5C4JC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 45
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c4jC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c4jC01
3M4OC 4NOIA 3RZDC 2JA7K 4A93C 1YNNA 4A93K 4OINA 3GTQK 5IP7C 4A3LK 1Y1VC 2JA5C 1I3QK 2NVYK 4YFNA 3PO3C 4OIPA 5M5XK 4ZH4A 4BXXK 4Q4ZA 4MEYA 1R9TC 2O5IA 4XLNA 3I4NC 2JA6C 3H3VD 5C4XC 4Q5SA 4GZYA 2PA8L 3GTOK 2E2JC 4KN7A 3GTJK 4OIRA 1TWAK 1TWHK 1I3QC 1WCMK 4MQ9A 4Y7NC 5M3MK 4Y7NK 4AYBD 5M3FK 3S17C 5FJ8K 2NVXK 5C3EK 1SFOK 5C44K 4C3IK 3S15K 3GTGK 1K83K 1K83C 1XPPA 3PO3K 4QJVA 5FLMC 5TMCA 2R93C 3M3YC 3FKIK 4LJZA 2WB1L 3M3YK 2R93K 2PA8D 1Y1WC 3HKZD 2E2IC 4G7HA 1Y1WK 1IW7A 1TWCK 1TWHC 4A3MK 3GTJC 2O5JA 3GTPK 3HOZC 3HOZK 2B63C 1R9TK 3I4NK 1SFOC 2JA8K 2YU9K 3I4MC 4C3JC 3HOUK 2E2JK 3GTOC 2CW0A 4A3FC 3FKIC 4A3KK 1BDFA 3S1MK 5IP9K 5D4DA 4G7ZA 4A3CK 4A3MC 5C3EC 4G7OA 3S14K 3HOVC 2JA7C 2NVQC 2PMZD 3HOUC 5IYDC 2A6HA 2WAQD 4BY1C 4C3IC 4LK0A 2NVYC 3H3VL 3S1NC 2R92C 3S1NK 4A3KC 3S1QK 2R7ZC 2WB1D 3K7AK 3K7AC 3I4MK 3S2DC 4YFKA 1TWFC 3HOXK 4A3BK 3WODA 4BBRC 1I50K 5IP9C 2NVQK 5IYDK 5IP7K 1TWGC 4OIQA 4KN4A 5TMFA 2A69A 4C3JK 4XLPA 3GTKK 4BY1K 3GTGC 4X6AK 4A3DK 1TWFK 4Y52C 5IYCK 5IYBC 5FLMK 4A3FK 2E2HK 3S1RC 3GTMC 5C4JK 3S1MC 3H0GC 3HOXC 3GTLC 4BY7C 4LK1A 1YNJA 4C3HK 2E2IK 2A68A 3GTLK 4A3IK 1HQMA 3RZOC 4OIOA 4C2MC 3S14C 3S17K 3GTPC 2VUMC 2PPBA 2BE5A 3DXJA 3HOWC 3CQZC 3S16C 4A3GC 2R92K 4Y52K 4BXXC 2B63K 4A3JK 4A3JC 3GTKC 3EQLA 2E2HC 5C44C 4AYBL 5IYCC 4X6AC 1TWCC 4A3IC 3PO2K 4QIWL 4BBSC 4BBSK 1I50C 4XSXA 3H0GK 4BBRK 4A3GK 3S2HC 4BY7K 3CQZK 5C4JC 3GTMK 3RZDK 1TWGK 4QIWD 2Y0SD 2NVXC 4A3EC 4A3EK 4C2MK 3RZOK 4KMUA 4C3HC 2JA8C 5M5WK 4A3DC 4JK1A 2Y0SL 3HOYC 3HKZL 2VUMK 3HOWK 3S1RK 4QJVB 5C4XK 2NVTK 2JA6K 1TWAC 3M4OK 3PO2C 4A3BC 2PMZL 2WAQL 1Y1VK 2JA5K 3HOVK 3S16K 1I6HK 1I6VA 4A3CC 4LLGA 2YU9C 4XSZA 4YFXA 1ZYRA 3S1QC 3S15C 5M5YK 4YG2A 2NVTC 3GTQC 4A3LC 2A6EA 3S2DK 2R7ZK 5IYBK 3HOYK 1I6HC 1WCMC 3S2HK 4MEXA 1SMYA
chains in the Genus database with same CATH superfamily
1TWGA 3RZDC 2JA7K 4A93C 1YNNA 4OINA 1O27A 3GIRA 3A8IA 3I4NC 2O5IA 3TFHA 4XLNA 4GZYA 1WOPA 3GTLA 4KN7A 2KPUA 3OEPA 5L46A 1TWAK 4WILA 3S17C 5FJ8K 1WOOA 2NVXK 1XXAA 3GTKA 1SFOK 5C44K 3S15K 1WQHA 1WSRA 1WIHA 5E68A 2KXYA 4LJZA 2WB1L 1Y1WK 2E2IC 1TWCK 3GTJC 3HOZC 3HOZK 4GTAA 4ILDA 2NVXA 1R9TK 3ADAC 4C3JC 2L5NA 5JVHS 3GTOC 4WJ4A 5HQHA 1F7UA 3S14K 2NVQC 1I3QA 1PJ6A 5IYDC 2A6HA 2WAQD 4C3IC 4LK0A 2NVYC 3MMLB 3S1NC 3S1QK 2WB1D 3LAPA 2V6SA 4FZBA 4WFNS 4BBRC 5IP9C 2GAGC 1Y1WA 4KN4A 1J6WA 4G0UA 3T00A 1IL2A 3GTGC 2KWAA 1TWFK 4Y52C 4A3FK 3AD7C 2CFAB 3AQPA 1SFOA 4U67S 3H0GC 4BY7C 2GSUA 4LK1A 4GTCA 4A3IK 3RZOC 4OIOA 3DXJA 1XZQB 4BXXC 3EQLA 1JQWA 3QX3A 5HL8A 5IYCC 4X6AC 2P5MA 1EH1A 1EFWA 3H0GK 4BY7K 3CQZK 3RZDK 1TWGK 2NVXC 3RZOK 4A3EC 3T01A 3HOYC 3HKZL 4GT9A 1VRQC 1UV7A 1HI9A 1JVIA 1ZBSA 3HOVK 1BS2A 1Y1VK 4C45A 1I6HK 2YU9C 4YFXA 3S1QC 3S15C 3L4KA 3DLLS 4A3LC 2VUMA 5CHPA 2KQ1A 1O24A 3HOYK 1IE0A 1PJ7A 4A3MC 1EI6A 1TWFA 4NOIA 1TWCA 1WSVA 3GTQK 3S0XA 5IP7C 3GTGA 1WQGA 2NVYK 4YFNA 4ZH4A 3Q3QA 4KATA 2EBBA 1R9TC 5C4XC 1VH2A 3H3VD 3GTOK 5JVGS 1WOSA 2V6UA 1TWHK 2L3UA 4Y7NC 5M3MK 2ZJPS 1TWAA 3G4AA 3GTGK 3A8JA 1K83K 1K83C 3CQZA 3PO3K 1ZVUA 5TMCA 2R93C 3FKIK 4IO9S 2RGRA 3JSTA 4O2DA 3HKZD 1TWHC 3LPXA 3I4NK 1RU0A 2JA8K 4KB2A 1DCHA 3S1MK 1ZQ1C 5D4DA 4G7ZA 1YX2A 5JVOA 5IOSA 4A3CK 2JA6A 5C3EC 1O2FB 1B4BA 4BLAA 2JA7C 2XCRB 3G4CA 1INNA 2FQTA 2R7ZC 1O26A 3GTQA 3K7AK 3I4MK 3S2DC 2JH3A 4LQYA 1TWFC 3HOXK 4WF9S 4IOCS 5JFEA 4OIQA 5TMFA 2XCQA 2A69A 2Y3PA 2JA5A 2GAHC 5IYBC 2V6TA 3GTMC 4KMAA 3A8KA 3FKIA 1XZQA 3S14C 3S17K 3GTPC 3HOWC 2BE5A 3S16C 1USMA 3CQZC 1GE9A 2B63K 4A3JC 2R93A 2D6FC 2E2HC 3FHZA 3LYWA 4A3IC 1F93A 1TWHA 4QIWL 4G0WA 4BBSK 2ZFZA 1I50C 4A3GK 4KMDA 4KMUA 1DD5A 4DDQA 2B63A 2ZUEA 1XXBA 5C4XK 2NVTK 2JA6K 4GFQA 3GSIA 3CF5S 3L4JA 3M4OK 2PMZL 4PAAA 2JA5K 2W7VA 1I6VA 4LLGA 1USOA 3AH5A 2R7ZA 3GTQC 2E2IA 2R92A 3GTJA 1I6HC 4MEXA 3M4OC 3ERED 4A93K 4A3LK 3GTOA 2JA5C 5M5XK 4OIPA 4BXXK 4Q4ZA 4MEYA 4GTDA 3TFIA 2PA8L 3GTMA 4KDDA 2E2JC 3GTJK 4OIRA 1I3QC 1WCMK 4MQ9A 5M3FK 4AYBD 5IOTA 1L0WA 5C3EK 2E2HA 1XPPA 4QJVA 3CAGA 4FM9A 3M3YK 3M3YC 3OPFA 1Y1WC 3GDZA 1IW7A 4A3MK 1DCPA 3BP8C 1ISEA 3GTPK 2B63C 1WCMC 1SFOC 1O2AA 1XZPA 3H0GA 3HOUK 2CW0A 1V5VA 3PIOS 1EK8A 5IP9K 1O25A 4KM8A 1WORA 3HOVC 2PMZD 4WCES 3S1NK 2R92C 4A3KC 1XXCA 4M1XA 4A3BK 1I50K 4KAWX 1Y1VA 3BP3A 4X6AK 4KM9A 5IYCK 2ZUFA 5FLMK 2E2HK 5C4JK 3S1MC 1YNJA 4J3NA 4C3HK 1HQMA 4C2MC 2VUMC 2PPBA 4A3GC 3NUHA 1YCLA 5EGEA 4BKWA 2NVYA 1TWCC 3TTGA 4KARA 3LAJA 3S2HC 1EQRA 5C4JC 1FEUA 4LR2A 4QIWD 1J98A 4A3EK 1R9TA 1PJ5A 4C2MK 1F7VA 4C3HC 4A3DC 1J6VA 2Y0SL 2VUMK 4IOAS 3S1RK 4QJVB 4P5BA 1TWAC 3SZYA 4GTLA 1VLOA 4KB4A 1K83A 3S16K 4A3CC 5M5YK 1C0AA 3VA7A 2NVTC 4KMHA 2PHCB 2R7ZK 4LOWA 1IQ0A 5IYBK 3PIPS 1X31C 5DM6S 1SMYA 3SZZA 1G51A 1Y1VC 4BLBA 3PO3C 5EGHA 2YU9K 3IPJA 2JA6C 2GSNA 4Q5SA 3AQOA 4PABA 4Y7NK 4KC6A 4C3IK 3N0CA 5FLMC 2YU9A 2R93K 2PA8D 3HXAA 4G7HA 5IORA 1AB4A 2O5JA 5CJ9A 3OREA 2ZJQS 3I4MC 2E2JK 1F9NA 4A3FC 3FKIC 4A3KK 1BDFA 4G7OA 3N3YA 1DCOA 1KQ4A 4GTEA 4WFAS 3HOUC 4BY1C 3H3VL 1ZXOA 1O29A 3BUEA 1I50A 3AD8C 3V4GA 4WJ3M 3K7AC 1VGXA 4YFKA 2GSOA 3WODA 1WCMA 2NVQK 5IYDK 1B4AA 5IP7K 1TWGC 2XCOA 4C3JK 4XLPA 3GTKK 4BY1K 4G0VA 4A3DK 1BJTA 5DM7S 3S1RC 4GTBA 3HOXC 3GTLC 1J6XA 3GTLK 2E2IK 2A68A 1O28A 4RMFA 2R92K 4Y52K 4A3JK 3GTKC 2RH6A 5C44C 4WFBS 2JA7A 2ZJRS 4AYBL 1JOEA 3GEHA 2CFAA 5TJ3A 3PO2K 4BBSC 3TFJA 4BBRK 4XSXA 4AH6A 3GTMK 2Y0SD 5M5WK 2JA8C 4JK1A 2FQOA 1BGWA 3HOWK 4KASA 4GTFA 1IS1A 3N0BA 3T02A 4P5AA 3PO2C 4A3BC 5IOQA 3GEEA 2WAQL 1O2BA 4XCHA 1VJEA 5HL7S 2P8TA 4XSZA 1ZYRA 3FOEA 4YG2A 3FOFA 4P9SA 3GTPA 2A6EA 3S2DK 3AD9C 1WQFA 3GEIA 1I3QK 3S2HK 1IBAA 1XZPB
chains in the Genus database with same CATH topology
3M4OC 4NOIA 3RZDC 2JA7K 4A93C 1YNNA 4A93K 4OINA 3GTQK 5IP7C 4A3LK 1Y1VC 2JA5C 1I3QK 2NVYK 4YFNA 3PO3C 4OIPA 5M5XK 4ZH4A 4BXXK 4Q4ZA 4MEYA 1R9TC 2O5IA 4XLNA 3I4NC 2JA6C 3H3VD 5C4XC 4Q5SA 4GZYA 2PA8L 3GTOK 2E2JC 4KN7A 3GTJK 4OIRA 1TWAK 1TWHK 1I3QC 1WCMK 4MQ9A 4Y7NC 5M3MK 4Y7NK 4AYBD 5M3FK 3S17C 5FJ8K 2NVXK 5C3EK 1SFOK 5C44K 4C3IK 3S15K 3GTGK 1K83K 1K83C 1XPPA 3PO3K 4QJVA 5FLMC 5TMCA 2R93C 3M3YC 3FKIK 4LJZA 2WB1L 3M3YK 2R93K 2PA8D 1Y1WC 3HKZD 2E2IC 4G7HA 1Y1WK 1IW7A 1TWCK 1TWHC 4A3MK 3GTJC 2O5JA 3GTPK 3HOZC 3HOZK 2B63C 1R9TK 3I4NK 1SFOC 2JA8K 2YU9K 3I4MC 4C3JC 3HOUK 2E2JK 3GTOC 2CW0A 4A3FC 3FKIC 4A3KK 1BDFA 3S1MK 5IP9K 5D4DA 4G7ZA 4A3CK 4A3MC 5C3EC 4G7OA 3S14K 3HOVC 2JA7C 2NVQC 2PMZD 3HOUC 5IYDC 2A6HA 2WAQD 4BY1C 4C3IC 4LK0A 2NVYC 3H3VL 3S1NC 2R92C 3S1NK 4A3KC 3S1QK 2R7ZC 2WB1D 3K7AK 3K7AC 3I4MK 3S2DC 4YFKA 1TWFC 3HOXK 4A3BK 3WODA 4BBRC 1I50K 5IP9C 2NVQK 5IYDK 5IP7K 1TWGC 4OIQA 4KN4A 5TMFA 2A69A 4C3JK 4XLPA 3GTKK 4BY1K 3GTGC 4X6AK 4A3DK 1TWFK 4Y52C 5IYCK 5IYBC 5FLMK 4A3FK 2E2HK 3S1RC 3GTMC 5C4JK 3S1MC 3H0GC 3HOXC 3GTLC 4BY7C 4LK1A 1YNJA 4C3HK 2E2IK 2A68A 3GTLK 4A3IK 1HQMA 3RZOC 4OIOA 4C2MC 3S14C 3S17K 3GTPC 2VUMC 2PPBA 2BE5A 3DXJA 3HOWC 3CQZC 3S16C 4A3GC 2R92K 4Y52K 4BXXC 2B63K 4A3JK 4A3JC 3GTKC 3EQLA 2E2HC 5C44C 4AYBL 5IYCC 4X6AC 1TWCC 4A3IC 3PO2K 4QIWL 4BBSC 4BBSK 1I50C 4XSXA 3H0GK 4BBRK 4A3GK 3S2HC 4BY7K 3CQZK 5C4JC 3GTMK 3RZDK 1TWGK 4QIWD 2Y0SD 2NVXC 4A3EC 4A3EK 4C2MK 3RZOK 4KMUA 4C3HC 2JA8C 5M5WK 4A3DC 4JK1A 2Y0SL 3HOYC 3HKZL 2VUMK 3HOWK 3S1RK 4QJVB 5C4XK 2NVTK 2JA6K 1TWAC 3M4OK 3PO2C 4A3BC 2PMZL 2WAQL 1Y1VK 2JA5K 3HOVK 3S16K 1I6HK 1I6VA 4A3CC 4LLGA 2YU9C 4XSZA 4YFXA 1ZYRA 3S1QC 3S15C 5M5YK 4YG2A 2NVTC 3GTQC 4A3LC 2A6EA 3S2DK 2R7ZK 5IYBK 3HOYK 1I6HC 1WCMC 3S2HK 4MEXA 1SMYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3M4O C;  4NOI A;  3RZD C;  2JA7 K;  4A93 C;  1YNN A;  4A93 K;  4OIN A;  3GTQ K;  5IP7 C;  4A3L K;  1Y1V C;  2JA5 C;  1I3Q K;  2NVY K;  4YFN A;  3PO3 C;  4OIP A;  5M5X K;  4ZH4 A;  4BXX K;  4Q4Z A;  4MEY A;  1R9T C;  2O5I A;  4XLN A;  3I4N C;  2JA6 C;  3H3V D;  5C4X C;  4Q5S A;  4GZY A;  2PA8 L;  3GTO K;  2E2J C;  4KN7 A;  3GTJ K;  4OIR A;  1TWA K;  1TWH K;  1I3Q C;  1WCM K;  4MQ9 A;  4Y7N C;  5M3M K;  4Y7N K;  4AYB D;  5M3F K;  3S17 C;  5FJ8 K;  2NVX K;  5C3E K;  1SFO K;  5C44 K;  4C3I K;  3S15 K;  3GTG K;  1K83 K;  1K83 C;  1XPP A;  3PO3 K;  4QJV A;  5FLM C;  5TMC A;  2R93 C;  3M3Y C;  3FKI K;  4LJZ A;  2WB1 L;  3M3Y K;  2R93 K;  2PA8 D;  1Y1W C;  3HKZ D;  2E2I C;  4G7H A;  1Y1W K;  1IW7 A;  1TWC K;  1TWH C;  4A3M K;  3GTJ C;  2O5J A;  3GTP K;  3HOZ C;  3HOZ K;  2B63 C;  1R9T K;  3I4N K;  1SFO C;  2JA8 K;  2YU9 K;  3I4M C;  4C3J C;  3HOU K;  2E2J K;  3GTO C;  2CW0 A;  4A3F C;  3FKI C;  4A3K K;  1BDF A;  3S1M K;  5IP9 K;  5D4D A;  4G7Z A;  4A3C K;  4A3M C;  5C3E C;  4G7O A;  3S14 K;  3HOV C;  2JA7 C;  2NVQ C;  2PMZ D;  3HOU C;  5IYD C;  2A6H A;  2WAQ D;  4BY1 C;  4C3I C;  4LK0 A;  2NVY C;  3H3V L;  3S1N C;  2R92 C;  3S1N K;  4A3K C;  3S1Q K;  2R7Z C;  2WB1 D;  3K7A K;  3K7A C;  3I4M K;  3S2D C;  4YFK A;  1TWF C;  3HOX K;  4A3B K;  3WOD A;  4BBR C;  1I50 K;  5IP9 C;  2NVQ K;  5IYD K;  5IP7 K;  1TWG C;  4OIQ A;  4KN4 A;  5TMF A;  2A69 A;  4C3J K;  4XLP A;  3GTK K;  4BY1 K;  3GTG C;  4X6A K;  4A3D K;  1TWF K;  4Y52 C;  5IYC K;  5IYB C;  5FLM K;  4A3F K;  2E2H K;  3S1R C;  3GTM C;  5C4J K;  3S1M C;  3H0G C;  3HOX C;  3GTL C;  4BY7 C;  4LK1 A;  1YNJ A;  4C3H K;  2E2I K;  2A68 A;  3GTL K;  4A3I K;  1HQM A;  3RZO C;  4OIO A;  4C2M C;  3S14 C;  3S17 K;  3GTP C;  2VUM C;  2PPB A;  2BE5 A;  3DXJ A;  3HOW C;  3CQZ C;  3S16 C;  4A3G C;  2R92 K;  4Y52 K;  4BXX C;  2B63 K;  4A3J K;  4A3J C;  3GTK C;  3EQL A;  2E2H C;  5C44 C;  4AYB L;  5IYC C;  4X6A C;  1TWC C;  4A3I C;  3PO2 K;  4QIW L;  4BBS C;  4BBS K;  1I50 C;  4XSX A;  3H0G K;  4BBR K;  4A3G K;  3S2H C;  4BY7 K;  3CQZ K;  5C4J C;  3GTM K;  3RZD K;  1TWG K;  4QIW D;  2Y0S D;  2NVX C;  4A3E C;  4A3E K;  4C2M K;  3RZO K;  4KMU A;  4C3H C;  2JA8 C;  5M5W K;  4A3D C;  4JK1 A;  2Y0S L;  3HOY C;  3HKZ L;  2VUM K;  3HOW K;  3S1R K;  4QJV B;  5C4X K;  2NVT K;  2JA6 K;  1TWA C;  3M4O K;  3PO2 C;  4A3B C;  2PMZ L;  2WAQ L;  1Y1V K;  2JA5 K;  3HOV K;  3S16 K;  1I6H K;  1I6V A;  4A3C C;  4LLG A;  2YU9 C;  4XSZ A;  4YFX A;  1ZYR A;  3S1Q C;  3S15 C;  5M5Y K;  4YG2 A;  2NVT C;  3GTQ C;  4A3L C;  2A6E A;  3S2D K;  2R7Z K;  5IYB K;  3HOY K;  1I6H C;  1WCM C;  3S2H K;  4MEX A;  1SMY A; 
#chains in the Genus database with same CATH topology
 1TWG A;  3RZD C;  2JA7 K;  4A93 C;  1YNN A;  4OIN A;  1O27 A;  3GIR A;  3A8I A;  3I4N C;  2O5I A;  3TFH A;  4XLN A;  4GZY A;  1WOP A;  3GTL A;  4KN7 A;  2KPU A;  3OEP A;  5L46 A;  1TWA K;  4WIL A;  3S17 C;  5FJ8 K;  1WOO A;  2NVX K;  1XXA A;  3GTK A;  1SFO K;  5C44 K;  3S15 K;  1WQH A;  1WSR A;  1WIH A;  5E68 A;  2KXY A;  4LJZ A;  2WB1 L;  1Y1W K;  2E2I C;  1TWC K;  3GTJ C;  3HOZ C;  3HOZ K;  4GTA A;  4ILD A;  2NVX A;  1R9T K;  3ADA C;  4C3J C;  2L5N A;  5JVH S;  3GTO C;  4WJ4 A;  5HQH A;  1F7U A;  3S14 K;  2NVQ C;  1I3Q A;  1PJ6 A;  5IYD C;  2A6H A;  2WAQ D;  4C3I C;  4LK0 A;  2NVY C;  3MML B;  3S1N C;  3S1Q K;  2WB1 D;  3LAP A;  2V6S A;  4FZB A;  4WFN S;  4BBR C;  5IP9 C;  2GAG C;  1Y1W A;  4KN4 A;  1J6W A;  4G0U A;  3T00 A;  1IL2 A;  3GTG C;  2KWA A;  1TWF K;  4Y52 C;  4A3F K;  3AD7 C;  2CFA B;  3AQP A;  1SFO A;  4U67 S;  3H0G C;  4BY7 C;  2GSU A;  4LK1 A;  4GTC A;  4A3I K;  3RZO C;  4OIO A;  3DXJ A;  1XZQ B;  4BXX C;  3EQL A;  1JQW A;  3QX3 A;  5HL8 A;  5IYC C;  4X6A C;  2P5M A;  1EH1 A;  1EFW A;  3H0G K;  4BY7 K;  3CQZ K;  3RZD K;  1TWG K;  2NVX C;  3RZO K;  4A3E C;  3T01 A;  3HOY C;  3HKZ L;  4GT9 A;  1VRQ C;  1UV7 A;  1HI9 A;  1JVI A;  1ZBS A;  3HOV K;  1BS2 A;  1Y1V K;  4C45 A;  1I6H K;  2YU9 C;  4YFX A;  3S1Q C;  3S15 C;  3L4K A;  3DLL S;  4A3L C;  2VUM A;  5CHP A;  2KQ1 A;  1O24 A;  3HOY K;  1IE0 A;  1PJ7 A;  4A3M C;  1EI6 A;  1TWF A;  4NOI A;  1TWC A;  1WSV A;  3GTQ K;  3S0X A;  5IP7 C;  3GTG A;  1WQG A;  2NVY K;  4YFN A;  4ZH4 A;  3Q3Q A;  4KAT A;  2EBB A;  1R9T C;  5C4X C;  1VH2 A;  3H3V D;  3GTO K;  5JVG S;  1WOS A;  2V6U A;  1TWH K;  2L3U A;  4Y7N C;  5M3M K;  2ZJP S;  1TWA A;  3G4A A;  3GTG K;  3A8J A;  1K83 K;  1K83 C;  3CQZ A;  3PO3 K;  1ZVU A;  5TMC A;  2R93 C;  3FKI K;  4IO9 S;  2RGR A;  3JST A;  4O2D A;  3HKZ D;  1TWH C;  3LPX A;  3I4N K;  1RU0 A;  2JA8 K;  4KB2 A;  1DCH A;  3S1M K;  1ZQ1 C;  5D4D A;  4G7Z A;  1YX2 A;  5JVO A;  5IOS A;  4A3C K;  2JA6 A;  5C3E C;  1O2F B;  1B4B A;  4BLA A;  2JA7 C;  2XCR B;  3G4C A;  1INN A;  2FQT A;  2R7Z C;  1O26 A;  3GTQ A;  3K7A K;  3I4M K;  3S2D C;  2JH3 A;  4LQY A;  1TWF C;  3HOX K;  4WF9 S;  4IOC S;  5JFE A;  4OIQ A;  5TMF A;  2XCQ A;  2A69 A;  2Y3P A;  2JA5 A;  2GAH C;  5IYB C;  2V6T A;  3GTM C;  4KMA A;  3A8K A;  3FKI A;  1XZQ A;  3S14 C;  3S17 K;  3GTP C;  3HOW C;  2BE5 A;  3S16 C;  1USM A;  3CQZ C;  1GE9 A;  2B63 K;  4A3J C;  2R93 A;  2D6F C;  2E2H C;  3FHZ A;  3LYW A;  4A3I C;  1F93 A;  1TWH A;  4QIW L;  4G0W A;  4BBS K;  2ZFZ A;  1I50 C;  4A3G K;  4KMD A;  4KMU A;  1DD5 A;  4DDQ A;  2B63 A;  2ZUE A;  1XXB A;  5C4X K;  2NVT K;  2JA6 K;  4GFQ A;  3GSI A;  3CF5 S;  3L4J A;  3M4O K;  2PMZ L;  4PAA A;  2JA5 K;  2W7V A;  1I6V A;  4LLG A;  1USO A;  3AH5 A;  2R7Z A;  3GTQ C;  2E2I A;  2R92 A;  3GTJ A;  1I6H C;  4MEX A;  3M4O C;  3ERE D;  4A93 K;  4A3L K;  3GTO A;  2JA5 C;  5M5X K;  4OIP A;  4BXX K;  4Q4Z A;  4MEY A;  4GTD A;  3TFI A;  2PA8 L;  3GTM A;  4KDD A;  2E2J C;  3GTJ K;  4OIR A;  1I3Q C;  1WCM K;  4MQ9 A;  5M3F K;  4AYB D;  5IOT A;  1L0W A;  5C3E K;  2E2H A;  1XPP A;  4QJV A;  3CAG A;  4FM9 A;  3M3Y K;  3M3Y C;  3OPF A;  1Y1W C;  3GDZ A;  1IW7 A;  4A3M K;  1DCP A;  3BP8 C;  1ISE A;  3GTP K;  2B63 C;  1WCM C;  1SFO C;  1O2A A;  1XZP A;  3H0G A;  3HOU K;  2CW0 A;  1V5V A;  3PIO S;  1EK8 A;  5IP9 K;  1O25 A;  4KM8 A;  1WOR A;  3HOV C;  2PMZ D;  4WCE S;  3S1N K;  2R92 C;  4A3K C;  1XXC A;  4M1X A;  4A3B K;  1I50 K;  4KAW X;  1Y1V A;  3BP3 A;  4X6A K;  4KM9 A;  5IYC K;  2ZUF A;  5FLM K;  2E2H K;  5C4J K;  3S1M C;  1YNJ A;  4J3N A;  4C3H K;  1HQM A;  4C2M C;  2VUM C;  2PPB A;  4A3G C;  3NUH A;  1YCL A;  5EGE A;  4BKW A;  2NVY A;  1TWC C;  3TTG A;  4KAR A;  3LAJ A;  3S2H C;  1EQR A;  5C4J C;  1FEU A;  4LR2 A;  4QIW D;  1J98 A;  4A3E K;  1R9T A;  1PJ5 A;  4C2M K;  1F7V A;  4C3H C;  4A3D C;  1J6V A;  2Y0S L;  2VUM K;  4IOA S;  3S1R K;  4QJV B;  4P5B A;  1TWA C;  3SZY A;  4GTL A;  1VLO A;  4KB4 A;  1K83 A;  3S16 K;  4A3C C;  5M5Y K;  1C0A A;  3VA7 A;  2NVT C;  4KMH A;  2PHC B;  2R7Z K;  4LOW A;  1IQ0 A;  5IYB K;  3PIP S;  1X31 C;  5DM6 S;  1SMY A;  3SZZ A;  1G51 A;  1Y1V C;  4BLB A;  3PO3 C;  5EGH A;  2YU9 K;  3IPJ A;  2JA6 C;  2GSN A;  4Q5S A;  3AQO A;  4PAB A;  4Y7N K;  4KC6 A;  4C3I K;  3N0C A;  5FLM C;  2YU9 A;  2R93 K;  2PA8 D;  3HXA A;  4G7H A;  5IOR A;  1AB4 A;  2O5J A;  5CJ9 A;  3ORE A;  2ZJQ S;  3I4M C;  2E2J K;  1F9N A;  4A3F C;  3FKI C;  4A3K K;  1BDF A;  4G7O A;  3N3Y A;  1DCO A;  1KQ4 A;  4GTE A;  4WFA S;  3HOU C;  4BY1 C;  3H3V L;  1ZXO A;  1O29 A;  3BUE A;  1I50 A;  3AD8 C;  3V4G A;  4WJ3 M;  3K7A C;  1VGX A;  4YFK A;  2GSO A;  3WOD A;  1WCM A;  2NVQ K;  5IYD K;  1B4A A;  5IP7 K;  1TWG C;  2XCO A;  4C3J K;  4XLP A;  3GTK K;  4BY1 K;  4G0V A;  4A3D K;  1BJT A;  5DM7 S;  3S1R C;  4GTB A;  3HOX C;  3GTL C;  1J6X A;  3GTL K;  2E2I K;  2A68 A;  1O28 A;  4RMF A;  2R92 K;  4Y52 K;  4A3J K;  3GTK C;  2RH6 A;  5C44 C;  4WFB S;  2JA7 A;  2ZJR S;  4AYB L;  1JOE A;  3GEH A;  2CFA A;  5TJ3 A;  3PO2 K;  4BBS C;  3TFJ A;  4BBR K;  4XSX A;  4AH6 A;  3GTM K;  2Y0S D;  5M5W K;  2JA8 C;  4JK1 A;  2FQO A;  1BGW A;  3HOW K;  4KAS A;  4GTF A;  1IS1 A;  3N0B A;  3T02 A;  4P5A A;  3PO2 C;  4A3B C;  5IOQ A;  3GEE A;  2WAQ L;  1O2B A;  4XCH A;  1VJE A;  5HL7 S;  2P8T A;  4XSZ A;  1ZYR A;  3FOE A;  4YG2 A;  3FOF A;  4P9S A;  3GTP A;  2A6E A;  3S2D K;  3AD9 C;  1WQF A;  3GEI A;  1I3Q K;  3S2H K;  1IBA A;  1XZP B; 
#chains in the Genus database with same CATH homology
 3M4O C;  4NOI A;  3RZD C;  2JA7 K;  4A93 C;  1YNN A;  4A93 K;  4OIN A;  3GTQ K;  5IP7 C;  4A3L K;  1Y1V C;  2JA5 C;  1I3Q K;  2NVY K;  4YFN A;  3PO3 C;  4OIP A;  5M5X K;  4ZH4 A;  4BXX K;  4Q4Z A;  4MEY A;  1R9T C;  2O5I A;  4XLN A;  3I4N C;  2JA6 C;  3H3V D;  5C4X C;  4Q5S A;  4GZY A;  2PA8 L;  3GTO K;  2E2J C;  4KN7 A;  3GTJ K;  4OIR A;  1TWA K;  1TWH K;  1I3Q C;  1WCM K;  4MQ9 A;  4Y7N C;  5M3M K;  4Y7N K;  4AYB D;  5M3F K;  3S17 C;  5FJ8 K;  2NVX K;  5C3E K;  1SFO K;  5C44 K;  4C3I K;  3S15 K;  3GTG K;  1K83 K;  1K83 C;  1XPP A;  3PO3 K;  4QJV A;  5FLM C;  5TMC A;  2R93 C;  3M3Y C;  3FKI K;  4LJZ A;  2WB1 L;  3M3Y K;  2R93 K;  2PA8 D;  1Y1W C;  3HKZ D;  2E2I C;  4G7H A;  1Y1W K;  1IW7 A;  1TWC K;  1TWH C;  4A3M K;  3GTJ C;  2O5J A;  3GTP K;  3HOZ C;  3HOZ K;  2B63 C;  1R9T K;  3I4N K;  1SFO C;  2JA8 K;  2YU9 K;  3I4M C;  4C3J C;  3HOU K;  2E2J K;  3GTO C;  2CW0 A;  4A3F C;  3FKI C;  4A3K K;  1BDF A;  3S1M K;  5IP9 K;  5D4D A;  4G7Z A;  4A3C K;  4A3M C;  5C3E C;  4G7O A;  3S14 K;  3HOV C;  2JA7 C;  2NVQ C;  2PMZ D;  3HOU C;  5IYD C;  2A6H A;  2WAQ D;  4BY1 C;  4C3I C;  4LK0 A;  2NVY C;  3H3V L;  3S1N C;  2R92 C;  3S1N K;  4A3K C;  3S1Q K;  2R7Z C;  2WB1 D;  3K7A K;  3K7A C;  3I4M K;  3S2D C;  4YFK A;  1TWF C;  3HOX K;  4A3B K;  3WOD A;  4BBR C;  1I50 K;  5IP9 C;  2NVQ K;  5IYD K;  5IP7 K;  1TWG C;  4OIQ A;  4KN4 A;  5TMF A;  2A69 A;  4C3J K;  4XLP A;  3GTK K;  4BY1 K;  3GTG C;  4X6A K;  4A3D K;  1TWF K;  4Y52 C;  5IYC K;  5IYB C;  5FLM K;  4A3F K;  2E2H K;  3S1R C;  3GTM C;  5C4J K;  3S1M C;  3H0G C;  3HOX C;  3GTL C;  4BY7 C;  4LK1 A;  1YNJ A;  4C3H K;  2E2I K;  2A68 A;  3GTL K;  4A3I K;  1HQM A;  3RZO C;  4OIO A;  4C2M C;  3S14 C;  3S17 K;  3GTP C;  2VUM C;  2PPB A;  2BE5 A;  3DXJ A;  3HOW C;  3CQZ C;  3S16 C;  4A3G C;  2R92 K;  4Y52 K;  4BXX C;  2B63 K;  4A3J K;  4A3J C;  3GTK C;  3EQL A;  2E2H C;  5C44 C;  4AYB L;  5IYC C;  4X6A C;  1TWC C;  4A3I C;  3PO2 K;  4QIW L;  4BBS C;  4BBS K;  1I50 C;  4XSX A;  3H0G K;  4BBR K;  4A3G K;  3S2H C;  4BY7 K;  3CQZ K;  5C4J C;  3GTM K;  3RZD K;  1TWG K;  4QIW D;  2Y0S D;  2NVX C;  4A3E C;  4A3E K;  4C2M K;  3RZO K;  4KMU A;  4C3H C;  2JA8 C;  5M5W K;  4A3D C;  4JK1 A;  2Y0S L;  3HOY C;  3HKZ L;  2VUM K;  3HOW K;  3S1R K;  4QJV B;  5C4X K;  2NVT K;  2JA6 K;  1TWA C;  3M4O K;  3PO2 C;  4A3B C;  2PMZ L;  2WAQ L;  1Y1V K;  2JA5 K;  3HOV K;  3S16 K;  1I6H K;  1I6V A;  4A3C C;  4LLG A;  2YU9 C;  4XSZ A;  4YFX A;  1ZYR A;  3S1Q C;  3S15 C;  5M5Y K;  4YG2 A;  2NVT C;  3GTQ C;  4A3L C;  2A6E A;  3S2D K;  2R7Z K;  5IYB K;  3HOY K;  1I6H C;  1WCM C;  3S2H K;  4MEX A;  1SMY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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