5C4JC

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
265
structure length
265
Chain Sequence
EGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
total genus 45
structure length 265
sequence length 265
ec nomenclature
pdb deposition date 2015-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5c4jC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5c4jC01
3K7AK 3H3VL 4A3GK 3M3YC 2JA8K 2YU9C 3S17C 1TWFK 3GTJC 3HOXC 1Y1VK 5C44C 1TWAK 4Y7NK 4NOIA 3S1MK 4A3BK 3HOVC 2E2HC 2JA7C 2PA8D 4OIQA 3HKZL 5M3FK 4BY7K 2WAQL 1YNJA 4OIOA 3I4NC 3S2DK 4G7HA 4BXXK 3WODA 2NVXK 4X6AK 3S2HK 1I50K 2PPBA 5C4XC 3PO2K 2R92K 3PO3K 2JA6C 4A3JK 4A3IK 3GTGK 1I6VA 1K83C 3S1RK 1I3QC 3FKIK 4A3KK 4KN4A 5FLMC 4Q5SA 3S15C 3HOZC 4G7OA 4YFNA 2A6HA 4C3HC 2R7ZC 4A3DK 3M3YK 3DXJA 4A93C 1XPPA 4QIWL 1TWHC 5D4DA 4A3LC 3M4OC 2YU9K 3S14C 3S17K 5IYDC 3GTJK 3HOXK 2WB1D 4XLNA 5C3EC 1SFOC 5C44K 3HOVK 4A3EC 4A3CC 2JA7K 2A6EA 4XLPA 3RZDC 2NVQC 4JK1A 2A68A 4YFKA 4AYBD 2NVYC 5IYCC 3S1NC 1Y1WC 5M3MK 5C4XK 5TMFA 5IP9C 4KMUA 2BE5A 5C4JC 1TWCC 2JA6K 3I4MC 2PA8L 1K83K 1I3QK 4OIPA 5IP7C 3HOYC 3S15K 3HOZK 2R7ZK 4C3HK 1I6HC 4C3JC 4A93K 2A69A 4Q4ZA 1TWHK 3M4OK 4A3LK 3HOWK 1R9TC 3S14K 2Y0SD 5IYDK 4C3IC 3HOUC 4A3MC 3GTQC 5C3EK 1SFOK 2PMZD 4A3EK 4A3CK 4MQ9A 3GTLC 3RZDK 2E2JC 2NVQK 3EQLA 3GTKC 3GTPC 4Y52C 3GTOC 2NVYK 2E2HK 3S1NK 4XSZA 2WB1L 5M5WK 1Y1WK 5IP9K 2O5JA 4OINA 1TWCK 1WCMC 5C4JK 4BY1C 4A3BC 2E2IC 3I4NK 4A3FC 4BY7C 1TWGC 4G7ZA 2VUMC 4BBSC 4BBRC 5IP7K 1HQMA 2R93C 4OIRA 3HOYK 1IW7A 4QJVB 2B63C 5FJ8K 1I6HK 4C3JK 4QJVA 4LJZA 4YG2A 1R9TK 5FLMK 4C3IK 3S16C 3S1QC 4A3MK 3RZOC 3GTQK 3HOUK 4C2MC 2JA5C 5M5XK 3H3VD 3GTLK 1ZYRA 3HOWC 2E2JK 4A3DC 4KN7A 1BDFA 4ZH4A 3CQZC 5IYBC 3GTMC 3H0GC 2Y0SL 3GTPK 3GTOK 3GTKK 4Y52K 2NVTC 4LLGA 2CW0A 2PMZL 3K7AC 4MEYA 4YFXA 4GZYA 1WCMK 4BY1K 3HKZD 4LK1A 2E2IK 5TMCA 4A3GC 2JA8C 1TWGK 5IYCK 4A3FK 2WAQD 2O5IA 4BBRK 2VUMK 4BBSK 2R93K 1TWFC 4LK0A 1Y1VC 4XSXA 1TWAC 4Y7NC 3S1MC 2B63K 3I4MK 2NVTK 4AYBL 3S16K 3S1QK 3RZOK 4C2MK 2JA5K 3S2DC 4MEXA 4BXXC 4X6AC 2NVXC 3S2HC 1I50C 3PO2C 3PO3C 2R92C 4QIWD 1YNNA 4A3JC 3GTGC 4A3IC 1SMYA 5M5YK 3CQZK 5IYBK 3GTMK 3H0GK 3S1RC 4A3KC 3FKIC
chains in the Genus database with same CATH superfamily
1DCPA 2EBBA 2B63A 1EQRA 2GSUA 2RGRA 3LPXA 3L4JA 1Y1VK 3VA7A 3HOVC 2PA8D 3HKZL 5M3FK 2WAQL 2P8TA 4WFAS 3AQOA 3I4NC 4G7HA 1X31C 3PO2K 3PO3K 1F9NA 4KATA 2JA6C 3GTGK 1XZPA 3SZYA 3S1RK 1I3QC 4KN4A 1Y1VA 5IOQA 4G7OA 2R7ZC 3DXJA 4QIWL 1TWHC 5D4DA 3M4OC 4WCES 2WB1D 4XLNA 3HOVK 2A68A 4AYBD 3S1NC 1Y1WC 2V6TA 2JA6K 3SZZA 1I3QK 1XZQB 2R7ZK 1XZQA 1TWHK 3M4OK 2Y0SD 4C3IC 4A3MC 1IE0A 1BJTA 3GTLC 2FQOA 2JA6A 1I3QA 5EGEA 1DD5A 3ERED 3S1NK 4XSZA 3S0XA 5M5WK 1Y1WK 2O5JA 4OINA 2R7ZA 1WCMC 1TWHA 4BY7C 1O28A 4RMFA 4BBRC 4OIRA 1J6VA 4QJVB 4QJVA 4YG2A 1HI9A 4C3IK 4A3MK 3BUEA 4GTCA 2JA5C 1J6XA 1Y1WA 3GTLK 2D6FC 5JVHS 3LAJA 3GTMC 4P5AA 5IOSA 1WCMK 1O26A 4LK1A 2ZJQS 4BY7K 2O5IA 4BBRK 3FHZA 1TWFC 1TWAC 4IOAS 3GTLA 1JQWA 1WQFA 5HL8A 3A8KA 2KWAA 4IOCS 2ZJRS 3Q3QA 2JA5K 4BXXC 4MEXA 3S2HC 2R92C 1WCMA 1SMYA 3GTMK 2PHCB 3CF5S 1JOEA 5HQHA 5HL7S 4KB2A 3H3VL 3ADAC 3JSTA 3M3YC 1TWFK 1TWAK 5E68A 2JA5A 2V6UA 4WILA 4OIQA 3IPJA 4GTAA 2W7VA 3GTMA 4OIOA 4C45A 3OREA 4BXXK 4GFQA 3S2HK 2XCOA 5C4XC 3GTJA 2R92K 1PJ7A 3TFIA 1K83C 1FEUA 1TWFA 3LYWA 3S15C 1TWAA 3M3YK 1O29A 5IYDC 4U67S 5C3EC 1SFOC 1GE9A 2R92A 3RZDC 4BLAA 3AH5A 2NVYC 5IYCC 4KC6A 5M3MK 5C4XK 3AD9C 2BE5A 3I4MC 4LR2A 2PA8L 1K83K 4OIPA 1YX2A 1XZPB 3S15K 2JH3A 2Y3PA 4GTLA 1R9TC 5IYDK 1TWCA 5C3EK 1SFOK 4KMDA 1VJEA 2PMZD 5L46A 3RZDK 2KXYA 4WFBS 1K83A 1PJ6A 2NVYK 3N0BA 2WB1L 3GEHA 2ZUEA 4A3BC 3I4NK 4A3FC 5IORA 4PAAA 1SFOA 1IW7A 2CFAB 5FJ8K 2CFAA 1INNA 4LJZA 5JVOA 1R9TK 5JVGS 1EK8A 3S16C 2E2IA 2NVYA 4C2MC 4G0WA 2ZUFA 4KN7A 3AD8C 5EGHA 1F7UA 4ZH4A 2Y0SL 1IS1A 2NVTC 1YCLA 4MEYA 3N0CA 4A3FK 2JA8C 1WSRA 1R9TA 2ZFZA 1BGWA 3TTGA 4LK0A 3CQZA 3OPFA 5CJ9A 1VRQC 4GT9A 5JFEA 3S16K 4C2MK 1DCOA 2NVXC 3T01A 1I50C 4KARA 3GDZA 1YNNA 4A3JC 4KM8A 4BKWA 3LAPA 4A3KC 3FKIC 2NVTK 1O2BA 4KM9A 3G4AA 1KQ4A 2JA8K 4KMHA 4KASA 3S17C 1IBAA 1ISEA 3GTJC 3HOXC 5C44C 1V5VA 4XCHA 2E2HC 1B4AA 1J98A 1WOOA 1L0WA 2YU9A 2NVXK 1I50K 2PPBA 4PABA 4A3JK 1IL2A 4A3KK 1O2AA 3FKIK 5FLMC 4Q5SA 2GAGC 4LOWA 3G4CA 3HOZC 4YFNA 5DM6S 1XPPA 4A3LC 3S17K 2GAHC 3S14C 3GTJK 3HOXK 5C44K 1PJ5A 4LQYA 2NVXA 1G51A 4G0UA 1I50A 2A6EA 1ZXOA 4GTDA 1EFWA 4JK1A 3FKIA 4WJ3M 5TMFA 1AB4A 4KMUA 5C4JC 1TWCC 4P5BA 1WQGA 1USOA 4KB4A 3HOZK 3TFHA 1I6HC 2E2HA 4Q4ZA 4A3LK 3S14K 4BLBA 3GTQC 4MQ9A 2FQTA 3GTKC 3GTPC 3HXAA 5C4JK 1TWCK 4BY1C 1BS2A 2E2IC 1B4BA 3PIPS 4G7ZA 2VUMC 1C0AA 2R93C 1WIHA 3BP3A 1I6HK 1EH1A 4WFNS 4KMAA 3GTQK 1XXAA 1TWGA 3HOWC 2L3UA 4A3DC 1BDFA 2ZJPS 1XXBA 3T02A 3GTKK 3CQZC 5IYBC 3GTPK 3H0GC 4G0VA 4ILDA 4KDDA 4LLGA 2PMZL 3K7AC 3TFJA 4BY1K 3HKZD 2E2IK 4A3GC 4AH6A 5IYCK 2KQ1A 2WAQD 4DDQA 2VUMK 2R93K 1USMA 3GTQA 1VLOA 4XSXA 3S1MC 4Y7NC 3I4MK 4AYBL 3GSIA 3GTKA 3GTPA 3AD7C 3S2DC 4X6AC 3HOWK 4QIWD 4A3DK 1EI6A 4A3IC 5M5YK 3CQZK 5IYBK 3H0GK 2VUMA 1F93A 4KAWX 2R93A 1ZBSA 3K7AK 1IQ0A 2L5NA 4A3GK 2YU9C 5CHPA 2V6SA 3QX3A 3GTGA 1VGXA 4GTBA 3N3YA 4M1XA 3AQPA 4Y7NK 4NOIA 3S1MK 4A3BK 2JA7C 1O2FB 1F7VA 1J6WA 4WF9S 1YNJA 3H0GA 3S2DK 3WODA 4X6AK 4IO9S 4A3IK 1I6VA 3CAGA 1WSVA 2A6HA 4C3HC 3BP8C 4A93C 2YU9K 1DCHA 1RU0A 3DLLS 2GSNA 1XXCA 4J3NA 5DM7S 2RH6A 4A3EC 4A3CC 4O2DA 2JA7K 2XCRB 1O25A 4XLPA 2NVQC 4YFKA 1O27A 1O24A 5IP9C 5IP7C 1WOPA 2GSOA 5IOTA 3A8IA 3HOYC 4FZBA 3A8JA 4C3HK 4A93K 4C3JC 2JA7A 2A69A 3MMLB 4P9SA 2KPUA 3FOEA 3HOUC 4A3EK 4GTEA 4A3CK 3PIOS 2E2JC 2NVQK 3EQLA 3NUHA 4Y52C 3GTOC 3FOFA 2E2HK 3GEEA 1WQHA 5IP9K 2P5MA 2XCQA 1TWGC 4BBSC 5IP7K 1HQMA 3HOYK 1JVIA 5TJ3A 3GEIA 2B63C 1WORA 4C3JK 5FLMK 3S1QC 3HOUK 3RZOC 1VH2A 5M5XK 3H3VD 3V4GA 1ZYRA 2E2JK 3L4KA 3GTOK 3GIRA 4Y52K 2CW0A 1UV7A 4YFXA 4GZYA 5TMCA 1TWGK 4BBSK 1Y1VC 2B63K 3T00A 3S1QK 3RZOK 4WJ4A 1ZVUA 3GTOA 3OEPA 3PO2C 3PO3C 4FM9A 3GTGC 1ZQ1C 4GTFA 3S1RC 1WOSA
chains in the Genus database with same CATH topology
3K7AK 3H3VL 4A3GK 3M3YC 2JA8K 2YU9C 3S17C 1TWFK 3GTJC 3HOXC 1Y1VK 5C44C 1TWAK 4Y7NK 4NOIA 3S1MK 4A3BK 3HOVC 2E2HC 2JA7C 2PA8D 4OIQA 3HKZL 5M3FK 4BY7K 2WAQL 1YNJA 4OIOA 3I4NC 3S2DK 4G7HA 4BXXK 3WODA 2NVXK 4X6AK 3S2HK 1I50K 2PPBA 5C4XC 3PO2K 2R92K 3PO3K 2JA6C 4A3JK 4A3IK 3GTGK 1I6VA 1K83C 3S1RK 1I3QC 3FKIK 4A3KK 4KN4A 5FLMC 4Q5SA 3S15C 3HOZC 4G7OA 4YFNA 2A6HA 4C3HC 2R7ZC 4A3DK 3M3YK 3DXJA 4A93C 1XPPA 4QIWL 1TWHC 5D4DA 4A3LC 3M4OC 2YU9K 3S14C 3S17K 5IYDC 3GTJK 3HOXK 2WB1D 4XLNA 5C3EC 1SFOC 5C44K 3HOVK 4A3EC 4A3CC 2JA7K 2A6EA 4XLPA 3RZDC 2NVQC 4JK1A 2A68A 4YFKA 4AYBD 2NVYC 5IYCC 3S1NC 1Y1WC 5M3MK 5C4XK 5TMFA 5IP9C 4KMUA 2BE5A 5C4JC 1TWCC 2JA6K 3I4MC 2PA8L 1K83K 1I3QK 4OIPA 5IP7C 3HOYC 3S15K 3HOZK 2R7ZK 4C3HK 1I6HC 4C3JC 4A93K 2A69A 4Q4ZA 1TWHK 3M4OK 4A3LK 3HOWK 1R9TC 3S14K 2Y0SD 5IYDK 4C3IC 3HOUC 4A3MC 3GTQC 5C3EK 1SFOK 2PMZD 4A3EK 4A3CK 4MQ9A 3GTLC 3RZDK 2E2JC 2NVQK 3EQLA 3GTKC 3GTPC 4Y52C 3GTOC 2NVYK 2E2HK 3S1NK 4XSZA 2WB1L 5M5WK 1Y1WK 5IP9K 2O5JA 4OINA 1TWCK 1WCMC 5C4JK 4BY1C 4A3BC 2E2IC 3I4NK 4A3FC 4BY7C 1TWGC 4G7ZA 2VUMC 4BBSC 4BBRC 5IP7K 1HQMA 2R93C 4OIRA 3HOYK 1IW7A 4QJVB 2B63C 5FJ8K 1I6HK 4C3JK 4QJVA 4LJZA 4YG2A 1R9TK 5FLMK 4C3IK 3S16C 3S1QC 4A3MK 3RZOC 3GTQK 3HOUK 4C2MC 2JA5C 5M5XK 3H3VD 3GTLK 1ZYRA 3HOWC 2E2JK 4A3DC 4KN7A 1BDFA 4ZH4A 3CQZC 5IYBC 3GTMC 3H0GC 2Y0SL 3GTPK 3GTOK 3GTKK 4Y52K 2NVTC 4LLGA 2CW0A 2PMZL 3K7AC 4MEYA 4YFXA 4GZYA 1WCMK 4BY1K 3HKZD 4LK1A 2E2IK 5TMCA 4A3GC 2JA8C 1TWGK 5IYCK 4A3FK 2WAQD 2O5IA 4BBRK 2VUMK 4BBSK 2R93K 1TWFC 4LK0A 1Y1VC 4XSXA 1TWAC 4Y7NC 3S1MC 2B63K 3I4MK 2NVTK 4AYBL 3S16K 3S1QK 3RZOK 4C2MK 2JA5K 3S2DC 4MEXA 4BXXC 4X6AC 2NVXC 3S2HC 1I50C 3PO2C 3PO3C 2R92C 4QIWD 1YNNA 4A3JC 3GTGC 4A3IC 1SMYA 5M5YK 3CQZK 5IYBK 3GTMK 3H0GK 3S1RC 4A3KC 3FKIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K7A K;  3H3V L;  4A3G K;  3M3Y C;  2JA8 K;  2YU9 C;  3S17 C;  1TWF K;  3GTJ C;  3HOX C;  1Y1V K;  5C44 C;  1TWA K;  4Y7N K;  4NOI A;  3S1M K;  4A3B K;  3HOV C;  2E2H C;  2JA7 C;  2PA8 D;  4OIQ A;  3HKZ L;  5M3F K;  4BY7 K;  2WAQ L;  1YNJ A;  4OIO A;  3I4N C;  3S2D K;  4G7H A;  4BXX K;  3WOD A;  2NVX K;  4X6A K;  3S2H K;  1I50 K;  2PPB A;  5C4X C;  3PO2 K;  2R92 K;  3PO3 K;  2JA6 C;  4A3J K;  4A3I K;  3GTG K;  1I6V A;  1K83 C;  3S1R K;  1I3Q C;  3FKI K;  4A3K K;  4KN4 A;  5FLM C;  4Q5S A;  3S15 C;  3HOZ C;  4G7O A;  4YFN A;  2A6H A;  4C3H C;  2R7Z C;  4A3D K;  3M3Y K;  3DXJ A;  4A93 C;  1XPP A;  4QIW L;  1TWH C;  5D4D A;  4A3L C;  3M4O C;  2YU9 K;  3S14 C;  3S17 K;  5IYD C;  3GTJ K;  3HOX K;  2WB1 D;  4XLN A;  5C3E C;  1SFO C;  5C44 K;  3HOV K;  4A3E C;  4A3C C;  2JA7 K;  2A6E A;  4XLP A;  3RZD C;  2NVQ C;  4JK1 A;  2A68 A;  4YFK A;  4AYB D;  2NVY C;  5IYC C;  3S1N C;  1Y1W C;  5M3M K;  5C4X K;  5TMF A;  5IP9 C;  4KMU A;  2BE5 A;  5C4J C;  1TWC C;  2JA6 K;  3I4M C;  2PA8 L;  1K83 K;  1I3Q K;  4OIP A;  5IP7 C;  3HOY C;  3S15 K;  3HOZ K;  2R7Z K;  4C3H K;  1I6H C;  4C3J C;  4A93 K;  2A69 A;  4Q4Z A;  1TWH K;  3M4O K;  4A3L K;  3HOW K;  1R9T C;  3S14 K;  2Y0S D;  5IYD K;  4C3I C;  3HOU C;  4A3M C;  3GTQ C;  5C3E K;  1SFO K;  2PMZ D;  4A3E K;  4A3C K;  4MQ9 A;  3GTL C;  3RZD K;  2E2J C;  2NVQ K;  3EQL A;  3GTK C;  3GTP C;  4Y52 C;  3GTO C;  2NVY K;  2E2H K;  3S1N K;  4XSZ A;  2WB1 L;  5M5W K;  1Y1W K;  5IP9 K;  2O5J A;  4OIN A;  1TWC K;  1WCM C;  5C4J K;  4BY1 C;  4A3B C;  2E2I C;  3I4N K;  4A3F C;  4BY7 C;  1TWG C;  4G7Z A;  2VUM C;  4BBS C;  4BBR C;  5IP7 K;  1HQM A;  2R93 C;  4OIR A;  3HOY K;  1IW7 A;  4QJV B;  2B63 C;  5FJ8 K;  1I6H K;  4C3J K;  4QJV A;  4LJZ A;  4YG2 A;  1R9T K;  5FLM K;  4C3I K;  3S16 C;  3S1Q C;  4A3M K;  3RZO C;  3GTQ K;  3HOU K;  4C2M C;  2JA5 C;  5M5X K;  3H3V D;  3GTL K;  1ZYR A;  3HOW C;  2E2J K;  4A3D C;  4KN7 A;  1BDF A;  4ZH4 A;  3CQZ C;  5IYB C;  3GTM C;  3H0G C;  2Y0S L;  3GTP K;  3GTO K;  3GTK K;  4Y52 K;  2NVT C;  4LLG A;  2CW0 A;  2PMZ L;  3K7A C;  4MEY A;  4YFX A;  4GZY A;  1WCM K;  4BY1 K;  3HKZ D;  4LK1 A;  2E2I K;  5TMC A;  4A3G C;  2JA8 C;  1TWG K;  5IYC K;  4A3F K;  2WAQ D;  2O5I A;  4BBR K;  2VUM K;  4BBS K;  2R93 K;  1TWF C;  4LK0 A;  1Y1V C;  4XSX A;  1TWA C;  4Y7N C;  3S1M C;  2B63 K;  3I4M K;  2NVT K;  4AYB L;  3S16 K;  3S1Q K;  3RZO K;  4C2M K;  2JA5 K;  3S2D C;  4MEX A;  4BXX C;  4X6A C;  2NVX C;  3S2H C;  1I50 C;  3PO2 C;  3PO3 C;  2R92 C;  4QIW D;  1YNN A;  4A3J C;  3GTG C;  4A3I C;  1SMY A;  5M5Y K;  3CQZ K;  5IYB K;  3GTM K;  3H0G K;  3S1R C;  4A3K C;  3FKI C; 
#chains in the Genus database with same CATH topology
 1DCP A;  2EBB A;  2B63 A;  1EQR A;  2GSU A;  2RGR A;  3LPX A;  3L4J A;  1Y1V K;  3VA7 A;  3HOV C;  2PA8 D;  3HKZ L;  5M3F K;  2WAQ L;  2P8T A;  4WFA S;  3AQO A;  3I4N C;  4G7H A;  1X31 C;  3PO2 K;  3PO3 K;  1F9N A;  4KAT A;  2JA6 C;  3GTG K;  1XZP A;  3SZY A;  3S1R K;  1I3Q C;  4KN4 A;  1Y1V A;  5IOQ A;  4G7O A;  2R7Z C;  3DXJ A;  4QIW L;  1TWH C;  5D4D A;  3M4O C;  4WCE S;  2WB1 D;  4XLN A;  3HOV K;  2A68 A;  4AYB D;  3S1N C;  1Y1W C;  2V6T A;  2JA6 K;  3SZZ A;  1I3Q K;  1XZQ B;  2R7Z K;  1XZQ A;  1TWH K;  3M4O K;  2Y0S D;  4C3I C;  4A3M C;  1IE0 A;  1BJT A;  3GTL C;  2FQO A;  2JA6 A;  1I3Q A;  5EGE A;  1DD5 A;  3ERE D;  3S1N K;  4XSZ A;  3S0X A;  5M5W K;  1Y1W K;  2O5J A;  4OIN A;  2R7Z A;  1WCM C;  1TWH A;  4BY7 C;  1O28 A;  4RMF A;  4BBR C;  4OIR A;  1J6V A;  4QJV B;  4QJV A;  4YG2 A;  1HI9 A;  4C3I K;  4A3M K;  3BUE A;  4GTC A;  2JA5 C;  1J6X A;  1Y1W A;  3GTL K;  2D6F C;  5JVH S;  3LAJ A;  3GTM C;  4P5A A;  5IOS A;  1WCM K;  1O26 A;  4LK1 A;  2ZJQ S;  4BY7 K;  2O5I A;  4BBR K;  3FHZ A;  1TWF C;  1TWA C;  4IOA S;  3GTL A;  1JQW A;  1WQF A;  5HL8 A;  3A8K A;  2KWA A;  4IOC S;  2ZJR S;  3Q3Q A;  2JA5 K;  4BXX C;  4MEX A;  3S2H C;  2R92 C;  1WCM A;  1SMY A;  3GTM K;  2PHC B;  3CF5 S;  1JOE A;  5HQH A;  5HL7 S;  4KB2 A;  3H3V L;  3ADA C;  3JST A;  3M3Y C;  1TWF K;  1TWA K;  5E68 A;  2JA5 A;  2V6U A;  4WIL A;  4OIQ A;  3IPJ A;  4GTA A;  2W7V A;  3GTM A;  4OIO A;  4C45 A;  3ORE A;  4BXX K;  4GFQ A;  3S2H K;  2XCO A;  5C4X C;  3GTJ A;  2R92 K;  1PJ7 A;  3TFI A;  1K83 C;  1FEU A;  1TWF A;  3LYW A;  3S15 C;  1TWA A;  3M3Y K;  1O29 A;  5IYD C;  4U67 S;  5C3E C;  1SFO C;  1GE9 A;  2R92 A;  3RZD C;  4BLA A;  3AH5 A;  2NVY C;  5IYC C;  4KC6 A;  5M3M K;  5C4X K;  3AD9 C;  2BE5 A;  3I4M C;  4LR2 A;  2PA8 L;  1K83 K;  4OIP A;  1YX2 A;  1XZP B;  3S15 K;  2JH3 A;  2Y3P A;  4GTL A;  1R9T C;  5IYD K;  1TWC A;  5C3E K;  1SFO K;  4KMD A;  1VJE A;  2PMZ D;  5L46 A;  3RZD K;  2KXY A;  4WFB S;  1K83 A;  1PJ6 A;  2NVY K;  3N0B A;  2WB1 L;  3GEH A;  2ZUE A;  4A3B C;  3I4N K;  4A3F C;  5IOR A;  4PAA A;  1SFO A;  1IW7 A;  2CFA B;  5FJ8 K;  2CFA A;  1INN A;  4LJZ A;  5JVO A;  1R9T K;  5JVG S;  1EK8 A;  3S16 C;  2E2I A;  2NVY A;  4C2M C;  4G0W A;  2ZUF A;  4KN7 A;  3AD8 C;  5EGH A;  1F7U A;  4ZH4 A;  2Y0S L;  1IS1 A;  2NVT C;  1YCL A;  4MEY A;  3N0C A;  4A3F K;  2JA8 C;  1WSR A;  1R9T A;  2ZFZ A;  1BGW A;  3TTG A;  4LK0 A;  3CQZ A;  3OPF A;  5CJ9 A;  1VRQ C;  4GT9 A;  5JFE A;  3S16 K;  4C2M K;  1DCO A;  2NVX C;  3T01 A;  1I50 C;  4KAR A;  3GDZ A;  1YNN A;  4A3J C;  4KM8 A;  4BKW A;  3LAP A;  4A3K C;  3FKI C;  2NVT K;  1O2B A;  4KM9 A;  3G4A A;  1KQ4 A;  2JA8 K;  4KMH A;  4KAS A;  3S17 C;  1IBA A;  1ISE A;  3GTJ C;  3HOX C;  5C44 C;  1V5V A;  4XCH A;  2E2H C;  1B4A A;  1J98 A;  1WOO A;  1L0W A;  2YU9 A;  2NVX K;  1I50 K;  2PPB A;  4PAB A;  4A3J K;  1IL2 A;  4A3K K;  1O2A A;  3FKI K;  5FLM C;  4Q5S A;  2GAG C;  4LOW A;  3G4C A;  3HOZ C;  4YFN A;  5DM6 S;  1XPP A;  4A3L C;  3S17 K;  2GAH C;  3S14 C;  3GTJ K;  3HOX K;  5C44 K;  1PJ5 A;  4LQY A;  2NVX A;  1G51 A;  4G0U A;  1I50 A;  2A6E A;  1ZXO A;  4GTD A;  1EFW A;  4JK1 A;  3FKI A;  4WJ3 M;  5TMF A;  1AB4 A;  4KMU A;  5C4J C;  1TWC C;  4P5B A;  1WQG A;  1USO A;  4KB4 A;  3HOZ K;  3TFH A;  1I6H C;  2E2H A;  4Q4Z A;  4A3L K;  3S14 K;  4BLB A;  3GTQ C;  4MQ9 A;  2FQT A;  3GTK C;  3GTP C;  3HXA A;  5C4J K;  1TWC K;  4BY1 C;  1BS2 A;  2E2I C;  1B4B A;  3PIP S;  4G7Z A;  2VUM C;  1C0A A;  2R93 C;  1WIH A;  3BP3 A;  1I6H K;  1EH1 A;  4WFN S;  4KMA A;  3GTQ K;  1XXA A;  1TWG A;  3HOW C;  2L3U A;  4A3D C;  1BDF A;  2ZJP S;  1XXB A;  3T02 A;  3GTK K;  3CQZ C;  5IYB C;  3GTP K;  3H0G C;  4G0V A;  4ILD A;  4KDD A;  4LLG A;  2PMZ L;  3K7A C;  3TFJ A;  4BY1 K;  3HKZ D;  2E2I K;  4A3G C;  4AH6 A;  5IYC K;  2KQ1 A;  2WAQ D;  4DDQ A;  2VUM K;  2R93 K;  1USM A;  3GTQ A;  1VLO A;  4XSX A;  3S1M C;  4Y7N C;  3I4M K;  4AYB L;  3GSI A;  3GTK A;  3GTP A;  3AD7 C;  3S2D C;  4X6A C;  3HOW K;  4QIW D;  4A3D K;  1EI6 A;  4A3I C;  5M5Y K;  3CQZ K;  5IYB K;  3H0G K;  2VUM A;  1F93 A;  4KAW X;  2R93 A;  1ZBS A;  3K7A K;  1IQ0 A;  2L5N A;  4A3G K;  2YU9 C;  5CHP A;  2V6S A;  3QX3 A;  3GTG A;  1VGX A;  4GTB A;  3N3Y A;  4M1X A;  3AQP A;  4Y7N K;  4NOI A;  3S1M K;  4A3B K;  2JA7 C;  1O2F B;  1F7V A;  1J6W A;  4WF9 S;  1YNJ A;  3H0G A;  3S2D K;  3WOD A;  4X6A K;  4IO9 S;  4A3I K;  1I6V A;  3CAG A;  1WSV A;  2A6H A;  4C3H C;  3BP8 C;  4A93 C;  2YU9 K;  1DCH A;  1RU0 A;  3DLL S;  2GSN A;  1XXC A;  4J3N A;  5DM7 S;  2RH6 A;  4A3E C;  4A3C C;  4O2D A;  2JA7 K;  2XCR B;  1O25 A;  4XLP A;  2NVQ C;  4YFK A;  1O27 A;  1O24 A;  5IP9 C;  5IP7 C;  1WOP A;  2GSO A;  5IOT A;  3A8I A;  3HOY C;  4FZB A;  3A8J A;  4C3H K;  4A93 K;  4C3J C;  2JA7 A;  2A69 A;  3MML B;  4P9S A;  2KPU A;  3FOE A;  3HOU C;  4A3E K;  4GTE A;  4A3C K;  3PIO S;  2E2J C;  2NVQ K;  3EQL A;  3NUH A;  4Y52 C;  3GTO C;  3FOF A;  2E2H K;  3GEE A;  1WQH A;  5IP9 K;  2P5M A;  2XCQ A;  1TWG C;  4BBS C;  5IP7 K;  1HQM A;  3HOY K;  1JVI A;  5TJ3 A;  3GEI A;  2B63 C;  1WOR A;  4C3J K;  5FLM K;  3S1Q C;  3HOU K;  3RZO C;  1VH2 A;  5M5X K;  3H3V D;  3V4G A;  1ZYR A;  2E2J K;  3L4K A;  3GTO K;  3GIR A;  4Y52 K;  2CW0 A;  1UV7 A;  4YFX A;  4GZY A;  5TMC A;  1TWG K;  4BBS K;  1Y1V C;  2B63 K;  3T00 A;  3S1Q K;  3RZO K;  4WJ4 A;  1ZVU A;  3GTO A;  3OEP A;  3PO2 C;  3PO3 C;  4FM9 A;  3GTG C;  1ZQ1 C;  4GTF A;  3S1R C;  1WOS A; 
#chains in the Genus database with same CATH homology
 3K7A K;  3H3V L;  4A3G K;  3M3Y C;  2JA8 K;  2YU9 C;  3S17 C;  1TWF K;  3GTJ C;  3HOX C;  1Y1V K;  5C44 C;  1TWA K;  4Y7N K;  4NOI A;  3S1M K;  4A3B K;  3HOV C;  2E2H C;  2JA7 C;  2PA8 D;  4OIQ A;  3HKZ L;  5M3F K;  4BY7 K;  2WAQ L;  1YNJ A;  4OIO A;  3I4N C;  3S2D K;  4G7H A;  4BXX K;  3WOD A;  2NVX K;  4X6A K;  3S2H K;  1I50 K;  2PPB A;  5C4X C;  3PO2 K;  2R92 K;  3PO3 K;  2JA6 C;  4A3J K;  4A3I K;  3GTG K;  1I6V A;  1K83 C;  3S1R K;  1I3Q C;  3FKI K;  4A3K K;  4KN4 A;  5FLM C;  4Q5S A;  3S15 C;  3HOZ C;  4G7O A;  4YFN A;  2A6H A;  4C3H C;  2R7Z C;  4A3D K;  3M3Y K;  3DXJ A;  4A93 C;  1XPP A;  4QIW L;  1TWH C;  5D4D A;  4A3L C;  3M4O C;  2YU9 K;  3S14 C;  3S17 K;  5IYD C;  3GTJ K;  3HOX K;  2WB1 D;  4XLN A;  5C3E C;  1SFO C;  5C44 K;  3HOV K;  4A3E C;  4A3C C;  2JA7 K;  2A6E A;  4XLP A;  3RZD C;  2NVQ C;  4JK1 A;  2A68 A;  4YFK A;  4AYB D;  2NVY C;  5IYC C;  3S1N C;  1Y1W C;  5M3M K;  5C4X K;  5TMF A;  5IP9 C;  4KMU A;  2BE5 A;  5C4J C;  1TWC C;  2JA6 K;  3I4M C;  2PA8 L;  1K83 K;  1I3Q K;  4OIP A;  5IP7 C;  3HOY C;  3S15 K;  3HOZ K;  2R7Z K;  4C3H K;  1I6H C;  4C3J C;  4A93 K;  2A69 A;  4Q4Z A;  1TWH K;  3M4O K;  4A3L K;  3HOW K;  1R9T C;  3S14 K;  2Y0S D;  5IYD K;  4C3I C;  3HOU C;  4A3M C;  3GTQ C;  5C3E K;  1SFO K;  2PMZ D;  4A3E K;  4A3C K;  4MQ9 A;  3GTL C;  3RZD K;  2E2J C;  2NVQ K;  3EQL A;  3GTK C;  3GTP C;  4Y52 C;  3GTO C;  2NVY K;  2E2H K;  3S1N K;  4XSZ A;  2WB1 L;  5M5W K;  1Y1W K;  5IP9 K;  2O5J A;  4OIN A;  1TWC K;  1WCM C;  5C4J K;  4BY1 C;  4A3B C;  2E2I C;  3I4N K;  4A3F C;  4BY7 C;  1TWG C;  4G7Z A;  2VUM C;  4BBS C;  4BBR C;  5IP7 K;  1HQM A;  2R93 C;  4OIR A;  3HOY K;  1IW7 A;  4QJV B;  2B63 C;  5FJ8 K;  1I6H K;  4C3J K;  4QJV A;  4LJZ A;  4YG2 A;  1R9T K;  5FLM K;  4C3I K;  3S16 C;  3S1Q C;  4A3M K;  3RZO C;  3GTQ K;  3HOU K;  4C2M C;  2JA5 C;  5M5X K;  3H3V D;  3GTL K;  1ZYR A;  3HOW C;  2E2J K;  4A3D C;  4KN7 A;  1BDF A;  4ZH4 A;  3CQZ C;  5IYB C;  3GTM C;  3H0G C;  2Y0S L;  3GTP K;  3GTO K;  3GTK K;  4Y52 K;  2NVT C;  4LLG A;  2CW0 A;  2PMZ L;  3K7A C;  4MEY A;  4YFX A;  4GZY A;  1WCM K;  4BY1 K;  3HKZ D;  4LK1 A;  2E2I K;  5TMC A;  4A3G C;  2JA8 C;  1TWG K;  5IYC K;  4A3F K;  2WAQ D;  2O5I A;  4BBR K;  2VUM K;  4BBS K;  2R93 K;  1TWF C;  4LK0 A;  1Y1V C;  4XSX A;  1TWA C;  4Y7N C;  3S1M C;  2B63 K;  3I4M K;  2NVT K;  4AYB L;  3S16 K;  3S1Q K;  3RZO K;  4C2M K;  2JA5 K;  3S2D C;  4MEX A;  4BXX C;  4X6A C;  2NVX C;  3S2H C;  1I50 C;  3PO2 C;  3PO3 C;  2R92 C;  4QIW D;  1YNN A;  4A3J C;  3GTG C;  4A3I C;  1SMY A;  5M5Y K;  3CQZ K;  5IYB K;  3GTM K;  3H0G K;  3S1R C;  4A3K C;  3FKI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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