5C4XC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 44
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c4xC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c4xC01
2JA7K 3RZOK 4A3DK 4BBRC 3GTLK 5C3EC 2NVTK 4QIWD 1TWCK 1I50K 1YNJA 3HOUC 4YFXA 3GTGC 5C4XC 3H3VL 4OINA 4BBSC 1SMYA 3DXJA 3S14K 1I6VA 3S15K 3S1RC 3S2DC 5FJ8K 3S1NK 4A3GK 1HQMA 3PO2K 3WODA 5IP9K 2YU9C 1TWFK 1WCMC 4AYBL 1R9TC 4A3CK 1Y1VK 4Y7NC 2PPBA 2R92K 3H0GC 3K7AC 5IYDC 3M3YC 1TWAK 3HOXK 3GTKK 3I4NK 3GTPC 2Y0SL 3I4MK 2JA5K 4C3HC 3M4OC 4G7ZA 1SFOC 5IP7C 4A3BC 3GTOC 1TWGC 2A68A 2BE5A 4YFNA 2WB1L 5C44K 5IYCC 3CQZC 4C3JK 2O5JA 2B63C 4Y52K 4BXXC 4C3IC 4A93K 2PMZD 2JA6K 4X6AK 1I3QC 2WAQD 4A3IC 3GTJK 1YNNA 5IYBC 2VUMK 3GTMC 3HOZC 5M3MK 4QJVA 5D4DA 4OIOA 4BY7K 5C4JC 2R93C 4A3JC 1K83C 4JK1A 3PO3C 3S16C 3RZDK 4AYBD 1I6HC 1TWHK 2R7ZK 4XSXA 3GTQK 2NVQK 3S1QK 1BDFA 4A3KK 2PA8D 1Y1WC 3S2HC 3HKZL 4BBRK 4C2MK 4LLGA 5C4XK 3HOUK 3GTGK 2NVYK 2Y0SD 4BBSK 4ZH4A 3S1NC 3S1RK 2WB1D 4Q4ZA 3EQLA 4MEXA 4OIQA 2JA8C 2YU9K 1R9TK 4BY1C 4A3FC 1TWAC 2E2IC 3H0GK 3K7AK 3HOXC 3GTKC 4QIWL 3M3YK 4G7HA 3I4MC 2JA5C 3GTPK 3S17C 3H3VD 3HOVC 3S1MC 4G7OA 3M4OK 1SFOK 4KN7A 3FKIC 2E2JC 3HOYC 4A3LC 5IP7K 3GTOK 4A3BK 1TWGK 4Y52C 3CQZK 5FLMK 2B63K 4XLPA 3HOWC 4A93C 4A3EC 2JA6C 1IW7A 4X6AC 4C3IK 5M5WK 2NVXK 4MEYA 2A69A 2JA7C 1I3QK 3RZOC 4A3DC 5TMCA 3GTLC 2NVTC 4MQ9A 1TWCC 2VUMC 1I50C 5C3EK 3S15C 5IYBK 3S14C 3S2DK 2A6HA 5C4JK 4A3GC 3PO2C 4A3JK 2R93K 4OIPA 4XSZA 1TWHC 5IP9C 2CW0A 1TWFC 4NOIA 4A3CC 1K83K 5M3FK 2PMZL 3PO3K 4GZYA 1WCMK 1Y1VC 2WAQL 4A3KC 4C2MC 4KMUA 2R92C 4LK0A 4Y7NK 1Y1WK 3S2HK 5IYDK 2NVYC 2A6EA 4OIRA 3I4NC 2E2HK 4XLNA 5TMFA 5M5XK 4C3HK 5M5YK 4A3MC 5C44C 2E2HC 2O5IA 1XPPA 4C3JC 2JA8K 5IYCK 4BXXK 4BY1K 4YG2A 2PA8L 4A3FK 2E2IK 1ZYRA 4LK1A 3HKZD 3GTJC 3S17K 4A3IK 4YFKA 3HOVK 3S1MK 3GTMK 3FKIK 2E2JK 3HOYK 3HOZK 4A3LK 4BY7C 4QJVB 5FLMC 4KN4A 4LJZA 2NVXC 2R7ZC 3RZDC 4Q5SA 4A3MK 3HOWK 4A3EK 3S16K 3GTQC 2NVQC 1I6HK 3S1QC
chains in the Genus database with same CATH superfamily
3T02A 3RZOK 4GFQA 2P5MA 2NVTK 4LQYA 1EFWA 3GTLK 5C4XC 1TWAA 2KPUA 4GTEA 1USOA 3S1RC 3S2DC 3GTMA 3FKIA 3CF5S 1R9TC 1Y1VK 4Y7NC 2FQTA 4WF9S 3DLLS 3HXAA 1ZQ1C 4C45A 2ZJQS 1WSVA 3GEHA 4PABA 3GTKK 4P5AA 4KMHA 1L0WA 2JA5K 3GTLA 1RU0A 1VH2A 4KASA 3GTOC 5IOTA 5IYCC 4C3JK 4BXXC 3NUHA 4KM9A 1WQGA 3LAPA 2ZUFA 2JA6K 1O25A 4A3IC 1Y1VA 5HQHA 4OIOA 3AD8C 1EI6A 2JA5A 1K83C 3PO3C 3S16C 3GTQK 1VLOA 3OPFA 1BDFA 1Y1WC 3HKZL 3GSIA 3HOUK 2Y0SD 4BBSK 1O29A 1TWAC 3N0BA 3GTQA 1WORA 3GTPK 3ADAC 4KN7A 3FKIC 4A3LC 3SZYA 5IP7K 1TWGK 4Y52C 2B63K 4XLPA 5DM6S 4A3EC 1IW7A 5M5WK 2RGRA 4MEYA 2A69A 1I3QK 3RZOC 2XCRB 3GTLC 2NVTC 4MQ9A 4KDDA 1O24A 3S2DK 3GTPA 1J98A 1TWHC 1XXCA 1TWGA 1Y1VC 2GAHC 4C2MC 3V4GA 3L4JA 4Y7NK 2B63A 3G4AA 4OIRA 1I3QA 5JVOA 4LOWA 1KQ4A 1XPPA 4C3JC 2V6UA 2JA8K 2ZUEA 5IYCK 4M1XA 5DM7S 3PIPS 4BXXK 4YG2A 1VRQC 4GTAA 4FM9A 4A3FK 2E2IK 3IPJA 4IOCS 4A3IK 1B4BA 4RMFA 2GSOA 2E2JK 3HOYK 2GAGC 5IOSA 3FOFA 2NVXC 2ZJPS 3S16K 3GTQC 1XXAA 3AD7C 1DCHA 1WOOA 2JA7K 1TWCK 1G51A 1YNJA 3HOUC 4YFXA 1F93A 1I50K 2E2IA 4IO9S 4OINA 1SMYA 3DXJA 4BBSC 1I6VA 1ZBSA 4A3GK 1B4AA 4FZBA 1TWFK 4AYBL 2R92K 5IYDC 1TWAK 5JVHS 2XCOA 1WOSA 3I4NK 3GTPC 5JVGS 2JA7A 5IP7C 1TWCA 1I50A 3LPXA 1TWGC 1INNA 2E2HK 4PAAA 2KXYA 2O5JA 2B63C 4Y52K 4WFBS 1O26A 1I3QC 2WAQD 1V5VA 1TWFA 4KB2A 2R92A 3GTJK 5D4DA 4G0UA 1TWHK 4XSXA 2E2HA 1JOEA 2PA8D 4BBRK 1O2BA 4C2MK 1XZQB 3S1NC 3GTJA 2WB1D 4Q4ZA 2JA8C 2YU9K 1X31C 4A3FC 2E2IC 3K7AK 2V6SA 3M3YK 1TWHA 3H3VD 1SFOK 2E2JC 3HOYC 3PIOS 3A8JA 2EBBA 3AQOA 4A93C 4C3IK 2NVXK 3QX3A 2JA7C 2YU9A 2GSNA 4GT9A 1TWCC 2VUMC 1I50C 4J3NA 5IYBK 4KMAA 5C4JK 4A3GC 2R93K 4A3JK 1SFOA 1TWFC 4GTCA 5HL7S 4DDQA 5EGHA 2WAQL 4A3KC 2R92C 3S0XA 4LK0A 1YCLA 2NVXA 5IYDK 1XZQA 2NVYC 2A6EA 3I4NC 5TMFA 4IOAS 5M5YK 2E2HC 3Q3QA 2O5IA 1PJ7A 3BP3A 3N0CA 3OREA 4KB4A 5EGEA 2R93A 4BY1K 4WJ3M 2PA8L 3GIRA 1WIHA 2W7VA 4LK1A 1IE0A 3GTJC 4LR2A 3S17K 4YFKA 3HOVK 4G0WA 4KN4A 1VGXA 4Q5SA 3HOWK 3OEPA 4KMDA 4A3DK 4BBRC 1C0AA 5C3EC 5HL8A 4GTLA 3TFIA 3H3VL 3G4CA 3LYWA 1XXBA 1IQ0A 5FJ8K 3S1NK 1YX2A 1WQFA 1UV7A 3WODA 5IP9K 2YU9C 4XCHA 4A3CK 4KM8A 3ERED 1BJTA 3K7AC 1IL2A 3M3YC 1WQHA 2RH6A 3AD9C 2L3UA 3L4KA 2Y0SL 1F9NA 4C3HC 1SFOC 3GEEA 5C44K 4C3IC 2GSUA 4A93K 2PMZD 1BS2A 1YNNA 5IYBC 2VUMK 3TFHA 3HOZC 1IBAA 5C4JC 2R93C 4P9SA 4A3JC 4JK1A 2R7ZK 3RZDK 4WJ4A 2NVQK 4BKWA 4A3KK 3GTGK 2NVYK 4ZH4A 4WILA 3BUEA 2VUMA 3EQLA 4MEXA 4BY1C 3LAJA 3H0GK 3HOXC 2R7ZA 3I4MC 1XZPA 3S17C 4G7OA 3HOVC 3M4OK 4A3BK 2FQOA 4KATA 2NVYA 3GTGA 3CQZK 5L46A 3FOEA 3HOWC 2JH3A 3T01A 4X6AC 4A3DC 1O27A 3T00A 5C3EK 3H0GA 2A6HA 4OIPA 4XSZA 5IP9C 2ZJRS 2CW0A 4A3CC 1JVIA 3GDZA 2PMZL 2CFAB 3CQZA 3S2HK 3FHZA 4XLNA 4KAWX 1J6XA 3SZZA 1EQRA 1DD5A 4GTFA 3TFJA 4C3HK 5C44C 1O2AA 1ZYRA 3AH5A 4KC6A 3BP8C 1PJ5A 3S1MK 3HOZK 2KWAA 4QJVB 5FLMC 4LJZA 2R7ZC 3RZDC 5CJ9A 1EK8A 2NVQC 4BLBA 4WFAS 4QIWD 3GTGC 3S15K 1BGWA 5JFEA 3S14K 3GTKA 5E68A 1HQMA 4KARA 3PO2K 2CFAA 1F7VA 1WCMC 2PPBA 1O2FB 3H0GC 4GTDA 2JA6A 3HOXK 1FEUA 3I4MK 3M4OC 4G7ZA 4A3BC 1WOPA 2A68A 2BE5A 4YFNA 2WB1L 4ILDA 3CQZC 4A3MK 4X6AK 3CAGA 4WCES 1AB4A 2ZFZA 3GTMC 5M3MK 4QJVA 1WSRA 4BY7K 1DCOA 1J6VA 2KQ1A 1ZXOA 4AH6A 4AYBD 1I6HC 3S1QK 3VA7A 3S2HC 4LLGA 1JQWA 1EH1A 5C4XK 3MMLB 4O2DA 3S1RK 4P5BA 1XZPB 5IORA 3JSTA 4OIQA 2Y3PA 3A8KA 1R9TK 3N3YA 1J6WA 4GTBA 1DCPA 3GTKC 4QIWL 4G7HA 2JA5C 5TJ3A 3S1MC 2P8TA 2XCQA 3GEIA 3GTOK 1VJEA 1F7UA 5FLMK 2JA6C 2PHCB 5TMCA 1R9TA 2L5NA 1IS1A 1ZVUA 4U67S 3S15C 3S14C 5IOQA 1HI9A 3PO2C 5M3FK 1K83K 3PO3K 4NOIA 3GTOA 4GZYA 1WCMK 4KMUA 3TTGA 1Y1WK 1USMA 5M5XK 1ISEA 4WFNS 1GE9A 2V6TA 4G0VA 4A3MC 1O28A 3A8IA 3AQPA 1K83A 4BLAA 1WCMA 3HKZD 5CHPA 1Y1WA 1PJ6A 3GTMK 3FKIK 4A3LK 4BY7C 2D6FC 4A3EK 1I6HK 3S1QC
chains in the Genus database with same CATH topology
2JA7K 3RZOK 4A3DK 4BBRC 3GTLK 5C3EC 2NVTK 4QIWD 1TWCK 1I50K 1YNJA 3HOUC 4YFXA 3GTGC 5C4XC 3H3VL 4OINA 4BBSC 1SMYA 3DXJA 3S14K 1I6VA 3S15K 3S1RC 3S2DC 5FJ8K 3S1NK 4A3GK 1HQMA 3PO2K 3WODA 5IP9K 2YU9C 1TWFK 1WCMC 4AYBL 1R9TC 4A3CK 1Y1VK 4Y7NC 2PPBA 2R92K 3H0GC 3K7AC 5IYDC 3M3YC 1TWAK 3HOXK 3GTKK 3I4NK 3GTPC 2Y0SL 3I4MK 2JA5K 4C3HC 3M4OC 4G7ZA 1SFOC 5IP7C 4A3BC 3GTOC 1TWGC 2A68A 2BE5A 4YFNA 2WB1L 5C44K 5IYCC 3CQZC 4C3JK 2O5JA 2B63C 4Y52K 4BXXC 4C3IC 4A93K 2PMZD 2JA6K 4X6AK 1I3QC 2WAQD 4A3IC 3GTJK 1YNNA 5IYBC 2VUMK 3GTMC 3HOZC 5M3MK 4QJVA 5D4DA 4OIOA 4BY7K 5C4JC 2R93C 4A3JC 1K83C 4JK1A 3PO3C 3S16C 3RZDK 4AYBD 1I6HC 1TWHK 2R7ZK 4XSXA 3GTQK 2NVQK 3S1QK 1BDFA 4A3KK 2PA8D 1Y1WC 3S2HC 3HKZL 4BBRK 4C2MK 4LLGA 5C4XK 3HOUK 3GTGK 2NVYK 2Y0SD 4BBSK 4ZH4A 3S1NC 3S1RK 2WB1D 4Q4ZA 3EQLA 4MEXA 4OIQA 2JA8C 2YU9K 1R9TK 4BY1C 4A3FC 1TWAC 2E2IC 3H0GK 3K7AK 3HOXC 3GTKC 4QIWL 3M3YK 4G7HA 3I4MC 2JA5C 3GTPK 3S17C 3H3VD 3HOVC 3S1MC 4G7OA 3M4OK 1SFOK 4KN7A 3FKIC 2E2JC 3HOYC 4A3LC 5IP7K 3GTOK 4A3BK 1TWGK 4Y52C 3CQZK 5FLMK 2B63K 4XLPA 3HOWC 4A93C 4A3EC 2JA6C 1IW7A 4X6AC 4C3IK 5M5WK 2NVXK 4MEYA 2A69A 2JA7C 1I3QK 3RZOC 4A3DC 5TMCA 3GTLC 2NVTC 4MQ9A 1TWCC 2VUMC 1I50C 5C3EK 3S15C 5IYBK 3S14C 3S2DK 2A6HA 5C4JK 4A3GC 3PO2C 4A3JK 2R93K 4OIPA 4XSZA 1TWHC 5IP9C 2CW0A 1TWFC 4NOIA 4A3CC 1K83K 5M3FK 2PMZL 3PO3K 4GZYA 1WCMK 1Y1VC 2WAQL 4A3KC 4C2MC 4KMUA 2R92C 4LK0A 4Y7NK 1Y1WK 3S2HK 5IYDK 2NVYC 2A6EA 4OIRA 3I4NC 2E2HK 4XLNA 5TMFA 5M5XK 4C3HK 5M5YK 4A3MC 5C44C 2E2HC 2O5IA 1XPPA 4C3JC 2JA8K 5IYCK 4BXXK 4BY1K 4YG2A 2PA8L 4A3FK 2E2IK 1ZYRA 4LK1A 3HKZD 3GTJC 3S17K 4A3IK 4YFKA 3HOVK 3S1MK 3GTMK 3FKIK 2E2JK 3HOYK 3HOZK 4A3LK 4BY7C 4QJVB 5FLMC 4KN4A 4LJZA 2NVXC 2R7ZC 3RZDC 4Q5SA 4A3MK 3HOWK 4A3EK 3S16K 3GTQC 2NVQC 1I6HK 3S1QC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JA7 K;  3RZO K;  4A3D K;  4BBR C;  3GTL K;  5C3E C;  2NVT K;  4QIW D;  1TWC K;  1I50 K;  1YNJ A;  3HOU C;  4YFX A;  3GTG C;  5C4X C;  3H3V L;  4OIN A;  4BBS C;  1SMY A;  3DXJ A;  3S14 K;  1I6V A;  3S15 K;  3S1R C;  3S2D C;  5FJ8 K;  3S1N K;  4A3G K;  1HQM A;  3PO2 K;  3WOD A;  5IP9 K;  2YU9 C;  1TWF K;  1WCM C;  4AYB L;  1R9T C;  4A3C K;  1Y1V K;  4Y7N C;  2PPB A;  2R92 K;  3H0G C;  3K7A C;  5IYD C;  3M3Y C;  1TWA K;  3HOX K;  3GTK K;  3I4N K;  3GTP C;  2Y0S L;  3I4M K;  2JA5 K;  4C3H C;  3M4O C;  4G7Z A;  1SFO C;  5IP7 C;  4A3B C;  3GTO C;  1TWG C;  2A68 A;  2BE5 A;  4YFN A;  2WB1 L;  5C44 K;  5IYC C;  3CQZ C;  4C3J K;  2O5J A;  2B63 C;  4Y52 K;  4BXX C;  4C3I C;  4A93 K;  2PMZ D;  2JA6 K;  4X6A K;  1I3Q C;  2WAQ D;  4A3I C;  3GTJ K;  1YNN A;  5IYB C;  2VUM K;  3GTM C;  3HOZ C;  5M3M K;  4QJV A;  5D4D A;  4OIO A;  4BY7 K;  5C4J C;  2R93 C;  4A3J C;  1K83 C;  4JK1 A;  3PO3 C;  3S16 C;  3RZD K;  4AYB D;  1I6H C;  1TWH K;  2R7Z K;  4XSX A;  3GTQ K;  2NVQ K;  3S1Q K;  1BDF A;  4A3K K;  2PA8 D;  1Y1W C;  3S2H C;  3HKZ L;  4BBR K;  4C2M K;  4LLG A;  5C4X K;  3HOU K;  3GTG K;  2NVY K;  2Y0S D;  4BBS K;  4ZH4 A;  3S1N C;  3S1R K;  2WB1 D;  4Q4Z A;  3EQL A;  4MEX A;  4OIQ A;  2JA8 C;  2YU9 K;  1R9T K;  4BY1 C;  4A3F C;  1TWA C;  2E2I C;  3H0G K;  3K7A K;  3HOX C;  3GTK C;  4QIW L;  3M3Y K;  4G7H A;  3I4M C;  2JA5 C;  3GTP K;  3S17 C;  3H3V D;  3HOV C;  3S1M C;  4G7O A;  3M4O K;  1SFO K;  4KN7 A;  3FKI C;  2E2J C;  3HOY C;  4A3L C;  5IP7 K;  3GTO K;  4A3B K;  1TWG K;  4Y52 C;  3CQZ K;  5FLM K;  2B63 K;  4XLP A;  3HOW C;  4A93 C;  4A3E C;  2JA6 C;  1IW7 A;  4X6A C;  4C3I K;  5M5W K;  2NVX K;  4MEY A;  2A69 A;  2JA7 C;  1I3Q K;  3RZO C;  4A3D C;  5TMC A;  3GTL C;  2NVT C;  4MQ9 A;  1TWC C;  2VUM C;  1I50 C;  5C3E K;  3S15 C;  5IYB K;  3S14 C;  3S2D K;  2A6H A;  5C4J K;  4A3G C;  3PO2 C;  4A3J K;  2R93 K;  4OIP A;  4XSZ A;  1TWH C;  5IP9 C;  2CW0 A;  1TWF C;  4NOI A;  4A3C C;  1K83 K;  5M3F K;  2PMZ L;  3PO3 K;  4GZY A;  1WCM K;  1Y1V C;  2WAQ L;  4A3K C;  4C2M C;  4KMU A;  2R92 C;  4LK0 A;  4Y7N K;  1Y1W K;  3S2H K;  5IYD K;  2NVY C;  2A6E A;  4OIR A;  3I4N C;  2E2H K;  4XLN A;  5TMF A;  5M5X K;  4C3H K;  5M5Y K;  4A3M C;  5C44 C;  2E2H C;  2O5I A;  1XPP A;  4C3J C;  2JA8 K;  5IYC K;  4BXX K;  4BY1 K;  4YG2 A;  2PA8 L;  4A3F K;  2E2I K;  1ZYR A;  4LK1 A;  3HKZ D;  3GTJ C;  3S17 K;  4A3I K;  4YFK A;  3HOV K;  3S1M K;  3GTM K;  3FKI K;  2E2J K;  3HOY K;  3HOZ K;  4A3L K;  4BY7 C;  4QJV B;  5FLM C;  4KN4 A;  4LJZ A;  2NVX C;  2R7Z C;  3RZD C;  4Q5S A;  4A3M K;  3HOW K;  4A3E K;  3S16 K;  3GTQ C;  2NVQ C;  1I6H K;  3S1Q C; 
#chains in the Genus database with same CATH topology
 3T02 A;  3RZO K;  4GFQ A;  2P5M A;  2NVT K;  4LQY A;  1EFW A;  3GTL K;  5C4X C;  1TWA A;  2KPU A;  4GTE A;  1USO A;  3S1R C;  3S2D C;  3GTM A;  3FKI A;  3CF5 S;  1R9T C;  1Y1V K;  4Y7N C;  2FQT A;  4WF9 S;  3DLL S;  3HXA A;  1ZQ1 C;  4C45 A;  2ZJQ S;  1WSV A;  3GEH A;  4PAB A;  3GTK K;  4P5A A;  4KMH A;  1L0W A;  2JA5 K;  3GTL A;  1RU0 A;  1VH2 A;  4KAS A;  3GTO C;  5IOT A;  5IYC C;  4C3J K;  4BXX C;  3NUH A;  4KM9 A;  1WQG A;  3LAP A;  2ZUF A;  2JA6 K;  1O25 A;  4A3I C;  1Y1V A;  5HQH A;  4OIO A;  3AD8 C;  1EI6 A;  2JA5 A;  1K83 C;  3PO3 C;  3S16 C;  3GTQ K;  1VLO A;  3OPF A;  1BDF A;  1Y1W C;  3HKZ L;  3GSI A;  3HOU K;  2Y0S D;  4BBS K;  1O29 A;  1TWA C;  3N0B A;  3GTQ A;  1WOR A;  3GTP K;  3ADA C;  4KN7 A;  3FKI C;  4A3L C;  3SZY A;  5IP7 K;  1TWG K;  4Y52 C;  2B63 K;  4XLP A;  5DM6 S;  4A3E C;  1IW7 A;  5M5W K;  2RGR A;  4MEY A;  2A69 A;  1I3Q K;  3RZO C;  2XCR B;  3GTL C;  2NVT C;  4MQ9 A;  4KDD A;  1O24 A;  3S2D K;  3GTP A;  1J98 A;  1TWH C;  1XXC A;  1TWG A;  1Y1V C;  2GAH C;  4C2M C;  3V4G A;  3L4J A;  4Y7N K;  2B63 A;  3G4A A;  4OIR A;  1I3Q A;  5JVO A;  4LOW A;  1KQ4 A;  1XPP A;  4C3J C;  2V6U A;  2JA8 K;  2ZUE A;  5IYC K;  4M1X A;  5DM7 S;  3PIP S;  4BXX K;  4YG2 A;  1VRQ C;  4GTA A;  4FM9 A;  4A3F K;  2E2I K;  3IPJ A;  4IOC S;  4A3I K;  1B4B A;  4RMF A;  2GSO A;  2E2J K;  3HOY K;  2GAG C;  5IOS A;  3FOF A;  2NVX C;  2ZJP S;  3S16 K;  3GTQ C;  1XXA A;  3AD7 C;  1DCH A;  1WOO A;  2JA7 K;  1TWC K;  1G51 A;  1YNJ A;  3HOU C;  4YFX A;  1F93 A;  1I50 K;  2E2I A;  4IO9 S;  4OIN A;  1SMY A;  3DXJ A;  4BBS C;  1I6V A;  1ZBS A;  4A3G K;  1B4A A;  4FZB A;  1TWF K;  4AYB L;  2R92 K;  5IYD C;  1TWA K;  5JVH S;  2XCO A;  1WOS A;  3I4N K;  3GTP C;  5JVG S;  2JA7 A;  5IP7 C;  1TWC A;  1I50 A;  3LPX A;  1TWG C;  1INN A;  2E2H K;  4PAA A;  2KXY A;  2O5J A;  2B63 C;  4Y52 K;  4WFB S;  1O26 A;  1I3Q C;  2WAQ D;  1V5V A;  1TWF A;  4KB2 A;  2R92 A;  3GTJ K;  5D4D A;  4G0U A;  1TWH K;  4XSX A;  2E2H A;  1JOE A;  2PA8 D;  4BBR K;  1O2B A;  4C2M K;  1XZQ B;  3S1N C;  3GTJ A;  2WB1 D;  4Q4Z A;  2JA8 C;  2YU9 K;  1X31 C;  4A3F C;  2E2I C;  3K7A K;  2V6S A;  3M3Y K;  1TWH A;  3H3V D;  1SFO K;  2E2J C;  3HOY C;  3PIO S;  3A8J A;  2EBB A;  3AQO A;  4A93 C;  4C3I K;  2NVX K;  3QX3 A;  2JA7 C;  2YU9 A;  2GSN A;  4GT9 A;  1TWC C;  2VUM C;  1I50 C;  4J3N A;  5IYB K;  4KMA A;  5C4J K;  4A3G C;  2R93 K;  4A3J K;  1SFO A;  1TWF C;  4GTC A;  5HL7 S;  4DDQ A;  5EGH A;  2WAQ L;  4A3K C;  2R92 C;  3S0X A;  4LK0 A;  1YCL A;  2NVX A;  5IYD K;  1XZQ A;  2NVY C;  2A6E A;  3I4N C;  5TMF A;  4IOA S;  5M5Y K;  2E2H C;  3Q3Q A;  2O5I A;  1PJ7 A;  3BP3 A;  3N0C A;  3ORE A;  4KB4 A;  5EGE A;  2R93 A;  4BY1 K;  4WJ3 M;  2PA8 L;  3GIR A;  1WIH A;  2W7V A;  4LK1 A;  1IE0 A;  3GTJ C;  4LR2 A;  3S17 K;  4YFK A;  3HOV K;  4G0W A;  4KN4 A;  1VGX A;  4Q5S A;  3HOW K;  3OEP A;  4KMD A;  4A3D K;  4BBR C;  1C0A A;  5C3E C;  5HL8 A;  4GTL A;  3TFI A;  3H3V L;  3G4C A;  3LYW A;  1XXB A;  1IQ0 A;  5FJ8 K;  3S1N K;  1YX2 A;  1WQF A;  1UV7 A;  3WOD A;  5IP9 K;  2YU9 C;  4XCH A;  4A3C K;  4KM8 A;  3ERE D;  1BJT A;  3K7A C;  1IL2 A;  3M3Y C;  1WQH A;  2RH6 A;  3AD9 C;  2L3U A;  3L4K A;  2Y0S L;  1F9N A;  4C3H C;  1SFO C;  3GEE A;  5C44 K;  4C3I C;  2GSU A;  4A93 K;  2PMZ D;  1BS2 A;  1YNN A;  5IYB C;  2VUM K;  3TFH A;  3HOZ C;  1IBA A;  5C4J C;  2R93 C;  4P9S A;  4A3J C;  4JK1 A;  2R7Z K;  3RZD K;  4WJ4 A;  2NVQ K;  4BKW A;  4A3K K;  3GTG K;  2NVY K;  4ZH4 A;  4WIL A;  3BUE A;  2VUM A;  3EQL A;  4MEX A;  4BY1 C;  3LAJ A;  3H0G K;  3HOX C;  2R7Z A;  3I4M C;  1XZP A;  3S17 C;  4G7O A;  3HOV C;  3M4O K;  4A3B K;  2FQO A;  4KAT A;  2NVY A;  3GTG A;  3CQZ K;  5L46 A;  3FOE A;  3HOW C;  2JH3 A;  3T01 A;  4X6A C;  4A3D C;  1O27 A;  3T00 A;  5C3E K;  3H0G A;  2A6H A;  4OIP A;  4XSZ A;  5IP9 C;  2ZJR S;  2CW0 A;  4A3C C;  1JVI A;  3GDZ A;  2PMZ L;  2CFA B;  3CQZ A;  3S2H K;  3FHZ A;  4XLN A;  4KAW X;  1J6X A;  3SZZ A;  1EQR A;  1DD5 A;  4GTF A;  3TFJ A;  4C3H K;  5C44 C;  1O2A A;  1ZYR A;  3AH5 A;  4KC6 A;  3BP8 C;  1PJ5 A;  3S1M K;  3HOZ K;  2KWA A;  4QJV B;  5FLM C;  4LJZ A;  2R7Z C;  3RZD C;  5CJ9 A;  1EK8 A;  2NVQ C;  4BLB A;  4WFA S;  4QIW D;  3GTG C;  3S15 K;  1BGW A;  5JFE A;  3S14 K;  3GTK A;  5E68 A;  1HQM A;  4KAR A;  3PO2 K;  2CFA A;  1F7V A;  1WCM C;  2PPB A;  1O2F B;  3H0G C;  4GTD A;  2JA6 A;  3HOX K;  1FEU A;  3I4M K;  3M4O C;  4G7Z A;  4A3B C;  1WOP A;  2A68 A;  2BE5 A;  4YFN A;  2WB1 L;  4ILD A;  3CQZ C;  4A3M K;  4X6A K;  3CAG A;  4WCE S;  1AB4 A;  2ZFZ A;  3GTM C;  5M3M K;  4QJV A;  1WSR A;  4BY7 K;  1DCO A;  1J6V A;  2KQ1 A;  1ZXO A;  4AH6 A;  4AYB D;  1I6H C;  3S1Q K;  3VA7 A;  3S2H C;  4LLG A;  1JQW A;  1EH1 A;  5C4X K;  3MML B;  4O2D A;  3S1R K;  4P5B A;  1XZP B;  5IOR A;  3JST A;  4OIQ A;  2Y3P A;  3A8K A;  1R9T K;  3N3Y A;  1J6W A;  4GTB A;  1DCP A;  3GTK C;  4QIW L;  4G7H A;  2JA5 C;  5TJ3 A;  3S1M C;  2P8T A;  2XCQ A;  3GEI A;  3GTO K;  1VJE A;  1F7U A;  5FLM K;  2JA6 C;  2PHC B;  5TMC A;  1R9T A;  2L5N A;  1IS1 A;  1ZVU A;  4U67 S;  3S15 C;  3S14 C;  5IOQ A;  1HI9 A;  3PO2 C;  5M3F K;  1K83 K;  3PO3 K;  4NOI A;  3GTO A;  4GZY A;  1WCM K;  4KMU A;  3TTG A;  1Y1W K;  1USM A;  5M5X K;  1ISE A;  4WFN S;  1GE9 A;  2V6T A;  4G0V A;  4A3M C;  1O28 A;  3A8I A;  3AQP A;  1K83 A;  4BLA A;  1WCM A;  3HKZ D;  5CHP A;  1Y1W A;  1PJ6 A;  3GTM K;  3FKI K;  4A3L K;  4BY7 C;  2D6F C;  4A3E K;  1I6H K;  3S1Q C; 
#chains in the Genus database with same CATH homology
 2JA7 K;  3RZO K;  4A3D K;  4BBR C;  3GTL K;  5C3E C;  2NVT K;  4QIW D;  1TWC K;  1I50 K;  1YNJ A;  3HOU C;  4YFX A;  3GTG C;  5C4X C;  3H3V L;  4OIN A;  4BBS C;  1SMY A;  3DXJ A;  3S14 K;  1I6V A;  3S15 K;  3S1R C;  3S2D C;  5FJ8 K;  3S1N K;  4A3G K;  1HQM A;  3PO2 K;  3WOD A;  5IP9 K;  2YU9 C;  1TWF K;  1WCM C;  4AYB L;  1R9T C;  4A3C K;  1Y1V K;  4Y7N C;  2PPB A;  2R92 K;  3H0G C;  3K7A C;  5IYD C;  3M3Y C;  1TWA K;  3HOX K;  3GTK K;  3I4N K;  3GTP C;  2Y0S L;  3I4M K;  2JA5 K;  4C3H C;  3M4O C;  4G7Z A;  1SFO C;  5IP7 C;  4A3B C;  3GTO C;  1TWG C;  2A68 A;  2BE5 A;  4YFN A;  2WB1 L;  5C44 K;  5IYC C;  3CQZ C;  4C3J K;  2O5J A;  2B63 C;  4Y52 K;  4BXX C;  4C3I C;  4A93 K;  2PMZ D;  2JA6 K;  4X6A K;  1I3Q C;  2WAQ D;  4A3I C;  3GTJ K;  1YNN A;  5IYB C;  2VUM K;  3GTM C;  3HOZ C;  5M3M K;  4QJV A;  5D4D A;  4OIO A;  4BY7 K;  5C4J C;  2R93 C;  4A3J C;  1K83 C;  4JK1 A;  3PO3 C;  3S16 C;  3RZD K;  4AYB D;  1I6H C;  1TWH K;  2R7Z K;  4XSX A;  3GTQ K;  2NVQ K;  3S1Q K;  1BDF A;  4A3K K;  2PA8 D;  1Y1W C;  3S2H C;  3HKZ L;  4BBR K;  4C2M K;  4LLG A;  5C4X K;  3HOU K;  3GTG K;  2NVY K;  2Y0S D;  4BBS K;  4ZH4 A;  3S1N C;  3S1R K;  2WB1 D;  4Q4Z A;  3EQL A;  4MEX A;  4OIQ A;  2JA8 C;  2YU9 K;  1R9T K;  4BY1 C;  4A3F C;  1TWA C;  2E2I C;  3H0G K;  3K7A K;  3HOX C;  3GTK C;  4QIW L;  3M3Y K;  4G7H A;  3I4M C;  2JA5 C;  3GTP K;  3S17 C;  3H3V D;  3HOV C;  3S1M C;  4G7O A;  3M4O K;  1SFO K;  4KN7 A;  3FKI C;  2E2J C;  3HOY C;  4A3L C;  5IP7 K;  3GTO K;  4A3B K;  1TWG K;  4Y52 C;  3CQZ K;  5FLM K;  2B63 K;  4XLP A;  3HOW C;  4A93 C;  4A3E C;  2JA6 C;  1IW7 A;  4X6A C;  4C3I K;  5M5W K;  2NVX K;  4MEY A;  2A69 A;  2JA7 C;  1I3Q K;  3RZO C;  4A3D C;  5TMC A;  3GTL C;  2NVT C;  4MQ9 A;  1TWC C;  2VUM C;  1I50 C;  5C3E K;  3S15 C;  5IYB K;  3S14 C;  3S2D K;  2A6H A;  5C4J K;  4A3G C;  3PO2 C;  4A3J K;  2R93 K;  4OIP A;  4XSZ A;  1TWH C;  5IP9 C;  2CW0 A;  1TWF C;  4NOI A;  4A3C C;  1K83 K;  5M3F K;  2PMZ L;  3PO3 K;  4GZY A;  1WCM K;  1Y1V C;  2WAQ L;  4A3K C;  4C2M C;  4KMU A;  2R92 C;  4LK0 A;  4Y7N K;  1Y1W K;  3S2H K;  5IYD K;  2NVY C;  2A6E A;  4OIR A;  3I4N C;  2E2H K;  4XLN A;  5TMF A;  5M5X K;  4C3H K;  5M5Y K;  4A3M C;  5C44 C;  2E2H C;  2O5I A;  1XPP A;  4C3J C;  2JA8 K;  5IYC K;  4BXX K;  4BY1 K;  4YG2 A;  2PA8 L;  4A3F K;  2E2I K;  1ZYR A;  4LK1 A;  3HKZ D;  3GTJ C;  3S17 K;  4A3I K;  4YFK A;  3HOV K;  3S1M K;  3GTM K;  3FKI K;  2E2J K;  3HOY K;  3HOZ K;  4A3L K;  4BY7 C;  4QJV B;  5FLM C;  4KN4 A;  4LJZ A;  2NVX C;  2R7Z C;  3RZD C;  4Q5S A;  4A3M K;  3HOW K;  4A3E K;  3S16 K;  3GTQ C;  2NVQ C;  1I6H K;  3S1Q C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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