3GTOC

Backtracked rna polymerase ii complex with 15mer rna
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 41
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtoC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtoC01
4BY7C 3M4OC 3GTLK 2E2HC 4OINA 3I4NC 4A3CK 4X6AK 2VUMC 4C3IK 1SFOC 3M3YC 2Y0SL 4Y7NK 1R9TC 2E2IK 2A69A 2BE5A 5C4XC 1K83K 5M3FK 1I6HC 5IYCK 3EQLA 2JA6K 3RZOK 3S1NK 1IW7A 3S1QC 5IP9K 3S1RK 3DXJA 2A6HA 4LK1A 4BXXC 4C3HC 2PPBA 4XLNA 2JA8C 5M5YK 1Y1WK 2NVTK 3HOZK 3PO3K 2YU9C 3GTMK 4A93K 2NVYC 3GTKC 5C3EK 4ZH4A 4A3LC 2WB1L 3CQZK 4QJVB 4G7OA 4YFKA 4OIOA 1TWHK 2R7ZC 4C2MK 4A3DK 3S15C 1TWGC 2PA8L 1TWFC 4A3FC 4OIRA 2JA5C 5IYDC 5C44C 1XPPA 4QIWL 5M5XK 3S14K 3M4OK 4BY7K 3RZDK 2R93C 1SFOK 1TWCC 3GTGK 4MQ9A 1R9TK 2NVXC 4A3KK 3S17C 3S1MC 4G7ZA 5IYBC 2WB1D 1I3QC 3GTPK 2NVQC 3S16C 4MEYA 2PA8D 1I50C 4QIWD 3GTJC 5C4JC 3S1QK 3HOVC 1WCMC 4A3IC 1YNJA 5D4DA 2E2JC 5IP7C 3HOUC 2B63K 3S2HK 1SMYA 4C3JK 2YU9K 3I4MC 3HOWC 2NVYK 5FLMK 4BY1K 1TWAK 4QJVA 2WAQL 3HOXK 1I6VA 1Y1VC 4A3BK 4A3GK 3GTQC 4BBSC 2R92K 3S15K 3HOYC 5IYDK 4X6AC 5C44K 4A3CC 2JA7C 3H3VL 1HQMA 3S2DK 4Y7NC 2E2HK 3I4NK 4Q4ZA 2E2IC 2NVXK 4YFNA 2VUMK 1K83C 3M3YK 3S17K 3S1MK 4MEXA 5IYCC 2WAQD 5C4XK 1I3QK 3H0GC 2O5JA 2JA6C 5M3MK 1I6HK 4NOIA 3FKIC 4Y52C 3RZOC 3S16K 4XLPA 3PO2C 4A3MC 3HOVK 3H3VD 3S1RC 4YFXA 5IP7K 4OIQA 4A3EC 3HKZL 4Q5SA 3K7AC 1Y1WC 3HOUK 2NVTC 3HOZC 4BXXK 4C3HK 3PO3C 1ZYRA 3WODA 4G7HA 3GTMC 2JA8K 4GZYA 5C3EC 4XSXA 3CQZC 2CW0A 3GTKK 4YG2A 4A3LK 4KN7A 1TWHC 4C2MC 3GTQK 4JK1A 4A3JC 5IP9C 4XSZA 4OIPA 3GTOC 4BBSK 2R7ZK 3HKZD 3S14C 4BBRC 2O5IA 1TWFK 1TWGK 4A3FK 3RZDC 3GTLC 2JA5K 2JA7K 3GTGC 4C3IC 4A3KC 2R93K 1TWCK 4AYBL 2A6EA 4LK0A 2PMZL 3H0GK 5IYBK 3GTPC 3FKIK 4Y52K 5TMCA 3PO2K 2NVQK 3GTJK 4A3MK 1I50K 3GTOK 3S1NC 1YNNA 5C4JK 2Y0SD 1WCMK 4A3IK 4A3EK 2B63C 2E2JK 3K7AK 3S2HC 4KN4A 4AYBD 2PMZD 4C3JC 1BDFA 4LJZA 2A68A 5FLMC 5TMFA 1TWAC 4BY1C 4KMUA 4A93C 3HOWK 3I4MK 3HOXC 5M5WK 4A3BC 4A3GC 5FJ8K 4A3JK 2R92C 1Y1VK 4A3DC 4LLGA 4BBRK 3S2DC 3HOYK
chains in the Genus database with same CATH superfamily
4BY7C 1TWFA 4A3CK 4Y7NK 4WF9S 3LAPA 1R9TC 2BE5A 1K83K 5IYCK 2KWAA 3FOEA 3RZOK 3S1NK 1I50A 3GDZA 1WCMA 4C3HC 4WJ3M 2JA8C 3T01A 2GAHC 2ZFZA 2KQ1A 4KARA 4A3LC 1ZBSA 2WB1L 1XZQB 4G7OA 2CFAB 1TWFC 1XPPA 3GTQA 5IYDC 5C44C 2R7ZA 1XZPB 5EGHA 2JA5A 1DCPA 3S17C 3A8IA 2XCRB 4G7ZA 5IYBC 2WB1D 1DCOA 4KM9A 2NVQC 3H0GA 3GTJC 1I50C 4GTCA 3FKIA 3S1QK 3MMLB 3HOVC 1WCMC 4A3IC 1YNJA 4GTEA 1HI9A 4GFQA 1SMYA 2YU9K 3BP3A 5FLMK 1TWAK 5HL8A 2WAQL 1I6VA 1XXBA 3GTQC 4BBSC 3S15K 4X6AC 3GTOA 1HQMA 3SZYA 2NVXK 4YFNA 4KATA 1WSRA 2WAQD 3H0GC 2O5JA 5M3MK 1K83A 3FKIC 1JOEA 1UV7A 1BJTA 4A3MC 1IL2A 3S1RC 5IP7K 5IOQA 1VGXA 3K7AC 5HL7S 4LQYA 1F7VA 3HOZC 4PAAA 4C3HK 2JA8K 5C3EC 4A3LK 4BBRK 4G0VA 3GTOC 3T00A 2R92A 3S14C 4BBRC 2O5IA 1TWFK 3IPJA 3FOFA 3RZDC 2JA7K 3GTGC 2E2HA 4LK0A 5IYBK 3TFJA 3PO2K 2NVQK 4KMHA 3GTJK 1I50K 3S1NC 1WCMK 4A3IK 4A3EK 3GEIA 4O2DA 3TFHA 4KN4A 1WQFA 1BDFA 2GSUA 4GTDA 1WOOA 1F93A 4WFNS 3HOXC 2YU9A 5M5WK 4A3BC 1GE9A 4A3GC 4A3JK 2R92C 1B4BA 4LLGA 3PIPS 3LYWA 3S2DC 1TWGA 4X6AK 2E2HC 1ZXOA 5M3FK 2NVXA 1O29A 1EFWA 3EQLA 3N0BA 2L3UA 1O28A 3S1QC 3ERED 2L5NA 3S1RK 2A6HA 4GTLA 4LK1A 4BXXC 2PPBA 1WQGA 1X31C 4XLNA 2XCQA 4PABA 3HOZK 2YU9C 4A93K 5DM6S 5C3EK 4QJVB 3A8JA 1JVIA 2V6TA 4A3DK 3S15C 1TWGC 1PJ7A 3GTOK 4OIRA 3M4OK 3S14K 3RZDK 3A8KA 1SFOK 2JA7A 3GTGK 2NVXC 1XXAA 4XCHA 4BLBA 4GTAA 3T02A 4MEYA 1C0AA 1O2FB 2JA6A 5C4JC 1YX2A 3GTJA 2E2JC 1F9NA 5IP7C 1O27A 4WILA 3L4KA 3HOXK 4A3BK 4A3GK 5IOSA 3L4JA 2R92K 3HOYC 1EH1A 3AD9C 2JA7C 3H3VL 3S2DK 2E2HK 2E2IC 1ISEA 4KAWX 3S1MK 3LAJA 4MEXA 1I3QK 2JA6C 4NOIA 3DLLS 4XLPA 3PO2C 2FQOA 3OREA 3H3VD 1INNA 4A3EC 3ADAC 4Q5SA 3HKZL 2NVTC 4BXXK 1ZYRA 4GZYA 3OEPA 3AD7C 4YG2A 4KN7A 4C2MC 4JK1A 4A3JC 5IP9C 3BUEA 3S0XA 3AH5A 3HKZD 1TWGK 1IBAA 4FZBA 2VUMA 1SFOA 4AYBL 2A6EA 2PMZL 3GTGA 1XXCA 4BLAA 2GSNA 2JH3A 3SZZA 5TMCA 1FEUA 1VRQC 5C4JK 2Y0SD 1PJ6A 1V5VA 2B63C 2E2JK 3NUHA 1O25A 1EK8A 4AYBD 2PMZD 4LJZA 1EQRA 4BY1C 4A93C 4KMUA 5IORA 5JFEA 3OPFA 3GTKA 4A3DC 4WFBS 5E68A 3HOYK 3M4OC 3GTLK 3I4NC 4OINA 3TFIA 2W7VA 4RMFA 2VUMC 1SFOC 3M3YC 4IOAS 4GTBA 1O2AA 2A69A 1TWCA 2E2IK 5DM7S 3JSTA 3QX3A 4LR2A 2JA6K 1I3QA 3GSIA 3DXJA 2D6FC 5M5YK 2NVTK 2ZJQS 4M1XA 3GTKC 5HQHA 4OIOA 4C2MK 1Y1VA 2PA8L 5IP9K 4A3FC 3HXAA 4P9SA 1RU0A 2R93C 1TWCC 3N3YA 4MQ9A 2ZUEA 3S1MC 3GIRA 1I3QC 2P8TA 2PA8D 2PHCB 2V6SA 3CAGA 5D4DA 1USMA 2B63K 4U67S 4KM8A 5CHPA 3HOWC 3G4AA 2NVYK 4BY1K 4DDQA 4P5BA 1Y1VC 1TWHA 3AQPA 5JVGS 1WSVA 4BKWA 3I4NK 4Q4ZA 3GTLA 2VUMK 3M3YK 1IQ0A 3FHZA 2E2IA 1JQWA 3S16K 1USOA 3GTPA 3VA7A 4OIQA 3HOUK 1Y1WC 2KPUA 3PO3C 4G7HA 3GTMC 4P5AA 5JVHS 3CQZC 2CW0A 3GTKK 3V4GA 4J3NA 1TWHC 4WJ4A 2KXYA 4AH6A 4A3FK 3GTLC 4ILDA 1DCHA 1DD5A 2R93K 4A3KC 1TWCK 2EBBA 1J6WA 1WORA 3GTPC 4G0UA 4Y52K 4WFAS 1ZQ1C 1YNNA 4KMDA 3BP8C 4G0WA 1WIHA 5L46A 3S2HC 4C3JC 5TJ3A 2B63A 1O26A 5IOTA 3HOWK 2NVYA 1YCLA 5FJ8K 1Y1VK 1VH2A 1L0WA 4C3IK 2Y0SL 4WCES 5C4XC 1VJEA 3N0CA 1I6HC 5JVOA 1F7UA 3PIOS 1BS2A 3LPXA 3G4CA 1O24A 2Y3PA 1IW7A 1BGWA 3CF5S 1Y1WK 2ZJRS 2V6UA 3PO3K 3GTMK 2NVYC 4ZH4A 2RH6A 3CQZK 5EGEA 4YFKA 4IOCS 4KB2A 1TWHK 2R7ZC 4QIWL 1J6XA 4KC6A 1B4AA 2JA5C 5M5XK 4FM9A 4BY7K 1EI6A 4KASA 1R9TK 4A3KK 2RGRA 2R93A 1VLOA 1ZVUA 1PJ5A 3GTPK 3S16C 4QIWD 4LOWA 3HOUC 3S2HK 4C3JK 3I4MC 4QJVA 2GAGC 1IE0A 4KB4A 5C44K 3Q3QA 4A3CC 5IYDK 3GEHA 4Y7NC 1G51A 1K83C 3S17K 5C4XK 5IYCC 4KMAA 4GTFA 3AQOA 5CJ9A 1I6HK 4C45A 4Y52C 3RZOC 1KQ4A 1WQHA 3HOVK 4YFXA 3WODA 1Y1WA 4XSXA 3GTMA 1TWAA 4IO9S 1WOSA 2ZUFA 1XZQA 3GTQK 2CFAA 3CQZA 4OIPA 4XSZA 4BBSK 2R7ZK 2JA5K 1XZPA 4C3IC 4GT9A 2XCOA 1J6VA 1R9TA 3TTGA 3H0GK 1WOPA 3FKIK 2GSOA 2ZJPS 4A3MK 3GEEA 2P5MA 3K7AK 2FQTA 4KDDA 2A68A 5FLMC 5TMFA 1TWAC 3I4MK 3AD8C 1J98A 1IS1A 1AB4A 1O2BA
chains in the Genus database with same CATH topology
4BY7C 3M4OC 3GTLK 2E2HC 4OINA 3I4NC 4A3CK 4X6AK 2VUMC 4C3IK 1SFOC 3M3YC 2Y0SL 4Y7NK 1R9TC 2E2IK 2A69A 2BE5A 5C4XC 1K83K 5M3FK 1I6HC 5IYCK 3EQLA 2JA6K 3RZOK 3S1NK 1IW7A 3S1QC 5IP9K 3S1RK 3DXJA 2A6HA 4LK1A 4BXXC 4C3HC 2PPBA 4XLNA 2JA8C 5M5YK 1Y1WK 2NVTK 3HOZK 3PO3K 2YU9C 3GTMK 4A93K 2NVYC 3GTKC 5C3EK 4ZH4A 4A3LC 2WB1L 3CQZK 4QJVB 4G7OA 4YFKA 4OIOA 1TWHK 2R7ZC 4C2MK 4A3DK 3S15C 1TWGC 2PA8L 1TWFC 4A3FC 4OIRA 2JA5C 5IYDC 5C44C 1XPPA 4QIWL 5M5XK 3S14K 3M4OK 4BY7K 3RZDK 2R93C 1SFOK 1TWCC 3GTGK 4MQ9A 1R9TK 2NVXC 4A3KK 3S17C 3S1MC 4G7ZA 5IYBC 2WB1D 1I3QC 3GTPK 2NVQC 3S16C 4MEYA 2PA8D 1I50C 4QIWD 3GTJC 5C4JC 3S1QK 3HOVC 1WCMC 4A3IC 1YNJA 5D4DA 2E2JC 5IP7C 3HOUC 2B63K 3S2HK 1SMYA 4C3JK 2YU9K 3I4MC 3HOWC 2NVYK 5FLMK 4BY1K 1TWAK 4QJVA 2WAQL 3HOXK 1I6VA 1Y1VC 4A3BK 4A3GK 3GTQC 4BBSC 2R92K 3S15K 3HOYC 5IYDK 4X6AC 5C44K 4A3CC 2JA7C 3H3VL 1HQMA 3S2DK 4Y7NC 2E2HK 3I4NK 4Q4ZA 2E2IC 2NVXK 4YFNA 2VUMK 1K83C 3M3YK 3S17K 3S1MK 4MEXA 5IYCC 2WAQD 5C4XK 1I3QK 3H0GC 2O5JA 2JA6C 5M3MK 1I6HK 4NOIA 3FKIC 4Y52C 3RZOC 3S16K 4XLPA 3PO2C 4A3MC 3HOVK 3H3VD 3S1RC 4YFXA 5IP7K 4OIQA 4A3EC 3HKZL 4Q5SA 3K7AC 1Y1WC 3HOUK 2NVTC 3HOZC 4BXXK 4C3HK 3PO3C 1ZYRA 3WODA 4G7HA 3GTMC 2JA8K 4GZYA 5C3EC 4XSXA 3CQZC 2CW0A 3GTKK 4YG2A 4A3LK 4KN7A 1TWHC 4C2MC 3GTQK 4JK1A 4A3JC 5IP9C 4XSZA 4OIPA 3GTOC 4BBSK 2R7ZK 3HKZD 3S14C 4BBRC 2O5IA 1TWFK 1TWGK 4A3FK 3RZDC 3GTLC 2JA5K 2JA7K 3GTGC 4C3IC 4A3KC 2R93K 1TWCK 4AYBL 2A6EA 4LK0A 2PMZL 3H0GK 5IYBK 3GTPC 3FKIK 4Y52K 5TMCA 3PO2K 2NVQK 3GTJK 4A3MK 1I50K 3GTOK 3S1NC 1YNNA 5C4JK 2Y0SD 1WCMK 4A3IK 4A3EK 2B63C 2E2JK 3K7AK 3S2HC 4KN4A 4AYBD 2PMZD 4C3JC 1BDFA 4LJZA 2A68A 5FLMC 5TMFA 1TWAC 4BY1C 4KMUA 4A93C 3HOWK 3I4MK 3HOXC 5M5WK 4A3BC 4A3GC 5FJ8K 4A3JK 2R92C 1Y1VK 4A3DC 4LLGA 4BBRK 3S2DC 3HOYK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BY7 C;  3M4O C;  3GTL K;  2E2H C;  4OIN A;  3I4N C;  4A3C K;  4X6A K;  2VUM C;  4C3I K;  1SFO C;  3M3Y C;  2Y0S L;  4Y7N K;  1R9T C;  2E2I K;  2A69 A;  2BE5 A;  5C4X C;  1K83 K;  5M3F K;  1I6H C;  5IYC K;  3EQL A;  2JA6 K;  3RZO K;  3S1N K;  1IW7 A;  3S1Q C;  5IP9 K;  3S1R K;  3DXJ A;  2A6H A;  4LK1 A;  4BXX C;  4C3H C;  2PPB A;  4XLN A;  2JA8 C;  5M5Y K;  1Y1W K;  2NVT K;  3HOZ K;  3PO3 K;  2YU9 C;  3GTM K;  4A93 K;  2NVY C;  3GTK C;  5C3E K;  4ZH4 A;  4A3L C;  2WB1 L;  3CQZ K;  4QJV B;  4G7O A;  4YFK A;  4OIO A;  1TWH K;  2R7Z C;  4C2M K;  4A3D K;  3S15 C;  1TWG C;  2PA8 L;  1TWF C;  4A3F C;  4OIR A;  2JA5 C;  5IYD C;  5C44 C;  1XPP A;  4QIW L;  5M5X K;  3S14 K;  3M4O K;  4BY7 K;  3RZD K;  2R93 C;  1SFO K;  1TWC C;  3GTG K;  4MQ9 A;  1R9T K;  2NVX C;  4A3K K;  3S17 C;  3S1M C;  4G7Z A;  5IYB C;  2WB1 D;  1I3Q C;  3GTP K;  2NVQ C;  3S16 C;  4MEY A;  2PA8 D;  1I50 C;  4QIW D;  3GTJ C;  5C4J C;  3S1Q K;  3HOV C;  1WCM C;  4A3I C;  1YNJ A;  5D4D A;  2E2J C;  5IP7 C;  3HOU C;  2B63 K;  3S2H K;  1SMY A;  4C3J K;  2YU9 K;  3I4M C;  3HOW C;  2NVY K;  5FLM K;  4BY1 K;  1TWA K;  4QJV A;  2WAQ L;  3HOX K;  1I6V A;  1Y1V C;  4A3B K;  4A3G K;  3GTQ C;  4BBS C;  2R92 K;  3S15 K;  3HOY C;  5IYD K;  4X6A C;  5C44 K;  4A3C C;  2JA7 C;  3H3V L;  1HQM A;  3S2D K;  4Y7N C;  2E2H K;  3I4N K;  4Q4Z A;  2E2I C;  2NVX K;  4YFN A;  2VUM K;  1K83 C;  3M3Y K;  3S17 K;  3S1M K;  4MEX A;  5IYC C;  2WAQ D;  5C4X K;  1I3Q K;  3H0G C;  2O5J A;  2JA6 C;  5M3M K;  1I6H K;  4NOI A;  3FKI C;  4Y52 C;  3RZO C;  3S16 K;  4XLP A;  3PO2 C;  4A3M C;  3HOV K;  3H3V D;  3S1R C;  4YFX A;  5IP7 K;  4OIQ A;  4A3E C;  3HKZ L;  4Q5S A;  3K7A C;  1Y1W C;  3HOU K;  2NVT C;  3HOZ C;  4BXX K;  4C3H K;  3PO3 C;  1ZYR A;  3WOD A;  4G7H A;  3GTM C;  2JA8 K;  4GZY A;  5C3E C;  4XSX A;  3CQZ C;  2CW0 A;  3GTK K;  4YG2 A;  4A3L K;  4KN7 A;  1TWH C;  4C2M C;  3GTQ K;  4JK1 A;  4A3J C;  5IP9 C;  4XSZ A;  4OIP A;  3GTO C;  4BBS K;  2R7Z K;  3HKZ D;  3S14 C;  4BBR C;  2O5I A;  1TWF K;  1TWG K;  4A3F K;  3RZD C;  3GTL C;  2JA5 K;  2JA7 K;  3GTG C;  4C3I C;  4A3K C;  2R93 K;  1TWC K;  4AYB L;  2A6E A;  4LK0 A;  2PMZ L;  3H0G K;  5IYB K;  3GTP C;  3FKI K;  4Y52 K;  5TMC A;  3PO2 K;  2NVQ K;  3GTJ K;  4A3M K;  1I50 K;  3GTO K;  3S1N C;  1YNN A;  5C4J K;  2Y0S D;  1WCM K;  4A3I K;  4A3E K;  2B63 C;  2E2J K;  3K7A K;  3S2H C;  4KN4 A;  4AYB D;  2PMZ D;  4C3J C;  1BDF A;  4LJZ A;  2A68 A;  5FLM C;  5TMF A;  1TWA C;  4BY1 C;  4KMU A;  4A93 C;  3HOW K;  3I4M K;  3HOX C;  5M5W K;  4A3B C;  4A3G C;  5FJ8 K;  4A3J K;  2R92 C;  1Y1V K;  4A3D C;  4LLG A;  4BBR K;  3S2D C;  3HOY K; 
#chains in the Genus database with same CATH topology
 4BY7 C;  1TWF A;  4A3C K;  4Y7N K;  4WF9 S;  3LAP A;  1R9T C;  2BE5 A;  1K83 K;  5IYC K;  2KWA A;  3FOE A;  3RZO K;  3S1N K;  1I50 A;  3GDZ A;  1WCM A;  4C3H C;  4WJ3 M;  2JA8 C;  3T01 A;  2GAH C;  2ZFZ A;  2KQ1 A;  4KAR A;  4A3L C;  1ZBS A;  2WB1 L;  1XZQ B;  4G7O A;  2CFA B;  1TWF C;  1XPP A;  3GTQ A;  5IYD C;  5C44 C;  2R7Z A;  1XZP B;  5EGH A;  2JA5 A;  1DCP A;  3S17 C;  3A8I A;  2XCR B;  4G7Z A;  5IYB C;  2WB1 D;  1DCO A;  4KM9 A;  2NVQ C;  3H0G A;  3GTJ C;  1I50 C;  4GTC A;  3FKI A;  3S1Q K;  3MML B;  3HOV C;  1WCM C;  4A3I C;  1YNJ A;  4GTE A;  1HI9 A;  4GFQ A;  1SMY A;  2YU9 K;  3BP3 A;  5FLM K;  1TWA K;  5HL8 A;  2WAQ L;  1I6V A;  1XXB A;  3GTQ C;  4BBS C;  3S15 K;  4X6A C;  3GTO A;  1HQM A;  3SZY A;  2NVX K;  4YFN A;  4KAT A;  1WSR A;  2WAQ D;  3H0G C;  2O5J A;  5M3M K;  1K83 A;  3FKI C;  1JOE A;  1UV7 A;  1BJT A;  4A3M C;  1IL2 A;  3S1R C;  5IP7 K;  5IOQ A;  1VGX A;  3K7A C;  5HL7 S;  4LQY A;  1F7V A;  3HOZ C;  4PAA A;  4C3H K;  2JA8 K;  5C3E C;  4A3L K;  4BBR K;  4G0V A;  3GTO C;  3T00 A;  2R92 A;  3S14 C;  4BBR C;  2O5I A;  1TWF K;  3IPJ A;  3FOF A;  3RZD C;  2JA7 K;  3GTG C;  2E2H A;  4LK0 A;  5IYB K;  3TFJ A;  3PO2 K;  2NVQ K;  4KMH A;  3GTJ K;  1I50 K;  3S1N C;  1WCM K;  4A3I K;  4A3E K;  3GEI A;  4O2D A;  3TFH A;  4KN4 A;  1WQF A;  1BDF A;  2GSU A;  4GTD A;  1WOO A;  1F93 A;  4WFN S;  3HOX C;  2YU9 A;  5M5W K;  4A3B C;  1GE9 A;  4A3G C;  4A3J K;  2R92 C;  1B4B A;  4LLG A;  3PIP S;  3LYW A;  3S2D C;  1TWG A;  4X6A K;  2E2H C;  1ZXO A;  5M3F K;  2NVX A;  1O29 A;  1EFW A;  3EQL A;  3N0B A;  2L3U A;  1O28 A;  3S1Q C;  3ERE D;  2L5N A;  3S1R K;  2A6H A;  4GTL A;  4LK1 A;  4BXX C;  2PPB A;  1WQG A;  1X31 C;  4XLN A;  2XCQ A;  4PAB A;  3HOZ K;  2YU9 C;  4A93 K;  5DM6 S;  5C3E K;  4QJV B;  3A8J A;  1JVI A;  2V6T A;  4A3D K;  3S15 C;  1TWG C;  1PJ7 A;  3GTO K;  4OIR A;  3M4O K;  3S14 K;  3RZD K;  3A8K A;  1SFO K;  2JA7 A;  3GTG K;  2NVX C;  1XXA A;  4XCH A;  4BLB A;  4GTA A;  3T02 A;  4MEY A;  1C0A A;  1O2F B;  2JA6 A;  5C4J C;  1YX2 A;  3GTJ A;  2E2J C;  1F9N A;  5IP7 C;  1O27 A;  4WIL A;  3L4K A;  3HOX K;  4A3B K;  4A3G K;  5IOS A;  3L4J A;  2R92 K;  3HOY C;  1EH1 A;  3AD9 C;  2JA7 C;  3H3V L;  3S2D K;  2E2H K;  2E2I C;  1ISE A;  4KAW X;  3S1M K;  3LAJ A;  4MEX A;  1I3Q K;  2JA6 C;  4NOI A;  3DLL S;  4XLP A;  3PO2 C;  2FQO A;  3ORE A;  3H3V D;  1INN A;  4A3E C;  3ADA C;  4Q5S A;  3HKZ L;  2NVT C;  4BXX K;  1ZYR A;  4GZY A;  3OEP A;  3AD7 C;  4YG2 A;  4KN7 A;  4C2M C;  4JK1 A;  4A3J C;  5IP9 C;  3BUE A;  3S0X A;  3AH5 A;  3HKZ D;  1TWG K;  1IBA A;  4FZB A;  2VUM A;  1SFO A;  4AYB L;  2A6E A;  2PMZ L;  3GTG A;  1XXC A;  4BLA A;  2GSN A;  2JH3 A;  3SZZ A;  5TMC A;  1FEU A;  1VRQ C;  5C4J K;  2Y0S D;  1PJ6 A;  1V5V A;  2B63 C;  2E2J K;  3NUH A;  1O25 A;  1EK8 A;  4AYB D;  2PMZ D;  4LJZ A;  1EQR A;  4BY1 C;  4A93 C;  4KMU A;  5IOR A;  5JFE A;  3OPF A;  3GTK A;  4A3D C;  4WFB S;  5E68 A;  3HOY K;  3M4O C;  3GTL K;  3I4N C;  4OIN A;  3TFI A;  2W7V A;  4RMF A;  2VUM C;  1SFO C;  3M3Y C;  4IOA S;  4GTB A;  1O2A A;  2A69 A;  1TWC A;  2E2I K;  5DM7 S;  3JST A;  3QX3 A;  4LR2 A;  2JA6 K;  1I3Q A;  3GSI A;  3DXJ A;  2D6F C;  5M5Y K;  2NVT K;  2ZJQ S;  4M1X A;  3GTK C;  5HQH A;  4OIO A;  4C2M K;  1Y1V A;  2PA8 L;  5IP9 K;  4A3F C;  3HXA A;  4P9S A;  1RU0 A;  2R93 C;  1TWC C;  3N3Y A;  4MQ9 A;  2ZUE A;  3S1M C;  3GIR A;  1I3Q C;  2P8T A;  2PA8 D;  2PHC B;  2V6S A;  3CAG A;  5D4D A;  1USM A;  2B63 K;  4U67 S;  4KM8 A;  5CHP A;  3HOW C;  3G4A A;  2NVY K;  4BY1 K;  4DDQ A;  4P5B A;  1Y1V C;  1TWH A;  3AQP A;  5JVG S;  1WSV A;  4BKW A;  3I4N K;  4Q4Z A;  3GTL A;  2VUM K;  3M3Y K;  1IQ0 A;  3FHZ A;  2E2I A;  1JQW A;  3S16 K;  1USO A;  3GTP A;  3VA7 A;  4OIQ A;  3HOU K;  1Y1W C;  2KPU A;  3PO3 C;  4G7H A;  3GTM C;  4P5A A;  5JVH S;  3CQZ C;  2CW0 A;  3GTK K;  3V4G A;  4J3N A;  1TWH C;  4WJ4 A;  2KXY A;  4AH6 A;  4A3F K;  3GTL C;  4ILD A;  1DCH A;  1DD5 A;  2R93 K;  4A3K C;  1TWC K;  2EBB A;  1J6W A;  1WOR A;  3GTP C;  4G0U A;  4Y52 K;  4WFA S;  1ZQ1 C;  1YNN A;  4KMD A;  3BP8 C;  4G0W A;  1WIH A;  5L46 A;  3S2H C;  4C3J C;  5TJ3 A;  2B63 A;  1O26 A;  5IOT A;  3HOW K;  2NVY A;  1YCL A;  5FJ8 K;  1Y1V K;  1VH2 A;  1L0W A;  4C3I K;  2Y0S L;  4WCE S;  5C4X C;  1VJE A;  3N0C A;  1I6H C;  5JVO A;  1F7U A;  3PIO S;  1BS2 A;  3LPX A;  3G4C A;  1O24 A;  2Y3P A;  1IW7 A;  1BGW A;  3CF5 S;  1Y1W K;  2ZJR S;  2V6U A;  3PO3 K;  3GTM K;  2NVY C;  4ZH4 A;  2RH6 A;  3CQZ K;  5EGE A;  4YFK A;  4IOC S;  4KB2 A;  1TWH K;  2R7Z C;  4QIW L;  1J6X A;  4KC6 A;  1B4A A;  2JA5 C;  5M5X K;  4FM9 A;  4BY7 K;  1EI6 A;  4KAS A;  1R9T K;  4A3K K;  2RGR A;  2R93 A;  1VLO A;  1ZVU A;  1PJ5 A;  3GTP K;  3S16 C;  4QIW D;  4LOW A;  3HOU C;  3S2H K;  4C3J K;  3I4M C;  4QJV A;  2GAG C;  1IE0 A;  4KB4 A;  5C44 K;  3Q3Q A;  4A3C C;  5IYD K;  3GEH A;  4Y7N C;  1G51 A;  1K83 C;  3S17 K;  5C4X K;  5IYC C;  4KMA A;  4GTF A;  3AQO A;  5CJ9 A;  1I6H K;  4C45 A;  4Y52 C;  3RZO C;  1KQ4 A;  1WQH A;  3HOV K;  4YFX A;  3WOD A;  1Y1W A;  4XSX A;  3GTM A;  1TWA A;  4IO9 S;  1WOS A;  2ZUF A;  1XZQ A;  3GTQ K;  2CFA A;  3CQZ A;  4OIP A;  4XSZ A;  4BBS K;  2R7Z K;  2JA5 K;  1XZP A;  4C3I C;  4GT9 A;  2XCO A;  1J6V A;  1R9T A;  3TTG A;  3H0G K;  1WOP A;  3FKI K;  2GSO A;  2ZJP S;  4A3M K;  3GEE A;  2P5M A;  3K7A K;  2FQT A;  4KDD A;  2A68 A;  5FLM C;  5TMF A;  1TWA C;  3I4M K;  3AD8 C;  1J98 A;  1IS1 A;  1AB4 A;  1O2B A; 
#chains in the Genus database with same CATH homology
 4BY7 C;  3M4O C;  3GTL K;  2E2H C;  4OIN A;  3I4N C;  4A3C K;  4X6A K;  2VUM C;  4C3I K;  1SFO C;  3M3Y C;  2Y0S L;  4Y7N K;  1R9T C;  2E2I K;  2A69 A;  2BE5 A;  5C4X C;  1K83 K;  5M3F K;  1I6H C;  5IYC K;  3EQL A;  2JA6 K;  3RZO K;  3S1N K;  1IW7 A;  3S1Q C;  5IP9 K;  3S1R K;  3DXJ A;  2A6H A;  4LK1 A;  4BXX C;  4C3H C;  2PPB A;  4XLN A;  2JA8 C;  5M5Y K;  1Y1W K;  2NVT K;  3HOZ K;  3PO3 K;  2YU9 C;  3GTM K;  4A93 K;  2NVY C;  3GTK C;  5C3E K;  4ZH4 A;  4A3L C;  2WB1 L;  3CQZ K;  4QJV B;  4G7O A;  4YFK A;  4OIO A;  1TWH K;  2R7Z C;  4C2M K;  4A3D K;  3S15 C;  1TWG C;  2PA8 L;  1TWF C;  4A3F C;  4OIR A;  2JA5 C;  5IYD C;  5C44 C;  1XPP A;  4QIW L;  5M5X K;  3S14 K;  3M4O K;  4BY7 K;  3RZD K;  2R93 C;  1SFO K;  1TWC C;  3GTG K;  4MQ9 A;  1R9T K;  2NVX C;  4A3K K;  3S17 C;  3S1M C;  4G7Z A;  5IYB C;  2WB1 D;  1I3Q C;  3GTP K;  2NVQ C;  3S16 C;  4MEY A;  2PA8 D;  1I50 C;  4QIW D;  3GTJ C;  5C4J C;  3S1Q K;  3HOV C;  1WCM C;  4A3I C;  1YNJ A;  5D4D A;  2E2J C;  5IP7 C;  3HOU C;  2B63 K;  3S2H K;  1SMY A;  4C3J K;  2YU9 K;  3I4M C;  3HOW C;  2NVY K;  5FLM K;  4BY1 K;  1TWA K;  4QJV A;  2WAQ L;  3HOX K;  1I6V A;  1Y1V C;  4A3B K;  4A3G K;  3GTQ C;  4BBS C;  2R92 K;  3S15 K;  3HOY C;  5IYD K;  4X6A C;  5C44 K;  4A3C C;  2JA7 C;  3H3V L;  1HQM A;  3S2D K;  4Y7N C;  2E2H K;  3I4N K;  4Q4Z A;  2E2I C;  2NVX K;  4YFN A;  2VUM K;  1K83 C;  3M3Y K;  3S17 K;  3S1M K;  4MEX A;  5IYC C;  2WAQ D;  5C4X K;  1I3Q K;  3H0G C;  2O5J A;  2JA6 C;  5M3M K;  1I6H K;  4NOI A;  3FKI C;  4Y52 C;  3RZO C;  3S16 K;  4XLP A;  3PO2 C;  4A3M C;  3HOV K;  3H3V D;  3S1R C;  4YFX A;  5IP7 K;  4OIQ A;  4A3E C;  3HKZ L;  4Q5S A;  3K7A C;  1Y1W C;  3HOU K;  2NVT C;  3HOZ C;  4BXX K;  4C3H K;  3PO3 C;  1ZYR A;  3WOD A;  4G7H A;  3GTM C;  2JA8 K;  4GZY A;  5C3E C;  4XSX A;  3CQZ C;  2CW0 A;  3GTK K;  4YG2 A;  4A3L K;  4KN7 A;  1TWH C;  4C2M C;  3GTQ K;  4JK1 A;  4A3J C;  5IP9 C;  4XSZ A;  4OIP A;  3GTO C;  4BBS K;  2R7Z K;  3HKZ D;  3S14 C;  4BBR C;  2O5I A;  1TWF K;  1TWG K;  4A3F K;  3RZD C;  3GTL C;  2JA5 K;  2JA7 K;  3GTG C;  4C3I C;  4A3K C;  2R93 K;  1TWC K;  4AYB L;  2A6E A;  4LK0 A;  2PMZ L;  3H0G K;  5IYB K;  3GTP C;  3FKI K;  4Y52 K;  5TMC A;  3PO2 K;  2NVQ K;  3GTJ K;  4A3M K;  1I50 K;  3GTO K;  3S1N C;  1YNN A;  5C4J K;  2Y0S D;  1WCM K;  4A3I K;  4A3E K;  2B63 C;  2E2J K;  3K7A K;  3S2H C;  4KN4 A;  4AYB D;  2PMZ D;  4C3J C;  1BDF A;  4LJZ A;  2A68 A;  5FLM C;  5TMF A;  1TWA C;  4BY1 C;  4KMU A;  4A93 C;  3HOW K;  3I4M K;  3HOX C;  5M5W K;  4A3B C;  4A3G C;  5FJ8 K;  4A3J K;  2R92 C;  1Y1V K;  4A3D C;  4LLG A;  4BBR K;  3S2D C;  3HOY K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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