS 1BJTA 1XZPB 3RZDC 1TWHA 4M1XA 4JK1A 4C3JC 4G7OA 2ZUEA 1Y1WC 3HOZK 4KASA 5FLMC 1YCLA 4KAWX 4BLAA 1V5VA 4LJZA 1O26A 4C2MC 3TFIA 4KB4A 1I3QA 3EQLA 1WOSA 4BLBA 3GTOK 2JA5K 3S17C 1XZPA 2V6SA 4AH6A 1J6XA 3BUEA 5JVOA 3S2DK 1XPPA 2JA7K 4LLGA 4BXXK 3I4MC 3S1NC 2E2HA 5TMCA 1ZVUA 4A3JK 3S1RC 1UV7A 1YNJA 2A68A 3GTJA 3GTGA 4OIOA 4A3CC 2ZUFA 4GTEA 1K83A 4A3BK 3Q3QA 2R7ZC 2P8TA 3HOXC 3ADAC 3S1QK 3N0BA 4BBSK 1J98A 1I3QK 3GDZA 5CJ9A 2NVXA 2R7ZK 2YU9A 2CFAA 4WF9S 3RZOC 3GEIA 2NVYK 4LK1A 1BDFA 2P5MA 4X6AK 3FKIK 1O2BA 1VJEA 4KMDA 4XSZA 4AYBD 3GTPA 2FQOA 1SMYA 4XLNA 4C3JK 1F9NA 4P5AA 2WAQD 3L4KA 3GTGK 2CFAB 3GSIA 4A3GK 3PO2K 4KMHA 3H0GA 4A93C 2VUMA 5C3EK 1I50K 1GE9A 4Y7NC 3S17K 3G4CA 4A3GC 3S2HC 4KM8A 5M5XK 2YU9K 3HXAA 5E68A 4IO9S 3S2DC 5IOTA 4WFAS 4KATA 1I50C 3I4MK 4XSXA 4P9SA 3V4GA 3T00A 1PJ5A 1ZYRA 3BP3A 1KQ4A 3FKIA 4BBRC 4QIWD 5IYCC 2Y3PA
chains in the Genus database with same CATH topology
4BY1C 3GTPK 3HOVK 2PMZL 4A3MC 4Y52K 3DXJA 5IP9C 3S14C 1TWCK 4C3HC 2PA8D 1K83K 4BY7K 2PMZD 1R9TK 4QJVB 2NVXK 3S15K 4A3KC 4Q4ZA 5C4JC 4YFXA 3K7AK 4BBSC 3CQZK 3RZDK 2CW0A 1TWAK 1R9TC 4YFKA 3HKZL 4A93K 5D4DA 1TWGC 4OIPA 3GTMK 5IYCK 1SFOK 1I6VA 4C3IK 2E2IK 2B63K 5C4JK 4BY1K 2NVQK 2JA5C 4Y52C 3S2HK 3GTJK 3RZDC 2NVTC 2A69A 4ZH4A 3GTLK 2NVXC 4JK1A 4C3JC 4G7OA 5M3FK 1Y1WC 3HOZK 3FKIC 5FLMC 3PO3C 2Y0SL 4BXXC 4LJZA 1Y1VC 4C2MC 4KN7A 1TWAC 3GTLC 3GTMC 3H0GK 3WODA 3GTKC 3EQLA 2JA7C 2VUMK 5IP7C 2O5JA 3S1RK 4QJVA 3GTOK 2JA5K 3PO3K 3S17C 2R93C 3GTJC 4A3MK 3RZOK 3S16C 1IW7A 4KMUA 4Q5SA 2O5IA 4AYBL 4OIRA 4KN4A 1I6HC 4A3DK 3HOZC 3S15C 1Y1WK 3S2DK 1XPPA 3HOXK 2VUMC 2JA7K 4Y7NK 4OIQA 4LLGA 4BXXK 3I4MC 2PA8L 3CQZC 3I4NC 1I3QC 3S1NC 3S16K 3M3YK 3M4OK 5TMCA 1TWGK 4A3JK 2R92C 3S1RC 3GTOC 4BBRK 1YNJA 2A68A 4OIOA 4G7ZA 4A3CC 5C4XK 2JA6K 3HKZD 4QIWL 1I6HK 2WAQL 4BY7C 4A3BK 2R7ZC 4G7HA 3HOXC 3M4OC 4A3LC 3S1MC 4GZYA 2A6HA 3S1QK 4LK0A 5M5YK 4BBSK 2A6EA 1WCMC 3HOYK 1I3QK 3S1NK 1K83C 2YU9C 4C3HK 3HOWK 3M3YC 2JA8K 4MEXA 2R7ZK 2R92K 4A3LK 3H3VL 1TWHC 3GTGC 4A3FK 2NVQC 3PO2C 1WCMK 3RZOC 2NVYK 5M5WK 3GTQK 4NOIA 4LK1A 4A3DC 2BE5A 3HOUC 1BDFA 2WB1L 4C3IC 2B63C 4X6AK 3S1QC 3FKIK 5FLMK 2E2JC 4MEYA 4A3FC 3HOYC 4XSZA 4YG2A 4AYBD 5IYBC 3HOWC 2PPBA 4C2MK 4YFNA 4OINA 5IYDC 5M3MK 2NVTK 4XLNA 1SMYA 4C3JK 2E2HC 5C3EC 2WAQD 4A3JC 3GTGK 3GTKK 4A3GK 2E2JK 3PO2K 4A3CK 5TMFA 1Y1VK 1TWFC 5IYBK 4XLPA 3HOUK 4A93C 5C3EK 3S1MK 5IP7K 1SFOC 2E2IC 1I50K 4Y7NC 3S17K 2R93K 1HQMA 4A3EC 4A3GC 4MQ9A 4A3IK 3S2HC 3HOVC 2Y0SD 1TWFK 5M5XK 2YU9K 3I4NK 5IYDK 1TWCC 1YNNA 2E2HK 2JA8C 3S2DC 1TWHK 4A3KK 5C44C 1I50C 3I4MK 4XSXA 3K7AC 3GTPC 4A3IC 4A3EK 2WB1D 2JA6C 5C4XC 5IP9K 3S14K 2NVYC 3GTQC 3H3VD 1ZYRA 5FJ8K 4A3BC 3H0GC 4X6AC 4BBRC 4QIWD 5IYCC 5C44K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BY1 C;  3GTP K;  3HOV K;  2PMZ L;  4A3M C;  4Y52 K;  3DXJ A;  5IP9 C;  3S14 C;  1TWC K;  4C3H C;  2PA8 D;  1K83 K;  4BY7 K;  2PMZ D;  1R9T K;  4QJV B;  2NVX K;  3S15 K;  4A3K C;  4Q4Z A;  5C4J C;  4YFX A;  3K7A K;  4BBS C;  3CQZ K;  3RZD K;  2CW0 A;  1TWA K;  1R9T C;  4YFK A;  3HKZ L;  4A93 K;  5D4D A;  1TWG C;  4OIP A;  3GTM K;  5IYC K;  1SFO K;  1I6V A;  4C3I K;  2E2I K;  2B63 K;  5C4J K;  4BY1 K;  2NVQ K;  2JA5 C;  4Y52 C;  3S2H K;  3GTJ K;  3RZD C;  2NVT C;  2A69 A;  4ZH4 A;  3GTL K;  2NVX C;  4JK1 A;  4C3J C;  4G7O A;  5M3F K;  1Y1W C;  3HOZ K;  3FKI C;  5FLM C;  3PO3 C;  2Y0S L;  4BXX C;  4LJZ A;  1Y1V C;  4C2M C;  4KN7 A;  1TWA C;  3GTL C;  3GTM C;  3H0G K;  3WOD A;  3GTK C;  3EQL A;  2JA7 C;  2VUM K;  5IP7 C;  2O5J A;  3S1R K;  4QJV A;  3GTO K;  2JA5 K;  3PO3 K;  3S17 C;  2R93 C;  3GTJ C;  4A3M K;  3RZO K;  3S16 C;  1IW7 A;  4KMU A;  4Q5S A;  2O5I A;  4AYB L;  4OIR A;  4KN4 A;  1I6H C;  4A3D K;  3HOZ C;  3S15 C;  1Y1W K;  3S2D K;  1XPP A;  3HOX K;  2VUM C;  2JA7 K;  4Y7N K;  4OIQ A;  4LLG A;  4BXX K;  3I4M C;  2PA8 L;  3CQZ C;  3I4N C;  1I3Q C;  3S1N C;  3S16 K;  3M3Y K;  3M4O K;  5TMC A;  1TWG K;  4A3J K;  2R92 C;  3S1R C;  3GTO C;  4BBR K;  1YNJ A;  2A68 A;  4OIO A;  4G7Z A;  4A3C C;  5C4X K;  2JA6 K;  3HKZ D;  4QIW L;  1I6H K;  2WAQ L;  4BY7 C;  4A3B K;  2R7Z C;  4G7H A;  3HOX C;  3M4O C;  4A3L C;  3S1M C;  4GZY A;  2A6H A;  3S1Q K;  4LK0 A;  5M5Y K;  4BBS K;  2A6E A;  1WCM C;  3HOY K;  1I3Q K;  3S1N K;  1K83 C;  2YU9 C;  4C3H K;  3HOW K;  3M3Y C;  2JA8 K;  4MEX A;  2R7Z K;  2R92 K;  4A3L K;  3H3V L;  1TWH C;  3GTG C;  4A3F K;  2NVQ C;  3PO2 C;  1WCM K;  3RZO C;  2NVY K;  5M5W K;  3GTQ K;  4NOI A;  4LK1 A;  4A3D C;  2BE5 A;  3HOU C;  1BDF A;  2WB1 L;  4C3I C;  2B63 C;  4X6A K;  3S1Q C;  3FKI K;  5FLM K;  2E2J C;  4MEY A;  4A3F C;  3HOY C;  4XSZ A;  4YG2 A;  4AYB D;  5IYB C;  3HOW C;  2PPB A;  4C2M K;  4YFN A;  4OIN A;  5IYD C;  5M3M K;  2NVT K;  4XLN A;  1SMY A;  4C3J K;  2E2H C;  5C3E C;  2WAQ D;  4A3J C;  3GTG K;  3GTK K;  4A3G K;  2E2J K;  3PO2 K;  4A3C K;  5TMF A;  1Y1V K;  1TWF C;  5IYB K;  4XLP A;  3HOU K;  4A93 C;  5C3E K;  3S1M K;  5IP7 K;  1SFO C;  2E2I C;  1I50 K;  4Y7N C;  3S17 K;  2R93 K;  1HQM A;  4A3E C;  4A3G C;  4MQ9 A;  4A3I K;  3S2H C;  3HOV C;  2Y0S D;  1TWF K;  5M5X K;  2YU9 K;  3I4N K;  5IYD K;  1TWC C;  1YNN A;  2E2H K;  2JA8 C;  3S2D C;  1TWH K;  4A3K K;  5C44 C;  1I50 C;  3I4M K;  4XSX A;  3K7A C;  3GTP C;  4A3I C;  4A3E K;  2WB1 D;  2JA6 C;  5C4X C;  5IP9 K;  3S14 K;  2NVY C;  3GTQ C;  3H3V D;  1ZYR A;  5FJ8 K;  4A3B C;  3H0G C;  4X6A C;  4BBR C;  4QIW D;  5IYC C;  5C44 K; 
#chains in the Genus database with same CATH topology
 5EGE A;  5HQH A;  3GTP K;  5CHP A;  3DXJ A;  5IP9 C;  3S14 C;  2GAG C;  2PA8 D;  2PMZ D;  1R9T K;  5HL8 A;  1EFW A;  4A3K C;  1J6W A;  5C4J C;  4YFX A;  1Y1W A;  4BBS C;  2NVY A;  1WSV A;  1R9T C;  4RMF A;  5D4D A;  1EQR A;  2KWA A;  3NUH A;  5C4J K;  1AB4 A;  2JA5 C;  1O25 A;  4DDQ A;  3L4J A;  2KQ1 A;  2NVT C;  3GTL K;  2V6T A;  2RH6 A;  3FKI C;  3PO3 C;  4BXX C;  3AH5 A;  3A8I A;  5JVG S;  4KN7 A;  3H0G K;  3GTK A;  1RU0 A;  3S1R K;  4QJV A;  3PO3 K;  2R93 C;  1Y1V A;  3GTJ C;  3S16 C;  1IW7 A;  4Y7N K;  1F7U A;  2D6F C;  1ZXO A;  1TWF A;  3CQZ C;  5DM6 S;  3LYW A;  3S16 K;  2ZFZ A;  1J6V A;  1DCO A;  3ERE D;  2R92 C;  2KXY A;  3GTO C;  1F7V A;  1DCP A;  4G7Z A;  3JST A;  5C4X K;  2JA6 K;  4U67 S;  4BY7 C;  2WAQ L;  3M4O C;  1O2A A;  1O29 A;  4O2D A;  3S1M C;  2A6H A;  4LQY A;  2YU9 C;  4GTB A;  2JA8 K;  4A3L K;  2B63 A;  4A3F K;  4BKW A;  1B4B A;  1JQW A;  1F93 A;  3A8K A;  3HOU C;  1XZQ B;  4KDD A;  3S1Q C;  5FLM K;  2E2J C;  3HOY C;  4IOC S;  5IOR A;  3GIR A;  1WOR A;  5M3M K;  2NVT K;  3PIP S;  3SZY A;  2L5N A;  2E2H C;  3GTK K;  2JA6 A;  5IOS A;  4XCH A;  2ZJR S;  2JH3 A;  1TWF C;  1WOP A;  1IS1 A;  1SFO A;  5IOQ A;  5JVH S;  1TWF K;  1YNN A;  2JA7 A;  1TWH K;  1B4A A;  4A3K K;  3K7A C;  1ISE A;  4A3I C;  4A3E K;  1O28 A;  2NVY C;  4J3N A;  5FJ8 K;  4KM9 A;  1L0W A;  4X6A C;  4BY1 C;  3HOV K;  2JA5 A;  1USM A;  4QJV B;  1YX2 A;  1IL2 A;  3T02 A;  2XCO A;  3CQZ K;  3TFH A;  1WCM A;  3RZD K;  1X31 C;  1TWA K;  3HKZ L;  4OIP A;  3GTM K;  1WSR A;  5IYC K;  2NVQ K;  2GSU A;  3S2H K;  4G0V A;  3GTJ K;  2A69 A;  2NVX C;  1EI6 A;  5M3F K;  1WQF A;  4GTD A;  2GSN A;  1VGX A;  4FZB A;  1HI9 A;  3GEH A;  4PAB A;  3N0C A;  2RGR A;  3GTK C;  2JA7 C;  3OPF A;  2O5J A;  1BGW A;  4FM9 A;  4Q5S A;  4KMU A;  4OIR A;  1I6H C;  3S15 C;  1I50 A;  4OIQ A;  3CQZ A;  1TWA A;  3I4N C;  3GTM A;  1INN A;  2FQT A;  3M3Y K;  1G51 A;  1WIH A;  1DD5 A;  5EGH A;  4BBR K;  2PHC B;  4GTA A;  1XXC A;  4QIW L;  4G7H A;  2XCR B;  1WQH A;  4LK0 A;  1PJ6 A;  5M5Y K;  3T01 A;  3HOY K;  1K83 C;  4C3H K;  4WJ3 M;  1R9T A;  3A8J A;  1BS2 A;  4MEX A;  4KAR A;  3LAP A;  2R92 K;  3H3V L;  1TWH C;  1IE0 A;  5M5W K;  3GTQ K;  2L3U A;  4NOI A;  4A3D C;  3CF5 S;  2BE5 A;  4WCE S;  2WB1 L;  3TTG A;  1XZQ A;  3FOF A;  3HOW C;  4YFN A;  4OIN A;  3TFJ A;  5C3E C;  5L46 A;  3AD8 C;  5TMF A;  1IQ0 A;  4XLP A;  3AQO A;  3HOU K;  1JVI A;  3S1M K;  3LAJ A;  1SFO C;  1HQM A;  2E2I A;  3HOV C;  2KPU A;  4GTF A;  5IYD K;  2E2H K;  2JA8 C;  3CAG A;  4P5B A;  1XXA A;  5C44 C;  2XCQ A;  4KC6 A;  3GTL A;  3GTP C;  2WB1 D;  2JA6 C;  5C4X C;  5IP9 K;  3S14 K;  3VA7 A;  2GAH C;  3H3V D;  5C44 K;  4GTC A;  2PMZ L;  1TWC K;  4G0U A;  3S15 K;  2NVX K;  1ZBS A;  2R7Z A;  1USO A;  1XXB A;  3K7A K;  4KB2 A;  4G0W A;  2CW0 A;  3GTQ A;  3ORE A;  1O24 A;  1WOO A;  4C3I K;  2E2I K;  4WFN S;  2B63 K;  4BY1 K;  1WQG A;  1TWG A;  3GEE A;  4Y52 C;  4ZH4 A;  4PAA A;  3PIO S;  3G4A A;  2GSO A;  2Y0S L;  1EK8 A;  1Y1V C;  1O2F B;  1TWA C;  3GTL C;  3GTM C;  3WOD A;  2VUM K;  5IP7 C;  1TWC A;  4A3M K;  3IPJ A;  3RZO K;  2O5I A;  4AYB L;  1ZQ1 C;  4KN4 A;  4A3D K;  3HOZ C;  1Y1W K;  3HOX K;  3QX3 A;  2VUM C;  2R93 A;  3FHZ A;  4C45 A;  4GTL A;  2PA8 L;  1PJ7 A;  3BP8 C;  1I3Q C;  4LR2 A;  3M4O K;  3N3Y A;  1TWG K;  1FEU A;  2W7V A;  4ILD A;  2V6U A;  3S0X A;  1VH2 A;  3HKZ D;  5DM7 S;  3AD7 C;  1I6H K;  4A3L C;  4GZY A;  1IBA A;  2A6E A;  1WCM C;  3S1N K;  3HOW K;  3M3Y C;  3GTG C;  2NVQ C;  4LOW A;  3PO2 C;  1WCM K;  4GT9 A;  4WFB S;  4C3I C;  2B63 C;  4MEY A;  4A3F C;  4YG2 A;  5IYB C;  3AQP A;  2PPB A;  4C2M K;  5IYD C;  2ZJQ S;  1VLO A;  4A3J C;  1JOE A;  4WIL A;  4KMA A;  2E2J K;  3SZZ A;  4A3C K;  1Y1V K;  5IYB K;  3FOE A;  5IP7 K;  2E2I C;  3GTO A;  1C0A A;  1O27 A;  3OEP A;  2R93 K;  4A3E C;  4A3I K;  4MQ9 A;  2Y0S D;  3I4N K;  4GFQ A;  1TWC C;  3LPX A;  5HL7 S;  3DLL S;  5JFE A;  3GTQ C;  4WJ4 A;  4A3B C;  2EBB A;  3H0G C;  1DCH A;  4A3M C;  4Y52 K;  4C3H C;  1K83 K;  4BY7 K;  4Q4Z A;  1VRQ C;  4IOA S;  4YFK A;  4A93 K;  2R92 A;  1TWG C;  5TJ3 A;  3MML B;  1SFO K;  1I6V A;  1EH1 A;  3AD9 C;  2ZJP S;  1BJT A;  1XZP B;  3RZD C;  1TWH A;  4M1X A;  4JK1 A;  4C3J C;  4G7O A;  2ZUE A;  1Y1W C;  3HOZ K;  4KAS A;  5FLM C;  1YCL A;  4KAW X;  4BLA A;  1V5V A;  4LJZ A;  1O26 A;  4C2M C;  3TFI A;  4KB4 A;  1I3Q A;  3EQL A;  1WOS A;  4BLB A;  3GTO K;  2JA5 K;  3S17 C;  1XZP A;  2V6S A;  4AH6 A;  1J6X A;  3BUE A;  5JVO A;  3S2D K;  1XPP A;  2JA7 K;  4LLG A;  4BXX K;  3I4M C;  3S1N C;  2E2H A;  5TMC A;  1ZVU A;  4A3J K;  3S1R C;  1UV7 A;  1YNJ A;  2A68 A;  3GTJ A;  3GTG A;  4OIO A;  4A3C C;  2ZUF A;  4GTE A;  1K83 A;  4A3B K;  3Q3Q A;  2R7Z C;  2P8T A;  3HOX C;  3ADA C;  3S1Q K;  3N0B A;  4BBS K;  1J98 A;  1I3Q K;  3GDZ A;  5CJ9 A;  2NVX A;  2R7Z K;  2YU9 A;  2CFA A;  4WF9 S;  3RZO C;  3GEI A;  2NVY K;  4LK1 A;  1BDF A;  2P5M A;  4X6A K;  3FKI K;  1O2B A;  1VJE A;  4KMD A;  4XSZ A;  4AYB D;  3GTP A;  2FQO A;  1SMY A;  4XLN A;  4C3J K;  1F9N A;  4P5A A;  2WAQ D;  3L4K A;  3GTG K;  2CFA B;  3GSI A;  4A3G K;  3PO2 K;  4KMH A;  3H0G A;  4A93 C;  2VUM A;  5C3E K;  1I50 K;  1GE9 A;  4Y7N C;  3S17 K;  3G4C A;  4A3G C;  3S2H C;  4KM8 A;  5M5X K;  2YU9 K;  3HXA A;  5E68 A;  4IO9 S;  3S2D C;  5IOT A;  4WFA S;  4KAT A;  1I50 C;  3I4M K;  4XSX A;  4P9S A;  3V4G A;  3T00 A;  1PJ5 A;  1ZYR A;  3BP3 A;  1KQ4 A;  3FKI A;  4BBR C;  4QIW D;  5IYC C;  2Y3P A; 
#chains in the Genus database with same CATH homology
 4BY1 C;  3GTP K;  3HOV K;  2PMZ L;  4A3M C;  4Y52 K;  3DXJ A;  5IP9 C;  3S14 C;  1TWC K;  4C3H C;  2PA8 D;  1K83 K;  4BY7 K;  2PMZ D;  1R9T K;  4QJV B;  2NVX K;  3S15 K;  4A3K C;  4Q4Z A;  5C4J C;  4YFX A;  3K7A K;  4BBS C;  3CQZ K;  3RZD K;  2CW0 A;  1TWA K;  1R9T C;  4YFK A;  3HKZ L;  4A93 K;  5D4D A;  1TWG C;  4OIP A;  3GTM K;  5IYC K;  1SFO K;  1I6V A;  4C3I K;  2E2I K;  2B63 K;  5C4J K;  4BY1 K;  2NVQ K;  2JA5 C;  4Y52 C;  3S2H K;  3GTJ K;  3RZD C;  2NVT C;  2A69 A;  4ZH4 A;  3GTL K;  2NVX C;  4JK1 A;  4C3J C;  4G7O A;  5M3F K;  1Y1W C;  3HOZ K;  3FKI C;  5FLM C;  3PO3 C;  2Y0S L;  4BXX C;  4LJZ A;  1Y1V C;  4C2M C;  4KN7 A;  1TWA C;  3GTL C;  3GTM C;  3H0G K;  3WOD A;  3GTK C;  3EQL A;  2JA7 C;  2VUM K;  5IP7 C;  2O5J A;  3S1R K;  4QJV A;  3GTO K;  2JA5 K;  3PO3 K;  3S17 C;  2R93 C;  3GTJ C;  4A3M K;  3RZO K;  3S16 C;  1IW7 A;  4KMU A;  4Q5S A;  2O5I A;  4AYB L;  4OIR A;  4KN4 A;  1I6H C;  4A3D K;  3HOZ C;  3S15 C;  1Y1W K;  3S2D K;  1XPP A;  3HOX K;  2VUM C;  2JA7 K;  4Y7N K;  4OIQ A;  4LLG A;  4BXX K;  3I4M C;  2PA8 L;  3CQZ C;  3I4N C;  1I3Q C;  3S1N C;  3S16 K;  3M3Y K;  3M4O K;  5TMC A;  1TWG K;  4A3J K;  2R92 C;  3S1R C;  3GTO C;  4BBR K;  1YNJ A;  2A68 A;  4OIO A;  4G7Z A;  4A3C C;  5C4X K;  2JA6 K;  3HKZ D;  4QIW L;  1I6H K;  2WAQ L;  4BY7 C;  4A3B K;  2R7Z C;  4G7H A;  3HOX C;  3M4O C;  4A3L C;  3S1M C;  4GZY A;  2A6H A;  3S1Q K;  4LK0 A;  5M5Y K;  4BBS K;  2A6E A;  1WCM C;  3HOY K;  1I3Q K;  3S1N K;  1K83 C;  2YU9 C;  4C3H K;  3HOW K;  3M3Y C;  2JA8 K;  4MEX A;  2R7Z K;  2R92 K;  4A3L K;  3H3V L;  1TWH C;  3GTG C;  4A3F K;  2NVQ C;  3PO2 C;  1WCM K;  3RZO C;  2NVY K;  5M5W K;  3GTQ K;  4NOI A;  4LK1 A;  4A3D C;  2BE5 A;  3HOU C;  1BDF A;  2WB1 L;  4C3I C;  2B63 C;  4X6A K;  3S1Q C;  3FKI K;  5FLM K;  2E2J C;  4MEY A;  4A3F C;  3HOY C;  4XSZ A;  4YG2 A;  4AYB D;  5IYB C;  3HOW C;  2PPB A;  4C2M K;  4YFN A;  4OIN A;  5IYD C;  5M3M K;  2NVT K;  4XLN A;  1SMY A;  4C3J K;  2E2H C;  5C3E C;  2WAQ D;  4A3J C;  3GTG K;  3GTK K;  4A3G K;  2E2J K;  3PO2 K;  4A3C K;  5TMF A;  1Y1V K;  1TWF C;  5IYB K;  4XLP A;  3HOU K;  4A93 C;  5C3E K;  3S1M K;  5IP7 K;  1SFO C;  2E2I C;  1I50 K;  4Y7N C;  3S17 K;  2R93 K;  1HQM A;  4A3E C;  4A3G C;  4MQ9 A;  4A3I K;  3S2H C;  3HOV C;  2Y0S D;  1TWF K;  5M5X K;  2YU9 K;  3I4N K;  5IYD K;  1TWC C;  1YNN A;  2E2H K;  2JA8 C;  3S2D C;  1TWH K;  4A3K K;  5C44 C;  1I50 C;  3I4M K;  4XSX A;  3K7A C;  3GTP C;  4A3I C;  4A3E K;  2WB1 D;  2JA6 C;  5C4X C;  5IP9 K;  3S14 K;  2NVY C;  3GTQ C;  3H3V D;  1ZYR A;  5FJ8 K;  4A3B C;  3H0G C;  4X6A C;  4BBR C;  4QIW D;  5IYC C;  5C44 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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