1IW7A

Crystal structure of the rna polymerase holoenzyme from thermus thermophilus at 2.6a resolution
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
229
structure length
229
Chain Sequence
MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords RNA polymerase alpha subunit
publication title Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution
pubmed doi rcsb
molecule tags Transferase
total genus 40
structure length 229
sequence length 229
chains with identical sequence B, K, L
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2002-04-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1iw7A02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1iw7A01
5M5XK 3GTGC 5IYCC 1Y1VK 4MQ9A 1Y1WC 2O5IA 4ZH4A 3GTMC 3I4NC 1TWHK 1R9TK 2R92K 3GTOK 5TMCA 3GTPC 3HOVC 4A3BK 2JA5K 2R93C 2PMZL 3HOUK 2E2JK 4A3FC 3M4OC 4A3JC 3HOWC 1I6VA 3PO3C 4G7HA 4A3DC 5FLMK 4XLNA 4OIQA 1BDFA 2NVTK 3HOYK 4A3IC 1ZYRA 4BBRC 4C3IK 3GTLK 1K83C 2R7ZC 1I3QK 4BXXK 1I6HC 4G7ZA 1SFOC 3S14C 5IP9K 5C4XK 3S2DK 3S16C 5FJ8K 5M3FK 4Y7NC 5IYDC 4QJVA 2JA6C 4BBSK 2VUMK 2WB1L 2NVXK 1YNNA 3WODA 2PPBA 2NVYK 1TWCK 3EQLA 4X6AC 4Y52C 4A93K 4A3LK 1TWGK 4C3HK 1I50C 5IYBC 4YFKA 2E2IC 4C2MK 3S1MK 3DXJA 4MEXA 3HKZD 2JA8C 1TWAK 3H3VD 1TWFK 4AYBD 3GTQK 1WCMK 3S17K 5C4JC 2E2HK 4YG2A 4A3CK 5IP7C 4A3KK 3GTKC 1I3QC 2A6HA 3CQZC 3FKIC 4QIWD 4YFXA 2A68A 4A3MC 3PO2C 3HOXK 4LK1A 3H3VL 5IP9C 4AYBL 4KN7A 3S1RC 3GTJK 5M3MK 2NVQC 1HQMA 2O5JA 3HOZC 4BY7K 4OIOA 4A3GK 3S2HK 3M3YC 3H0GK 2JA7C 4X6AK 2NVXC 2YU9K 3S1QK 2B63C 4Q5SA 3I4MC 1TWCC 4C3JC 4QIWL 4BY1C 3S1NK 3K7AC 5C44C 5M5WK 4LK0A 4A3LC 2WAQD 4XSXA 5C3EK 3RZDK 3GTGK 4C2MC 5IYCK 5M5YK 1Y1WK 1Y1VC 3GTMK 3I4NK 3GTOC 1R9TC 1TWHC 3GTPK 2R92C 3HOVK 1TWAC 4A3BC 2R93K 2JA5C 3HOUC 4A3FK 3M4OK 2E2JC 4A3JK 3S17C 3HOWK 2E2HC 4JK1A 5TMFA 4XLPA 3PO3K 5FLMC 4A3CC 4A3IK 2NVTC 3HOYC 4MEYA 4LJZA 4C3IC 4BBRK 4OIRA 3GTLC 1K83K 4BXXC 3HKZL 1SFOK 3S14K 3S2DC 3S16K 5C4XC 4A3GC 4Y7NK 2Y0SD 5IYDK 2JA6K 2YU9C 4BBSC 2VUMC 2PMZD 3RZOK 2NVYC 4Y52K 4NOIA 4A3EK 4A93C 3S15K 1I50K 4QJVB 4C3HC 1TWGC 5IYBK 2Y0SL 2E2IK 3S1MC 4KN4A 4XSZA 4OINA 2PA8D 2JA8K 1TWFC 4Q4ZA 3GTQC 1WCMC 2WAQL 5C4JK 4LLGA 4A3DK 4G7OA 2WB1D 5IP7K 3GTKK 4A3KC 3CQZK 1XPPA 1YNJA 2PA8L 3FKIK 3HOXC 4GZYA 4A3MK 3PO2K 2R7ZK 1IW7A 4OIPA 3S1RK 1I6HK 4YFNA 2NVQK 3GTJC 3HOZK 2CW0A 4BY7C 3M3YK 3S2HC 2JA7K 1SMYA 3H0GC 2A69A 2B63K 3S1QC 4C3JK 2A6EA 3RZOC 4BY1K 3I4MK 3K7AK 3S1NC 4A3EC 5C44K 3S15C 3RZDC 4KMUA 5D4DA 5C3EC 2BE5A
chains in the Genus database with same CATH superfamily
5JFEA 1Y1VK 4MQ9A 3GTOK 4ZH4A 3HXAA 1USMA 4LQYA 3HOVC 4A3BK 2ZUFA 1F9NA 2PMZL 4GTBA 4A3FC 4BLBA 1VH2A 3HOWC 4WILA 4G7HA 2NVYA 3GDZA 1BDFA 2NVTK 3GTLK 2ZJRS 1I3QK 5L46A 1WOOA 4GTCA 5C4XK 1DCOA 4QJVA 1VRQC 1PJ6A 1TWFA 3GTQA 1YNNA 2PPBA 3EQLA 4A93K 1I50C 4YFKA 4XCHA 3DXJA 1ZXOA 4MEXA 4WFBS 4BKWA 4AYBD 1WCMK 4PAAA 5C4JC 5CHPA 4YG2A 2PHCB 2ZJPS 4QIWD 4YFXA 3PO2C 3GTGA 4LK1A 3H3VL 3S1RC 1ISEA 4KM9A 4KMDA 2NVQC 1J6VA 2O5JA 3HOZC 1O24A 4A3GK 3S2HK 3N3YA 2B63C 1TWCC 4BY1C 3S1NK 5M5WK 3RZDK 4XSXA 1BJTA 1IL2A 1K83A 1Y1VC 3GTOC 4A3BC 4KB4A 1SFOA 3S17C 1XZPA 4DDQA 2NVTC 4BBRK 2GAHC 3GTLC 1F7VA 3HKZL 4FZBA 3LYWA 2JH3A 5C4XC 2JA6K 2YU9C 2PMZD 4Y52K 4A93C 3VA7A 1IBAA 1J98A 4OINA 1WIHA 2PA8D 1WQGA 5EGHA 4KDDA 3AD7C 2JA7A 4IO9S 1WCMC 1WOPA 1X31C 2NVXA 3JSTA 1F93A 5IP7K 1WORA 3CF5S 1YNJA 4GZYA 4OIPA 1TWHA 1EH1A 3G4CA 4GTDA 1JOEA 3S2HC 3N0CA 4G0VA 3I4MK 2FQTA 2E2HA 3S1NC 5HL7S 3RZDC 4KMAA 1B4AA 1R9TK 3TFJA 1F7UA 1WSRA 5TMCA 3FOEA 2RH6A 3OPFA 4A3DC 1XZQB 5FLMK 3HOYK 4BBRC 3CAGA 3IPJA 1HI9A 4KMHA 3GEIA 2JA6C 3GIRA 5DM6S 3WODA 2NVYK 1TWCK 1J6WA 5EGEA 4Y52C 5IOQA 1O29A 3HKZD 5TJ3A 1TWFK 3GTQK 2CFAB 3H0GA 3S17K 5IP7C 2A6HA 3MMLB 2KWAA 5IP9C 1Y1WA 3SZYA 3GTMA 4KN7A 5M3MK 3GTPA 1HQMA 1BS2A 3AQOA 2R93A 4C45A 4X6AK 2YU9K 3I4MC 2GSOA 4A3LC 4PABA 3GTGK 4O2DA 2XCOA 1R9TC 1ZBSA 1INNA 3LAJA 2KQ1A 2XCQA 3DLLS 4A3JK 4XLPA 3PO3K 5FLMC 3T02A 4A3IK 3HOYC 4WJ4A 4MEYA 2XCRB 4OIRA 1AB4A 1K83K 1J6XA 2E2IA 1SFOK 2V6UA 2P8TA 4GTAA 1O2FB 2NVYC 4GT9A 1JVIA 2ZFZA 4QJVB 3GTKA 1I3QA 3CQZA 2Y0SL 3AQPA 3FKIA 3GSIA 2R7ZA 4XSZA 2JA8K 4AH6A 4IOAS 1TWFC 3GTQC 3T00A 2WAQL 4A3DK 5IOSA 1V5VA 1VGXA 1IW7A 4WFAS 5HL8A 2R92A 3PIOS 1BGWA 2JA5A 2JA7K 2ZUEA 2A69A 3AD9C 4WJ3M 3RZOC 3BUEA 3K7AK 3S15C 1DD5A 1DCHA 5D4DA 1XXAA 2BE5A 4G0WA 3LAPA 3GTGC 1RU0A 2O5IA 1TWHK 5CJ9A 3HOUK 3T01A 4A3JC 1O28A 1I6VA 2VUMA 3PO3C 4FM9A 4OIQA 4A3IC 1ZYRA 4LOWA 1TWGA 1K83C 2R7ZC 1VJEA 1XZPB 1SFOC 1WQHA 5HQHA 5IP9K 3S2DK 3A8IA 1IQ0A 1XXBA 2V6SA 1TWAA 4P5AA 4A3LK 4C3HK 4KAWX 2JA8C 3GTJA 3H3VD 4WF9S 4KATA 2A68A 3OREA 4AYBL 4BY7K 1GE9A 4OIOA 1O2BA 3H0GK 2JA7C 2NVXC 1EK8A 5IORA 3S1QK 4Q5SA 4P5BA 4QIWL 3K7AC 3LPXA 2WAQD 4LR2A 4C2MC 5IYCK 1Y1WK 1IE0A 3GTMK 3I4NK 3SZZA 1TWHC 3GTPK 1TWAC 1YCLA 2GAGC 2R93K 1O2AA 3HOUC 4GTFA 3M4OK 2E2HC 4A3CC 1WOSA 1I50A 1EFWA 3S14K 3S2DC 2Y3PA 3S16K 3PIPS 4Y7NK 5IYDK 3ERED 2EBBA 3RZOK 3V4GA 3S15K 4C3HC 5IYBK 2E2IK 4GTLA 3BP8C 4Q4ZA 2B63A 1TWCA 1PJ5A 4LLGA 2D6FC 3GTKK 3CQZK 1ZQ1C 3FKIK 2PA8L 4P9SA 4A3MK 2R7ZK 1Y1VA 3GTOA 1G51A 1O25A 2CW0A 5JVHS 4BY7C 3M3YK 1SMYA 3H0GC 3OEPA 3S1QC 4C3JK 1KQ4A 5C44K 4A3EC 3TFHA 3AH5A 5M5XK 3GTLA 5IYCC 1Y1WC 3GTMC 3I4NC 2R92K 3GTPC 1IS1A 2JA5K 2R93C 2E2JK 3M4OC 2YU9A 3ADAC 3A8KA 4XLNA 3AD8C 4C3IK 4BXXK 4KASA 1I6HC 4G7ZA 3S14C 3S16C 5FJ8K 5IOTA 4Y7NC 5IYDC 1O26A 5M3FK 4BBSK 2VUMK 2WB1L 2NVXK 1WCMA 4GTEA 1USOA 4X6AC 1ZVUA 1WSVA 1TWGK 2V6TA 4G0UA 5IYBC 1EQRA 4C2MK 2E2IC 4J3NA 1EI6A 5JVOA 4GFQA 3S1MK 4BLAA 4IOCS 1TWAK 1C0AA 4KB2A 2E2HK 3A8JA 2L3UA 3L4JA 1XXCA 4A3CK 4A3KK 3GTKC 1I3QC 3CQZC 3GEEA 3FKIC 4A3MC 3HOXK 2GSUA 4M1XA 4WFNS 3GTJK 1JQWA 3GEHA 3M3YC 2GSNA 4KARA 4C3JC 2P5MA 5JVGS 1PJ7A 5C44C 1WQFA 3FHZA 4LK0A 5C3EK 3TFIA 5M5YK 5E68A 1XZQA 3NUHA 2R92C 3HOVK 2L5NA 2JA5C 5DM7S 4A3FK 2JA6A 2E2JC 3HOWK 4JK1A 5TMFA 2FQOA 4LJZA 4C3IC 3L4KA 4ILDA 4BXXC 1O27A 4WCES 4A3GC 2Y0SD 1FEUA 2KPUA 4BBSC 4RMFA 3BP3A 2VUMC 3Q3QA 3G4AA 4NOIA 4A3EK 1I50K 1TWGC 2W7VA 2CFAA 3S1MC 4KN4A 2KXYA 3FOFA 4KM8A 5C4JK 2RGRA 4G7OA 2WB1D 4A3KC 3N0BA 1XPPA 3QX3A 3S0XA 3HOXC 1B4BA 3PO2K 4U67S 1YX2A 3S1RK 1I6HK 4YFNA 3TTGA 1R9TA 2NVQK 3GTJC 1DCPA 3HOZK 1VLOA 2ZJQS 2B63K 2A6EA 4BY1K 1UV7A 1L0WA 4KMUA 5C3EC 4KC6A
chains in the Genus database with same CATH topology
5M5XK 3GTGC 5IYCC 1Y1VK 4MQ9A 1Y1WC 2O5IA 4ZH4A 3GTMC 3I4NC 1TWHK 1R9TK 2R92K 3GTOK 5TMCA 3GTPC 3HOVC 4A3BK 2JA5K 2R93C 2PMZL 3HOUK 2E2JK 4A3FC 3M4OC 4A3JC 3HOWC 1I6VA 3PO3C 4G7HA 4A3DC 5FLMK 4XLNA 4OIQA 1BDFA 2NVTK 3HOYK 4A3IC 1ZYRA 4BBRC 4C3IK 3GTLK 1K83C 2R7ZC 1I3QK 4BXXK 1I6HC 4G7ZA 1SFOC 3S14C 5IP9K 5C4XK 3S2DK 3S16C 5FJ8K 5M3FK 4Y7NC 5IYDC 4QJVA 2JA6C 4BBSK 2VUMK 2WB1L 2NVXK 1YNNA 3WODA 2PPBA 2NVYK 1TWCK 3EQLA 4X6AC 4Y52C 4A93K 4A3LK 1TWGK 4C3HK 1I50C 5IYBC 4YFKA 2E2IC 4C2MK 3S1MK 3DXJA 4MEXA 3HKZD 2JA8C 1TWAK 3H3VD 1TWFK 4AYBD 3GTQK 1WCMK 3S17K 5C4JC 2E2HK 4YG2A 4A3CK 5IP7C 4A3KK 3GTKC 1I3QC 2A6HA 3CQZC 3FKIC 4QIWD 4YFXA 2A68A 4A3MC 3PO2C 3HOXK 4LK1A 3H3VL 5IP9C 4AYBL 4KN7A 3S1RC 3GTJK 5M3MK 2NVQC 1HQMA 2O5JA 3HOZC 4BY7K 4OIOA 4A3GK 3S2HK 3M3YC 3H0GK 2JA7C 4X6AK 2NVXC 2YU9K 3S1QK 2B63C 4Q5SA 3I4MC 1TWCC 4C3JC 4QIWL 4BY1C 3S1NK 3K7AC 5C44C 5M5WK 4LK0A 4A3LC 2WAQD 4XSXA 5C3EK 3RZDK 3GTGK 4C2MC 5IYCK 5M5YK 1Y1WK 1Y1VC 3GTMK 3I4NK 3GTOC 1R9TC 1TWHC 3GTPK 2R92C 3HOVK 1TWAC 4A3BC 2R93K 2JA5C 3HOUC 4A3FK 3M4OK 2E2JC 4A3JK 3S17C 3HOWK 2E2HC 4JK1A 5TMFA 4XLPA 3PO3K 5FLMC 4A3CC 4A3IK 2NVTC 3HOYC 4MEYA 4LJZA 4C3IC 4BBRK 4OIRA 3GTLC 1K83K 4BXXC 3HKZL 1SFOK 3S14K 3S2DC 3S16K 5C4XC 4A3GC 4Y7NK 2Y0SD 5IYDK 2JA6K 2YU9C 4BBSC 2VUMC 2PMZD 3RZOK 2NVYC 4Y52K 4NOIA 4A3EK 4A93C 3S15K 1I50K 4QJVB 4C3HC 1TWGC 5IYBK 2Y0SL 2E2IK 3S1MC 4KN4A 4XSZA 4OINA 2PA8D 2JA8K 1TWFC 4Q4ZA 3GTQC 1WCMC 2WAQL 5C4JK 4LLGA 4A3DK 4G7OA 2WB1D 5IP7K 3GTKK 4A3KC 3CQZK 1XPPA 1YNJA 2PA8L 3FKIK 3HOXC 4GZYA 4A3MK 3PO2K 2R7ZK 1IW7A 4OIPA 3S1RK 1I6HK 4YFNA 2NVQK 3GTJC 3HOZK 2CW0A 4BY7C 3M3YK 3S2HC 2JA7K 1SMYA 3H0GC 2A69A 2B63K 3S1QC 4C3JK 2A6EA 3RZOC 4BY1K 3I4MK 3K7AK 3S1NC 4A3EC 5C44K 3S15C 3RZDC 4KMUA 5D4DA 5C3EC 2BE5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5M5X K;  3GTG C;  5IYC C;  1Y1V K;  4MQ9 A;  1Y1W C;  2O5I A;  4ZH4 A;  3GTM C;  3I4N C;  1TWH K;  1R9T K;  2R92 K;  3GTO K;  5TMC A;  3GTP C;  3HOV C;  4A3B K;  2JA5 K;  2R93 C;  2PMZ L;  3HOU K;  2E2J K;  4A3F C;  3M4O C;  4A3J C;  3HOW C;  1I6V A;  3PO3 C;  4G7H A;  4A3D C;  5FLM K;  4XLN A;  4OIQ A;  1BDF A;  2NVT K;  3HOY K;  4A3I C;  1ZYR A;  4BBR C;  4C3I K;  3GTL K;  1K83 C;  2R7Z C;  1I3Q K;  4BXX K;  1I6H C;  4G7Z A;  1SFO C;  3S14 C;  5IP9 K;  5C4X K;  3S2D K;  3S16 C;  5FJ8 K;  5M3F K;  4Y7N C;  5IYD C;  4QJV A;  2JA6 C;  4BBS K;  2VUM K;  2WB1 L;  2NVX K;  1YNN A;  3WOD A;  2PPB A;  2NVY K;  1TWC K;  3EQL A;  4X6A C;  4Y52 C;  4A93 K;  4A3L K;  1TWG K;  4C3H K;  1I50 C;  5IYB C;  4YFK A;  2E2I C;  4C2M K;  3S1M K;  3DXJ A;  4MEX A;  3HKZ D;  2JA8 C;  1TWA K;  3H3V D;  1TWF K;  4AYB D;  3GTQ K;  1WCM K;  3S17 K;  5C4J C;  2E2H K;  4YG2 A;  4A3C K;  5IP7 C;  4A3K K;  3GTK C;  1I3Q C;  2A6H A;  3CQZ C;  3FKI C;  4QIW D;  4YFX A;  2A68 A;  4A3M C;  3PO2 C;  3HOX K;  4LK1 A;  3H3V L;  5IP9 C;  4AYB L;  4KN7 A;  3S1R C;  3GTJ K;  5M3M K;  2NVQ C;  1HQM A;  2O5J A;  3HOZ C;  4BY7 K;  4OIO A;  4A3G K;  3S2H K;  3M3Y C;  3H0G K;  2JA7 C;  4X6A K;  2NVX C;  2YU9 K;  3S1Q K;  2B63 C;  4Q5S A;  3I4M C;  1TWC C;  4C3J C;  4QIW L;  4BY1 C;  3S1N K;  3K7A C;  5C44 C;  5M5W K;  4LK0 A;  4A3L C;  2WAQ D;  4XSX A;  5C3E K;  3RZD K;  3GTG K;  4C2M C;  5IYC K;  5M5Y K;  1Y1W K;  1Y1V C;  3GTM K;  3I4N K;  3GTO C;  1R9T C;  1TWH C;  3GTP K;  2R92 C;  3HOV K;  1TWA C;  4A3B C;  2R93 K;  2JA5 C;  3HOU C;  4A3F K;  3M4O K;  2E2J C;  4A3J K;  3S17 C;  3HOW K;  2E2H C;  4JK1 A;  5TMF A;  4XLP A;  3PO3 K;  5FLM C;  4A3C C;  4A3I K;  2NVT C;  3HOY C;  4MEY A;  4LJZ A;  4C3I C;  4BBR K;  4OIR A;  3GTL C;  1K83 K;  4BXX C;  3HKZ L;  1SFO K;  3S14 K;  3S2D C;  3S16 K;  5C4X C;  4A3G C;  4Y7N K;  2Y0S D;  5IYD K;  2JA6 K;  2YU9 C;  4BBS C;  2VUM C;  2PMZ D;  3RZO K;  2NVY C;  4Y52 K;  4NOI A;  4A3E K;  4A93 C;  3S15 K;  1I50 K;  4QJV B;  4C3H C;  1TWG C;  5IYB K;  2Y0S L;  2E2I K;  3S1M C;  4KN4 A;  4XSZ A;  4OIN A;  2PA8 D;  2JA8 K;  1TWF C;  4Q4Z A;  3GTQ C;  1WCM C;  2WAQ L;  5C4J K;  4LLG A;  4A3D K;  4G7O A;  2WB1 D;  5IP7 K;  3GTK K;  4A3K C;  3CQZ K;  1XPP A;  1YNJ A;  2PA8 L;  3FKI K;  3HOX C;  4GZY A;  4A3M K;  3PO2 K;  2R7Z K;  1IW7 A;  4OIP A;  3S1R K;  1I6H K;  4YFN A;  2NVQ K;  3GTJ C;  3HOZ K;  2CW0 A;  4BY7 C;  3M3Y K;  3S2H C;  2JA7 K;  1SMY A;  3H0G C;  2A69 A;  2B63 K;  3S1Q C;  4C3J K;  2A6E A;  3RZO C;  4BY1 K;  3I4M K;  3K7A K;  3S1N C;  4A3E C;  5C44 K;  3S15 C;  3RZD C;  4KMU A;  5D4D A;  5C3E C;  2BE5 A; 
#chains in the Genus database with same CATH topology
 5JFE A;  1Y1V K;  4MQ9 A;  3GTO K;  4ZH4 A;  3HXA A;  1USM A;  4LQY A;  3HOV C;  4A3B K;  2ZUF A;  1F9N A;  2PMZ L;  4GTB A;  4A3F C;  4BLB A;  1VH2 A;  3HOW C;  4WIL A;  4G7H A;  2NVY A;  3GDZ A;  1BDF A;  2NVT K;  3GTL K;  2ZJR S;  1I3Q K;  5L46 A;  1WOO A;  4GTC A;  5C4X K;  1DCO A;  4QJV A;  1VRQ C;  1PJ6 A;  1TWF A;  3GTQ A;  1YNN A;  2PPB A;  3EQL A;  4A93 K;  1I50 C;  4YFK A;  4XCH A;  3DXJ A;  1ZXO A;  4MEX A;  4WFB S;  4BKW A;  4AYB D;  1WCM K;  4PAA A;  5C4J C;  5CHP A;  4YG2 A;  2PHC B;  2ZJP S;  4QIW D;  4YFX A;  3PO2 C;  3GTG A;  4LK1 A;  3H3V L;  3S1R C;  1ISE A;  4KM9 A;  4KMD A;  2NVQ C;  1J6V A;  2O5J A;  3HOZ C;  1O24 A;  4A3G K;  3S2H K;  3N3Y A;  2B63 C;  1TWC C;  4BY1 C;  3S1N K;  5M5W K;  3RZD K;  4XSX A;  1BJT A;  1IL2 A;  1K83 A;  1Y1V C;  3GTO C;  4A3B C;  4KB4 A;  1SFO A;  3S17 C;  1XZP A;  4DDQ A;  2NVT C;  4BBR K;  2GAH C;  3GTL C;  1F7V A;  3HKZ L;  4FZB A;  3LYW A;  2JH3 A;  5C4X C;  2JA6 K;  2YU9 C;  2PMZ D;  4Y52 K;  4A93 C;  3VA7 A;  1IBA A;  1J98 A;  4OIN A;  1WIH A;  2PA8 D;  1WQG A;  5EGH A;  4KDD A;  3AD7 C;  2JA7 A;  4IO9 S;  1WCM C;  1WOP A;  1X31 C;  2NVX A;  3JST A;  1F93 A;  5IP7 K;  1WOR A;  3CF5 S;  1YNJ A;  4GZY A;  4OIP A;  1TWH A;  1EH1 A;  3G4C A;  4GTD A;  1JOE A;  3S2H C;  3N0C A;  4G0V A;  3I4M K;  2FQT A;  2E2H A;  3S1N C;  5HL7 S;  3RZD C;  4KMA A;  1B4A A;  1R9T K;  3TFJ A;  1F7U A;  1WSR A;  5TMC A;  3FOE A;  2RH6 A;  3OPF A;  4A3D C;  1XZQ B;  5FLM K;  3HOY K;  4BBR C;  3CAG A;  3IPJ A;  1HI9 A;  4KMH A;  3GEI A;  2JA6 C;  3GIR A;  5DM6 S;  3WOD A;  2NVY K;  1TWC K;  1J6W A;  5EGE A;  4Y52 C;  5IOQ A;  1O29 A;  3HKZ D;  5TJ3 A;  1TWF K;  3GTQ K;  2CFA B;  3H0G A;  3S17 K;  5IP7 C;  2A6H A;  3MML B;  2KWA A;  5IP9 C;  1Y1W A;  3SZY A;  3GTM A;  4KN7 A;  5M3M K;  3GTP A;  1HQM A;  1BS2 A;  3AQO A;  2R93 A;  4C45 A;  4X6A K;  2YU9 K;  3I4M C;  2GSO A;  4A3L C;  4PAB A;  3GTG K;  4O2D A;  2XCO A;  1R9T C;  1ZBS A;  1INN A;  3LAJ A;  2KQ1 A;  2XCQ A;  3DLL S;  4A3J K;  4XLP A;  3PO3 K;  5FLM C;  3T02 A;  4A3I K;  3HOY C;  4WJ4 A;  4MEY A;  2XCR B;  4OIR A;  1AB4 A;  1K83 K;  1J6X A;  2E2I A;  1SFO K;  2V6U A;  2P8T A;  4GTA A;  1O2F B;  2NVY C;  4GT9 A;  1JVI A;  2ZFZ A;  4QJV B;  3GTK A;  1I3Q A;  3CQZ A;  2Y0S L;  3AQP A;  3FKI A;  3GSI A;  2R7Z A;  4XSZ A;  2JA8 K;  4AH6 A;  4IOA S;  1TWF C;  3GTQ C;  3T00 A;  2WAQ L;  4A3D K;  5IOS A;  1V5V A;  1VGX A;  1IW7 A;  4WFA S;  5HL8 A;  2R92 A;  3PIO S;  1BGW A;  2JA5 A;  2JA7 K;  2ZUE A;  2A69 A;  3AD9 C;  4WJ3 M;  3RZO C;  3BUE A;  3K7A K;  3S15 C;  1DD5 A;  1DCH A;  5D4D A;  1XXA A;  2BE5 A;  4G0W A;  3LAP A;  3GTG C;  1RU0 A;  2O5I A;  1TWH K;  5CJ9 A;  3HOU K;  3T01 A;  4A3J C;  1O28 A;  1I6V A;  2VUM A;  3PO3 C;  4FM9 A;  4OIQ A;  4A3I C;  1ZYR A;  4LOW A;  1TWG A;  1K83 C;  2R7Z C;  1VJE A;  1XZP B;  1SFO C;  1WQH A;  5HQH A;  5IP9 K;  3S2D K;  3A8I A;  1IQ0 A;  1XXB A;  2V6S A;  1TWA A;  4P5A A;  4A3L K;  4C3H K;  4KAW X;  2JA8 C;  3GTJ A;  3H3V D;  4WF9 S;  4KAT A;  2A68 A;  3ORE A;  4AYB L;  4BY7 K;  1GE9 A;  4OIO A;  1O2B A;  3H0G K;  2JA7 C;  2NVX C;  1EK8 A;  5IOR A;  3S1Q K;  4Q5S A;  4P5B A;  4QIW L;  3K7A C;  3LPX A;  2WAQ D;  4LR2 A;  4C2M C;  5IYC K;  1Y1W K;  1IE0 A;  3GTM K;  3I4N K;  3SZZ A;  1TWH C;  3GTP K;  1TWA C;  1YCL A;  2GAG C;  2R93 K;  1O2A A;  3HOU C;  4GTF A;  3M4O K;  2E2H C;  4A3C C;  1WOS A;  1I50 A;  1EFW A;  3S14 K;  3S2D C;  2Y3P A;  3S16 K;  3PIP S;  4Y7N K;  5IYD K;  3ERE D;  2EBB A;  3RZO K;  3V4G A;  3S15 K;  4C3H C;  5IYB K;  2E2I K;  4GTL A;  3BP8 C;  4Q4Z A;  2B63 A;  1TWC A;  1PJ5 A;  4LLG A;  2D6F C;  3GTK K;  3CQZ K;  1ZQ1 C;  3FKI K;  2PA8 L;  4P9S A;  4A3M K;  2R7Z K;  1Y1V A;  3GTO A;  1G51 A;  1O25 A;  2CW0 A;  5JVH S;  4BY7 C;  3M3Y K;  1SMY A;  3H0G C;  3OEP A;  3S1Q C;  4C3J K;  1KQ4 A;  5C44 K;  4A3E C;  3TFH A;  3AH5 A;  5M5X K;  3GTL A;  5IYC C;  1Y1W C;  3GTM C;  3I4N C;  2R92 K;  3GTP C;  1IS1 A;  2JA5 K;  2R93 C;  2E2J K;  3M4O C;  2YU9 A;  3ADA C;  3A8K A;  4XLN A;  3AD8 C;  4C3I K;  4BXX K;  4KAS A;  1I6H C;  4G7Z A;  3S14 C;  3S16 C;  5FJ8 K;  5IOT A;  4Y7N C;  5IYD C;  1O26 A;  5M3F K;  4BBS K;  2VUM K;  2WB1 L;  2NVX K;  1WCM A;  4GTE A;  1USO A;  4X6A C;  1ZVU A;  1WSV A;  1TWG K;  2V6T A;  4G0U A;  5IYB C;  1EQR A;  4C2M K;  2E2I C;  4J3N A;  1EI6 A;  5JVO A;  4GFQ A;  3S1M K;  4BLA A;  4IOC S;  1TWA K;  1C0A A;  4KB2 A;  2E2H K;  3A8J A;  2L3U A;  3L4J A;  1XXC A;  4A3C K;  4A3K K;  3GTK C;  1I3Q C;  3CQZ C;  3GEE A;  3FKI C;  4A3M C;  3HOX K;  2GSU A;  4M1X A;  4WFN S;  3GTJ K;  1JQW A;  3GEH A;  3M3Y C;  2GSN A;  4KAR A;  4C3J C;  2P5M A;  5JVG S;  1PJ7 A;  5C44 C;  1WQF A;  3FHZ A;  4LK0 A;  5C3E K;  3TFI A;  5M5Y K;  5E68 A;  1XZQ A;  3NUH A;  2R92 C;  3HOV K;  2L5N A;  2JA5 C;  5DM7 S;  4A3F K;  2JA6 A;  2E2J C;  3HOW K;  4JK1 A;  5TMF A;  2FQO A;  4LJZ A;  4C3I C;  3L4K A;  4ILD A;  4BXX C;  1O27 A;  4WCE S;  4A3G C;  2Y0S D;  1FEU A;  2KPU A;  4BBS C;  4RMF A;  3BP3 A;  2VUM C;  3Q3Q A;  3G4A A;  4NOI A;  4A3E K;  1I50 K;  1TWG C;  2W7V A;  2CFA A;  3S1M C;  4KN4 A;  2KXY A;  3FOF A;  4KM8 A;  5C4J K;  2RGR A;  4G7O A;  2WB1 D;  4A3K C;  3N0B A;  1XPP A;  3QX3 A;  3S0X A;  3HOX C;  1B4B A;  3PO2 K;  4U67 S;  1YX2 A;  3S1R K;  1I6H K;  4YFN A;  3TTG A;  1R9T A;  2NVQ K;  3GTJ C;  1DCP A;  3HOZ K;  1VLO A;  2ZJQ S;  2B63 K;  2A6E A;  4BY1 K;  1UV7 A;  1L0W A;  4KMU A;  5C3E C;  4KC6 A; 
#chains in the Genus database with same CATH homology
 5M5X K;  3GTG C;  5IYC C;  1Y1V K;  4MQ9 A;  1Y1W C;  2O5I A;  4ZH4 A;  3GTM C;  3I4N C;  1TWH K;  1R9T K;  2R92 K;  3GTO K;  5TMC A;  3GTP C;  3HOV C;  4A3B K;  2JA5 K;  2R93 C;  2PMZ L;  3HOU K;  2E2J K;  4A3F C;  3M4O C;  4A3J C;  3HOW C;  1I6V A;  3PO3 C;  4G7H A;  4A3D C;  5FLM K;  4XLN A;  4OIQ A;  1BDF A;  2NVT K;  3HOY K;  4A3I C;  1ZYR A;  4BBR C;  4C3I K;  3GTL K;  1K83 C;  2R7Z C;  1I3Q K;  4BXX K;  1I6H C;  4G7Z A;  1SFO C;  3S14 C;  5IP9 K;  5C4X K;  3S2D K;  3S16 C;  5FJ8 K;  5M3F K;  4Y7N C;  5IYD C;  4QJV A;  2JA6 C;  4BBS K;  2VUM K;  2WB1 L;  2NVX K;  1YNN A;  3WOD A;  2PPB A;  2NVY K;  1TWC K;  3EQL A;  4X6A C;  4Y52 C;  4A93 K;  4A3L K;  1TWG K;  4C3H K;  1I50 C;  5IYB C;  4YFK A;  2E2I C;  4C2M K;  3S1M K;  3DXJ A;  4MEX A;  3HKZ D;  2JA8 C;  1TWA K;  3H3V D;  1TWF K;  4AYB D;  3GTQ K;  1WCM K;  3S17 K;  5C4J C;  2E2H K;  4YG2 A;  4A3C K;  5IP7 C;  4A3K K;  3GTK C;  1I3Q C;  2A6H A;  3CQZ C;  3FKI C;  4QIW D;  4YFX A;  2A68 A;  4A3M C;  3PO2 C;  3HOX K;  4LK1 A;  3H3V L;  5IP9 C;  4AYB L;  4KN7 A;  3S1R C;  3GTJ K;  5M3M K;  2NVQ C;  1HQM A;  2O5J A;  3HOZ C;  4BY7 K;  4OIO A;  4A3G K;  3S2H K;  3M3Y C;  3H0G K;  2JA7 C;  4X6A K;  2NVX C;  2YU9 K;  3S1Q K;  2B63 C;  4Q5S A;  3I4M C;  1TWC C;  4C3J C;  4QIW L;  4BY1 C;  3S1N K;  3K7A C;  5C44 C;  5M5W K;  4LK0 A;  4A3L C;  2WAQ D;  4XSX A;  5C3E K;  3RZD K;  3GTG K;  4C2M C;  5IYC K;  5M5Y K;  1Y1W K;  1Y1V C;  3GTM K;  3I4N K;  3GTO C;  1R9T C;  1TWH C;  3GTP K;  2R92 C;  3HOV K;  1TWA C;  4A3B C;  2R93 K;  2JA5 C;  3HOU C;  4A3F K;  3M4O K;  2E2J C;  4A3J K;  3S17 C;  3HOW K;  2E2H C;  4JK1 A;  5TMF A;  4XLP A;  3PO3 K;  5FLM C;  4A3C C;  4A3I K;  2NVT C;  3HOY C;  4MEY A;  4LJZ A;  4C3I C;  4BBR K;  4OIR A;  3GTL C;  1K83 K;  4BXX C;  3HKZ L;  1SFO K;  3S14 K;  3S2D C;  3S16 K;  5C4X C;  4A3G C;  4Y7N K;  2Y0S D;  5IYD K;  2JA6 K;  2YU9 C;  4BBS C;  2VUM C;  2PMZ D;  3RZO K;  2NVY C;  4Y52 K;  4NOI A;  4A3E K;  4A93 C;  3S15 K;  1I50 K;  4QJV B;  4C3H C;  1TWG C;  5IYB K;  2Y0S L;  2E2I K;  3S1M C;  4KN4 A;  4XSZ A;  4OIN A;  2PA8 D;  2JA8 K;  1TWF C;  4Q4Z A;  3GTQ C;  1WCM C;  2WAQ L;  5C4J K;  4LLG A;  4A3D K;  4G7O A;  2WB1 D;  5IP7 K;  3GTK K;  4A3K C;  3CQZ K;  1XPP A;  1YNJ A;  2PA8 L;  3FKI K;  3HOX C;  4GZY A;  4A3M K;  3PO2 K;  2R7Z K;  1IW7 A;  4OIP A;  3S1R K;  1I6H K;  4YFN A;  2NVQ K;  3GTJ C;  3HOZ K;  2CW0 A;  4BY7 C;  3M3Y K;  3S2H C;  2JA7 K;  1SMY A;  3H0G C;  2A69 A;  2B63 K;  3S1Q C;  4C3J K;  2A6E A;  3RZO C;  4BY1 K;  3I4M K;  3K7A K;  3S1N C;  4A3E C;  5C44 K;  3S15 C;  3RZD C;  4KMU A;  5D4D A;  5C3E C;  2BE5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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