2NVQC

Rna polymerase ii elongation complex in 150 mm mg+2 with 2'dutp
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
total genus 53
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2006-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2nvqC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2nvqC01
3RZDC 3HOXC 3S1RC 5IYCC 3HOYC 3HOUC 3S15C 4X6AK 5IP7C 1Y1VC 4YG2A 4OIOA 3I4MK 3PO2K 3GTPK 4YFXA 1I6HK 1I3QC 3S16K 5M3MK 3M3YK 5C44K 3S17C 3S2DC 2JA7K 3GTKC 3WODA 3S2HK 2Y0SD 4A3DC 2R7ZK 3S14K 4OIPA 4A3KK 3S1NK 2JA8K 4KMUA 3I4NK 5D4DA 3S1QK 4BBRK 3M4OK 4YFKA 4BY7C 4YFNA 1K83C 4XLNA 3HOWC 4GZYA 5FLMC 4A3LC 3GTQK 5IYDC 4C3IC 5IYBC 4A3EC 2A68A 2E2JK 3HKZL 1R9TC 2R93K 4A3MK 4LJZA 2YU9C 4LK1A 5C4JC 1XPPA 2NVQK 4NOIA 3GTJC 2JA6K 1TWHK 2NVYK 4BXXK 4Y52K 4KN7A 1BDFA 3K7AC 3HKZD 4BBSC 3K7AK 4BBSK 2E2HC 4Y52C 2VUMC 4BXXC 2BE5A 2NVXC 3RZOC 3CQZK 4KN4A 2NVQC 4Y7NK 2E2IK 3PO3K 3GTOC 1SMYA 4C3IK 3GTLC 1K83K 1SFOK 4A3FK 1TWHC 1I6VA 4JK1A 4C3JC 4C3JK 4A3KC 2YU9K 2A6EA 2B63K 4A3MC 3S1MC 3S1MK 2E2IC 4Y7NC 3PO3C 5FLMK 4A3LK 2B63C 4BY7K 4BBRC 1I6HC 3I4NC 3PO2C 3CQZC 4MEXA 2JA8C 1Y1VK 2NVXK 4A3FC 3HOYK 1SFOC 3RZOK 4G7OA 4XSZA 2R7ZC 3S14C 3S15K 3GTLK 2PMZL 3GTOK 3S2DK 3H3VD 2R92K 4XSXA 2JA6C 3GTJK 1I3QK 3GTPC 4A93C 4XLPA 2R93C 1R9TK 2WAQL 2VUMK 1WCMK 2E2HK 3GTQC 4BY1C 1TWGK 2O5IA 4A3JC 4G7HA 3M4OC 1TWAC 2NVYC 4A3IK 4G7ZA 4OINA 2JA5C 4AYBD 3S1NC 4OIQA 1IW7A 4OIRA 5C4JK 4A3DK 4Q4ZA 2PMZD 2E2JC 5IYBK 4A3BC 5M3FK 4A3EK 5IYDK 1YNJA 3S17K 5C44C 3HOWK 3HOZC 3S16C 4C2MK 3S1QC 2CW0A 3I4MC 4Q5SA 2PPBA 1I50K 4X6AC 5IP7K 2A69A 2PA8L 4MQ9A 3DXJA 5IYCK 3GTMK 3HOXK 3FKIK 3S2HC 3FKIC 2WB1D 3GTKK 5TMFA 2JA7C 4C3HK 5M5YK 3HOVK 4MEYA 4A3GC 5C4XC 3M3YC 3H0GK 4AYBL 2WAQD 3HOZK 1TWFK 5C4XK 5FJ8K 3HOUK 4A3BK 5M5WK 4C3HC 3S1RK 1HQMA 3RZDK 3H3VL 1Y1WC 1YNNA 3HOVC 3GTMC 2NVTK 5C3EK 3EQLA 1TWCK 1I50C 2O5JA 2Y0SL 1TWCC 2PA8D 5TMCA 4A3IC 4C2MC 2NVTC 4LK0A 4QJVA 3GTGC 1TWAK 5IP9K 1TWGC 4BY1K 1WCMC 4A3CK 4A3CC 2WB1L 4QIWD 1TWFC 5IP9C 4A93K 5M5XK 3GTGK 4QJVB 3H0GC 2JA5K 2A6HA 2R92C 1ZYRA 4LLGA 4A3GK 5C3EC 4A3JK 4ZH4A 4QIWL 1Y1WK
chains in the Genus database with same CATH superfamily
1EK8A 3RZDC 2FQTA 3DLLS 1JVIA 1XZQA 4OIOA 1I6HK 1VRQC 5M3MK 3S2DC 3S2HK 4KMHA 1XZPB 1WOSA 3OEPA 4KM9A 3S1QK 4GTLA 4BY7C 3M4OK 3HOWC 4GTAA 4A3LC 1ZVUA 3FHZA 4C3IC 2R93K 1ZQ1C 1XPPA 2NVQK 2JA6K 4BXXK 4Y52K 1WQFA 5CJ9A 3K7AC 1PJ7A 1I3QA 3GIRA 2XCQA 4KN4A 4M1XA 3LYWA 3TFIA 3PO3K 3GTOC 1O2FB 1K83K 1SFOK 4C3JK 4C3JC 2NVXA 3CAGA 3GTLA 4IOCS 3PO3C 4A3LK 4BY7K 1BGWA 1AB4A 2RGRA 1Y1VK 4KB4A 3HOYK 2D6FC 4G7OA 4XSZA 3GSIA 2P8TA 2PMZL 4BLAA 3S2DK 2R92K 4XSXA 2JA6C 1EQRA 3ERED 4RMFA 1JOEA 4XLPA 2R93C 1USMA 4KATA 2VUMK 2ZJQS 4G7HA 3M4OC 1EI6A 2NVYC 4OIQA 5C4JK 2E2JC 5M3FK 5IYDK 4GTFA 3HOZC 4O2DA 4Q5SA 1I50K 4MQ9A 3TTGA 3FKIK 3FKIC 3GTKK 5M5YK 3A8KA 1O24A 1FEUA 3A8JA 1L0WA 3HOZK 5C4XK 4WJ3M 2KXYA 1HQMA 3H3VL 1Y1WC 1YNNA 1R9TA 5C3EK 2E2HA 1TWCK 2O5JA 3QX3A 3GTGC 4LK0A 4DDQA 2JH3A 4A3CC 2WB1L 3ADAC 2JA6A 4QIWD 1EH1A 5IP9C 3GTPA 2R92C 3BUEA 2L3UA 1PJ5A 3SZYA 2JA7A 4ZH4A 3HOVK 2KWAA 3HOYC 4X6AK 1Y1VC 1I3QC 2W7VA 1WSRA 3M3YK 5C44K 3S0XA 3H0GA 1WQGA 4P5AA 1WIHA 2Y0SD 3T01A 3AD9C 1O2AA 4OIPA 4KAWX 3I4NK 4YFKA 3AD8C 1K83C 3GEIA 4GZYA 5HL8A 1IBAA 2A68A 2ZUEA 3CQZA 4WILA 4LOWA 3GTJC 1TWHK 2Y3PA 3N3YA 1BDFA 3K7AK 3LAJA 2R92A 3NUHA 2GSOA 4Y52C 4BXXC 5EGHA 1INNA 2NVQC 2YU9A 4KARA 2ZJPS 4C3IK 1DCHA 3FOEA 2A6EA 4A3MC 3S1MK 2E2IC 4Y7NC 3LAPA 2B63C 4BBRC 1I6HC 1XZQB 2JA8C 2NVXK 3RZOK 4A3FC 1IQ0A 3GTKA 3S14C 3GTLK 2RH6A 4ILDA 1R9TK 1HI9A 2WAQL 2E2HK 3GTQC 4BY1C 1TWGK 4OINA 1PJ6A 1C0AA 1IW7A 4OIRA 4A3DK 3JSTA 4Q4ZA 2VUMA 4A3EK 5IYBK 1YNJA 3S17K 3T00A 4KDDA 3S16C 1TWFA 5IP7K 3AQOA 3GEHA 3HOXK 1ZBSA 1G51A 4WFBS 2JA7C 3Q3QA 1GE9A 4WCES 1DD5A 3H0GK 5FJ8K 1I50A 3HOUK 5M5WK 4C3HC 1WSVA 4GT9A 3S1RK 1IE0A 3GTMC 2NVTK 2PA8D 4A3IC 4C2MC 5JFEA 4QJVA 1YX2A 1Y1WA 2V6UA 1WCMC 1XZPA 3G4CA 1TWFC 5M5XK 1RU0A 2JA5K 1ZYRA 4LLGA 4A3GK 3CF5S 3LPXA 4A3JK 4P5BA 3S1RC 5IYCC 3HOUC 4U67S 3I4MK 4KM8A 3GTPK 4YFXA 5TJ3A 4KMAA 2JA7K 3WODA 3T02A 2FQOA 2R7ZK 3AH5A 3BP3A 3GDZA 4A3KK 3S1NK 4KMUA 1KQ4A 5D4DA 1BS2A 4XLNA 5FLMC 1TWAA 5IYBC 4A3EC 4BKWA 2YU9C 4LK1A 1UV7A 3AD7C 3G4AA 3HKZD 4BBSC 1VH2A 3V4GA 2E2HC 1B4BA 1WORA 3CQZK 4PABA 1TWHA 3GEEA 3A8IA 2L5NA 3GTLC 5IOSA 5HQHA 4A3FK 2GSNA 2YU9K 2B63K 3S1MC 4IO9S 3GTOA 5FLMK 3PO2C 3CQZC 4MEXA 3S15K 2R7ZC 2NVYA 3OREA 5JVGS 3GTPC 1O27A 4A93C 3VA7A 2GAHC 2O5IA 2E2IA 4A3JC 4G0VA 4C45A 1TWAC 4G7ZA 5IORA 4KB2A 2JA5C 3S1NC 3L4KA 1USOA 4WFNS 4J3NA 1EFWA 4A3BC 2ZJRS 2JA5A 1TWGA 4C2MK 2CW0A 3IPJA 3I4MC 4WF9S 2PPBA 5IYCK 3MMLB 4AH6A 1XXBA 5IOQA 3GTMK 1X31C 5DM6S 4C3HK 4FM9A 4A3GC 3M3YC 4AYBL 2WAQD 2XCOA 1TWFK 3GTJA 2R7ZA 4A3BK 2KQ1A 1J6VA 3HOVC 1DCPA 1WCMA 5CHPA 3SZZA 5EGEA 1V5VA 4KMDA 1XXAA 1TWAK 2NVTC 4IOAS 5HL7S 1VLOA 5IP9K 3PIOS 4A3CK 3AQPA 4LQYA 1O25A 4A93K 5L46A 1O26A 4QJVB 3GTGK 3H0GC 1JQWA 5C3EC 4KC6A 4WFAS 1Y1WK 3HOXC 3S15C 2ZUFA 5IP7C 3PO2K 4YG2A 3HXAA 4KASA 3S16K 3S17C 5E68A 3GTKC 1ZXOA 2PHCB 4PAAA 4A3DC 3S14K 4P9SA 1VJEA 2JA8K 1J6XA 4BBRK 1F7UA 4YFNA 4GTEA 3GTQK 5IYDC 2E2JK 3HKZL 1R9TC 4A3MK 2V6SA 4LJZA 1YCLA 5C4JC 4NOIA 2EBBA 2NVYK 4KN7A 1J98A 3TFJA 4BBSK 1K83A 1SFOA 2VUMC 2BE5A 2NVXC 3RZOC 4BLBA 3N0BA 4LR2A 3FOFA 1O28A 4Y7NK 2E2IK 1SMYA 4WJ4A 3BP8C 3PIPS 2GSUA 1TWHC 1I6VA 4JK1A 4A3KC 2P5MA 1WOPA 4GTDA 1DCOA 2CFAA 2KPUA 3GTMA 2R93A 3I4NC 1SFOC 2V6TA 2B63A 3GTOK 2XCRB 3H3VD 3GTJK 2ZFZA 1B4AA 1I3QK 2GAGC 1XXCA 1WCMK 2CFAB 1VGXA 4A3IK 4GTBA 4AYBD 3OPFA 3FKIA 3L4JA 2PMZD 3GTGA 5DM7S 5C44C 3N0CA 4G0WA 4G0UA 3HOWK 3S1QC 1J6WA 5JVOA 4X6AC 2A69A 2PA8L 3DXJA 1Y1VA 3S2HC 2WB1D 1ISEA 5TMFA 4GFQA 1TWCA 4MEYA 5C4XC 4FZBA 1O29A 5IOTA 1WOOA 1WQHA 1O2BA 4GTCA 1IL2A 3RZDK 1F9NA 5JVHS 3EQLA 1I50C 3GTQA 2Y0SL 1TWCC 5TMCA 4XCHA 3TFHA 1F93A 1TWGC 4BY1K 1BJTA 1F7VA 2A6HA 1IS1A 4QIWL
chains in the Genus database with same CATH topology
3RZDC 3HOXC 3S1RC 5IYCC 3HOYC 3HOUC 3S15C 4X6AK 5IP7C 1Y1VC 4YG2A 4OIOA 3I4MK 3PO2K 3GTPK 4YFXA 1I6HK 1I3QC 3S16K 5M3MK 3M3YK 5C44K 3S17C 3S2DC 2JA7K 3GTKC 3WODA 3S2HK 2Y0SD 4A3DC 2R7ZK 3S14K 4OIPA 4A3KK 3S1NK 2JA8K 4KMUA 3I4NK 5D4DA 3S1QK 4BBRK 3M4OK 4YFKA 4BY7C 4YFNA 1K83C 4XLNA 3HOWC 4GZYA 5FLMC 4A3LC 3GTQK 5IYDC 4C3IC 5IYBC 4A3EC 2A68A 2E2JK 3HKZL 1R9TC 2R93K 4A3MK 4LJZA 2YU9C 4LK1A 5C4JC 1XPPA 2NVQK 4NOIA 3GTJC 2JA6K 1TWHK 2NVYK 4BXXK 4Y52K 4KN7A 1BDFA 3K7AC 3HKZD 4BBSC 3K7AK 4BBSK 2E2HC 4Y52C 2VUMC 4BXXC 2BE5A 2NVXC 3RZOC 3CQZK 4KN4A 2NVQC 4Y7NK 2E2IK 3PO3K 3GTOC 1SMYA 4C3IK 3GTLC 1K83K 1SFOK 4A3FK 1TWHC 1I6VA 4JK1A 4C3JC 4C3JK 4A3KC 2YU9K 2A6EA 2B63K 4A3MC 3S1MC 3S1MK 2E2IC 4Y7NC 3PO3C 5FLMK 4A3LK 2B63C 4BY7K 4BBRC 1I6HC 3I4NC 3PO2C 3CQZC 4MEXA 2JA8C 1Y1VK 2NVXK 4A3FC 3HOYK 1SFOC 3RZOK 4G7OA 4XSZA 2R7ZC 3S14C 3S15K 3GTLK 2PMZL 3GTOK 3S2DK 3H3VD 2R92K 4XSXA 2JA6C 3GTJK 1I3QK 3GTPC 4A93C 4XLPA 2R93C 1R9TK 2WAQL 2VUMK 1WCMK 2E2HK 3GTQC 4BY1C 1TWGK 2O5IA 4A3JC 4G7HA 3M4OC 1TWAC 2NVYC 4A3IK 4G7ZA 4OINA 2JA5C 4AYBD 3S1NC 4OIQA 1IW7A 4OIRA 5C4JK 4A3DK 4Q4ZA 2PMZD 2E2JC 5IYBK 4A3BC 5M3FK 4A3EK 5IYDK 1YNJA 3S17K 5C44C 3HOWK 3HOZC 3S16C 4C2MK 3S1QC 2CW0A 3I4MC 4Q5SA 2PPBA 1I50K 4X6AC 5IP7K 2A69A 2PA8L 4MQ9A 3DXJA 5IYCK 3GTMK 3HOXK 3FKIK 3S2HC 3FKIC 2WB1D 3GTKK 5TMFA 2JA7C 4C3HK 5M5YK 3HOVK 4MEYA 4A3GC 5C4XC 3M3YC 3H0GK 4AYBL 2WAQD 3HOZK 1TWFK 5C4XK 5FJ8K 3HOUK 4A3BK 5M5WK 4C3HC 3S1RK 1HQMA 3RZDK 3H3VL 1Y1WC 1YNNA 3HOVC 3GTMC 2NVTK 5C3EK 3EQLA 1TWCK 1I50C 2O5JA 2Y0SL 1TWCC 2PA8D 5TMCA 4A3IC 4C2MC 2NVTC 4LK0A 4QJVA 3GTGC 1TWAK 5IP9K 1TWGC 4BY1K 1WCMC 4A3CK 4A3CC 2WB1L 4QIWD 1TWFC 5IP9C 4A93K 5M5XK 3GTGK 4QJVB 3H0GC 2JA5K 2A6HA 2R92C 1ZYRA 4LLGA 4A3GK 5C3EC 4A3JK 4ZH4A 4QIWL 1Y1WK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RZD C;  3HOX C;  3S1R C;  5IYC C;  3HOY C;  3HOU C;  3S15 C;  4X6A K;  5IP7 C;  1Y1V C;  4YG2 A;  4OIO A;  3I4M K;  3PO2 K;  3GTP K;  4YFX A;  1I6H K;  1I3Q C;  3S16 K;  5M3M K;  3M3Y K;  5C44 K;  3S17 C;  3S2D C;  2JA7 K;  3GTK C;  3WOD A;  3S2H K;  2Y0S D;  4A3D C;  2R7Z K;  3S14 K;  4OIP A;  4A3K K;  3S1N K;  2JA8 K;  4KMU A;  3I4N K;  5D4D A;  3S1Q K;  4BBR K;  3M4O K;  4YFK A;  4BY7 C;  4YFN A;  1K83 C;  4XLN A;  3HOW C;  4GZY A;  5FLM C;  4A3L C;  3GTQ K;  5IYD C;  4C3I C;  5IYB C;  4A3E C;  2A68 A;  2E2J K;  3HKZ L;  1R9T C;  2R93 K;  4A3M K;  4LJZ A;  2YU9 C;  4LK1 A;  5C4J C;  1XPP A;  2NVQ K;  4NOI A;  3GTJ C;  2JA6 K;  1TWH K;  2NVY K;  4BXX K;  4Y52 K;  4KN7 A;  1BDF A;  3K7A C;  3HKZ D;  4BBS C;  3K7A K;  4BBS K;  2E2H C;  4Y52 C;  2VUM C;  4BXX C;  2BE5 A;  2NVX C;  3RZO C;  3CQZ K;  4KN4 A;  2NVQ C;  4Y7N K;  2E2I K;  3PO3 K;  3GTO C;  1SMY A;  4C3I K;  3GTL C;  1K83 K;  1SFO K;  4A3F K;  1TWH C;  1I6V A;  4JK1 A;  4C3J C;  4C3J K;  4A3K C;  2YU9 K;  2A6E A;  2B63 K;  4A3M C;  3S1M C;  3S1M K;  2E2I C;  4Y7N C;  3PO3 C;  5FLM K;  4A3L K;  2B63 C;  4BY7 K;  4BBR C;  1I6H C;  3I4N C;  3PO2 C;  3CQZ C;  4MEX A;  2JA8 C;  1Y1V K;  2NVX K;  4A3F C;  3HOY K;  1SFO C;  3RZO K;  4G7O A;  4XSZ A;  2R7Z C;  3S14 C;  3S15 K;  3GTL K;  2PMZ L;  3GTO K;  3S2D K;  3H3V D;  2R92 K;  4XSX A;  2JA6 C;  3GTJ K;  1I3Q K;  3GTP C;  4A93 C;  4XLP A;  2R93 C;  1R9T K;  2WAQ L;  2VUM K;  1WCM K;  2E2H K;  3GTQ C;  4BY1 C;  1TWG K;  2O5I A;  4A3J C;  4G7H A;  3M4O C;  1TWA C;  2NVY C;  4A3I K;  4G7Z A;  4OIN A;  2JA5 C;  4AYB D;  3S1N C;  4OIQ A;  1IW7 A;  4OIR A;  5C4J K;  4A3D K;  4Q4Z A;  2PMZ D;  2E2J C;  5IYB K;  4A3B C;  5M3F K;  4A3E K;  5IYD K;  1YNJ A;  3S17 K;  5C44 C;  3HOW K;  3HOZ C;  3S16 C;  4C2M K;  3S1Q C;  2CW0 A;  3I4M C;  4Q5S A;  2PPB A;  1I50 K;  4X6A C;  5IP7 K;  2A69 A;  2PA8 L;  4MQ9 A;  3DXJ A;  5IYC K;  3GTM K;  3HOX K;  3FKI K;  3S2H C;  3FKI C;  2WB1 D;  3GTK K;  5TMF A;  2JA7 C;  4C3H K;  5M5Y K;  3HOV K;  4MEY A;  4A3G C;  5C4X C;  3M3Y C;  3H0G K;  4AYB L;  2WAQ D;  3HOZ K;  1TWF K;  5C4X K;  5FJ8 K;  3HOU K;  4A3B K;  5M5W K;  4C3H C;  3S1R K;  1HQM A;  3RZD K;  3H3V L;  1Y1W C;  1YNN A;  3HOV C;  3GTM C;  2NVT K;  5C3E K;  3EQL A;  1TWC K;  1I50 C;  2O5J A;  2Y0S L;  1TWC C;  2PA8 D;  5TMC A;  4A3I C;  4C2M C;  2NVT C;  4LK0 A;  4QJV A;  3GTG C;  1TWA K;  5IP9 K;  1TWG C;  4BY1 K;  1WCM C;  4A3C K;  4A3C C;  2WB1 L;  4QIW D;  1TWF C;  5IP9 C;  4A93 K;  5M5X K;  3GTG K;  4QJV B;  3H0G C;  2JA5 K;  2A6H A;  2R92 C;  1ZYR A;  4LLG A;  4A3G K;  5C3E C;  4A3J K;  4ZH4 A;  4QIW L;  1Y1W K; 
#chains in the Genus database with same CATH topology
 1EK8 A;  3RZD C;  2FQT A;  3DLL S;  1JVI A;  1XZQ A;  4OIO A;  1I6H K;  1VRQ C;  5M3M K;  3S2D C;  3S2H K;  4KMH A;  1XZP B;  1WOS A;  3OEP A;  4KM9 A;  3S1Q K;  4GTL A;  4BY7 C;  3M4O K;  3HOW C;  4GTA A;  4A3L C;  1ZVU A;  3FHZ A;  4C3I C;  2R93 K;  1ZQ1 C;  1XPP A;  2NVQ K;  2JA6 K;  4BXX K;  4Y52 K;  1WQF A;  5CJ9 A;  3K7A C;  1PJ7 A;  1I3Q A;  3GIR A;  2XCQ A;  4KN4 A;  4M1X A;  3LYW A;  3TFI A;  3PO3 K;  3GTO C;  1O2F B;  1K83 K;  1SFO K;  4C3J K;  4C3J C;  2NVX A;  3CAG A;  3GTL A;  4IOC S;  3PO3 C;  4A3L K;  4BY7 K;  1BGW A;  1AB4 A;  2RGR A;  1Y1V K;  4KB4 A;  3HOY K;  2D6F C;  4G7O A;  4XSZ A;  3GSI A;  2P8T A;  2PMZ L;  4BLA A;  3S2D K;  2R92 K;  4XSX A;  2JA6 C;  1EQR A;  3ERE D;  4RMF A;  1JOE A;  4XLP A;  2R93 C;  1USM A;  4KAT A;  2VUM K;  2ZJQ S;  4G7H A;  3M4O C;  1EI6 A;  2NVY C;  4OIQ A;  5C4J K;  2E2J C;  5M3F K;  5IYD K;  4GTF A;  3HOZ C;  4O2D A;  4Q5S A;  1I50 K;  4MQ9 A;  3TTG A;  3FKI K;  3FKI C;  3GTK K;  5M5Y K;  3A8K A;  1O24 A;  1FEU A;  3A8J A;  1L0W A;  3HOZ K;  5C4X K;  4WJ3 M;  2KXY A;  1HQM A;  3H3V L;  1Y1W C;  1YNN A;  1R9T A;  5C3E K;  2E2H A;  1TWC K;  2O5J A;  3QX3 A;  3GTG C;  4LK0 A;  4DDQ A;  2JH3 A;  4A3C C;  2WB1 L;  3ADA C;  2JA6 A;  4QIW D;  1EH1 A;  5IP9 C;  3GTP A;  2R92 C;  3BUE A;  2L3U A;  1PJ5 A;  3SZY A;  2JA7 A;  4ZH4 A;  3HOV K;  2KWA A;  3HOY C;  4X6A K;  1Y1V C;  1I3Q C;  2W7V A;  1WSR A;  3M3Y K;  5C44 K;  3S0X A;  3H0G A;  1WQG A;  4P5A A;  1WIH A;  2Y0S D;  3T01 A;  3AD9 C;  1O2A A;  4OIP A;  4KAW X;  3I4N K;  4YFK A;  3AD8 C;  1K83 C;  3GEI A;  4GZY A;  5HL8 A;  1IBA A;  2A68 A;  2ZUE A;  3CQZ A;  4WIL A;  4LOW A;  3GTJ C;  1TWH K;  2Y3P A;  3N3Y A;  1BDF A;  3K7A K;  3LAJ A;  2R92 A;  3NUH A;  2GSO A;  4Y52 C;  4BXX C;  5EGH A;  1INN A;  2NVQ C;  2YU9 A;  4KAR A;  2ZJP S;  4C3I K;  1DCH A;  3FOE A;  2A6E A;  4A3M C;  3S1M K;  2E2I C;  4Y7N C;  3LAP A;  2B63 C;  4BBR C;  1I6H C;  1XZQ B;  2JA8 C;  2NVX K;  3RZO K;  4A3F C;  1IQ0 A;  3GTK A;  3S14 C;  3GTL K;  2RH6 A;  4ILD A;  1R9T K;  1HI9 A;  2WAQ L;  2E2H K;  3GTQ C;  4BY1 C;  1TWG K;  4OIN A;  1PJ6 A;  1C0A A;  1IW7 A;  4OIR A;  4A3D K;  3JST A;  4Q4Z A;  2VUM A;  4A3E K;  5IYB K;  1YNJ A;  3S17 K;  3T00 A;  4KDD A;  3S16 C;  1TWF A;  5IP7 K;  3AQO A;  3GEH A;  3HOX K;  1ZBS A;  1G51 A;  4WFB S;  2JA7 C;  3Q3Q A;  1GE9 A;  4WCE S;  1DD5 A;  3H0G K;  5FJ8 K;  1I50 A;  3HOU K;  5M5W K;  4C3H C;  1WSV A;  4GT9 A;  3S1R K;  1IE0 A;  3GTM C;  2NVT K;  2PA8 D;  4A3I C;  4C2M C;  5JFE A;  4QJV A;  1YX2 A;  1Y1W A;  2V6U A;  1WCM C;  1XZP A;  3G4C A;  1TWF C;  5M5X K;  1RU0 A;  2JA5 K;  1ZYR A;  4LLG A;  4A3G K;  3CF5 S;  3LPX A;  4A3J K;  4P5B A;  3S1R C;  5IYC C;  3HOU C;  4U67 S;  3I4M K;  4KM8 A;  3GTP K;  4YFX A;  5TJ3 A;  4KMA A;  2JA7 K;  3WOD A;  3T02 A;  2FQO A;  2R7Z K;  3AH5 A;  3BP3 A;  3GDZ A;  4A3K K;  3S1N K;  4KMU A;  1KQ4 A;  5D4D A;  1BS2 A;  4XLN A;  5FLM C;  1TWA A;  5IYB C;  4A3E C;  4BKW A;  2YU9 C;  4LK1 A;  1UV7 A;  3AD7 C;  3G4A A;  3HKZ D;  4BBS C;  1VH2 A;  3V4G A;  2E2H C;  1B4B A;  1WOR A;  3CQZ K;  4PAB A;  1TWH A;  3GEE A;  3A8I A;  2L5N A;  3GTL C;  5IOS A;  5HQH A;  4A3F K;  2GSN A;  2YU9 K;  2B63 K;  3S1M C;  4IO9 S;  3GTO A;  5FLM K;  3PO2 C;  3CQZ C;  4MEX A;  3S15 K;  2R7Z C;  2NVY A;  3ORE A;  5JVG S;  3GTP C;  1O27 A;  4A93 C;  3VA7 A;  2GAH C;  2O5I A;  2E2I A;  4A3J C;  4G0V A;  4C45 A;  1TWA C;  4G7Z A;  5IOR A;  4KB2 A;  2JA5 C;  3S1N C;  3L4K A;  1USO A;  4WFN S;  4J3N A;  1EFW A;  4A3B C;  2ZJR S;  2JA5 A;  1TWG A;  4C2M K;  2CW0 A;  3IPJ A;  3I4M C;  4WF9 S;  2PPB A;  5IYC K;  3MML B;  4AH6 A;  1XXB A;  5IOQ A;  3GTM K;  1X31 C;  5DM6 S;  4C3H K;  4FM9 A;  4A3G C;  3M3Y C;  4AYB L;  2WAQ D;  2XCO A;  1TWF K;  3GTJ A;  2R7Z A;  4A3B K;  2KQ1 A;  1J6V A;  3HOV C;  1DCP A;  1WCM A;  5CHP A;  3SZZ A;  5EGE A;  1V5V A;  4KMD A;  1XXA A;  1TWA K;  2NVT C;  4IOA S;  5HL7 S;  1VLO A;  5IP9 K;  3PIO S;  4A3C K;  3AQP A;  4LQY A;  1O25 A;  4A93 K;  5L46 A;  1O26 A;  4QJV B;  3GTG K;  3H0G C;  1JQW A;  5C3E C;  4KC6 A;  4WFA S;  1Y1W K;  3HOX C;  3S15 C;  2ZUF A;  5IP7 C;  3PO2 K;  4YG2 A;  3HXA A;  4KAS A;  3S16 K;  3S17 C;  5E68 A;  3GTK C;  1ZXO A;  2PHC B;  4PAA A;  4A3D C;  3S14 K;  4P9S A;  1VJE A;  2JA8 K;  1J6X A;  4BBR K;  1F7U A;  4YFN A;  4GTE A;  3GTQ K;  5IYD C;  2E2J K;  3HKZ L;  1R9T C;  4A3M K;  2V6S A;  4LJZ A;  1YCL A;  5C4J C;  4NOI A;  2EBB A;  2NVY K;  4KN7 A;  1J98 A;  3TFJ A;  4BBS K;  1K83 A;  1SFO A;  2VUM C;  2BE5 A;  2NVX C;  3RZO C;  4BLB A;  3N0B A;  4LR2 A;  3FOF A;  1O28 A;  4Y7N K;  2E2I K;  1SMY A;  4WJ4 A;  3BP8 C;  3PIP S;  2GSU A;  1TWH C;  1I6V A;  4JK1 A;  4A3K C;  2P5M A;  1WOP A;  4GTD A;  1DCO A;  2CFA A;  2KPU A;  3GTM A;  2R93 A;  3I4N C;  1SFO C;  2V6T A;  2B63 A;  3GTO K;  2XCR B;  3H3V D;  3GTJ K;  2ZFZ A;  1B4A A;  1I3Q K;  2GAG C;  1XXC A;  1WCM K;  2CFA B;  1VGX A;  4A3I K;  4GTB A;  4AYB D;  3OPF A;  3FKI A;  3L4J A;  2PMZ D;  3GTG A;  5DM7 S;  5C44 C;  3N0C A;  4G0W A;  4G0U A;  3HOW K;  3S1Q C;  1J6W A;  5JVO A;  4X6A C;  2A69 A;  2PA8 L;  3DXJ A;  1Y1V A;  3S2H C;  2WB1 D;  1ISE A;  5TMF A;  4GFQ A;  1TWC A;  4MEY A;  5C4X C;  4FZB A;  1O29 A;  5IOT A;  1WOO A;  1WQH A;  1O2B A;  4GTC A;  1IL2 A;  3RZD K;  1F9N A;  5JVH S;  3EQL A;  1I50 C;  3GTQ A;  2Y0S L;  1TWC C;  5TMC A;  4XCH A;  3TFH A;  1F93 A;  1TWG C;  4BY1 K;  1BJT A;  1F7V A;  2A6H A;  1IS1 A;  4QIW L; 
#chains in the Genus database with same CATH homology
 3RZD C;  3HOX C;  3S1R C;  5IYC C;  3HOY C;  3HOU C;  3S15 C;  4X6A K;  5IP7 C;  1Y1V C;  4YG2 A;  4OIO A;  3I4M K;  3PO2 K;  3GTP K;  4YFX A;  1I6H K;  1I3Q C;  3S16 K;  5M3M K;  3M3Y K;  5C44 K;  3S17 C;  3S2D C;  2JA7 K;  3GTK C;  3WOD A;  3S2H K;  2Y0S D;  4A3D C;  2R7Z K;  3S14 K;  4OIP A;  4A3K K;  3S1N K;  2JA8 K;  4KMU A;  3I4N K;  5D4D A;  3S1Q K;  4BBR K;  3M4O K;  4YFK A;  4BY7 C;  4YFN A;  1K83 C;  4XLN A;  3HOW C;  4GZY A;  5FLM C;  4A3L C;  3GTQ K;  5IYD C;  4C3I C;  5IYB C;  4A3E C;  2A68 A;  2E2J K;  3HKZ L;  1R9T C;  2R93 K;  4A3M K;  4LJZ A;  2YU9 C;  4LK1 A;  5C4J C;  1XPP A;  2NVQ K;  4NOI A;  3GTJ C;  2JA6 K;  1TWH K;  2NVY K;  4BXX K;  4Y52 K;  4KN7 A;  1BDF A;  3K7A C;  3HKZ D;  4BBS C;  3K7A K;  4BBS K;  2E2H C;  4Y52 C;  2VUM C;  4BXX C;  2BE5 A;  2NVX C;  3RZO C;  3CQZ K;  4KN4 A;  2NVQ C;  4Y7N K;  2E2I K;  3PO3 K;  3GTO C;  1SMY A;  4C3I K;  3GTL C;  1K83 K;  1SFO K;  4A3F K;  1TWH C;  1I6V A;  4JK1 A;  4C3J C;  4C3J K;  4A3K C;  2YU9 K;  2A6E A;  2B63 K;  4A3M C;  3S1M C;  3S1M K;  2E2I C;  4Y7N C;  3PO3 C;  5FLM K;  4A3L K;  2B63 C;  4BY7 K;  4BBR C;  1I6H C;  3I4N C;  3PO2 C;  3CQZ C;  4MEX A;  2JA8 C;  1Y1V K;  2NVX K;  4A3F C;  3HOY K;  1SFO C;  3RZO K;  4G7O A;  4XSZ A;  2R7Z C;  3S14 C;  3S15 K;  3GTL K;  2PMZ L;  3GTO K;  3S2D K;  3H3V D;  2R92 K;  4XSX A;  2JA6 C;  3GTJ K;  1I3Q K;  3GTP C;  4A93 C;  4XLP A;  2R93 C;  1R9T K;  2WAQ L;  2VUM K;  1WCM K;  2E2H K;  3GTQ C;  4BY1 C;  1TWG K;  2O5I A;  4A3J C;  4G7H A;  3M4O C;  1TWA C;  2NVY C;  4A3I K;  4G7Z A;  4OIN A;  2JA5 C;  4AYB D;  3S1N C;  4OIQ A;  1IW7 A;  4OIR A;  5C4J K;  4A3D K;  4Q4Z A;  2PMZ D;  2E2J C;  5IYB K;  4A3B C;  5M3F K;  4A3E K;  5IYD K;  1YNJ A;  3S17 K;  5C44 C;  3HOW K;  3HOZ C;  3S16 C;  4C2M K;  3S1Q C;  2CW0 A;  3I4M C;  4Q5S A;  2PPB A;  1I50 K;  4X6A C;  5IP7 K;  2A69 A;  2PA8 L;  4MQ9 A;  3DXJ A;  5IYC K;  3GTM K;  3HOX K;  3FKI K;  3S2H C;  3FKI C;  2WB1 D;  3GTK K;  5TMF A;  2JA7 C;  4C3H K;  5M5Y K;  3HOV K;  4MEY A;  4A3G C;  5C4X C;  3M3Y C;  3H0G K;  4AYB L;  2WAQ D;  3HOZ K;  1TWF K;  5C4X K;  5FJ8 K;  3HOU K;  4A3B K;  5M5W K;  4C3H C;  3S1R K;  1HQM A;  3RZD K;  3H3V L;  1Y1W C;  1YNN A;  3HOV C;  3GTM C;  2NVT K;  5C3E K;  3EQL A;  1TWC K;  1I50 C;  2O5J A;  2Y0S L;  1TWC C;  2PA8 D;  5TMC A;  4A3I C;  4C2M C;  2NVT C;  4LK0 A;  4QJV A;  3GTG C;  1TWA K;  5IP9 K;  1TWG C;  4BY1 K;  1WCM C;  4A3C K;  4A3C C;  2WB1 L;  4QIW D;  1TWF C;  5IP9 C;  4A93 K;  5M5X K;  3GTG K;  4QJV B;  3H0G C;  2JA5 K;  2A6H A;  2R92 C;  1ZYR A;  4LLG A;  4A3G K;  5C3E C;  4A3J K;  4ZH4 A;  4QIW L;  1Y1W K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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