5C4XC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule tags Transferase/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 44
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c4xC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c4xC01
3HKZL 4AYBD 4A3BC 3K7AK 4OIPA 5M5XK 4MEYA 3K7AC 4QIWD 3HOUK 2PA8D 1ZYRA 5IYBK 3HOZK 4A3DC 4C3JC 4A3EK 1TWAC 2A69A 3H3VD 2O5IA 3S1MC 3HOUC 2Y0SD 4LJZA 2NVYK 4C2MK 3H3VL 3GTKC 4BY7K 1R9TK 4MQ9A 3HKZD 3WODA 2JA5C 2NVQC 3GTQC 5IP9C 5IYDC 5C3EC 4G7OA 3S1NK 1R9TC 4A3FK 4XSXA 3GTQK 3RZOC 4A3IC 2WB1L 4G7ZA 4C3HK 1Y1VK 2Y0SL 2NVXK 1TWCK 2NVYC 1TWAK 1TWGK 5M5WK 3S1MK 3GTLK 2E2IK 3GTJC 3GTKK 2BE5A 4BY7C 1K83C 3GTOK 3S17K 1TWFK 1YNJA 3S14K 5C3EK 4A3LK 3GTOC 3S17C 1I3QK 1K83K 3GTGK 3HOYK 3PO3K 3RZOK 4BBRC 4A3IK 3M4OK 4BBSC 4XLPA 3HOYC 3PO2C 2A68A 3FKIK 3GTPK 5IYBC 5FLMK 4C3JK 4C3IK 3S2HC 3S16C 2CW0A 3GTJK 2E2JK 3HOXK 1Y1WK 1IW7A 3S16K 2VUMC 4A3CC 2B63K 3I4NC 5IP9K 3HOXC 1Y1WC 4ZH4A 2O5JA 2E2HK 4BY1C 5C4XC 5TMFA 4YG2A 4C2MC 2E2HC 2YU9C 3FKIC 3GTPC 5FLMC 3CQZC 2NVXC 3M3YK 1I6VA 1YNNA 2WAQD 4KN4A 2E2IC 4AYBL 2E2JC 4GZYA 3S15C 3HOVC 4LK1A 4A3CK 4QJVA 3I4NK 2NVTK 3RZDC 1TWHC 3S1RK 3S2DC 1Y1VC 5C44K 5C4XK 4YFKA 4BBRK 2NVTC 2WAQL 1TWGC 3EQLA 3S1RC 4Q5SA 3GTLC 1TWHK 2PMZD 4OIOA 5IP7K 4YFXA 2PMZL 2R7ZK 3H0GC 3GTMK 5IP7C 4A3LC 5M5YK 1WCMK 1I3QC 3GTGC 3PO3C 2VUMK 2B63C 3GTMC 3M4OC 5C4JC 4BY1K 4C3IC 2PA8L 4A3MK 2PPBA 2YU9K 4OIRA 2A6EA 4KN7A 4BXXK 5M3FK 3HOZC 3S1QK 1SFOC 4A93K 2R93K 1I50K 4A3KK 4X6AK 4KMUA 5D4DA 2JA7C 4QJVB 3HOVK 5IYCC 2JA5K 2NVQK 2JA7K 5C4JK 5C44C 3S2DK 5FJ8K 4YFNA 1SMYA 3CQZK 4A3EC 3M3YC 4A3GC 3S1QC 4BXXC 2JA8K 4Y52K 1I6HC 3S15K 4A3JK 4A93C 1SFOK 1I50C 4XLNA 4LK0A 4A3KC 4Y52C 4MEXA 2JA8C 2R7ZC 4X6AC 4G7HA 3S1NC 3RZDK 2JA6K 1I6HK 1WCMC 5IYDK 5IYCK 4OIQA 1XPPA 2JA6C 1TWFC 3S14C 4Y7NK 5TMCA 4C3HC 4XSZA 5M3MK 2R92K 4Y7NC 3HOWC 3I4MC 1TWCC 4NOIA 1HQMA 4A3DK 4QIWL 4A3GK 4BBSK 3DXJA 4A3MC 2R92C 3PO2K 3H0GK 4A3FC 3HOWK 3I4MK 4OINA 4A3JC 1BDFA 4JK1A 2R93C 3S2HK 2WB1D 4A3BK 2A6HA 4Q4ZA 4LLGA
chains in the Genus database with same CATH superfamily
3HKZL 4KMAA 4A3BC 2E2IA 5M5XK 4MEYA 3K7AC 1ZYRA 4A3EK 1TWAC 3HOUC 2Y0SD 4LJZA 3H3VL 2JA5C 3GTQC 3FOEA 5IP9C 4G7OA 3L4KA 3OREA 1R9TC 1XZQA 5JVOA 4XSXA 3RZOC 4A3IC 4C3HK 4GTFA 4KAWX 2Y0SL 3MMLB 2NVXK 1TWGK 5M5WK 4KM9A 3GIRA 2E2IK 3GTJC 4BY7C 4GFQA 4PAAA 1YNJA 5EGEA 3GTOC 3S17C 3PO3K 3HOYK 1BS2A 3RZOK 4BBRC 3M4OK 3TFHA 4XLPA 3LAJA 3GTPK 3S2HC 1J6XA 2ZJPS 3T02A 2L5NA 3CQZA 3HOXK 1GE9A 4A3CC 2B63K 1F9NA 1Y1WC 1INNA 4BY1C 5TMFA 1B4AA 3LYWA 3PIOS 4FM9A 2P5MA 3FKIC 4WJ3M 1XXAA 3GEHA 3LAPA 2WAQD 4KN4A 2E2JC 3A8IA 1XZQB 4A3CK 3H0GA 3S2DC 1PJ6A 4YFKA 2XCOA 1TWAA 4Q5SA 3S1RC 5EGHA 5JVGS 4YFXA 1IL2A 3GTQA 5DM7S 3T00A 2D6FC 3OPFA 1WCMK 3T01A 3QX3A 1XXBA 3GTMC 4KMDA 4BXXK 3S1QK 5M3FK 1SFOC 2R93K 1EH1A 3S0XA 2E2HA 1TWHA 3AQOA 1O27A 5FJ8K 1SMYA 3CQZK 4A3EC 4GTCA 2JA8K 1DCHA 4BLBA 1SFOK 1I50C 4X6AC 4LK0A 4FZBA 4PABA 1IBAA 3RZDK 4OIQA 1TWFC 5IOTA 1WIHA 5TMCA 4C3HC 5M3MK 2R92K 3I4MC 5DM6S 1TWCC 4XCHA 3DXJA 1USOA 1WQGA 5IORA 2GAHC 5CHPA 2WB1D 3GTKA 1B4BA 3GTOA 4QIWD 5E68A 4C3JC 2NVYK 1VGXA 4IO9S 1WOOA 5CJ9A 3N0BA 2KPUA 4MQ9A 2NVQC 5JFEA 3TFIA 2ZJRS 4AH6A 3AD8C 5IOSA 3GTQK 1WOSA 4LQYA 1XXCA 1Y1VK 1VJEA 3CF5S 1TWAK 3GTLK 2BE5A 4WFAS 1K83C 2Y3PA 1F93A 3N3YA 1IE0A 4A3IK 4BBSC 4J3NA 4IOCS 4C3IK 4P5BA 2YU9A 2CW0A 3GTJK 1G51A 1EK8A 2RH6A 1IW7A 3S16K 1ISEA 4U67S 3I4NC 3HOXC 2E2HK 4KC6A 2JA6A 1WCMA 4C2MC 3IPJA 3GTPC 3M3YK 3BP3A 2P8TA 4G0WA 4GZYA 3S15C 4KMHA 4KDDA 1L0WA 2L3UA 3I4NK 4WFBS 2NVTK 1TWHC 1ZXOA 4GTEA 1O2AA 1TWGC 1DCOA 1RU0A 4P9SA 1AB4A 1KQ4A 2PMZD 1IS1A 2PMZL 5IP7K 3GDZA 2CFAB 2KQ1A 2R7ZK 3H0GC 1UV7A 4A3LC 5M5YK 1I3QC 3GTGC 2VUMK 4WF9S 2PHCB 5C4JC 2JH3A 4GTDA 4GTAA 2PA8L 2YU9K 2A6EA 3HOZC 4A3KK 4KMUA 2JA7C 1F7UA 5IYCC 2ZUFA 5C44C 1USMA 4WJ4A 3S1QC 4BXXC 4G0VA 1I6HC 1TWGA 3BP8C 2JA6K 2JA8C 1PJ5A 5IYCK 4Y7NK 3S14C 1HI9A 3GTJA 4A3DK 1HQMA 4QIWL 3L4JA 1VLOA 4A3MC 2R92C 3PO2K 4A3FC 3I4MK 3SZZA 1EQRA 4JK1A 3S2HK 1PJ7A 1O26A 3FHZA 1DCPA 4Q4ZA 4LLGA 4KASA 3K7AK 1FEUA 4OIPA 3HOUK 3LPXA 2PA8D 3S1MC 2O5IA 2KWAA 3GTKC 2FQTA 1R9TK 4O2DA 5IYDC 5C3EC 3S1NK 2EBBA 4KM8A 3GSIA 4LOWA 3GTMA 2WB1L 1K83A 1XZPA 5HL7S 3Q3QA 3AQPA 2NVYC 1JOEA 3GTKK 4GTBA 3GTOK 3S17K 1TWFK 3VA7A 5C3EK 3HOYC 5IYBC 5FLMK 3BUEA 2V6TA 2GSOA 2ZUEA 5IP9K 4ZH4A 2O5JA 1SFOA 5C4XC 4GTLA 2E2HC 2YU9C 5FLMC 1O28A 1I6VA 2RGRA 2E2IC 4AYBL 4C45A 4LK1A 1YX2A 2NVYA 1WSVA 1BGWA 3S1RK 5C44K 3AH5A 2NVXA 2NVTC 2WAQL 3EQLA 3V4GA 4OIOA 1XZPB 3NUHA 3A8KA 1TWFA 3PO3C 1O24A 3GTLA 3M4OC 2JA7A 4KATA 4C3IC 2PPBA 4BKWA 3AD9C 4BLAA 4A93K 2R92A 5D4DA 2W7VA 3HOVK 3GEEA 2JA5K 2XCQA 2JA7K 2KXYA 4P5AA 2V6SA 5C4JK 5HQHA 3FOFA 3AD7C 4A3GC 2FQOA 3ADAC 4Y52K 4RMFA 2ZJQS 4A3JK 4A93C 4A3KC 4XLNA 2V6UA 1I6HK 4G7HA 3S1NC 5IYDK 3PIPS 3G4AA 1WOPA 1BJTA 4Y7NC 3HOWC 1WQHA 4BBSK 2R7ZA 3GTPA 4G0UA 1EFWA 4A3BK 2A6HA 4A3FK 4AYBD 1ZVUA 2CFAA 3CAGA 1O29A 4KB4A 5IYBK 3HOZK 4A3DC 1ZQ1C 2A69A 3H3VD 4C2MK 1C0AA 1V5VA 4BY7K 3HXAA 3HKZD 3WODA 3A8JA 4G7ZA 1TWCK 3S1MK 3N0CA 1IQ0A 3S14K 4A3LK 1K83K 1I3QK 3GTGK 1O25A 1J98A 1VRQC 5IOQA 5JVHS 3PO2C 2A68A 3FKIK 2XCRB 4C3JK 3TTGA 3S16C 3G4CA 4DDQA 2E2JK 1F7VA 1Y1WK 2VUMC 1Y1VA 4WFNS 1JQWA 1O2FB 3SZYA 4YG2A 3CQZC 2NVXC 1DD5A 3ERED 1YNNA 1I3QA 3GTGA 2B63A 4GT9A 3HOVC 4QJVA 3RZDC 1Y1VC 2VUMA 5C4XK 4BBRK 1VH2A 1TWHK 3GTLC 5L46A 1O2BA 4WILA 4IOAS 1X31C 3GTMK 5IP7C 2GSUA 2B63C 2GSNA 2ZFZA 2JA5A 4BY1K 1R9TA 1ZBSA 1EI6A 4A3MK 4OIRA 4KN7A 1WSRA 3TFJA 4WCES 4M1XA 1I50K 4X6AK 3GEIA 3JSTA 3OEPA 4QJVB 2NVQK 4KB2A 3S2DK 4YFNA 3M3YC 2R93A 5TJ3A 1TWCA 3S15K 4MEXA 2R7ZC 1J6VA 4Y52C 1J6WA 2GAGC 4LR2A 1WCMC 1XPPA 2JA6C 1WORA 1Y1WA 4XSZA 1I50A 1YCLA 1WQFA 4NOIA 4A3GK 3H0GK 3FKIA 3HOWK 4OINA 4A3JC 4ILDA 1BDFA 4KARA 2R93C 5HL8A 1JVIA 3DLLS
chains in the Genus database with same CATH topology
3HKZL 4AYBD 4A3BC 3K7AK 4OIPA 5M5XK 4MEYA 3K7AC 4QIWD 3HOUK 2PA8D 1ZYRA 5IYBK 3HOZK 4A3DC 4C3JC 4A3EK 1TWAC 2A69A 3H3VD 2O5IA 3S1MC 3HOUC 2Y0SD 4LJZA 2NVYK 4C2MK 3H3VL 3GTKC 4BY7K 1R9TK 4MQ9A 3HKZD 3WODA 2JA5C 2NVQC 3GTQC 5IP9C 5IYDC 5C3EC 4G7OA 3S1NK 1R9TC 4A3FK 4XSXA 3GTQK 3RZOC 4A3IC 2WB1L 4G7ZA 4C3HK 1Y1VK 2Y0SL 2NVXK 1TWCK 2NVYC 1TWAK 1TWGK 5M5WK 3S1MK 3GTLK 2E2IK 3GTJC 3GTKK 2BE5A 4BY7C 1K83C 3GTOK 3S17K 1TWFK 1YNJA 3S14K 5C3EK 4A3LK 3GTOC 3S17C 1I3QK 1K83K 3GTGK 3HOYK 3PO3K 3RZOK 4BBRC 4A3IK 3M4OK 4BBSC 4XLPA 3HOYC 3PO2C 2A68A 3FKIK 3GTPK 5IYBC 5FLMK 4C3JK 4C3IK 3S2HC 3S16C 2CW0A 3GTJK 2E2JK 3HOXK 1Y1WK 1IW7A 3S16K 2VUMC 4A3CC 2B63K 3I4NC 5IP9K 3HOXC 1Y1WC 4ZH4A 2O5JA 2E2HK 4BY1C 5C4XC 5TMFA 4YG2A 4C2MC 2E2HC 2YU9C 3FKIC 3GTPC 5FLMC 3CQZC 2NVXC 3M3YK 1I6VA 1YNNA 2WAQD 4KN4A 2E2IC 4AYBL 2E2JC 4GZYA 3S15C 3HOVC 4LK1A 4A3CK 4QJVA 3I4NK 2NVTK 3RZDC 1TWHC 3S1RK 3S2DC 1Y1VC 5C44K 5C4XK 4YFKA 4BBRK 2NVTC 2WAQL 1TWGC 3EQLA 3S1RC 4Q5SA 3GTLC 1TWHK 2PMZD 4OIOA 5IP7K 4YFXA 2PMZL 2R7ZK 3H0GC 3GTMK 5IP7C 4A3LC 5M5YK 1WCMK 1I3QC 3GTGC 3PO3C 2VUMK 2B63C 3GTMC 3M4OC 5C4JC 4BY1K 4C3IC 2PA8L 4A3MK 2PPBA 2YU9K 4OIRA 2A6EA 4KN7A 4BXXK 5M3FK 3HOZC 3S1QK 1SFOC 4A93K 2R93K 1I50K 4A3KK 4X6AK 4KMUA 5D4DA 2JA7C 4QJVB 3HOVK 5IYCC 2JA5K 2NVQK 2JA7K 5C4JK 5C44C 3S2DK 5FJ8K 4YFNA 1SMYA 3CQZK 4A3EC 3M3YC 4A3GC 3S1QC 4BXXC 2JA8K 4Y52K 1I6HC 3S15K 4A3JK 4A93C 1SFOK 1I50C 4XLNA 4LK0A 4A3KC 4Y52C 4MEXA 2JA8C 2R7ZC 4X6AC 4G7HA 3S1NC 3RZDK 2JA6K 1I6HK 1WCMC 5IYDK 5IYCK 4OIQA 1XPPA 2JA6C 1TWFC 3S14C 4Y7NK 5TMCA 4C3HC 4XSZA 5M3MK 2R92K 4Y7NC 3HOWC 3I4MC 1TWCC 4NOIA 1HQMA 4A3DK 4QIWL 4A3GK 4BBSK 3DXJA 4A3MC 2R92C 3PO2K 3H0GK 4A3FC 3HOWK 3I4MK 4OINA 4A3JC 1BDFA 4JK1A 2R93C 3S2HK 2WB1D 4A3BK 2A6HA 4Q4ZA 4LLGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HKZ L;  4AYB D;  4A3B C;  3K7A K;  4OIP A;  5M5X K;  4MEY A;  3K7A C;  4QIW D;  3HOU K;  2PA8 D;  1ZYR A;  5IYB K;  3HOZ K;  4A3D C;  4C3J C;  4A3E K;  1TWA C;  2A69 A;  3H3V D;  2O5I A;  3S1M C;  3HOU C;  2Y0S D;  4LJZ A;  2NVY K;  4C2M K;  3H3V L;  3GTK C;  4BY7 K;  1R9T K;  4MQ9 A;  3HKZ D;  3WOD A;  2JA5 C;  2NVQ C;  3GTQ C;  5IP9 C;  5IYD C;  5C3E C;  4G7O A;  3S1N K;  1R9T C;  4A3F K;  4XSX A;  3GTQ K;  3RZO C;  4A3I C;  2WB1 L;  4G7Z A;  4C3H K;  1Y1V K;  2Y0S L;  2NVX K;  1TWC K;  2NVY C;  1TWA K;  1TWG K;  5M5W K;  3S1M K;  3GTL K;  2E2I K;  3GTJ C;  3GTK K;  2BE5 A;  4BY7 C;  1K83 C;  3GTO K;  3S17 K;  1TWF K;  1YNJ A;  3S14 K;  5C3E K;  4A3L K;  3GTO C;  3S17 C;  1I3Q K;  1K83 K;  3GTG K;  3HOY K;  3PO3 K;  3RZO K;  4BBR C;  4A3I K;  3M4O K;  4BBS C;  4XLP A;  3HOY C;  3PO2 C;  2A68 A;  3FKI K;  3GTP K;  5IYB C;  5FLM K;  4C3J K;  4C3I K;  3S2H C;  3S16 C;  2CW0 A;  3GTJ K;  2E2J K;  3HOX K;  1Y1W K;  1IW7 A;  3S16 K;  2VUM C;  4A3C C;  2B63 K;  3I4N C;  5IP9 K;  3HOX C;  1Y1W C;  4ZH4 A;  2O5J A;  2E2H K;  4BY1 C;  5C4X C;  5TMF A;  4YG2 A;  4C2M C;  2E2H C;  2YU9 C;  3FKI C;  3GTP C;  5FLM C;  3CQZ C;  2NVX C;  3M3Y K;  1I6V A;  1YNN A;  2WAQ D;  4KN4 A;  2E2I C;  4AYB L;  2E2J C;  4GZY A;  3S15 C;  3HOV C;  4LK1 A;  4A3C K;  4QJV A;  3I4N K;  2NVT K;  3RZD C;  1TWH C;  3S1R K;  3S2D C;  1Y1V C;  5C44 K;  5C4X K;  4YFK A;  4BBR K;  2NVT C;  2WAQ L;  1TWG C;  3EQL A;  3S1R C;  4Q5S A;  3GTL C;  1TWH K;  2PMZ D;  4OIO A;  5IP7 K;  4YFX A;  2PMZ L;  2R7Z K;  3H0G C;  3GTM K;  5IP7 C;  4A3L C;  5M5Y K;  1WCM K;  1I3Q C;  3GTG C;  3PO3 C;  2VUM K;  2B63 C;  3GTM C;  3M4O C;  5C4J C;  4BY1 K;  4C3I C;  2PA8 L;  4A3M K;  2PPB A;  2YU9 K;  4OIR A;  2A6E A;  4KN7 A;  4BXX K;  5M3F K;  3HOZ C;  3S1Q K;  1SFO C;  4A93 K;  2R93 K;  1I50 K;  4A3K K;  4X6A K;  4KMU A;  5D4D A;  2JA7 C;  4QJV B;  3HOV K;  5IYC C;  2JA5 K;  2NVQ K;  2JA7 K;  5C4J K;  5C44 C;  3S2D K;  5FJ8 K;  4YFN A;  1SMY A;  3CQZ K;  4A3E C;  3M3Y C;  4A3G C;  3S1Q C;  4BXX C;  2JA8 K;  4Y52 K;  1I6H C;  3S15 K;  4A3J K;  4A93 C;  1SFO K;  1I50 C;  4XLN A;  4LK0 A;  4A3K C;  4Y52 C;  4MEX A;  2JA8 C;  2R7Z C;  4X6A C;  4G7H A;  3S1N C;  3RZD K;  2JA6 K;  1I6H K;  1WCM C;  5IYD K;  5IYC K;  4OIQ A;  1XPP A;  2JA6 C;  1TWF C;  3S14 C;  4Y7N K;  5TMC A;  4C3H C;  4XSZ A;  5M3M K;  2R92 K;  4Y7N C;  3HOW C;  3I4M C;  1TWC C;  4NOI A;  1HQM A;  4A3D K;  4QIW L;  4A3G K;  4BBS K;  3DXJ A;  4A3M C;  2R92 C;  3PO2 K;  3H0G K;  4A3F C;  3HOW K;  3I4M K;  4OIN A;  4A3J C;  1BDF A;  4JK1 A;  2R93 C;  3S2H K;  2WB1 D;  4A3B K;  2A6H A;  4Q4Z A;  4LLG A; 
#chains in the Genus database with same CATH topology
 3HKZ L;  4KMA A;  4A3B C;  2E2I A;  5M5X K;  4MEY A;  3K7A C;  1ZYR A;  4A3E K;  1TWA C;  3HOU C;  2Y0S D;  4LJZ A;  3H3V L;  2JA5 C;  3GTQ C;  3FOE A;  5IP9 C;  4G7O A;  3L4K A;  3ORE A;  1R9T C;  1XZQ A;  5JVO A;  4XSX A;  3RZO C;  4A3I C;  4C3H K;  4GTF A;  4KAW X;  2Y0S L;  3MML B;  2NVX K;  1TWG K;  5M5W K;  4KM9 A;  3GIR A;  2E2I K;  3GTJ C;  4BY7 C;  4GFQ A;  4PAA A;  1YNJ A;  5EGE A;  3GTO C;  3S17 C;  3PO3 K;  3HOY K;  1BS2 A;  3RZO K;  4BBR C;  3M4O K;  3TFH A;  4XLP A;  3LAJ A;  3GTP K;  3S2H C;  1J6X A;  2ZJP S;  3T02 A;  2L5N A;  3CQZ A;  3HOX K;  1GE9 A;  4A3C C;  2B63 K;  1F9N A;  1Y1W C;  1INN A;  4BY1 C;  5TMF A;  1B4A A;  3LYW A;  3PIO S;  4FM9 A;  2P5M A;  3FKI C;  4WJ3 M;  1XXA A;  3GEH A;  3LAP A;  2WAQ D;  4KN4 A;  2E2J C;  3A8I A;  1XZQ B;  4A3C K;  3H0G A;  3S2D C;  1PJ6 A;  4YFK A;  2XCO A;  1TWA A;  4Q5S A;  3S1R C;  5EGH A;  5JVG S;  4YFX A;  1IL2 A;  3GTQ A;  5DM7 S;  3T00 A;  2D6F C;  3OPF A;  1WCM K;  3T01 A;  3QX3 A;  1XXB A;  3GTM C;  4KMD A;  4BXX K;  3S1Q K;  5M3F K;  1SFO C;  2R93 K;  1EH1 A;  3S0X A;  2E2H A;  1TWH A;  3AQO A;  1O27 A;  5FJ8 K;  1SMY A;  3CQZ K;  4A3E C;  4GTC A;  2JA8 K;  1DCH A;  4BLB A;  1SFO K;  1I50 C;  4X6A C;  4LK0 A;  4FZB A;  4PAB A;  1IBA A;  3RZD K;  4OIQ A;  1TWF C;  5IOT A;  1WIH A;  5TMC A;  4C3H C;  5M3M K;  2R92 K;  3I4M C;  5DM6 S;  1TWC C;  4XCH A;  3DXJ A;  1USO A;  1WQG A;  5IOR A;  2GAH C;  5CHP A;  2WB1 D;  3GTK A;  1B4B A;  3GTO A;  4QIW D;  5E68 A;  4C3J C;  2NVY K;  1VGX A;  4IO9 S;  1WOO A;  5CJ9 A;  3N0B A;  2KPU A;  4MQ9 A;  2NVQ C;  5JFE A;  3TFI A;  2ZJR S;  4AH6 A;  3AD8 C;  5IOS A;  3GTQ K;  1WOS A;  4LQY A;  1XXC A;  1Y1V K;  1VJE A;  3CF5 S;  1TWA K;  3GTL K;  2BE5 A;  4WFA S;  1K83 C;  2Y3P A;  1F93 A;  3N3Y A;  1IE0 A;  4A3I K;  4BBS C;  4J3N A;  4IOC S;  4C3I K;  4P5B A;  2YU9 A;  2CW0 A;  3GTJ K;  1G51 A;  1EK8 A;  2RH6 A;  1IW7 A;  3S16 K;  1ISE A;  4U67 S;  3I4N C;  3HOX C;  2E2H K;  4KC6 A;  2JA6 A;  1WCM A;  4C2M C;  3IPJ A;  3GTP C;  3M3Y K;  3BP3 A;  2P8T A;  4G0W A;  4GZY A;  3S15 C;  4KMH A;  4KDD A;  1L0W A;  2L3U A;  3I4N K;  4WFB S;  2NVT K;  1TWH C;  1ZXO A;  4GTE A;  1O2A A;  1TWG C;  1DCO A;  1RU0 A;  4P9S A;  1AB4 A;  1KQ4 A;  2PMZ D;  1IS1 A;  2PMZ L;  5IP7 K;  3GDZ A;  2CFA B;  2KQ1 A;  2R7Z K;  3H0G C;  1UV7 A;  4A3L C;  5M5Y K;  1I3Q C;  3GTG C;  2VUM K;  4WF9 S;  2PHC B;  5C4J C;  2JH3 A;  4GTD A;  4GTA A;  2PA8 L;  2YU9 K;  2A6E A;  3HOZ C;  4A3K K;  4KMU A;  2JA7 C;  1F7U A;  5IYC C;  2ZUF A;  5C44 C;  1USM A;  4WJ4 A;  3S1Q C;  4BXX C;  4G0V A;  1I6H C;  1TWG A;  3BP8 C;  2JA6 K;  2JA8 C;  1PJ5 A;  5IYC K;  4Y7N K;  3S14 C;  1HI9 A;  3GTJ A;  4A3D K;  1HQM A;  4QIW L;  3L4J A;  1VLO A;  4A3M C;  2R92 C;  3PO2 K;  4A3F C;  3I4M K;  3SZZ A;  1EQR A;  4JK1 A;  3S2H K;  1PJ7 A;  1O26 A;  3FHZ A;  1DCP A;  4Q4Z A;  4LLG A;  4KAS A;  3K7A K;  1FEU A;  4OIP A;  3HOU K;  3LPX A;  2PA8 D;  3S1M C;  2O5I A;  2KWA A;  3GTK C;  2FQT A;  1R9T K;  4O2D A;  5IYD C;  5C3E C;  3S1N K;  2EBB A;  4KM8 A;  3GSI A;  4LOW A;  3GTM A;  2WB1 L;  1K83 A;  1XZP A;  5HL7 S;  3Q3Q A;  3AQP A;  2NVY C;  1JOE A;  3GTK K;  4GTB A;  3GTO K;  3S17 K;  1TWF K;  3VA7 A;  5C3E K;  3HOY C;  5IYB C;  5FLM K;  3BUE A;  2V6T A;  2GSO A;  2ZUE A;  5IP9 K;  4ZH4 A;  2O5J A;  1SFO A;  5C4X C;  4GTL A;  2E2H C;  2YU9 C;  5FLM C;  1O28 A;  1I6V A;  2RGR A;  2E2I C;  4AYB L;  4C45 A;  4LK1 A;  1YX2 A;  2NVY A;  1WSV A;  1BGW A;  3S1R K;  5C44 K;  3AH5 A;  2NVX A;  2NVT C;  2WAQ L;  3EQL A;  3V4G A;  4OIO A;  1XZP B;  3NUH A;  3A8K A;  1TWF A;  3PO3 C;  1O24 A;  3GTL A;  3M4O C;  2JA7 A;  4KAT A;  4C3I C;  2PPB A;  4BKW A;  3AD9 C;  4BLA A;  4A93 K;  2R92 A;  5D4D A;  2W7V A;  3HOV K;  3GEE A;  2JA5 K;  2XCQ A;  2JA7 K;  2KXY A;  4P5A A;  2V6S A;  5C4J K;  5HQH A;  3FOF A;  3AD7 C;  4A3G C;  2FQO A;  3ADA C;  4Y52 K;  4RMF A;  2ZJQ S;  4A3J K;  4A93 C;  4A3K C;  4XLN A;  2V6U A;  1I6H K;  4G7H A;  3S1N C;  5IYD K;  3PIP S;  3G4A A;  1WOP A;  1BJT A;  4Y7N C;  3HOW C;  1WQH A;  4BBS K;  2R7Z A;  3GTP A;  4G0U A;  1EFW A;  4A3B K;  2A6H A;  4A3F K;  4AYB D;  1ZVU A;  2CFA A;  3CAG A;  1O29 A;  4KB4 A;  5IYB K;  3HOZ K;  4A3D C;  1ZQ1 C;  2A69 A;  3H3V D;  4C2M K;  1C0A A;  1V5V A;  4BY7 K;  3HXA A;  3HKZ D;  3WOD A;  3A8J A;  4G7Z A;  1TWC K;  3S1M K;  3N0C A;  1IQ0 A;  3S14 K;  4A3L K;  1K83 K;  1I3Q K;  3GTG K;  1O25 A;  1J98 A;  1VRQ C;  5IOQ A;  5JVH S;  3PO2 C;  2A68 A;  3FKI K;  2XCR B;  4C3J K;  3TTG A;  3S16 C;  3G4C A;  4DDQ A;  2E2J K;  1F7V A;  1Y1W K;  2VUM C;  1Y1V A;  4WFN S;  1JQW A;  1O2F B;  3SZY A;  4YG2 A;  3CQZ C;  2NVX C;  1DD5 A;  3ERE D;  1YNN A;  1I3Q A;  3GTG A;  2B63 A;  4GT9 A;  3HOV C;  4QJV A;  3RZD C;  1Y1V C;  2VUM A;  5C4X K;  4BBR K;  1VH2 A;  1TWH K;  3GTL C;  5L46 A;  1O2B A;  4WIL A;  4IOA S;  1X31 C;  3GTM K;  5IP7 C;  2GSU A;  2B63 C;  2GSN A;  2ZFZ A;  2JA5 A;  4BY1 K;  1R9T A;  1ZBS A;  1EI6 A;  4A3M K;  4OIR A;  4KN7 A;  1WSR A;  3TFJ A;  4WCE S;  4M1X A;  1I50 K;  4X6A K;  3GEI A;  3JST A;  3OEP A;  4QJV B;  2NVQ K;  4KB2 A;  3S2D K;  4YFN A;  3M3Y C;  2R93 A;  5TJ3 A;  1TWC A;  3S15 K;  4MEX A;  2R7Z C;  1J6V A;  4Y52 C;  1J6W A;  2GAG C;  4LR2 A;  1WCM C;  1XPP A;  2JA6 C;  1WOR A;  1Y1W A;  4XSZ A;  1I50 A;  1YCL A;  1WQF A;  4NOI A;  4A3G K;  3H0G K;  3FKI A;  3HOW K;  4OIN A;  4A3J C;  4ILD A;  1BDF A;  4KAR A;  2R93 C;  5HL8 A;  1JVI A;  3DLL S; 
#chains in the Genus database with same CATH homology
 3HKZ L;  4AYB D;  4A3B C;  3K7A K;  4OIP A;  5M5X K;  4MEY A;  3K7A C;  4QIW D;  3HOU K;  2PA8 D;  1ZYR A;  5IYB K;  3HOZ K;  4A3D C;  4C3J C;  4A3E K;  1TWA C;  2A69 A;  3H3V D;  2O5I A;  3S1M C;  3HOU C;  2Y0S D;  4LJZ A;  2NVY K;  4C2M K;  3H3V L;  3GTK C;  4BY7 K;  1R9T K;  4MQ9 A;  3HKZ D;  3WOD A;  2JA5 C;  2NVQ C;  3GTQ C;  5IP9 C;  5IYD C;  5C3E C;  4G7O A;  3S1N K;  1R9T C;  4A3F K;  4XSX A;  3GTQ K;  3RZO C;  4A3I C;  2WB1 L;  4G7Z A;  4C3H K;  1Y1V K;  2Y0S L;  2NVX K;  1TWC K;  2NVY C;  1TWA K;  1TWG K;  5M5W K;  3S1M K;  3GTL K;  2E2I K;  3GTJ C;  3GTK K;  2BE5 A;  4BY7 C;  1K83 C;  3GTO K;  3S17 K;  1TWF K;  1YNJ A;  3S14 K;  5C3E K;  4A3L K;  3GTO C;  3S17 C;  1I3Q K;  1K83 K;  3GTG K;  3HOY K;  3PO3 K;  3RZO K;  4BBR C;  4A3I K;  3M4O K;  4BBS C;  4XLP A;  3HOY C;  3PO2 C;  2A68 A;  3FKI K;  3GTP K;  5IYB C;  5FLM K;  4C3J K;  4C3I K;  3S2H C;  3S16 C;  2CW0 A;  3GTJ K;  2E2J K;  3HOX K;  1Y1W K;  1IW7 A;  3S16 K;  2VUM C;  4A3C C;  2B63 K;  3I4N C;  5IP9 K;  3HOX C;  1Y1W C;  4ZH4 A;  2O5J A;  2E2H K;  4BY1 C;  5C4X C;  5TMF A;  4YG2 A;  4C2M C;  2E2H C;  2YU9 C;  3FKI C;  3GTP C;  5FLM C;  3CQZ C;  2NVX C;  3M3Y K;  1I6V A;  1YNN A;  2WAQ D;  4KN4 A;  2E2I C;  4AYB L;  2E2J C;  4GZY A;  3S15 C;  3HOV C;  4LK1 A;  4A3C K;  4QJV A;  3I4N K;  2NVT K;  3RZD C;  1TWH C;  3S1R K;  3S2D C;  1Y1V C;  5C44 K;  5C4X K;  4YFK A;  4BBR K;  2NVT C;  2WAQ L;  1TWG C;  3EQL A;  3S1R C;  4Q5S A;  3GTL C;  1TWH K;  2PMZ D;  4OIO A;  5IP7 K;  4YFX A;  2PMZ L;  2R7Z K;  3H0G C;  3GTM K;  5IP7 C;  4A3L C;  5M5Y K;  1WCM K;  1I3Q C;  3GTG C;  3PO3 C;  2VUM K;  2B63 C;  3GTM C;  3M4O C;  5C4J C;  4BY1 K;  4C3I C;  2PA8 L;  4A3M K;  2PPB A;  2YU9 K;  4OIR A;  2A6E A;  4KN7 A;  4BXX K;  5M3F K;  3HOZ C;  3S1Q K;  1SFO C;  4A93 K;  2R93 K;  1I50 K;  4A3K K;  4X6A K;  4KMU A;  5D4D A;  2JA7 C;  4QJV B;  3HOV K;  5IYC C;  2JA5 K;  2NVQ K;  2JA7 K;  5C4J K;  5C44 C;  3S2D K;  5FJ8 K;  4YFN A;  1SMY A;  3CQZ K;  4A3E C;  3M3Y C;  4A3G C;  3S1Q C;  4BXX C;  2JA8 K;  4Y52 K;  1I6H C;  3S15 K;  4A3J K;  4A93 C;  1SFO K;  1I50 C;  4XLN A;  4LK0 A;  4A3K C;  4Y52 C;  4MEX A;  2JA8 C;  2R7Z C;  4X6A C;  4G7H A;  3S1N C;  3RZD K;  2JA6 K;  1I6H K;  1WCM C;  5IYD K;  5IYC K;  4OIQ A;  1XPP A;  2JA6 C;  1TWF C;  3S14 C;  4Y7N K;  5TMC A;  4C3H C;  4XSZ A;  5M3M K;  2R92 K;  4Y7N C;  3HOW C;  3I4M C;  1TWC C;  4NOI A;  1HQM A;  4A3D K;  4QIW L;  4A3G K;  4BBS K;  3DXJ A;  4A3M C;  2R92 C;  3PO2 K;  3H0G K;  4A3F C;  3HOW K;  3I4M K;  4OIN A;  4A3J C;  1BDF A;  4JK1 A;  2R93 C;  3S2H K;  2WB1 D;  4A3B K;  2A6H A;  4Q4Z A;  4LLG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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