3GTKC

Backtracked rna polymerase ii complex with 18mer rna
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 53
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtkC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtkC01
4NOIA 1TWFK 4A3CC 2NVYC 4YFKA 1TWGC 4QIWD 2PMZD 5C4XC 2Y0SL 5FLMK 3CQZK 2CW0A 3HOVC 3S2DK 4KN7A 2NVQC 5M5YK 3I4NC 5M3FK 4A3FK 3H0GC 4C3HK 1TWHK 1TWFC 4OIPA 2R92C 4XLNA 5IYCC 1R9TC 2BE5A 3M3YK 4X6AC 4XSZA 3S1MC 5IYBK 1K83C 1IW7A 3GTGK 3I4NK 3HOUC 4Y52C 3PO3C 3GTQK 3HOVK 2JA6K 1I6HC 2A6HA 2JA8C 2WAQL 4A3KK 2E2IK 1R9TK 3GTMK 1WCMC 3GTJK 1K83K 1TWHC 1TWAC 3S15C 4JK1A 4A3EK 4A3JK 4BXXC 5C3EC 3S1QC 4Y7NC 3PO2K 4A93C 3EQLA 4A3GK 3S1RC 4A3MC 4YG2A 5M5XK 4BY1K 3GTJC 2E2HK 3PO3K 4C3HC 3S14C 1SFOC 4A3BK 4BBRK 1BDFA 3CQZC 4ZH4A 3GTOC 1TWCK 4OIRA 1XPPA 4C3JK 3M3YC 3H3VL 4A3DC 4YFXA 2YU9K 3S1MK 1I3QC 3K7AC 4YFNA 3RZOC 3S2DC 1TWGK 3FKIC 4OIQA 5IYCK 2JA7C 2A68A 2R92K 3GTLK 3HOZC 2NVQK 1TWCC 4A3FC 4LK0A 4LJZA 3HOWC 3S17K 2YU9C 3S14K 3HOYK 5FLMC 2NVYK 3RZDC 3S16C 3GTMC 5M5WK 2R7ZK 2O5IA 2R93C 4GZYA 2VUMK 5C44K 4Q5SA 3HOXC 2Y0SD 4A3EC 2JA7K 4Q4ZA 5IP7C 2O5JA 4A3IK 4AYBD 4Y7NK 4KMUA 3M4OK 4LK1A 4G7OA 4C3JC 2PMZL 5C44C 3H0GK 4OINA 5IYDC 4G7ZA 3GTPC 4QIWL 3HOXK 4BY7K 1YNJA 3HOUK 1SMYA 4G7HA 2WB1L 2B63K 1I6VA 4MEYA 4BY1C 5IP9C 4A3LK 1I6HK 4QJVB 3S2HK 3HOWK 2A6EA 3GTPK 4LLGA 3H3VD 3HOZK 4OIOA 5C4JK 2R93K 2JA5K 1Y1VC 2NVTC 4MEXA 3HKZD 5IP9K 1Y1WK 4XSXA 1SFOK 2E2JK 4X6AK 1Y1VK 1ZYRA 3HOYC 2NVTK 4XLPA 1I3QK 3K7AK 5FJ8K 4A3IC 5IP7K 3FKIK 3RZOK 3S1NK 2JA5C 2A69A 2WAQD 4C2MC 4C3IC 3HKZL 3GTKK 3S2HC 5M3MK 2NVXC 2JA6C 2E2JC 2R7ZC 1HQMA 2E2IC 3RZDK 3M4OC 2B63C 4A3LC 1I50C 3I4MK 2WB1D 3S16K 5C4JC 3S17C 4A93K 3S1RK 5IYDK 5IYBC 5D4DA 3GTGC 4BBSC 4KN4A 4BY7C 4C3IK 3WODA 3S15K 2E2HC 4BXXK 4MQ9A 5TMFA 4A3GC 2PPBA 2JA8K 5TMCA 1I50K 1WCMK 3DXJA 4A3DK 1YNNA 4BBSK 2NVXK 1TWAK 4A3BC 4BBRC 3GTQC 4Y52K 3I4MC 4A3KC 2PA8L 4C2MK 1Y1WC 4A3MK 3GTKC 5C4XK 4A3CK 3PO2C 5C3EK 3S1QK 2PA8D 4A3JC 3GTLC 3S1NC 3GTOK 2VUMC 4AYBL 4QJVA
chains in the Genus database with same CATH superfamily
5EGEA 4A3CC 2NVYC 1TWGC 3S2DK 2CW0A 2XCRB 4KN7A 1TWFC 4OIPA 3A8JA 2R93A 4X6AC 4AH6A 1K83C 4O2DA 3I4NK 4KASA 3GTQK 3PO3C 3GTGA 2JA6K 3GTMK 5IORA 2RGRA 1PJ6A 5L46A 4Y7NC 3BP8C 4A93C 4BKWA 1I50A 3S1RC 4A3GK 5CJ9A 2FQOA 3PIPS 2E2HK 4XCHA 2ZJPS 1DCPA 4A3BK 4WF9S 4C3JK 3H3VL 1C0AA 4YFXA 1WIHA 3S1MK 3OEPA 1ZXOA 1XZQA 3GTLK 5DM6S 1YCLA 2V6TA 2YU9C 5FLMC 3V4GA 1BS2A 3GTMC 2R93C 4KB4A 2VUMK 3GTJA 3PIOS 4GTBA 4KMUA 2JA5A 3H0GK 3ERED 4G7ZA 1VRQC 3TTGA 5EGHA 1YNJA 4WFAS 1R9TA 3ADAC 2WB1L 2E2IA 4BY1C 2B63A 4QJVB 3HOWK 1WOPA 3H3VD 2JA5K 4P5AA 1Y1VC 2NVTC 4MEXA 4GTLA 2R92A 4C45A 1SFOK 2E2JK 5HQHA 1EK8A 4G0VA 4G0UA 2ZJQS 1EQRA 4XLPA 3L4KA 4KMAA 4GTDA 4J3NA 4WFBS 2JA6C 5HL8A 1HQMA 3RZDK 3M4OC 2V6SA 1O2FB 3S17C 5D4DA 4BBSC 4RMFA 1WCMA 2ZFZA 4LR2A 4A3GC 2PPBA 5TMCA 1I50K 5CHPA 4GTFA 2NVXK 4A3BC 4Y52K 2GSOA 1UV7A 3S0XA 4A3KC 4C2MK 3T00A 4A3CK 3PO2C 3S1QK 2PA8D 3GTLC 3VA7A 1AB4A 5JVGS 4NOIA 3LPXA 2GSNA 1TWFK 5FLMK 2Y0SL 5M5YK 3I4NC 2GAGC 2L3UA 2R92C 4XLNA 2CFAA 5IYCC 4XSZA 1B4AA 4KATA 4Y52C 3HOVK 4IOAS 2WAQL 2A6HA 2JA8C 4A3KK 2E2IK 1R9TK 3BP3A 4FZBA 1DD5A 3EQLA 1J98A 3IPJA 4A3MC 5M5XK 3GTJC 1KQ4A 3Q3QA 1SFOC 4BBRK 3GTOC 4A3DC 2YU9K 4YFNA 3S2DC 1TWGK 3CF5S 3DLLS 5IYCK 1WQFA 2A68A 1F9NA 1TWCA 3HOZC 4GTAA 1TWCC 4LK0A 3HOYK 3RZDC 1Y1VA 4GZYA 1USMA 1VJEA 3A8KA 2JA7K 1BGWA 1J6VA 2O5JA 3AQOA 4Y7NK 4C3JC 5JVHS 4OINA 3HOXK 5IOSA 4BY7K 3G4AA 1SMYA 1I6HK 2B63K 1I6VA 4MEYA 3LAPA 4A3LK 2JA6A 1F93A 1EH1A 1O29A 3TFJA 3HOZK 4KMHA 2R93K 3CQZA 3AD8C 3HKZD 2ZJRS 1TWFA 3GEIA 1WQHA 3G4CA 1F7VA 4XSXA 1GE9A 3AD9C 4KARA 4X6AK 1L0WA 2NVYA 3FKIK 2L5NA 3S1NK 1JVIA 3GTOA 3GTLA 2NVXA 3HKZL 2NVXC 2E2IC 2B63C 4A3LC 1I50C 4A93K 2WB1D 4G0WA 3S1RK 5IYBC 3GTGC 1INNA 2E2HC 5TMFA 1PJ7A 4U67S 3DXJA 1WCMK 2KWAA 4KAWX 1TWAK 3SZZA 4BBRC 3N3YA 3GSIA 3GTMA 1IL2A 2YU9A 3N0CA 3GEHA 5C3EK 1O26A 3TFIA 1YX2A 4WJ4A 2VUMC 3L4JA 4AYBL 4QJVA 4BLAA 2R92K 4YFKA 4QIWD 2PMZD 3CQZK 3HOVC 3GIRA 2NVQC 5M3FK 1SFOA 4A3FK 3H0GC 4C3HK 3OPFA 1RU0A 1R9TC 2BE5A 3AD7C 3M3YK 2KQ1A 1J6XA 1I6HC 1HI9A 3GTJK 1TWHC 3AQPA 3S1QC 1JOEA 3GDZA 3PO2K 4PAAA 4BLBA 4GFQA 4KC6A 2D6FC 4ZH4A 1XPPA 1TWCK 3FOFA 1TWGA 2GAHC 3FKIC 2ZUEA 2JA7C 2ZUFA 5JFEA 1G51A 4LJZA 4IO9S 3S17K 3S14K 4WFNS 4DDQA 2O5IA 3HOXC 4KM8A 4Q4ZA 5IP7C 1O28A 1VH2A 4AYBD 5E68A 4A3IK 2JH3A 4G7OA 2PMZL 5C44C 4QIWL 5IYDC 1IBAA 3HOUK 3FHZA 4G7HA 5TJ3A 3CAGA 3S2HK 4M1XA 2A6EA 3TFHA 3GTPK 5C4JK 3MMLB 1O25A 1WSVA 5IP9K 1Y1WK 1XXCA 1ISEA 1TWHA 3FOEA 1ZQ1C 1ZYRA 3HOYC 1WORA 2KPUA 1I3QK 3K7AK 3RZOK 3GTKA 4A3IC 4ILDA 5IP7K 1IS1A 2WAQD 4LOWA 1DCHA 3QX3A 2R7ZC 3S16K 1XXBA 5DM7S 2JA7A 1FEUA 1XZPA 4C3IK 4KN4A 4BY7C 4IOCS 4MQ9A 1WSRA 4A3DK 1XZPB 1ZBSA 1XZQB 3I4MC 1K83A 4WJ3M 1BJTA 5IOTA 4A3JC 1IQ0A 3S1NC 1EFWA 5C4XC 2XCOA 1I3QA 3GTKK 2KXYA 3HXAA 1VGXA 1TWHK 2GSUA 1DCOA 2XCQA 3OREA 5IYBK 3S1MC 3GTGK 3GTQA 1IW7A 3HOUC 3H0GA 3GEEA 1J6WA 1WCMC 5HL7S 1VLOA 1K83K 1TWAC 3S15C 4JK1A 1TWAA 4GTEA 4A3EK 4BXXC 4A3JK 5C3EC 2VUMA 5JVOA 4YG2A 4BY1K 3PO3K 4C3HC 3S14C 1BDFA 3CQZC 4OIRA 3M3YC 3NUHA 1I3QC 3K7AC 3RZOC 4OIQA 3LYWA 1O24A 2NVQK 4A3FC 3HOWC 2E2HA 2NVYK 2R7ZK 3S16C 5M5WK 1EI6A 1IE0A 3JSTA 2PHCB 3SZYA 5C44K 4Q5SA 4KMDA 2Y0SD 4A3EC 4KDDA 1JQWA 1Y1WA 3M4OK 4LK1A 1USOA 4PABA 3GTPC 4P9SA 4KM9A 3GTPA 1O2AA 4WILA 5IP9C 1F7UA 2P5MA 4LLGA 4GT9A 3LAJA 4OIOA 2CFAB 3A8IA 2Y3PA 1Y1VK 2NVTK 5FJ8K 3AH5A 2JA5C 2A69A 4C2MC 4C3IC 3S2HC 5M3MK 2E2JC 3I4MK 1PJ5A 5C4JC 3T02A 5IYDK 5IOQA 1WOOA 3BUEA 2EBBA 3S15K 3WODA 2W7VA 4BXXK 2FQTA 1O2BA 2JA8K 2R7ZA 4GTCA 1YNNA 4KB2A 4BBSK 3N0BA 1WOSA 2RH6A 3GTQC 2PA8L 1Y1WC 1X31C 4A3MK 3GTKC 1V5VA 5C4XK 2V6UA 3T01A 4FM9A 1WQGA 4WCES 1XXAA 4LQYA 4P5BA 3GTOK 1ZVUA 1O27A 2P8TA 3FKIA 1B4BA
chains in the Genus database with same CATH topology
4NOIA 1TWFK 4A3CC 2NVYC 4YFKA 1TWGC 4QIWD 2PMZD 5C4XC 2Y0SL 5FLMK 3CQZK 2CW0A 3HOVC 3S2DK 4KN7A 2NVQC 5M5YK 3I4NC 5M3FK 4A3FK 3H0GC 4C3HK 1TWHK 1TWFC 4OIPA 2R92C 4XLNA 5IYCC 1R9TC 2BE5A 3M3YK 4X6AC 4XSZA 3S1MC 5IYBK 1K83C 1IW7A 3GTGK 3I4NK 3HOUC 4Y52C 3PO3C 3GTQK 3HOVK 2JA6K 1I6HC 2A6HA 2JA8C 2WAQL 4A3KK 2E2IK 1R9TK 3GTMK 1WCMC 3GTJK 1K83K 1TWHC 1TWAC 3S15C 4JK1A 4A3EK 4A3JK 4BXXC 5C3EC 3S1QC 4Y7NC 3PO2K 4A93C 3EQLA 4A3GK 3S1RC 4A3MC 4YG2A 5M5XK 4BY1K 3GTJC 2E2HK 3PO3K 4C3HC 3S14C 1SFOC 4A3BK 4BBRK 1BDFA 3CQZC 4ZH4A 3GTOC 1TWCK 4OIRA 1XPPA 4C3JK 3M3YC 3H3VL 4A3DC 4YFXA 2YU9K 3S1MK 1I3QC 3K7AC 4YFNA 3RZOC 3S2DC 1TWGK 3FKIC 4OIQA 5IYCK 2JA7C 2A68A 2R92K 3GTLK 3HOZC 2NVQK 1TWCC 4A3FC 4LK0A 4LJZA 3HOWC 3S17K 2YU9C 3S14K 3HOYK 5FLMC 2NVYK 3RZDC 3S16C 3GTMC 5M5WK 2R7ZK 2O5IA 2R93C 4GZYA 2VUMK 5C44K 4Q5SA 3HOXC 2Y0SD 4A3EC 2JA7K 4Q4ZA 5IP7C 2O5JA 4A3IK 4AYBD 4Y7NK 4KMUA 3M4OK 4LK1A 4G7OA 4C3JC 2PMZL 5C44C 3H0GK 4OINA 5IYDC 4G7ZA 3GTPC 4QIWL 3HOXK 4BY7K 1YNJA 3HOUK 1SMYA 4G7HA 2WB1L 2B63K 1I6VA 4MEYA 4BY1C 5IP9C 4A3LK 1I6HK 4QJVB 3S2HK 3HOWK 2A6EA 3GTPK 4LLGA 3H3VD 3HOZK 4OIOA 5C4JK 2R93K 2JA5K 1Y1VC 2NVTC 4MEXA 3HKZD 5IP9K 1Y1WK 4XSXA 1SFOK 2E2JK 4X6AK 1Y1VK 1ZYRA 3HOYC 2NVTK 4XLPA 1I3QK 3K7AK 5FJ8K 4A3IC 5IP7K 3FKIK 3RZOK 3S1NK 2JA5C 2A69A 2WAQD 4C2MC 4C3IC 3HKZL 3GTKK 3S2HC 5M3MK 2NVXC 2JA6C 2E2JC 2R7ZC 1HQMA 2E2IC 3RZDK 3M4OC 2B63C 4A3LC 1I50C 3I4MK 2WB1D 3S16K 5C4JC 3S17C 4A93K 3S1RK 5IYDK 5IYBC 5D4DA 3GTGC 4BBSC 4KN4A 4BY7C 4C3IK 3WODA 3S15K 2E2HC 4BXXK 4MQ9A 5TMFA 4A3GC 2PPBA 2JA8K 5TMCA 1I50K 1WCMK 3DXJA 4A3DK 1YNNA 4BBSK 2NVXK 1TWAK 4A3BC 4BBRC 3GTQC 4Y52K 3I4MC 4A3KC 2PA8L 4C2MK 1Y1WC 4A3MK 3GTKC 5C4XK 4A3CK 3PO2C 5C3EK 3S1QK 2PA8D 4A3JC 3GTLC 3S1NC 3GTOK 2VUMC 4AYBL 4QJVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NOI A;  1TWF K;  4A3C C;  2NVY C;  4YFK A;  1TWG C;  4QIW D;  2PMZ D;  5C4X C;  2Y0S L;  5FLM K;  3CQZ K;  2CW0 A;  3HOV C;  3S2D K;  4KN7 A;  2NVQ C;  5M5Y K;  3I4N C;  5M3F K;  4A3F K;  3H0G C;  4C3H K;  1TWH K;  1TWF C;  4OIP A;  2R92 C;  4XLN A;  5IYC C;  1R9T C;  2BE5 A;  3M3Y K;  4X6A C;  4XSZ A;  3S1M C;  5IYB K;  1K83 C;  1IW7 A;  3GTG K;  3I4N K;  3HOU C;  4Y52 C;  3PO3 C;  3GTQ K;  3HOV K;  2JA6 K;  1I6H C;  2A6H A;  2JA8 C;  2WAQ L;  4A3K K;  2E2I K;  1R9T K;  3GTM K;  1WCM C;  3GTJ K;  1K83 K;  1TWH C;  1TWA C;  3S15 C;  4JK1 A;  4A3E K;  4A3J K;  4BXX C;  5C3E C;  3S1Q C;  4Y7N C;  3PO2 K;  4A93 C;  3EQL A;  4A3G K;  3S1R C;  4A3M C;  4YG2 A;  5M5X K;  4BY1 K;  3GTJ C;  2E2H K;  3PO3 K;  4C3H C;  3S14 C;  1SFO C;  4A3B K;  4BBR K;  1BDF A;  3CQZ C;  4ZH4 A;  3GTO C;  1TWC K;  4OIR A;  1XPP A;  4C3J K;  3M3Y C;  3H3V L;  4A3D C;  4YFX A;  2YU9 K;  3S1M K;  1I3Q C;  3K7A C;  4YFN A;  3RZO C;  3S2D C;  1TWG K;  3FKI C;  4OIQ A;  5IYC K;  2JA7 C;  2A68 A;  2R92 K;  3GTL K;  3HOZ C;  2NVQ K;  1TWC C;  4A3F C;  4LK0 A;  4LJZ A;  3HOW C;  3S17 K;  2YU9 C;  3S14 K;  3HOY K;  5FLM C;  2NVY K;  3RZD C;  3S16 C;  3GTM C;  5M5W K;  2R7Z K;  2O5I A;  2R93 C;  4GZY A;  2VUM K;  5C44 K;  4Q5S A;  3HOX C;  2Y0S D;  4A3E C;  2JA7 K;  4Q4Z A;  5IP7 C;  2O5J A;  4A3I K;  4AYB D;  4Y7N K;  4KMU A;  3M4O K;  4LK1 A;  4G7O A;  4C3J C;  2PMZ L;  5C44 C;  3H0G K;  4OIN A;  5IYD C;  4G7Z A;  3GTP C;  4QIW L;  3HOX K;  4BY7 K;  1YNJ A;  3HOU K;  1SMY A;  4G7H A;  2WB1 L;  2B63 K;  1I6V A;  4MEY A;  4BY1 C;  5IP9 C;  4A3L K;  1I6H K;  4QJV B;  3S2H K;  3HOW K;  2A6E A;  3GTP K;  4LLG A;  3H3V D;  3HOZ K;  4OIO A;  5C4J K;  2R93 K;  2JA5 K;  1Y1V C;  2NVT C;  4MEX A;  3HKZ D;  5IP9 K;  1Y1W K;  4XSX A;  1SFO K;  2E2J K;  4X6A K;  1Y1V K;  1ZYR A;  3HOY C;  2NVT K;  4XLP A;  1I3Q K;  3K7A K;  5FJ8 K;  4A3I C;  5IP7 K;  3FKI K;  3RZO K;  3S1N K;  2JA5 C;  2A69 A;  2WAQ D;  4C2M C;  4C3I C;  3HKZ L;  3GTK K;  3S2H C;  5M3M K;  2NVX C;  2JA6 C;  2E2J C;  2R7Z C;  1HQM A;  2E2I C;  3RZD K;  3M4O C;  2B63 C;  4A3L C;  1I50 C;  3I4M K;  2WB1 D;  3S16 K;  5C4J C;  3S17 C;  4A93 K;  3S1R K;  5IYD K;  5IYB C;  5D4D A;  3GTG C;  4BBS C;  4KN4 A;  4BY7 C;  4C3I K;  3WOD A;  3S15 K;  2E2H C;  4BXX K;  4MQ9 A;  5TMF A;  4A3G C;  2PPB A;  2JA8 K;  5TMC A;  1I50 K;  1WCM K;  3DXJ A;  4A3D K;  1YNN A;  4BBS K;  2NVX K;  1TWA K;  4A3B C;  4BBR C;  3GTQ C;  4Y52 K;  3I4M C;  4A3K C;  2PA8 L;  4C2M K;  1Y1W C;  4A3M K;  3GTK C;  5C4X K;  4A3C K;  3PO2 C;  5C3E K;  3S1Q K;  2PA8 D;  4A3J C;  3GTL C;  3S1N C;  3GTO K;  2VUM C;  4AYB L;  4QJV A; 
#chains in the Genus database with same CATH topology
 5EGE A;  4A3C C;  2NVY C;  1TWG C;  3S2D K;  2CW0 A;  2XCR B;  4KN7 A;  1TWF C;  4OIP A;  3A8J A;  2R93 A;  4X6A C;  4AH6 A;  1K83 C;  4O2D A;  3I4N K;  4KAS A;  3GTQ K;  3PO3 C;  3GTG A;  2JA6 K;  3GTM K;  5IOR A;  2RGR A;  1PJ6 A;  5L46 A;  4Y7N C;  3BP8 C;  4A93 C;  4BKW A;  1I50 A;  3S1R C;  4A3G K;  5CJ9 A;  2FQO A;  3PIP S;  2E2H K;  4XCH A;  2ZJP S;  1DCP A;  4A3B K;  4WF9 S;  4C3J K;  3H3V L;  1C0A A;  4YFX A;  1WIH A;  3S1M K;  3OEP A;  1ZXO A;  1XZQ A;  3GTL K;  5DM6 S;  1YCL A;  2V6T A;  2YU9 C;  5FLM C;  3V4G A;  1BS2 A;  3GTM C;  2R93 C;  4KB4 A;  2VUM K;  3GTJ A;  3PIO S;  4GTB A;  4KMU A;  2JA5 A;  3H0G K;  3ERE D;  4G7Z A;  1VRQ C;  3TTG A;  5EGH A;  1YNJ A;  4WFA S;  1R9T A;  3ADA C;  2WB1 L;  2E2I A;  4BY1 C;  2B63 A;  4QJV B;  3HOW K;  1WOP A;  3H3V D;  2JA5 K;  4P5A A;  1Y1V C;  2NVT C;  4MEX A;  4GTL A;  2R92 A;  4C45 A;  1SFO K;  2E2J K;  5HQH A;  1EK8 A;  4G0V A;  4G0U A;  2ZJQ S;  1EQR A;  4XLP A;  3L4K A;  4KMA A;  4GTD A;  4J3N A;  4WFB S;  2JA6 C;  5HL8 A;  1HQM A;  3RZD K;  3M4O C;  2V6S A;  1O2F B;  3S17 C;  5D4D A;  4BBS C;  4RMF A;  1WCM A;  2ZFZ A;  4LR2 A;  4A3G C;  2PPB A;  5TMC A;  1I50 K;  5CHP A;  4GTF A;  2NVX K;  4A3B C;  4Y52 K;  2GSO A;  1UV7 A;  3S0X A;  4A3K C;  4C2M K;  3T00 A;  4A3C K;  3PO2 C;  3S1Q K;  2PA8 D;  3GTL C;  3VA7 A;  1AB4 A;  5JVG S;  4NOI A;  3LPX A;  2GSN A;  1TWF K;  5FLM K;  2Y0S L;  5M5Y K;  3I4N C;  2GAG C;  2L3U A;  2R92 C;  4XLN A;  2CFA A;  5IYC C;  4XSZ A;  1B4A A;  4KAT A;  4Y52 C;  3HOV K;  4IOA S;  2WAQ L;  2A6H A;  2JA8 C;  4A3K K;  2E2I K;  1R9T K;  3BP3 A;  4FZB A;  1DD5 A;  3EQL A;  1J98 A;  3IPJ A;  4A3M C;  5M5X K;  3GTJ C;  1KQ4 A;  3Q3Q A;  1SFO C;  4BBR K;  3GTO C;  4A3D C;  2YU9 K;  4YFN A;  3S2D C;  1TWG K;  3CF5 S;  3DLL S;  5IYC K;  1WQF A;  2A68 A;  1F9N A;  1TWC A;  3HOZ C;  4GTA A;  1TWC C;  4LK0 A;  3HOY K;  3RZD C;  1Y1V A;  4GZY A;  1USM A;  1VJE A;  3A8K A;  2JA7 K;  1BGW A;  1J6V A;  2O5J A;  3AQO A;  4Y7N K;  4C3J C;  5JVH S;  4OIN A;  3HOX K;  5IOS A;  4BY7 K;  3G4A A;  1SMY A;  1I6H K;  2B63 K;  1I6V A;  4MEY A;  3LAP A;  4A3L K;  2JA6 A;  1F93 A;  1EH1 A;  1O29 A;  3TFJ A;  3HOZ K;  4KMH A;  2R93 K;  3CQZ A;  3AD8 C;  3HKZ D;  2ZJR S;  1TWF A;  3GEI A;  1WQH A;  3G4C A;  1F7V A;  4XSX A;  1GE9 A;  3AD9 C;  4KAR A;  4X6A K;  1L0W A;  2NVY A;  3FKI K;  2L5N A;  3S1N K;  1JVI A;  3GTO A;  3GTL A;  2NVX A;  3HKZ L;  2NVX C;  2E2I C;  2B63 C;  4A3L C;  1I50 C;  4A93 K;  2WB1 D;  4G0W A;  3S1R K;  5IYB C;  3GTG C;  1INN A;  2E2H C;  5TMF A;  1PJ7 A;  4U67 S;  3DXJ A;  1WCM K;  2KWA A;  4KAW X;  1TWA K;  3SZZ A;  4BBR C;  3N3Y A;  3GSI A;  3GTM A;  1IL2 A;  2YU9 A;  3N0C A;  3GEH A;  5C3E K;  1O26 A;  3TFI A;  1YX2 A;  4WJ4 A;  2VUM C;  3L4J A;  4AYB L;  4QJV A;  4BLA A;  2R92 K;  4YFK A;  4QIW D;  2PMZ D;  3CQZ K;  3HOV C;  3GIR A;  2NVQ C;  5M3F K;  1SFO A;  4A3F K;  3H0G C;  4C3H K;  3OPF A;  1RU0 A;  1R9T C;  2BE5 A;  3AD7 C;  3M3Y K;  2KQ1 A;  1J6X A;  1I6H C;  1HI9 A;  3GTJ K;  1TWH C;  3AQP A;  3S1Q C;  1JOE A;  3GDZ A;  3PO2 K;  4PAA A;  4BLB A;  4GFQ A;  4KC6 A;  2D6F C;  4ZH4 A;  1XPP A;  1TWC K;  3FOF A;  1TWG A;  2GAH C;  3FKI C;  2ZUE A;  2JA7 C;  2ZUF A;  5JFE A;  1G51 A;  4LJZ A;  4IO9 S;  3S17 K;  3S14 K;  4WFN S;  4DDQ A;  2O5I A;  3HOX C;  4KM8 A;  4Q4Z A;  5IP7 C;  1O28 A;  1VH2 A;  4AYB D;  5E68 A;  4A3I K;  2JH3 A;  4G7O A;  2PMZ L;  5C44 C;  4QIW L;  5IYD C;  1IBA A;  3HOU K;  3FHZ A;  4G7H A;  5TJ3 A;  3CAG A;  3S2H K;  4M1X A;  2A6E A;  3TFH A;  3GTP K;  5C4J K;  3MML B;  1O25 A;  1WSV A;  5IP9 K;  1Y1W K;  1XXC A;  1ISE A;  1TWH A;  3FOE A;  1ZQ1 C;  1ZYR A;  3HOY C;  1WOR A;  2KPU A;  1I3Q K;  3K7A K;  3RZO K;  3GTK A;  4A3I C;  4ILD A;  5IP7 K;  1IS1 A;  2WAQ D;  4LOW A;  1DCH A;  3QX3 A;  2R7Z C;  3S16 K;  1XXB A;  5DM7 S;  2JA7 A;  1FEU A;  1XZP A;  4C3I K;  4KN4 A;  4BY7 C;  4IOC S;  4MQ9 A;  1WSR A;  4A3D K;  1XZP B;  1ZBS A;  1XZQ B;  3I4M C;  1K83 A;  4WJ3 M;  1BJT A;  5IOT A;  4A3J C;  1IQ0 A;  3S1N C;  1EFW A;  5C4X C;  2XCO A;  1I3Q A;  3GTK K;  2KXY A;  3HXA A;  1VGX A;  1TWH K;  2GSU A;  1DCO A;  2XCQ A;  3ORE A;  5IYB K;  3S1M C;  3GTG K;  3GTQ A;  1IW7 A;  3HOU C;  3H0G A;  3GEE A;  1J6W A;  1WCM C;  5HL7 S;  1VLO A;  1K83 K;  1TWA C;  3S15 C;  4JK1 A;  1TWA A;  4GTE A;  4A3E K;  4BXX C;  4A3J K;  5C3E C;  2VUM A;  5JVO A;  4YG2 A;  4BY1 K;  3PO3 K;  4C3H C;  3S14 C;  1BDF A;  3CQZ C;  4OIR A;  3M3Y C;  3NUH A;  1I3Q C;  3K7A C;  3RZO C;  4OIQ A;  3LYW A;  1O24 A;  2NVQ K;  4A3F C;  3HOW C;  2E2H A;  2NVY K;  2R7Z K;  3S16 C;  5M5W K;  1EI6 A;  1IE0 A;  3JST A;  2PHC B;  3SZY A;  5C44 K;  4Q5S A;  4KMD A;  2Y0S D;  4A3E C;  4KDD A;  1JQW A;  1Y1W A;  3M4O K;  4LK1 A;  1USO A;  4PAB A;  3GTP C;  4P9S A;  4KM9 A;  3GTP A;  1O2A A;  4WIL A;  5IP9 C;  1F7U A;  2P5M A;  4LLG A;  4GT9 A;  3LAJ A;  4OIO A;  2CFA B;  3A8I A;  2Y3P A;  1Y1V K;  2NVT K;  5FJ8 K;  3AH5 A;  2JA5 C;  2A69 A;  4C2M C;  4C3I C;  3S2H C;  5M3M K;  2E2J C;  3I4M K;  1PJ5 A;  5C4J C;  3T02 A;  5IYD K;  5IOQ A;  1WOO A;  3BUE A;  2EBB A;  3S15 K;  3WOD A;  2W7V A;  4BXX K;  2FQT A;  1O2B A;  2JA8 K;  2R7Z A;  4GTC A;  1YNN A;  4KB2 A;  4BBS K;  3N0B A;  1WOS A;  2RH6 A;  3GTQ C;  2PA8 L;  1Y1W C;  1X31 C;  4A3M K;  3GTK C;  1V5V A;  5C4X K;  2V6U A;  3T01 A;  4FM9 A;  1WQG A;  4WCE S;  1XXA A;  4LQY A;  4P5B A;  3GTO K;  1ZVU A;  1O27 A;  2P8T A;  3FKI A;  1B4B A; 
#chains in the Genus database with same CATH homology
 4NOI A;  1TWF K;  4A3C C;  2NVY C;  4YFK A;  1TWG C;  4QIW D;  2PMZ D;  5C4X C;  2Y0S L;  5FLM K;  3CQZ K;  2CW0 A;  3HOV C;  3S2D K;  4KN7 A;  2NVQ C;  5M5Y K;  3I4N C;  5M3F K;  4A3F K;  3H0G C;  4C3H K;  1TWH K;  1TWF C;  4OIP A;  2R92 C;  4XLN A;  5IYC C;  1R9T C;  2BE5 A;  3M3Y K;  4X6A C;  4XSZ A;  3S1M C;  5IYB K;  1K83 C;  1IW7 A;  3GTG K;  3I4N K;  3HOU C;  4Y52 C;  3PO3 C;  3GTQ K;  3HOV K;  2JA6 K;  1I6H C;  2A6H A;  2JA8 C;  2WAQ L;  4A3K K;  2E2I K;  1R9T K;  3GTM K;  1WCM C;  3GTJ K;  1K83 K;  1TWH C;  1TWA C;  3S15 C;  4JK1 A;  4A3E K;  4A3J K;  4BXX C;  5C3E C;  3S1Q C;  4Y7N C;  3PO2 K;  4A93 C;  3EQL A;  4A3G K;  3S1R C;  4A3M C;  4YG2 A;  5M5X K;  4BY1 K;  3GTJ C;  2E2H K;  3PO3 K;  4C3H C;  3S14 C;  1SFO C;  4A3B K;  4BBR K;  1BDF A;  3CQZ C;  4ZH4 A;  3GTO C;  1TWC K;  4OIR A;  1XPP A;  4C3J K;  3M3Y C;  3H3V L;  4A3D C;  4YFX A;  2YU9 K;  3S1M K;  1I3Q C;  3K7A C;  4YFN A;  3RZO C;  3S2D C;  1TWG K;  3FKI C;  4OIQ A;  5IYC K;  2JA7 C;  2A68 A;  2R92 K;  3GTL K;  3HOZ C;  2NVQ K;  1TWC C;  4A3F C;  4LK0 A;  4LJZ A;  3HOW C;  3S17 K;  2YU9 C;  3S14 K;  3HOY K;  5FLM C;  2NVY K;  3RZD C;  3S16 C;  3GTM C;  5M5W K;  2R7Z K;  2O5I A;  2R93 C;  4GZY A;  2VUM K;  5C44 K;  4Q5S A;  3HOX C;  2Y0S D;  4A3E C;  2JA7 K;  4Q4Z A;  5IP7 C;  2O5J A;  4A3I K;  4AYB D;  4Y7N K;  4KMU A;  3M4O K;  4LK1 A;  4G7O A;  4C3J C;  2PMZ L;  5C44 C;  3H0G K;  4OIN A;  5IYD C;  4G7Z A;  3GTP C;  4QIW L;  3HOX K;  4BY7 K;  1YNJ A;  3HOU K;  1SMY A;  4G7H A;  2WB1 L;  2B63 K;  1I6V A;  4MEY A;  4BY1 C;  5IP9 C;  4A3L K;  1I6H K;  4QJV B;  3S2H K;  3HOW K;  2A6E A;  3GTP K;  4LLG A;  3H3V D;  3HOZ K;  4OIO A;  5C4J K;  2R93 K;  2JA5 K;  1Y1V C;  2NVT C;  4MEX A;  3HKZ D;  5IP9 K;  1Y1W K;  4XSX A;  1SFO K;  2E2J K;  4X6A K;  1Y1V K;  1ZYR A;  3HOY C;  2NVT K;  4XLP A;  1I3Q K;  3K7A K;  5FJ8 K;  4A3I C;  5IP7 K;  3FKI K;  3RZO K;  3S1N K;  2JA5 C;  2A69 A;  2WAQ D;  4C2M C;  4C3I C;  3HKZ L;  3GTK K;  3S2H C;  5M3M K;  2NVX C;  2JA6 C;  2E2J C;  2R7Z C;  1HQM A;  2E2I C;  3RZD K;  3M4O C;  2B63 C;  4A3L C;  1I50 C;  3I4M K;  2WB1 D;  3S16 K;  5C4J C;  3S17 C;  4A93 K;  3S1R K;  5IYD K;  5IYB C;  5D4D A;  3GTG C;  4BBS C;  4KN4 A;  4BY7 C;  4C3I K;  3WOD A;  3S15 K;  2E2H C;  4BXX K;  4MQ9 A;  5TMF A;  4A3G C;  2PPB A;  2JA8 K;  5TMC A;  1I50 K;  1WCM K;  3DXJ A;  4A3D K;  1YNN A;  4BBS K;  2NVX K;  1TWA K;  4A3B C;  4BBR C;  3GTQ C;  4Y52 K;  3I4M C;  4A3K C;  2PA8 L;  4C2M K;  1Y1W C;  4A3M K;  3GTK C;  5C4X K;  4A3C K;  3PO2 C;  5C3E K;  3S1Q K;  2PA8 D;  4A3J C;  3GTL C;  3S1N C;  3GTO K;  2VUM C;  4AYB L;  4QJV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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