2NVQC

Rna polymerase ii elongation complex in 150 mm mg+2 with 2'dutp
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
publication title Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
total genus 53
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2006-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2nvqC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2nvqC01
2PA8L 4Y7NC 3RZDC 2R92C 2NVYK 4A3MK 4YFKA 3H0GC 2WAQL 4LK1A 1Y1VK 4KN7A 3M4OK 3K7AC 3HOXK 4KN4A 3FKIC 2A69A 3I4NC 2O5JA 2Y0SL 3S1RK 1I6VA 3CQZK 2R7ZC 2R7ZK 4BY7K 3GTQK 1YNJA 3S16C 2O5IA 2R92K 3RZDK 3PO2K 1ZYRA 1I50C 4LJZA 4A3DC 5IYCC 1XPPA 3S15K 2PMZD 3HOVK 3S14C 1WCMC 3PO3C 3HKZD 5TMFA 3FKIK 3GTMC 5M3MK 1TWHC 3M3YC 3WODA 4A3EC 2WB1D 3GTOC 4GZYA 1TWFC 5C4JC 2JA6C 4XSZA 3I4MK 1I50K 2PMZL 5IP9C 5IYBC 3HKZL 3S14K 4C3IK 2A6HA 4KMUA 4A93K 2BE5A 4QIWD 2PPBA 2YU9C 3S1MK 4A3IC 1Y1WC 4NOIA 4AYBD 2WB1L 3HOUC 4BBSC 4A3EK 2JA5K 3GTOK 3M3YK 1TWFK 5C4JK 4X6AC 4JK1A 4OINA 5IYBK 4BBRC 4A3CK 4A3JC 3S2DK 2NVTC 3GTLC 3S1NC 3HOWC 4A3GC 3HOYK 3S2HK 3S17K 1TWAC 4XLNA 4A3KC 5C4XC 5M3FK 4C3JC 5C44C 4Y7NK 3HOUK 1TWGC 4BY7C 3H0GK 4QJVA 5IYDC 2NVXC 1BDFA 4C3HC 4BXXC 4OIOA 4A3LC 2A68A 3K7AK 4BBRK 1I6HC 4A3JK 1SFOC 3S1NK 3HOWK 3I4NK 2E2HC 5M5WK 4G7HA 3S16K 4A3KK 1TWCC 3GTKC 4MQ9A 2NVQC 4YFXA 3GTGC 1TWGK 2E2IC 4A3DK 5M5YK 5IYCK 1I3QC 3GTJC 4Q4ZA 4Y52C 4YFNA 4C2MC 2NVXK 4C3HK 1WCMK 3GTPC 3PO3K 3H3VD 4A3BC 1I6HK 1SFOK 3GTMK 3S1QC 1R9TC 1TWHK 1YNNA 4LK0A 2JA8C 5FLMC 3GTKK 2JA6K 5C3EC 2VUMC 4ZH4A 4XLPA 5IP9K 4BY1C 3HOZC 3GTJK 5IP7C 3DXJA 3H3VL 4QIWL 2JA7C 4A3BK 2YU9K 4AYBL 4A3IK 1Y1WK 1R9TK 2E2JC 4BBSK 2PA8D 1IW7A 5FLMK 5C3EK 2VUMK 4X6AK 3RZOC 5FJ8K 1Y1VC 2B63C 3HOZK 2WAQD 5IP7K 3M4OC 2NVTK 3GTLK 4A3GK 4LLGA 3HOXC 1K83C 3S1RC 1TWAK 2CW0A 3CQZC 4QJVB 5C4XK 4C3JK 4A3FC 5C44K 5TMCA 3PO2C 5IYDK 3RZOK 3S15C 4BXXK 2B63K 4A3LK 3HOVC 4XSXA 4OIPA 2E2HK 1K83K 2E2JK 4MEYA 2R93C 4OIRA 1TWCK 2NVQK 4A3FK 3GTGK 2E2IK 1I3QK 3I4MC 4Y52K 2A6EA 4C2MK 3GTPK 4C3IC 4YG2A 5D4DA 4G7ZA 1SMYA 4MEXA 4A93C 3S1QK 4OIQA 3S1MC 2R93K 5M5XK 2JA8K 4Q5SA 2NVYC 4A3MC 2JA5C 4G7OA 4BY1K 3EQLA 1HQMA 4A3CC 2JA7K 3S2DC 3S2HC 3HOYC 3S17C 2Y0SD 3GTQC
chains in the Genus database with same CATH superfamily
5HQHA 2KWAA 2L5NA 3M4OK 1GE9A 3SZZA 2O5JA 1IBAA 3S16C 2PHCB 3GTMA 3RZDK 1L0WA 1I50C 4A3DC 5IYCC 1XPPA 3N3YA 3GTKA 1FEUA 1JQWA 3A8IA 4A3EC 4KC6A 2YU9A 4GZYA 3I4MK 3TTGA 1BS2A 2PPBA 2GAGC 1ZVUA 4FM9A 3HOUC 3FOEA 1BGWA 1TWFK 5C4JK 4X6AC 1B4AA 4JK1A 1WSRA 4GTLA 3L4KA 4OINA 3LYWA 5IYBK 4WJ4A 3FHZA 4A3GC 3GTLC 2B63A 3GEIA 1TWAC 4XLNA 4C3JC 5C44C 2ZUEA 1O2BA 2KPUA 3DLLS 3BP3A 5IYDC 2NVXC 1DD5A 4C3HC 3GTGA 3K7AK 4A3JK 1SFOC 3S1NK 3HOWK 3I4NK 2E2HC 4G7HA 4A3KK 2NVQC 1AB4A 4YFXA 1TWGK 2R93A 3GTJC 3BUEA 1O26A 5TJ3A 3GTPC 3H3VD 4A3BC 4GTBA 3G4AA 4U67S 4P9SA 2FQOA 2L3UA 3T02A 2ZUFA 5IP9K 3DXJA 3H3VL 4QIWL 4AYBL 5IOSA 4A3IK 2PA8D 1IW7A 3S0XA 5FLMK 2R7ZA 1PJ5A 3BP8C 3HOZK 5IP7K 3M4OC 3A8KA 5CHPA 1ZXOA 4LLGA 3PIPS 5HL8A 5C4XK 4A3FC 1IS1A 4GFQA 1EQRA 1F93A 4A3LK 1I50A 4O2DA 4OIPA 1K83K 2P5MA 4MEYA 1O25A 4OIRA 3LAPA 2E2IK 1DCHA 3I4MC 4Y52K 1VGXA 4KB4A 2XCRB 5D4DA 3S1QK 1B4BA 5M5XK 2JA8K 1O28A 3Q3QA 3H0GA 1RU0A 2JA7K 1X31C 3GTQC 2V6TA 4G0WA 2NVYK 1DCPA 2FQTA 3K7AC 3HOXK 3FKIC 1WOSA 2A69A 4RMFA 3I4NC 1WCMA 3S1RK 1EFWA 2NVXA 4WF9S 1SFOA 1YNJA 2O5IA 5JVOA 1TWHA 5EGEA 2R92K 3GTOA 4LQYA 4LOWA 2JA6A 3HOVK 4ILDA 3OREA 3GTJA 5JVHS 4IOAS 1Y1WA 2EBBA 5IP9C 4KMAA 1USOA 1ZQ1C 4FZBA 3S14K 2BE5A 4G0UA 4A3IC 4NOIA 3M3YK 3GTOK 4KM9A 1YCLA 3HOYK 1ZBSA 3JSTA 4GTAA 5C4XC 4Y7NK 1XXBA 1TWCA 3QX3A 3OEPA 1G51A 4OIOA 4A3LC 1I3QA 4BBRK 1USMA 1VH2A 1EH1A 2E2IC 4BY7K 4PAAA 4Q4ZA 4Y52C 4YFNA 2VUMA 3PO3K 1I6HK 3GTMK 1WORA 3S1QC 1R9TC 3GSIA 4WJ3M 2ZFZA 2JA8C 4LK0A 3GEEA 1J6XA 3GTKK 5C3EC 2JA7C 1Y1VA 2YU9K 5CJ9A 3CQZA 2VUMK 3GTQA 1UV7A 2WAQD 2JH3A 2NVTK 2ZJQS 3HOXC 4GTFA 3S1RC 3FKIA 1XZPA 1O27A 2GAHC 3RZOK 2B63K 3HOVC 3T01A 4WFAS 3AD8C 1WQHA 1F7UA 4WFBS 3GTGK 1V5VA 1WQGA 2JA5A 3G4CA 4C2MK 3CAGA 1ISEA 1SMYA 4IOCS 2R93K 2RGRA 4GTEA 3AH5A 4WILA 4M1XA 3N0BA 3HOYC 1J6WA 2E2JK 2PA8L 3L4JA 4Y7NC 3RZDC 1EI6A 4A3MK 4J3NA 1WOOA 4KN7A 5DM6S 3NUHA 3TFIA 4KN4A 1XZPB 1IQ0A 1O2AA 2R7ZK 3VA7A 2Y3PA 3S15K 3PO3C 3HKZD 5TMFA 5E68A 3GTMC 5M3MK 1YX2A 1TWFC 5C4JC 1R9TA 4XSZA 4KMDA 1I50K 4DDQA 5IYBC 3HKZL 4C3IK 2A6HA 4AH6A 4KMUA 3N0CA 3V4GA 2ZJRS 2YU9C 3GTLA 1J6VA 4A3EK 1TWAA 2CFAA 4KB2A 4P5AA 5JVGS 4A3JC 2NVTC 4WFNS 3S1NC 3HOWC 3LAJA 2RH6A 4A3KC 2E2HA 5M3FK 3HOUK 1TWGC 3H0GK 1BDFA 2A68A 2GSNA 1WOPA 3GTPA 1HI9A 3ADAC 3GTGC 5M5YK 4C2MC 2NVXK 4G0VA 4C3HK 1WCMK 1SFOK 1WSVA 1TWHK 2D6FC 1YNNA 5FLMC 2JA6K 4LR2A 2XCOA 2V6SA 4XLPA 3GTJK 3HOZC 2GSOA 5IP7C 4KMHA 1VRQC 5JFEA 4A3BK 1F9NA 2CFAB 1Y1WK 2E2JC 4BBSK 5EGHA 5HL7S 4BLAA 5FJ8K 1BJTA 4PABA 1O2FB 1XXAA 1K83C 4KDDA 1KQ4A 2GSUA 3T00A 4WCES 5TMCA 1O29A 4BXXK 3S15C 1TWCK 3AD7C 3GIRA 4A3FK 2V6UA 5IORA 1PJ6A 1I3QK 2A6EA 3IPJA 3MMLB 1TWFA 4C3IC 4G7ZA 4MEXA 4Q5SA 2NVYC 1IE0A 4G7OA 4BY1K 3LPXA 3CF5S 2W7VA 2Y0SD 2R92C 3HXAA 4YFKA 2XCQA 3H0GC 2WAQL 4LK1A 1Y1VK 1J98A 1TWGA 4BKWA 3TFJA 1F7VA 2Y0SL 1I6VA 3CQZK 5L46A 3GTQK 4GT9A 1C0AA 4KASA 3PO2K 1ZYRA 4LJZA 2PMZD 3S14C 1WCMC 3FKIK 4KM8A 1TWHC 3M3YC 3WODA 3GTOC 2WB1D 5DM7S 1VLOA 2JA6C 3FOFA 2PMZL 4A93K 4QIWD 3S1MK 1Y1WC 4AYBD 2WB1L 4BBSC 2JA5K 4KATA 1XZQA 5IOQA 1VJEA 1EK8A 1WIHA 3GEHA 4BBRC 4A3CK 3AQPA 3S2DK 3S2HK 4GTCA 3ERED 4BLBA 3S17K 1K83A 1PJ7A 5IOTA 4C45A 4BY7C 3GDZA 4QJVA 4BXXC 2E2IA 1IL2A 1I6HC 5M5WK 3S16K 3AD9C 1TWCC 3GTKC 4MQ9A 4A3DK 5IYCK 1I3QC 4KARA 1O24A 2JA7A 2VUMC 4ZH4A 1JOEA 4BY1C 2NVYA 1XXCA 1XZQB 1R9TK 2ZJPS 5C3EK 4X6AK 3PIOS 2KXYA 3RZOC 1Y1VC 4IO9S 2B63C 1JVIA 2R92A 1DCOA 4A3GK 3GTLK 3SZYA 3A8JA 3TFHA 1TWAK 2CW0A 3CQZC 4QJVB 4C3JK 5C44K 4KAWX 3PO2C 5IYDK 2P8TA 1INNA 4XSXA 2E2HK 2R93C 2NVQK 3AQOA 3GTPK 4YG2A 3OPFA 4GTDA 4A93C 4OIQA 3S1MC 2KQ1A 2JA5C 4A3MC 1WQFA 4P5BA 3EQLA 1HQMA 4XCHA 4A3CC 3S2DC 3S2HC 2R7ZC 3S17C
chains in the Genus database with same CATH topology
2PA8L 4Y7NC 3RZDC 2R92C 2NVYK 4A3MK 4YFKA 3H0GC 2WAQL 4LK1A 1Y1VK 4KN7A 3M4OK 3K7AC 3HOXK 4KN4A 3FKIC 2A69A 3I4NC 2O5JA 2Y0SL 3S1RK 1I6VA 3CQZK 2R7ZC 2R7ZK 4BY7K 3GTQK 1YNJA 3S16C 2O5IA 2R92K 3RZDK 3PO2K 1ZYRA 1I50C 4LJZA 4A3DC 5IYCC 1XPPA 3S15K 2PMZD 3HOVK 3S14C 1WCMC 3PO3C 3HKZD 5TMFA 3FKIK 3GTMC 5M3MK 1TWHC 3M3YC 3WODA 4A3EC 2WB1D 3GTOC 4GZYA 1TWFC 5C4JC 2JA6C 4XSZA 3I4MK 1I50K 2PMZL 5IP9C 5IYBC 3HKZL 3S14K 4C3IK 2A6HA 4KMUA 4A93K 2BE5A 4QIWD 2PPBA 2YU9C 3S1MK 4A3IC 1Y1WC 4NOIA 4AYBD 2WB1L 3HOUC 4BBSC 4A3EK 2JA5K 3GTOK 3M3YK 1TWFK 5C4JK 4X6AC 4JK1A 4OINA 5IYBK 4BBRC 4A3CK 4A3JC 3S2DK 2NVTC 3GTLC 3S1NC 3HOWC 4A3GC 3HOYK 3S2HK 3S17K 1TWAC 4XLNA 4A3KC 5C4XC 5M3FK 4C3JC 5C44C 4Y7NK 3HOUK 1TWGC 4BY7C 3H0GK 4QJVA 5IYDC 2NVXC 1BDFA 4C3HC 4BXXC 4OIOA 4A3LC 2A68A 3K7AK 4BBRK 1I6HC 4A3JK 1SFOC 3S1NK 3HOWK 3I4NK 2E2HC 5M5WK 4G7HA 3S16K 4A3KK 1TWCC 3GTKC 4MQ9A 2NVQC 4YFXA 3GTGC 1TWGK 2E2IC 4A3DK 5M5YK 5IYCK 1I3QC 3GTJC 4Q4ZA 4Y52C 4YFNA 4C2MC 2NVXK 4C3HK 1WCMK 3GTPC 3PO3K 3H3VD 4A3BC 1I6HK 1SFOK 3GTMK 3S1QC 1R9TC 1TWHK 1YNNA 4LK0A 2JA8C 5FLMC 3GTKK 2JA6K 5C3EC 2VUMC 4ZH4A 4XLPA 5IP9K 4BY1C 3HOZC 3GTJK 5IP7C 3DXJA 3H3VL 4QIWL 2JA7C 4A3BK 2YU9K 4AYBL 4A3IK 1Y1WK 1R9TK 2E2JC 4BBSK 2PA8D 1IW7A 5FLMK 5C3EK 2VUMK 4X6AK 3RZOC 5FJ8K 1Y1VC 2B63C 3HOZK 2WAQD 5IP7K 3M4OC 2NVTK 3GTLK 4A3GK 4LLGA 3HOXC 1K83C 3S1RC 1TWAK 2CW0A 3CQZC 4QJVB 5C4XK 4C3JK 4A3FC 5C44K 5TMCA 3PO2C 5IYDK 3RZOK 3S15C 4BXXK 2B63K 4A3LK 3HOVC 4XSXA 4OIPA 2E2HK 1K83K 2E2JK 4MEYA 2R93C 4OIRA 1TWCK 2NVQK 4A3FK 3GTGK 2E2IK 1I3QK 3I4MC 4Y52K 2A6EA 4C2MK 3GTPK 4C3IC 4YG2A 5D4DA 4G7ZA 1SMYA 4MEXA 4A93C 3S1QK 4OIQA 3S1MC 2R93K 5M5XK 2JA8K 4Q5SA 2NVYC 4A3MC 2JA5C 4G7OA 4BY1K 3EQLA 1HQMA 4A3CC 2JA7K 3S2DC 3S2HC 3HOYC 3S17C 2Y0SD 3GTQC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PA8 L;  4Y7N C;  3RZD C;  2R92 C;  2NVY K;  4A3M K;  4YFK A;  3H0G C;  2WAQ L;  4LK1 A;  1Y1V K;  4KN7 A;  3M4O K;  3K7A C;  3HOX K;  4KN4 A;  3FKI C;  2A69 A;  3I4N C;  2O5J A;  2Y0S L;  3S1R K;  1I6V A;  3CQZ K;  2R7Z C;  2R7Z K;  4BY7 K;  3GTQ K;  1YNJ A;  3S16 C;  2O5I A;  2R92 K;  3RZD K;  3PO2 K;  1ZYR A;  1I50 C;  4LJZ A;  4A3D C;  5IYC C;  1XPP A;  3S15 K;  2PMZ D;  3HOV K;  3S14 C;  1WCM C;  3PO3 C;  3HKZ D;  5TMF A;  3FKI K;  3GTM C;  5M3M K;  1TWH C;  3M3Y C;  3WOD A;  4A3E C;  2WB1 D;  3GTO C;  4GZY A;  1TWF C;  5C4J C;  2JA6 C;  4XSZ A;  3I4M K;  1I50 K;  2PMZ L;  5IP9 C;  5IYB C;  3HKZ L;  3S14 K;  4C3I K;  2A6H A;  4KMU A;  4A93 K;  2BE5 A;  4QIW D;  2PPB A;  2YU9 C;  3S1M K;  4A3I C;  1Y1W C;  4NOI A;  4AYB D;  2WB1 L;  3HOU C;  4BBS C;  4A3E K;  2JA5 K;  3GTO K;  3M3Y K;  1TWF K;  5C4J K;  4X6A C;  4JK1 A;  4OIN A;  5IYB K;  4BBR C;  4A3C K;  4A3J C;  3S2D K;  2NVT C;  3GTL C;  3S1N C;  3HOW C;  4A3G C;  3HOY K;  3S2H K;  3S17 K;  1TWA C;  4XLN A;  4A3K C;  5C4X C;  5M3F K;  4C3J C;  5C44 C;  4Y7N K;  3HOU K;  1TWG C;  4BY7 C;  3H0G K;  4QJV A;  5IYD C;  2NVX C;  1BDF A;  4C3H C;  4BXX C;  4OIO A;  4A3L C;  2A68 A;  3K7A K;  4BBR K;  1I6H C;  4A3J K;  1SFO C;  3S1N K;  3HOW K;  3I4N K;  2E2H C;  5M5W K;  4G7H A;  3S16 K;  4A3K K;  1TWC C;  3GTK C;  4MQ9 A;  2NVQ C;  4YFX A;  3GTG C;  1TWG K;  2E2I C;  4A3D K;  5M5Y K;  5IYC K;  1I3Q C;  3GTJ C;  4Q4Z A;  4Y52 C;  4YFN A;  4C2M C;  2NVX K;  4C3H K;  1WCM K;  3GTP C;  3PO3 K;  3H3V D;  4A3B C;  1I6H K;  1SFO K;  3GTM K;  3S1Q C;  1R9T C;  1TWH K;  1YNN A;  4LK0 A;  2JA8 C;  5FLM C;  3GTK K;  2JA6 K;  5C3E C;  2VUM C;  4ZH4 A;  4XLP A;  5IP9 K;  4BY1 C;  3HOZ C;  3GTJ K;  5IP7 C;  3DXJ A;  3H3V L;  4QIW L;  2JA7 C;  4A3B K;  2YU9 K;  4AYB L;  4A3I K;  1Y1W K;  1R9T K;  2E2J C;  4BBS K;  2PA8 D;  1IW7 A;  5FLM K;  5C3E K;  2VUM K;  4X6A K;  3RZO C;  5FJ8 K;  1Y1V C;  2B63 C;  3HOZ K;  2WAQ D;  5IP7 K;  3M4O C;  2NVT K;  3GTL K;  4A3G K;  4LLG A;  3HOX C;  1K83 C;  3S1R C;  1TWA K;  2CW0 A;  3CQZ C;  4QJV B;  5C4X K;  4C3J K;  4A3F C;  5C44 K;  5TMC A;  3PO2 C;  5IYD K;  3RZO K;  3S15 C;  4BXX K;  2B63 K;  4A3L K;  3HOV C;  4XSX A;  4OIP A;  2E2H K;  1K83 K;  2E2J K;  4MEY A;  2R93 C;  4OIR A;  1TWC K;  2NVQ K;  4A3F K;  3GTG K;  2E2I K;  1I3Q K;  3I4M C;  4Y52 K;  2A6E A;  4C2M K;  3GTP K;  4C3I C;  4YG2 A;  5D4D A;  4G7Z A;  1SMY A;  4MEX A;  4A93 C;  3S1Q K;  4OIQ A;  3S1M C;  2R93 K;  5M5X K;  2JA8 K;  4Q5S A;  2NVY C;  4A3M C;  2JA5 C;  4G7O A;  4BY1 K;  3EQL A;  1HQM A;  4A3C C;  2JA7 K;  3S2D C;  3S2H C;  3HOY C;  3S17 C;  2Y0S D;  3GTQ C; 
#chains in the Genus database with same CATH topology
 5HQH A;  2KWA A;  2L5N A;  3M4O K;  1GE9 A;  3SZZ A;  2O5J A;  1IBA A;  3S16 C;  2PHC B;  3GTM A;  3RZD K;  1L0W A;  1I50 C;  4A3D C;  5IYC C;  1XPP A;  3N3Y A;  3GTK A;  1FEU A;  1JQW A;  3A8I A;  4A3E C;  4KC6 A;  2YU9 A;  4GZY A;  3I4M K;  3TTG A;  1BS2 A;  2PPB A;  2GAG C;  1ZVU A;  4FM9 A;  3HOU C;  3FOE A;  1BGW A;  1TWF K;  5C4J K;  4X6A C;  1B4A A;  4JK1 A;  1WSR A;  4GTL A;  3L4K A;  4OIN A;  3LYW A;  5IYB K;  4WJ4 A;  3FHZ A;  4A3G C;  3GTL C;  2B63 A;  3GEI A;  1TWA C;  4XLN A;  4C3J C;  5C44 C;  2ZUE A;  1O2B A;  2KPU A;  3DLL S;  3BP3 A;  5IYD C;  2NVX C;  1DD5 A;  4C3H C;  3GTG A;  3K7A K;  4A3J K;  1SFO C;  3S1N K;  3HOW K;  3I4N K;  2E2H C;  4G7H A;  4A3K K;  2NVQ C;  1AB4 A;  4YFX A;  1TWG K;  2R93 A;  3GTJ C;  3BUE A;  1O26 A;  5TJ3 A;  3GTP C;  3H3V D;  4A3B C;  4GTB A;  3G4A A;  4U67 S;  4P9S A;  2FQO A;  2L3U A;  3T02 A;  2ZUF A;  5IP9 K;  3DXJ A;  3H3V L;  4QIW L;  4AYB L;  5IOS A;  4A3I K;  2PA8 D;  1IW7 A;  3S0X A;  5FLM K;  2R7Z A;  1PJ5 A;  3BP8 C;  3HOZ K;  5IP7 K;  3M4O C;  3A8K A;  5CHP A;  1ZXO A;  4LLG A;  3PIP S;  5HL8 A;  5C4X K;  4A3F C;  1IS1 A;  4GFQ A;  1EQR A;  1F93 A;  4A3L K;  1I50 A;  4O2D A;  4OIP A;  1K83 K;  2P5M A;  4MEY A;  1O25 A;  4OIR A;  3LAP A;  2E2I K;  1DCH A;  3I4M C;  4Y52 K;  1VGX A;  4KB4 A;  2XCR B;  5D4D A;  3S1Q K;  1B4B A;  5M5X K;  2JA8 K;  1O28 A;  3Q3Q A;  3H0G A;  1RU0 A;  2JA7 K;  1X31 C;  3GTQ C;  2V6T A;  4G0W A;  2NVY K;  1DCP A;  2FQT A;  3K7A C;  3HOX K;  3FKI C;  1WOS A;  2A69 A;  4RMF A;  3I4N C;  1WCM A;  3S1R K;  1EFW A;  2NVX A;  4WF9 S;  1SFO A;  1YNJ A;  2O5I A;  5JVO A;  1TWH A;  5EGE A;  2R92 K;  3GTO A;  4LQY A;  4LOW A;  2JA6 A;  3HOV K;  4ILD A;  3ORE A;  3GTJ A;  5JVH S;  4IOA S;  1Y1W A;  2EBB A;  5IP9 C;  4KMA A;  1USO A;  1ZQ1 C;  4FZB A;  3S14 K;  2BE5 A;  4G0U A;  4A3I C;  4NOI A;  3M3Y K;  3GTO K;  4KM9 A;  1YCL A;  3HOY K;  1ZBS A;  3JST A;  4GTA A;  5C4X C;  4Y7N K;  1XXB A;  1TWC A;  3QX3 A;  3OEP A;  1G51 A;  4OIO A;  4A3L C;  1I3Q A;  4BBR K;  1USM A;  1VH2 A;  1EH1 A;  2E2I C;  4BY7 K;  4PAA A;  4Q4Z A;  4Y52 C;  4YFN A;  2VUM A;  3PO3 K;  1I6H K;  3GTM K;  1WOR A;  3S1Q C;  1R9T C;  3GSI A;  4WJ3 M;  2ZFZ A;  2JA8 C;  4LK0 A;  3GEE A;  1J6X A;  3GTK K;  5C3E C;  2JA7 C;  1Y1V A;  2YU9 K;  5CJ9 A;  3CQZ A;  2VUM K;  3GTQ A;  1UV7 A;  2WAQ D;  2JH3 A;  2NVT K;  2ZJQ S;  3HOX C;  4GTF A;  3S1R C;  3FKI A;  1XZP A;  1O27 A;  2GAH C;  3RZO K;  2B63 K;  3HOV C;  3T01 A;  4WFA S;  3AD8 C;  1WQH A;  1F7U A;  4WFB S;  3GTG K;  1V5V A;  1WQG A;  2JA5 A;  3G4C A;  4C2M K;  3CAG A;  1ISE A;  1SMY A;  4IOC S;  2R93 K;  2RGR A;  4GTE A;  3AH5 A;  4WIL A;  4M1X A;  3N0B A;  3HOY C;  1J6W A;  2E2J K;  2PA8 L;  3L4J A;  4Y7N C;  3RZD C;  1EI6 A;  4A3M K;  4J3N A;  1WOO A;  4KN7 A;  5DM6 S;  3NUH A;  3TFI A;  4KN4 A;  1XZP B;  1IQ0 A;  1O2A A;  2R7Z K;  3VA7 A;  2Y3P A;  3S15 K;  3PO3 C;  3HKZ D;  5TMF A;  5E68 A;  3GTM C;  5M3M K;  1YX2 A;  1TWF C;  5C4J C;  1R9T A;  4XSZ A;  4KMD A;  1I50 K;  4DDQ A;  5IYB C;  3HKZ L;  4C3I K;  2A6H A;  4AH6 A;  4KMU A;  3N0C A;  3V4G A;  2ZJR S;  2YU9 C;  3GTL A;  1J6V A;  4A3E K;  1TWA A;  2CFA A;  4KB2 A;  4P5A A;  5JVG S;  4A3J C;  2NVT C;  4WFN S;  3S1N C;  3HOW C;  3LAJ A;  2RH6 A;  4A3K C;  2E2H A;  5M3F K;  3HOU K;  1TWG C;  3H0G K;  1BDF A;  2A68 A;  2GSN A;  1WOP A;  3GTP A;  1HI9 A;  3ADA C;  3GTG C;  5M5Y K;  4C2M C;  2NVX K;  4G0V A;  4C3H K;  1WCM K;  1SFO K;  1WSV A;  1TWH K;  2D6F C;  1YNN A;  5FLM C;  2JA6 K;  4LR2 A;  2XCO A;  2V6S A;  4XLP A;  3GTJ K;  3HOZ C;  2GSO A;  5IP7 C;  4KMH A;  1VRQ C;  5JFE A;  4A3B K;  1F9N A;  2CFA B;  1Y1W K;  2E2J C;  4BBS K;  5EGH A;  5HL7 S;  4BLA A;  5FJ8 K;  1BJT A;  4PAB A;  1O2F B;  1XXA A;  1K83 C;  4KDD A;  1KQ4 A;  2GSU A;  3T00 A;  4WCE S;  5TMC A;  1O29 A;  4BXX K;  3S15 C;  1TWC K;  3AD7 C;  3GIR A;  4A3F K;  2V6U A;  5IOR A;  1PJ6 A;  1I3Q K;  2A6E A;  3IPJ A;  3MML B;  1TWF A;  4C3I C;  4G7Z A;  4MEX A;  4Q5S A;  2NVY C;  1IE0 A;  4G7O A;  4BY1 K;  3LPX A;  3CF5 S;  2W7V A;  2Y0S D;  2R92 C;  3HXA A;  4YFK A;  2XCQ A;  3H0G C;  2WAQ L;  4LK1 A;  1Y1V K;  1J98 A;  1TWG A;  4BKW A;  3TFJ A;  1F7V A;  2Y0S L;  1I6V A;  3CQZ K;  5L46 A;  3GTQ K;  4GT9 A;  1C0A A;  4KAS A;  3PO2 K;  1ZYR A;  4LJZ A;  2PMZ D;  3S14 C;  1WCM C;  3FKI K;  4KM8 A;  1TWH C;  3M3Y C;  3WOD A;  3GTO C;  2WB1 D;  5DM7 S;  1VLO A;  2JA6 C;  3FOF A;  2PMZ L;  4A93 K;  4QIW D;  3S1M K;  1Y1W C;  4AYB D;  2WB1 L;  4BBS C;  2JA5 K;  4KAT A;  1XZQ A;  5IOQ A;  1VJE A;  1EK8 A;  1WIH A;  3GEH A;  4BBR C;  4A3C K;  3AQP A;  3S2D K;  3S2H K;  4GTC A;  3ERE D;  4BLB A;  3S17 K;  1K83 A;  1PJ7 A;  5IOT A;  4C45 A;  4BY7 C;  3GDZ A;  4QJV A;  4BXX C;  2E2I A;  1IL2 A;  1I6H C;  5M5W K;  3S16 K;  3AD9 C;  1TWC C;  3GTK C;  4MQ9 A;  4A3D K;  5IYC K;  1I3Q C;  4KAR A;  1O24 A;  2JA7 A;  2VUM C;  4ZH4 A;  1JOE A;  4BY1 C;  2NVY A;  1XXC A;  1XZQ B;  1R9T K;  2ZJP S;  5C3E K;  4X6A K;  3PIO S;  2KXY A;  3RZO C;  1Y1V C;  4IO9 S;  2B63 C;  1JVI A;  2R92 A;  1DCO A;  4A3G K;  3GTL K;  3SZY A;  3A8J A;  3TFH A;  1TWA K;  2CW0 A;  3CQZ C;  4QJV B;  4C3J K;  5C44 K;  4KAW X;  3PO2 C;  5IYD K;  2P8T A;  1INN A;  4XSX A;  2E2H K;  2R93 C;  2NVQ K;  3AQO A;  3GTP K;  4YG2 A;  3OPF A;  4GTD A;  4A93 C;  4OIQ A;  3S1M C;  2KQ1 A;  2JA5 C;  4A3M C;  1WQF A;  4P5B A;  3EQL A;  1HQM A;  4XCH A;  4A3C C;  3S2D C;  3S2H C;  2R7Z C;  3S17 C; 
#chains in the Genus database with same CATH homology
 2PA8 L;  4Y7N C;  3RZD C;  2R92 C;  2NVY K;  4A3M K;  4YFK A;  3H0G C;  2WAQ L;  4LK1 A;  1Y1V K;  4KN7 A;  3M4O K;  3K7A C;  3HOX K;  4KN4 A;  3FKI C;  2A69 A;  3I4N C;  2O5J A;  2Y0S L;  3S1R K;  1I6V A;  3CQZ K;  2R7Z C;  2R7Z K;  4BY7 K;  3GTQ K;  1YNJ A;  3S16 C;  2O5I A;  2R92 K;  3RZD K;  3PO2 K;  1ZYR A;  1I50 C;  4LJZ A;  4A3D C;  5IYC C;  1XPP A;  3S15 K;  2PMZ D;  3HOV K;  3S14 C;  1WCM C;  3PO3 C;  3HKZ D;  5TMF A;  3FKI K;  3GTM C;  5M3M K;  1TWH C;  3M3Y C;  3WOD A;  4A3E C;  2WB1 D;  3GTO C;  4GZY A;  1TWF C;  5C4J C;  2JA6 C;  4XSZ A;  3I4M K;  1I50 K;  2PMZ L;  5IP9 C;  5IYB C;  3HKZ L;  3S14 K;  4C3I K;  2A6H A;  4KMU A;  4A93 K;  2BE5 A;  4QIW D;  2PPB A;  2YU9 C;  3S1M K;  4A3I C;  1Y1W C;  4NOI A;  4AYB D;  2WB1 L;  3HOU C;  4BBS C;  4A3E K;  2JA5 K;  3GTO K;  3M3Y K;  1TWF K;  5C4J K;  4X6A C;  4JK1 A;  4OIN A;  5IYB K;  4BBR C;  4A3C K;  4A3J C;  3S2D K;  2NVT C;  3GTL C;  3S1N C;  3HOW C;  4A3G C;  3HOY K;  3S2H K;  3S17 K;  1TWA C;  4XLN A;  4A3K C;  5C4X C;  5M3F K;  4C3J C;  5C44 C;  4Y7N K;  3HOU K;  1TWG C;  4BY7 C;  3H0G K;  4QJV A;  5IYD C;  2NVX C;  1BDF A;  4C3H C;  4BXX C;  4OIO A;  4A3L C;  2A68 A;  3K7A K;  4BBR K;  1I6H C;  4A3J K;  1SFO C;  3S1N K;  3HOW K;  3I4N K;  2E2H C;  5M5W K;  4G7H A;  3S16 K;  4A3K K;  1TWC C;  3GTK C;  4MQ9 A;  2NVQ C;  4YFX A;  3GTG C;  1TWG K;  2E2I C;  4A3D K;  5M5Y K;  5IYC K;  1I3Q C;  3GTJ C;  4Q4Z A;  4Y52 C;  4YFN A;  4C2M C;  2NVX K;  4C3H K;  1WCM K;  3GTP C;  3PO3 K;  3H3V D;  4A3B C;  1I6H K;  1SFO K;  3GTM K;  3S1Q C;  1R9T C;  1TWH K;  1YNN A;  4LK0 A;  2JA8 C;  5FLM C;  3GTK K;  2JA6 K;  5C3E C;  2VUM C;  4ZH4 A;  4XLP A;  5IP9 K;  4BY1 C;  3HOZ C;  3GTJ K;  5IP7 C;  3DXJ A;  3H3V L;  4QIW L;  2JA7 C;  4A3B K;  2YU9 K;  4AYB L;  4A3I K;  1Y1W K;  1R9T K;  2E2J C;  4BBS K;  2PA8 D;  1IW7 A;  5FLM K;  5C3E K;  2VUM K;  4X6A K;  3RZO C;  5FJ8 K;  1Y1V C;  2B63 C;  3HOZ K;  2WAQ D;  5IP7 K;  3M4O C;  2NVT K;  3GTL K;  4A3G K;  4LLG A;  3HOX C;  1K83 C;  3S1R C;  1TWA K;  2CW0 A;  3CQZ C;  4QJV B;  5C4X K;  4C3J K;  4A3F C;  5C44 K;  5TMC A;  3PO2 C;  5IYD K;  3RZO K;  3S15 C;  4BXX K;  2B63 K;  4A3L K;  3HOV C;  4XSX A;  4OIP A;  2E2H K;  1K83 K;  2E2J K;  4MEY A;  2R93 C;  4OIR A;  1TWC K;  2NVQ K;  4A3F K;  3GTG K;  2E2I K;  1I3Q K;  3I4M C;  4Y52 K;  2A6E A;  4C2M K;  3GTP K;  4C3I C;  4YG2 A;  5D4D A;  4G7Z A;  1SMY A;  4MEX A;  4A93 C;  3S1Q K;  4OIQ A;  3S1M C;  2R93 K;  5M5X K;  2JA8 K;  4Q5S A;  2NVY C;  4A3M C;  2JA5 C;  4G7O A;  4BY1 K;  3EQL A;  1HQM A;  4A3C C;  2JA7 K;  3S2D C;  3S2H C;  3HOY C;  3S17 C;  2Y0S D;  3GTQ C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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