3GTKC

Backtracked rna polymerase ii complex with 18mer rna
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 53
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtkC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtkC01
3PO3C 4X6AK 2E2IC 3CQZC 4BBRC 1TWCK 2PA8D 4Y52C 4XLPA 2E2JC 1SFOC 5M5WK 2R92K 4BBSK 4QIWL 1I50K 3S2DK 4OIRA 2PPBA 5IYDK 3S1NK 3RZDC 4G7HA 2A6EA 1TWAC 3DXJA 5IYCC 4A3FC 4A3GC 4Y7NC 5M5XK 5FJ8K 2JA5C 3GTMK 3GTQC 3HKZD 4JK1A 5M3MK 2JA8K 4A3EC 2JA6K 3K7AC 1YNJA 5IP9K 4A3CK 2Y0SD 4MQ9A 2NVQC 3S14K 4A3KK 5IYBC 3S2HC 4C2MC 4YFNA 4A3LC 4OINA 3GTKK 2R92C 2O5JA 4YFXA 4BBSC 1Y1VC 2PMZD 5C44C 2PA8L 2B63K 3S2DC 3HOUK 5IP7K 3RZOK 4OIPA 4A3BK 4A3IK 2R7ZK 3S1NC 4NOIA 3HOZK 1I6HK 1TWGK 4BY1C 4LK0A 3GTGC 5FLMK 3I4MC 1R9TK 2VUMK 2YU9C 2JA8C 2JA6C 5IP9C 3HKZL 3FKIK 1TWHK 1WCMK 2A68A 4C3IK 1SMYA 1K83K 4C3HC 4A3CC 2JA7K 4MEYA 1Y1WK 4A3KC 2CW0A 2Y0SL 1IW7A 4BY7K 5C4JC 3S16K 3HOYC 2R93K 3H0GK 3GTJC 2B63C 3RZOC 5IP7C 4QJVB 2PMZL 1YNNA 3H3VD 4LK1A 4A3BC 3S1MK 3HOWK 3HOZC 3S1RK 4AYBD 1TWGC 4X6AC 3GTLK 3S15K 4KN7A 5FLMC 1TWCC 2WB1D 1R9TC 2VUMC 3GTPK 1I50C 3FKIC 1WCMC 4C3IC 1K83C 2NVTK 2JA7C 1TWFK 5IYDC 4BXXK 3GTOK 2NVYK 2BE5A 1BDFA 3GTMC 4G7ZA 5D4DA 3S16C 3M3YK 3PO3K 3WODA 3S1QK 2R93C 3S17K 2E2IK 3H0GC 3CQZK 5TMCA 4KN4A 4A3DK 3I4NK 4Y52K 3HOWC 3HOXK 3S14C 4YFKA 3S1RC 3GTLC 3H3VL 4A3JK 4AYBL 3GTKC 3GTPC 4A3MK 4QJVA 4LLGA 2WB1L 2NVXK 4KMUA 3PO2K 1XPPA 3HOUC 4Y7NK 3GTQK 1TWFC 4MEXA 1ZYRA 2WAQD 4A3IC 2R7ZC 1I6HC 3GTOC 5M3FK 3HOVK 2E2HK 4A93K 1I3QK 5TMFA 4ZH4A 3M3YC 3S1QC 4OIQA 3S17C 5C4XK 5IYBK 3S2HK 3M4OK 1TWHC 4A3DC 4C2MK 4A3LK 2A69A 3I4NC 3HOXC 1Y1WC 4C3JK 1Y1VK 4Q4ZA 5C44K 4A3JC 4BY7C 5C3EK 4G7OA 2YU9K 4A3MC 2O5IA 3PO2C 2NVXC 4GZYA 4BY1K 1I6VA 3GTGK 4BBRK 3I4MK 4XSZA 4QIWD 3S1MC 4A93C 1SFOK 3HOVC 2E2JK 2E2HC 3S15C 2WAQL 1I3QC 4C3HK 3EQLA 4LJZA 3RZDK 5C4XC 4YG2A 3M4OC 4XSXA 1TWAK 5C4JK 1HQMA 5IYCK 4A3FK 4A3GK 4XLNA 2NVTC 2JA5K 4C3JC 3HOYK 4BXXC 4Q5SA 3GTJK 2NVYC 3K7AK 4OIOA 4A3EK 5M5YK 5C3EC 2A6HA 2NVQK
chains in the Genus database with same CATH superfamily
2ZFZA 1R9TA 2VUMA 3OPFA 4BBRC 4KMAA 2E2JC 2R92K 3QX3A 4IO9S 1TWAC 2R93A 3DXJA 4Y7NC 5E68A 5FJ8K 1XZQB 2JA6K 3K7AC 5IP9K 1RU0A 5IYBC 4DDQA 2GSNA 4FZBA 2R92C 1TWFA 2B63K 3RZOK 5IP7K 1I6HK 4A3IK 4NOIA 1TWGK 4GT9A 3GTGC 3CQZA 4GTBA 3V4GA 1USMA 2JA6C 5IP9C 1TWHK 1WCMK 4C3IK 2P5MA 4C3HC 3TFIA 4KM8A 4MEYA 1Y1WK 2GAGC 4BY7K 3AD8C 1IW7A 1XZQA 4GTCA 3GEEA 2B63C 3RZOC 5IP7C 4QJVB 3H3VD 4KC6A 3S1MK 3S1RK 4AYBD 1TWGC 5JVOA 1O2FB 4KN7A 2WB1D 1F93A 3AH5A 4GTFA 3GTPK 1WOSA 1Y1VA 3IPJA 1DCOA 1WCMC 4C3IC 3TFJA 2NVYK 3Q3QA 3GTMC 4G7ZA 3WODA 3OEPA 2E2IK 1EFWA 4A3DK 2XCOA 4Y52K 3S1RC 4KASA 1TWAA 1PJ5A 5CHPA 3GTPC 4A3MK 4QJVA 4LLGA 2NVXK 2KPUA 1WOPA 1F9NA 4MEXA 2E2HK 4O2DA 1WOOA 1PJ7A 3MMLB 2XCRB 3S2HK 3M4OK 4A3DC 4C2MK 2A69A 4PAAA 4Q4ZA 1DCHA 1WORA 4G7OA 4XCHA 4A3MC 2O5IA 5DM6S 2NVXC 2EBBA 4BY1K 2JA6A 1ISEA 4QIWD 2E2HC 3S15C 4LJZA 1B4AA 3M4OC 2PHCB 5IYCK 2B63A 2W7VA 2NVTC 2JA5K 3GTJK 3FOFA 4A3EK 4WJ4A 1TWGA 5M5YK 2NVQK 1F7UA 4X6AK 1VLOA 2RH6A 1UV7A 3CQZC 2PA8D 1TWHA 4WFNS 1WCMA 4LR2A 5EGEA 4BBSK 1Y1WA 1I50K 2P8TA 2PPBA 1EK8A 3LAJA 2CFAA 4KB4A 3S1NK 3AQPA 3SZZA 5IYCC 2JA5C 1O27A 1HI9A 3HKZD 4JK1A 1DD5A 4LOWA 5HL8A 4A3EC 1YNJA 3PIPS 1PJ6A 4A3CK 2NVQC 3GTPA 4A3KK 3BP8C 1ZVUA 4A3LC 4YFNA 4BBSC 1Y1VC 4LQYA 2NVYA 4KDDA 2D6FC 2R7ZK 3S1NC 3HOZK 4GTEA 1XXBA 2E2IA 4LK0A 1BJTA 1XZPB 3I4MC 5TJ3A 2RGRA 2A68A 4A3CC 2JA7K 4A3KC 3FHZA 2NVXA 5C4JC 1O2AA 3S16K 1VH2A 3HOYC 3H0GK 2E2HA 3HOZC 4BLBA 1WSRA 1FEUA 1O28A 1VGXA 5IOSA 3GDZA 2JA7C 2ZJRS 3GTOK 4WF9S 1XZPA 2BE5A 5IORA 1WQFA 1BDFA 1IE0A 5D4DA 3S16C 3AD9C 2KWAA 3PO3K 3S17K 3H0GC 2L3UA 5TMCA 3CAGA 5EGHA 3HOXK 3H3VL 4YFKA 2GSUA 4A3JK 4AYBL 3GEIA 5JFEA 2JA5A 2WB1L 4KMUA 1XPPA 4IOAS 3GTJA 3GTQK 1ZYRA 4A3IC 1I6HC 2XCQA 3GTOC 4FM9A 3PIOS 1DCPA 3FOEA 4ZH4A 4KMHA 3OREA 4C45A 3S17C 1TWHC 1I50A 1O2BA 3HOXC 1Y1WC 4C3JK 5C44K 4A3JC 4BY7C 5C3EK 4GZYA 3N0CA 3S1MC 1JOEA 1SFOK 3BP3A 3G4AA 3AQOA 1F7VA 3EQLA 3RZDK 2ZJPS 4A3GK 3L4JA 1ZBSA 4C3JC 5IOQA 2ZJQS 2R7ZA 2NVYC 3DLLS 5C3EC 2A6HA 3GEHA 3ERED 4WFBS 2E2IC 1EI6A 1G51A 2ZUEA 1TWCK 4Y52C 4XLPA 1SFOC 5M5WK 1J98A 3CF5S 4QIWL 2JA7A 1J6XA 4OIRA 1EH1A 3T01A 4KARA 4PABA 2ZUFA 5IYDK 4KM9A 3RZDC 2CFAB 3H0GA 1ZQ1C 4A3GC 5M5XK 4GTLA 2Y0SD 4MQ9A 3S14K 2L5NA 4M1XA 3S2HC 4P9SA 4C2MC 3GTKK 4OINA 2O5JA 2PA8L 1V5VA 2PMZD 3HOUK 3GTOA 3N0BA 3A8KA 4ILDA 1X31C 4J3NA 3TTGA 4BY1C 5FLMK 1O26A 3ADAC 3HKZL 3FKIK 1K83K 2CW0A 3GTQA 3GTJC 1YNNA 2GSOA 4X6AC 3GTLK 1EQRA 5CJ9A 5FLMC 1O25A 1I50C 3FKIC 5JVGS 1K83C 1WQHA 4BXXK 3LYWA 3M3YK 3S1QK 1SFOA 2KQ1A 3I4NK 4G0VA 1VJEA 3GTLC 2Y3PA 4Y7NK 1INNA 2WAQD 2R7ZC 3A8IA 3HOVK 4A93K 1J6VA 4U67S 1I3QK 1TWCA 3M3YC 3S1QC 4OIQA 3SZYA 5IYBK 1GE9A 3VA7A 3I4NC 1C0AA 2KXYA 4P5AA 4BLAA 3BUEA 2YU9K 1O29A 3GTGK 1O24A 4A93C 3HOVC 4WJ3M 4KAWX 1I3QC 4C3HK 1WIHA 1IL2A 3GTKA 4KMDA 4A3FK 2JH3A 4Q5SA 3T02A 1JVIA 2YU9C 3PO3C 4GTAA 3FKIA 3LPXA 1K83A 1XXAA 1JQWA 4WFAS 3S0XA 3S2DK 1IQ0A 1USOA 4G7HA 2A6EA 3GTMK 4A3FC 3N3YA 3GTQC 2JA8K 5M3MK 3GSIA 3GTLA 1AB4A 1KQ4A 1YX2A 4YFXA 5C44C 3S2DC 3T00A 4KB2A 4OIPA 1WSVA 2FQTA 3A8JA 4RMFA 5L46A 4GFQA 4A3BK 4WCES 2GAHC 5JVHS 3NUHA 1R9TK 2VUMK 2JA8C 5IOTA 4IOCS 3LAPA 1SMYA 1XXCA 3JSTA 2Y0SL 2V6UA 2R93K 4G0WA 1VRQC 2PMZL 4LK1A 4A3BC 1I3QA 3HOWK 5DM7S 3L4KA 3S15K 1TWCC 1R9TC 2VUMC 1J6WA 2R92A 2V6SA 2NVTK 1IBAA 1TWFK 5IYDC 2YU9A 1ZXOA 3GTGA 2R93C 3CQZK 1BS2A 4KN4A 2V6TA 1WQGA 3HOWC 3S14C 4WILA 3HXAA 3GTKC 3AD7C 3PO2K 3GIRA 1YCLA 3HOUC 1TWFC 5M3FK 4BKWA 4G0UA 5TMFA 1L0WA 5HQHA 5C4XK 3TFHA 1BGWA 4A3LK 1Y1VK 3GTMA 3G4CA 3PO2C 2FQOA 1I6VA 4BBRK 3I4MK 4XSZA 1IS1A 4GTDA 2E2JK 2WAQL 4AH6A 5C4XC 4YG2A 1TWAK 4XSXA 5HL7S 4P5BA 1HQMA 5C4JK 4XLNA 1B4BA 3HOYK 4BXXC 3K7AK 4OIOA 4KATA
chains in the Genus database with same CATH topology
3PO3C 4X6AK 2E2IC 3CQZC 4BBRC 1TWCK 2PA8D 4Y52C 4XLPA 2E2JC 1SFOC 5M5WK 2R92K 4BBSK 4QIWL 1I50K 3S2DK 4OIRA 2PPBA 5IYDK 3S1NK 3RZDC 4G7HA 2A6EA 1TWAC 3DXJA 5IYCC 4A3FC 4A3GC 4Y7NC 5M5XK 5FJ8K 2JA5C 3GTMK 3GTQC 3HKZD 4JK1A 5M3MK 2JA8K 4A3EC 2JA6K 3K7AC 1YNJA 5IP9K 4A3CK 2Y0SD 4MQ9A 2NVQC 3S14K 4A3KK 5IYBC 3S2HC 4C2MC 4YFNA 4A3LC 4OINA 3GTKK 2R92C 2O5JA 4YFXA 4BBSC 1Y1VC 2PMZD 5C44C 2PA8L 2B63K 3S2DC 3HOUK 5IP7K 3RZOK 4OIPA 4A3BK 4A3IK 2R7ZK 3S1NC 4NOIA 3HOZK 1I6HK 1TWGK 4BY1C 4LK0A 3GTGC 5FLMK 3I4MC 1R9TK 2VUMK 2YU9C 2JA8C 2JA6C 5IP9C 3HKZL 3FKIK 1TWHK 1WCMK 2A68A 4C3IK 1SMYA 1K83K 4C3HC 4A3CC 2JA7K 4MEYA 1Y1WK 4A3KC 2CW0A 2Y0SL 1IW7A 4BY7K 5C4JC 3S16K 3HOYC 2R93K 3H0GK 3GTJC 2B63C 3RZOC 5IP7C 4QJVB 2PMZL 1YNNA 3H3VD 4LK1A 4A3BC 3S1MK 3HOWK 3HOZC 3S1RK 4AYBD 1TWGC 4X6AC 3GTLK 3S15K 4KN7A 5FLMC 1TWCC 2WB1D 1R9TC 2VUMC 3GTPK 1I50C 3FKIC 1WCMC 4C3IC 1K83C 2NVTK 2JA7C 1TWFK 5IYDC 4BXXK 3GTOK 2NVYK 2BE5A 1BDFA 3GTMC 4G7ZA 5D4DA 3S16C 3M3YK 3PO3K 3WODA 3S1QK 2R93C 3S17K 2E2IK 3H0GC 3CQZK 5TMCA 4KN4A 4A3DK 3I4NK 4Y52K 3HOWC 3HOXK 3S14C 4YFKA 3S1RC 3GTLC 3H3VL 4A3JK 4AYBL 3GTKC 3GTPC 4A3MK 4QJVA 4LLGA 2WB1L 2NVXK 4KMUA 3PO2K 1XPPA 3HOUC 4Y7NK 3GTQK 1TWFC 4MEXA 1ZYRA 2WAQD 4A3IC 2R7ZC 1I6HC 3GTOC 5M3FK 3HOVK 2E2HK 4A93K 1I3QK 5TMFA 4ZH4A 3M3YC 3S1QC 4OIQA 3S17C 5C4XK 5IYBK 3S2HK 3M4OK 1TWHC 4A3DC 4C2MK 4A3LK 2A69A 3I4NC 3HOXC 1Y1WC 4C3JK 1Y1VK 4Q4ZA 5C44K 4A3JC 4BY7C 5C3EK 4G7OA 2YU9K 4A3MC 2O5IA 3PO2C 2NVXC 4GZYA 4BY1K 1I6VA 3GTGK 4BBRK 3I4MK 4XSZA 4QIWD 3S1MC 4A93C 1SFOK 3HOVC 2E2JK 2E2HC 3S15C 2WAQL 1I3QC 4C3HK 3EQLA 4LJZA 3RZDK 5C4XC 4YG2A 3M4OC 4XSXA 1TWAK 5C4JK 1HQMA 5IYCK 4A3FK 4A3GK 4XLNA 2NVTC 2JA5K 4C3JC 3HOYK 4BXXC 4Q5SA 3GTJK 2NVYC 3K7AK 4OIOA 4A3EK 5M5YK 5C3EC 2A6HA 2NVQK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PO3 C;  4X6A K;  2E2I C;  3CQZ C;  4BBR C;  1TWC K;  2PA8 D;  4Y52 C;  4XLP A;  2E2J C;  1SFO C;  5M5W K;  2R92 K;  4BBS K;  4QIW L;  1I50 K;  3S2D K;  4OIR A;  2PPB A;  5IYD K;  3S1N K;  3RZD C;  4G7H A;  2A6E A;  1TWA C;  3DXJ A;  5IYC C;  4A3F C;  4A3G C;  4Y7N C;  5M5X K;  5FJ8 K;  2JA5 C;  3GTM K;  3GTQ C;  3HKZ D;  4JK1 A;  5M3M K;  2JA8 K;  4A3E C;  2JA6 K;  3K7A C;  1YNJ A;  5IP9 K;  4A3C K;  2Y0S D;  4MQ9 A;  2NVQ C;  3S14 K;  4A3K K;  5IYB C;  3S2H C;  4C2M C;  4YFN A;  4A3L C;  4OIN A;  3GTK K;  2R92 C;  2O5J A;  4YFX A;  4BBS C;  1Y1V C;  2PMZ D;  5C44 C;  2PA8 L;  2B63 K;  3S2D C;  3HOU K;  5IP7 K;  3RZO K;  4OIP A;  4A3B K;  4A3I K;  2R7Z K;  3S1N C;  4NOI A;  3HOZ K;  1I6H K;  1TWG K;  4BY1 C;  4LK0 A;  3GTG C;  5FLM K;  3I4M C;  1R9T K;  2VUM K;  2YU9 C;  2JA8 C;  2JA6 C;  5IP9 C;  3HKZ L;  3FKI K;  1TWH K;  1WCM K;  2A68 A;  4C3I K;  1SMY A;  1K83 K;  4C3H C;  4A3C C;  2JA7 K;  4MEY A;  1Y1W K;  4A3K C;  2CW0 A;  2Y0S L;  1IW7 A;  4BY7 K;  5C4J C;  3S16 K;  3HOY C;  2R93 K;  3H0G K;  3GTJ C;  2B63 C;  3RZO C;  5IP7 C;  4QJV B;  2PMZ L;  1YNN A;  3H3V D;  4LK1 A;  4A3B C;  3S1M K;  3HOW K;  3HOZ C;  3S1R K;  4AYB D;  1TWG C;  4X6A C;  3GTL K;  3S15 K;  4KN7 A;  5FLM C;  1TWC C;  2WB1 D;  1R9T C;  2VUM C;  3GTP K;  1I50 C;  3FKI C;  1WCM C;  4C3I C;  1K83 C;  2NVT K;  2JA7 C;  1TWF K;  5IYD C;  4BXX K;  3GTO K;  2NVY K;  2BE5 A;  1BDF A;  3GTM C;  4G7Z A;  5D4D A;  3S16 C;  3M3Y K;  3PO3 K;  3WOD A;  3S1Q K;  2R93 C;  3S17 K;  2E2I K;  3H0G C;  3CQZ K;  5TMC A;  4KN4 A;  4A3D K;  3I4N K;  4Y52 K;  3HOW C;  3HOX K;  3S14 C;  4YFK A;  3S1R C;  3GTL C;  3H3V L;  4A3J K;  4AYB L;  3GTK C;  3GTP C;  4A3M K;  4QJV A;  4LLG A;  2WB1 L;  2NVX K;  4KMU A;  3PO2 K;  1XPP A;  3HOU C;  4Y7N K;  3GTQ K;  1TWF C;  4MEX A;  1ZYR A;  2WAQ D;  4A3I C;  2R7Z C;  1I6H C;  3GTO C;  5M3F K;  3HOV K;  2E2H K;  4A93 K;  1I3Q K;  5TMF A;  4ZH4 A;  3M3Y C;  3S1Q C;  4OIQ A;  3S17 C;  5C4X K;  5IYB K;  3S2H K;  3M4O K;  1TWH C;  4A3D C;  4C2M K;  4A3L K;  2A69 A;  3I4N C;  3HOX C;  1Y1W C;  4C3J K;  1Y1V K;  4Q4Z A;  5C44 K;  4A3J C;  4BY7 C;  5C3E K;  4G7O A;  2YU9 K;  4A3M C;  2O5I A;  3PO2 C;  2NVX C;  4GZY A;  4BY1 K;  1I6V A;  3GTG K;  4BBR K;  3I4M K;  4XSZ A;  4QIW D;  3S1M C;  4A93 C;  1SFO K;  3HOV C;  2E2J K;  2E2H C;  3S15 C;  2WAQ L;  1I3Q C;  4C3H K;  3EQL A;  4LJZ A;  3RZD K;  5C4X C;  4YG2 A;  3M4O C;  4XSX A;  1TWA K;  5C4J K;  1HQM A;  5IYC K;  4A3F K;  4A3G K;  4XLN A;  2NVT C;  2JA5 K;  4C3J C;  3HOY K;  4BXX C;  4Q5S A;  3GTJ K;  2NVY C;  3K7A K;  4OIO A;  4A3E K;  5M5Y K;  5C3E C;  2A6H A;  2NVQ K; 
#chains in the Genus database with same CATH topology
 2ZFZ A;  1R9T A;  2VUM A;  3OPF A;  4BBR C;  4KMA A;  2E2J C;  2R92 K;  3QX3 A;  4IO9 S;  1TWA C;  2R93 A;  3DXJ A;  4Y7N C;  5E68 A;  5FJ8 K;  1XZQ B;  2JA6 K;  3K7A C;  5IP9 K;  1RU0 A;  5IYB C;  4DDQ A;  2GSN A;  4FZB A;  2R92 C;  1TWF A;  2B63 K;  3RZO K;  5IP7 K;  1I6H K;  4A3I K;  4NOI A;  1TWG K;  4GT9 A;  3GTG C;  3CQZ A;  4GTB A;  3V4G A;  1USM A;  2JA6 C;  5IP9 C;  1TWH K;  1WCM K;  4C3I K;  2P5M A;  4C3H C;  3TFI A;  4KM8 A;  4MEY A;  1Y1W K;  2GAG C;  4BY7 K;  3AD8 C;  1IW7 A;  1XZQ A;  4GTC A;  3GEE A;  2B63 C;  3RZO C;  5IP7 C;  4QJV B;  3H3V D;  4KC6 A;  3S1M K;  3S1R K;  4AYB D;  1TWG C;  5JVO A;  1O2F B;  4KN7 A;  2WB1 D;  1F93 A;  3AH5 A;  4GTF A;  3GTP K;  1WOS A;  1Y1V A;  3IPJ A;  1DCO A;  1WCM C;  4C3I C;  3TFJ A;  2NVY K;  3Q3Q A;  3GTM C;  4G7Z A;  3WOD A;  3OEP A;  2E2I K;  1EFW A;  4A3D K;  2XCO A;  4Y52 K;  3S1R C;  4KAS A;  1TWA A;  1PJ5 A;  5CHP A;  3GTP C;  4A3M K;  4QJV A;  4LLG A;  2NVX K;  2KPU A;  1WOP A;  1F9N A;  4MEX A;  2E2H K;  4O2D A;  1WOO A;  1PJ7 A;  3MML B;  2XCR B;  3S2H K;  3M4O K;  4A3D C;  4C2M K;  2A69 A;  4PAA A;  4Q4Z A;  1DCH A;  1WOR A;  4G7O A;  4XCH A;  4A3M C;  2O5I A;  5DM6 S;  2NVX C;  2EBB A;  4BY1 K;  2JA6 A;  1ISE A;  4QIW D;  2E2H C;  3S15 C;  4LJZ A;  1B4A A;  3M4O C;  2PHC B;  5IYC K;  2B63 A;  2W7V A;  2NVT C;  2JA5 K;  3GTJ K;  3FOF A;  4A3E K;  4WJ4 A;  1TWG A;  5M5Y K;  2NVQ K;  1F7U A;  4X6A K;  1VLO A;  2RH6 A;  1UV7 A;  3CQZ C;  2PA8 D;  1TWH A;  4WFN S;  1WCM A;  4LR2 A;  5EGE A;  4BBS K;  1Y1W A;  1I50 K;  2P8T A;  2PPB A;  1EK8 A;  3LAJ A;  2CFA A;  4KB4 A;  3S1N K;  3AQP A;  3SZZ A;  5IYC C;  2JA5 C;  1O27 A;  1HI9 A;  3HKZ D;  4JK1 A;  1DD5 A;  4LOW A;  5HL8 A;  4A3E C;  1YNJ A;  3PIP S;  1PJ6 A;  4A3C K;  2NVQ C;  3GTP A;  4A3K K;  3BP8 C;  1ZVU A;  4A3L C;  4YFN A;  4BBS C;  1Y1V C;  4LQY A;  2NVY A;  4KDD A;  2D6F C;  2R7Z K;  3S1N C;  3HOZ K;  4GTE A;  1XXB A;  2E2I A;  4LK0 A;  1BJT A;  1XZP B;  3I4M C;  5TJ3 A;  2RGR A;  2A68 A;  4A3C C;  2JA7 K;  4A3K C;  3FHZ A;  2NVX A;  5C4J C;  1O2A A;  3S16 K;  1VH2 A;  3HOY C;  3H0G K;  2E2H A;  3HOZ C;  4BLB A;  1WSR A;  1FEU A;  1O28 A;  1VGX A;  5IOS A;  3GDZ A;  2JA7 C;  2ZJR S;  3GTO K;  4WF9 S;  1XZP A;  2BE5 A;  5IOR A;  1WQF A;  1BDF A;  1IE0 A;  5D4D A;  3S16 C;  3AD9 C;  2KWA A;  3PO3 K;  3S17 K;  3H0G C;  2L3U A;  5TMC A;  3CAG A;  5EGH A;  3HOX K;  3H3V L;  4YFK A;  2GSU A;  4A3J K;  4AYB L;  3GEI A;  5JFE A;  2JA5 A;  2WB1 L;  4KMU A;  1XPP A;  4IOA S;  3GTJ A;  3GTQ K;  1ZYR A;  4A3I C;  1I6H C;  2XCQ A;  3GTO C;  4FM9 A;  3PIO S;  1DCP A;  3FOE A;  4ZH4 A;  4KMH A;  3ORE A;  4C45 A;  3S17 C;  1TWH C;  1I50 A;  1O2B A;  3HOX C;  1Y1W C;  4C3J K;  5C44 K;  4A3J C;  4BY7 C;  5C3E K;  4GZY A;  3N0C A;  3S1M C;  1JOE A;  1SFO K;  3BP3 A;  3G4A A;  3AQO A;  1F7V A;  3EQL A;  3RZD K;  2ZJP S;  4A3G K;  3L4J A;  1ZBS A;  4C3J C;  5IOQ A;  2ZJQ S;  2R7Z A;  2NVY C;  3DLL S;  5C3E C;  2A6H A;  3GEH A;  3ERE D;  4WFB S;  2E2I C;  1EI6 A;  1G51 A;  2ZUE A;  1TWC K;  4Y52 C;  4XLP A;  1SFO C;  5M5W K;  1J98 A;  3CF5 S;  4QIW L;  2JA7 A;  1J6X A;  4OIR A;  1EH1 A;  3T01 A;  4KAR A;  4PAB A;  2ZUF A;  5IYD K;  4KM9 A;  3RZD C;  2CFA B;  3H0G A;  1ZQ1 C;  4A3G C;  5M5X K;  4GTL A;  2Y0S D;  4MQ9 A;  3S14 K;  2L5N A;  4M1X A;  3S2H C;  4P9S A;  4C2M C;  3GTK K;  4OIN A;  2O5J A;  2PA8 L;  1V5V A;  2PMZ D;  3HOU K;  3GTO A;  3N0B A;  3A8K A;  4ILD A;  1X31 C;  4J3N A;  3TTG A;  4BY1 C;  5FLM K;  1O26 A;  3ADA C;  3HKZ L;  3FKI K;  1K83 K;  2CW0 A;  3GTQ A;  3GTJ C;  1YNN A;  2GSO A;  4X6A C;  3GTL K;  1EQR A;  5CJ9 A;  5FLM C;  1O25 A;  1I50 C;  3FKI C;  5JVG S;  1K83 C;  1WQH A;  4BXX K;  3LYW A;  3M3Y K;  3S1Q K;  1SFO A;  2KQ1 A;  3I4N K;  4G0V A;  1VJE A;  3GTL C;  2Y3P A;  4Y7N K;  1INN A;  2WAQ D;  2R7Z C;  3A8I A;  3HOV K;  4A93 K;  1J6V A;  4U67 S;  1I3Q K;  1TWC A;  3M3Y C;  3S1Q C;  4OIQ A;  3SZY A;  5IYB K;  1GE9 A;  3VA7 A;  3I4N C;  1C0A A;  2KXY A;  4P5A A;  4BLA A;  3BUE A;  2YU9 K;  1O29 A;  3GTG K;  1O24 A;  4A93 C;  3HOV C;  4WJ3 M;  4KAW X;  1I3Q C;  4C3H K;  1WIH A;  1IL2 A;  3GTK A;  4KMD A;  4A3F K;  2JH3 A;  4Q5S A;  3T02 A;  1JVI A;  2YU9 C;  3PO3 C;  4GTA A;  3FKI A;  3LPX A;  1K83 A;  1XXA A;  1JQW A;  4WFA S;  3S0X A;  3S2D K;  1IQ0 A;  1USO A;  4G7H A;  2A6E A;  3GTM K;  4A3F C;  3N3Y A;  3GTQ C;  2JA8 K;  5M3M K;  3GSI A;  3GTL A;  1AB4 A;  1KQ4 A;  1YX2 A;  4YFX A;  5C44 C;  3S2D C;  3T00 A;  4KB2 A;  4OIP A;  1WSV A;  2FQT A;  3A8J A;  4RMF A;  5L46 A;  4GFQ A;  4A3B K;  4WCE S;  2GAH C;  5JVH S;  3NUH A;  1R9T K;  2VUM K;  2JA8 C;  5IOT A;  4IOC S;  3LAP A;  1SMY A;  1XXC A;  3JST A;  2Y0S L;  2V6U A;  2R93 K;  4G0W A;  1VRQ C;  2PMZ L;  4LK1 A;  4A3B C;  1I3Q A;  3HOW K;  5DM7 S;  3L4K A;  3S15 K;  1TWC C;  1R9T C;  2VUM C;  1J6W A;  2R92 A;  2V6S A;  2NVT K;  1IBA A;  1TWF K;  5IYD C;  2YU9 A;  1ZXO A;  3GTG A;  2R93 C;  3CQZ K;  1BS2 A;  4KN4 A;  2V6T A;  1WQG A;  3HOW C;  3S14 C;  4WIL A;  3HXA A;  3GTK C;  3AD7 C;  3PO2 K;  3GIR A;  1YCL A;  3HOU C;  1TWF C;  5M3F K;  4BKW A;  4G0U A;  5TMF A;  1L0W A;  5HQH A;  5C4X K;  3TFH A;  1BGW A;  4A3L K;  1Y1V K;  3GTM A;  3G4C A;  3PO2 C;  2FQO A;  1I6V A;  4BBR K;  3I4M K;  4XSZ A;  1IS1 A;  4GTD A;  2E2J K;  2WAQ L;  4AH6 A;  5C4X C;  4YG2 A;  1TWA K;  4XSX A;  5HL7 S;  4P5B A;  1HQM A;  5C4J K;  4XLN A;  1B4B A;  3HOY K;  4BXX C;  3K7A K;  4OIO A;  4KAT A; 
#chains in the Genus database with same CATH homology
 3PO3 C;  4X6A K;  2E2I C;  3CQZ C;  4BBR C;  1TWC K;  2PA8 D;  4Y52 C;  4XLP A;  2E2J C;  1SFO C;  5M5W K;  2R92 K;  4BBS K;  4QIW L;  1I50 K;  3S2D K;  4OIR A;  2PPB A;  5IYD K;  3S1N K;  3RZD C;  4G7H A;  2A6E A;  1TWA C;  3DXJ A;  5IYC C;  4A3F C;  4A3G C;  4Y7N C;  5M5X K;  5FJ8 K;  2JA5 C;  3GTM K;  3GTQ C;  3HKZ D;  4JK1 A;  5M3M K;  2JA8 K;  4A3E C;  2JA6 K;  3K7A C;  1YNJ A;  5IP9 K;  4A3C K;  2Y0S D;  4MQ9 A;  2NVQ C;  3S14 K;  4A3K K;  5IYB C;  3S2H C;  4C2M C;  4YFN A;  4A3L C;  4OIN A;  3GTK K;  2R92 C;  2O5J A;  4YFX A;  4BBS C;  1Y1V C;  2PMZ D;  5C44 C;  2PA8 L;  2B63 K;  3S2D C;  3HOU K;  5IP7 K;  3RZO K;  4OIP A;  4A3B K;  4A3I K;  2R7Z K;  3S1N C;  4NOI A;  3HOZ K;  1I6H K;  1TWG K;  4BY1 C;  4LK0 A;  3GTG C;  5FLM K;  3I4M C;  1R9T K;  2VUM K;  2YU9 C;  2JA8 C;  2JA6 C;  5IP9 C;  3HKZ L;  3FKI K;  1TWH K;  1WCM K;  2A68 A;  4C3I K;  1SMY A;  1K83 K;  4C3H C;  4A3C C;  2JA7 K;  4MEY A;  1Y1W K;  4A3K C;  2CW0 A;  2Y0S L;  1IW7 A;  4BY7 K;  5C4J C;  3S16 K;  3HOY C;  2R93 K;  3H0G K;  3GTJ C;  2B63 C;  3RZO C;  5IP7 C;  4QJV B;  2PMZ L;  1YNN A;  3H3V D;  4LK1 A;  4A3B C;  3S1M K;  3HOW K;  3HOZ C;  3S1R K;  4AYB D;  1TWG C;  4X6A C;  3GTL K;  3S15 K;  4KN7 A;  5FLM C;  1TWC C;  2WB1 D;  1R9T C;  2VUM C;  3GTP K;  1I50 C;  3FKI C;  1WCM C;  4C3I C;  1K83 C;  2NVT K;  2JA7 C;  1TWF K;  5IYD C;  4BXX K;  3GTO K;  2NVY K;  2BE5 A;  1BDF A;  3GTM C;  4G7Z A;  5D4D A;  3S16 C;  3M3Y K;  3PO3 K;  3WOD A;  3S1Q K;  2R93 C;  3S17 K;  2E2I K;  3H0G C;  3CQZ K;  5TMC A;  4KN4 A;  4A3D K;  3I4N K;  4Y52 K;  3HOW C;  3HOX K;  3S14 C;  4YFK A;  3S1R C;  3GTL C;  3H3V L;  4A3J K;  4AYB L;  3GTK C;  3GTP C;  4A3M K;  4QJV A;  4LLG A;  2WB1 L;  2NVX K;  4KMU A;  3PO2 K;  1XPP A;  3HOU C;  4Y7N K;  3GTQ K;  1TWF C;  4MEX A;  1ZYR A;  2WAQ D;  4A3I C;  2R7Z C;  1I6H C;  3GTO C;  5M3F K;  3HOV K;  2E2H K;  4A93 K;  1I3Q K;  5TMF A;  4ZH4 A;  3M3Y C;  3S1Q C;  4OIQ A;  3S17 C;  5C4X K;  5IYB K;  3S2H K;  3M4O K;  1TWH C;  4A3D C;  4C2M K;  4A3L K;  2A69 A;  3I4N C;  3HOX C;  1Y1W C;  4C3J K;  1Y1V K;  4Q4Z A;  5C44 K;  4A3J C;  4BY7 C;  5C3E K;  4G7O A;  2YU9 K;  4A3M C;  2O5I A;  3PO2 C;  2NVX C;  4GZY A;  4BY1 K;  1I6V A;  3GTG K;  4BBR K;  3I4M K;  4XSZ A;  4QIW D;  3S1M C;  4A93 C;  1SFO K;  3HOV C;  2E2J K;  2E2H C;  3S15 C;  2WAQ L;  1I3Q C;  4C3H K;  3EQL A;  4LJZ A;  3RZD K;  5C4X C;  4YG2 A;  3M4O C;  4XSX A;  1TWA K;  5C4J K;  1HQM A;  5IYC K;  4A3F K;  4A3G K;  4XLN A;  2NVT C;  2JA5 K;  4C3J C;  3HOY K;  4BXX C;  4Q5S A;  3GTJ K;  2NVY C;  3K7A K;  4OIO A;  4A3E K;  5M5Y K;  5C3E C;  2A6H A;  2NVQ K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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