3GTKC

Backtracked rna polymerase ii complex with 18mer rna
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 53
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtkC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtkC01
3S1QC 4C3JC 1K83C 3HOXC 2WB1L 3S1MC 2R7ZK 5M5WK 3K7AC 1I50C 5C44C 4A3KC 3RZOC 4A93C 4G7HA 3FKIK 2B63K 2NVQK 4OIQA 2VUMC 1TWHC 1IW7A 2PA8D 4AYBL 2JA8C 3GTLK 4QIWD 4BXXK 1R9TC 3S17K 4C3IK 3PO3C 1I6VA 3HOUK 5IYBC 3GTOC 3S15C 3I4NK 1I3QK 4A3IK 5FLMK 4KN7A 4YFNA 1TWFK 3GTKC 4KMUA 4BY1C 4Y52C 4BBSC 4A3CC 5IYCK 3HOZC 2YU9K 4A3MC 2R92K 1SFOC 2WAQL 2CW0A 4A3BC 2NVXC 3S1QK 3HOVK 1K83K 3HOXK 4A3JC 4BBRC 3RZDC 3HOWC 3K7AK 5C4XC 1I50K 5C44K 4A3KK 2A68A 3GTPC 3M3YC 1BDFA 3S14C 2VUMK 4LK1A 2R93C 2JA8K 5IYDC 4Q4ZA 3S1NC 1R9TK 4QJVA 2JA6K 1WCMC 1TWAC 2Y0SD 1YNNA 2O5JA 5IYBK 3GTOK 3S15K 4OIOA 3GTKK 4A3CK 4Y52K 4XSXA 4BBSK 3CQZC 2A69A 4OIPA 4LLGA 4C3HC 4JK1A 2PMZD 3S2HC 1I6HC 4A3MK 1SFOK 5C3EC 2NVXK 3GTJC 4A3BK 2O5IA 3GTGC 5IP7K 4A3JK 3H3VL 2WB1D 3RZDK 3HOWK 4NOIA 4XLPA 3S1RC 4Y7NC 2NVYK 3PO2C 5C4XK 1TWCC 4C2MC 2JA7C 3S2DC 3GTPK 3M3YK 3S14K 2E2HC 4C3JK 2E2JC 3S1MK 2R93K 4ZH4A 3S16C 3DXJA 4AYBD 4A3EC 3RZOK 2PPBA 3HKZL 3S1NK 4A93K 3GTQC 1WCMK 4BY7C 1TWHK 4OINA 2BE5A 3GTMC 4G7OA 1TWGC 4A3FC 3H0GC 5M3MK 3PO3K 2B63C 2NVQC 4A3LC 3CQZK 5IP9C 4C3HK 3S2HK 1I6HK 4QJVB 2WAQD 2JA5C 3GTJK 4YFKA 1Y1WC 3GTGK 4MQ9A 3GTLC 4X6AC 4BY1K 3S1RK 3HOZK 4A3GC 3PO2K 1ZYRA 1TWCK 4C2MK 2JA7K 3S2DK 2E2IC 2PA8L 2E2HK 3I4MC 5C4JC 2NVTC 3I4NC 4GZYA 1XPPA 4QIWL 4BBRK 3S16K 1Y1VC 4G7ZA 3HOYC 4A3EK 3GTQK 4BY7K 2A6EA 5TMCA 3HOVC 3GTMK 1YNJA 5IYDK 1TWGK 3M4OC 3EQLA 3H0GK 4A3FK 2A6HA 5D4DA 4A3LK 1TWAK 1SMYA 4LJZA 4A3DC 5IP9K 2JA5K 1HQMA 2R7ZC 1Y1WK 4X6AK 2JA6C 4KN4A 3H3VD 3FKIC 5M5YK 4Q5SA 5FJ8K 4A3GK 2E2IK 3WODA 5TMFA 5C3EK 5M5XK 5C4JK 2NVTK 4MEXA 5M3FK 3I4MK 1Y1VK 4BXXC 3HOYK 4Y7NK 3S17C 2Y0SL 4XSZA 4C3IC 3HOUC 3HKZD 4MEYA 1I3QC 2E2JK 4A3IC 4LK0A 4YFXA 5FLMC 1TWFC 4YG2A 5IP7C 4XLNA 3M4OK 4OIRA 5IYCC 2NVYC 2PMZL 2YU9C 2R92C 4A3DK
chains in the Genus database with same CATH superfamily
3CAGA 5JVOA 5C44C 2B63K 4G7HA 3LPXA 4AYBL 1R9TC 1WSVA 4C3IK 3HOUK 5IYBC 2GAHC 3S15C 3A8KA 2Y3PA 3TFIA 4A3IK 1JOEA 1TWFK 1O24A 3HXAA 2WAQL 1K83K 4BBRC 3SZZA 4AH6A 3RZDC 4M1XA 1I50K 4A3KK 3GTPC 3TFHA 4GTBA 4KMAA 5IYDC 4KATA 2JA6K 2O5JA 1O25A 5IOQA 1EFWA 4Y52K 2YU9A 4BBSK 2R92A 1XZQB 1WOOA 1VGXA 2A69A 3OREA 1I6HC 2NVXK 5C3EC 2O5IA 1XXCA 2NVYK 3PO2C 4BLBA 2E2JC 3S1MK 1R9TA 3S16C 4AYBD 4A3EC 3S1NK 3BP8C 4A93K 1J6XA 5CJ9A 4BY7C 1DCHA 5JVGS 1TWHK 3AH5A 4G7OA 2KQ1A 3VA7A 2EBBA 2B63C 3CQZK 4C3HK 2WAQD 3N0CA 3GTGK 4X6AC 3GTPA 3HOZK 2ZJQS 2JA7K 1BJTA 4WJ4A 3I4MC 4QIWL 1Y1VC 1X31C 5EGEA 3ERED 2KXYA 1WSRA 1TWGK 4KMHA 3H0GK 4A3FK 2XCOA 1TWAK 1IS1A 2JA5K 3TFJA 2CFAB 3FOFA 4P9SA 3LAPA 2JA6C 4WFNS 5FJ8K 3FKIC 1FEUA 3ADAC 5M3FK 4BXXC 3AD9C 3HOYK 2Y0SL 3GDZA 2JH3A 4LK0A 4YG2A 2V6UA 3V4GA 2B63A 4OIRA 2NVYC 3AD7C 3L4JA 4KASA 3S1QC 3GEIA 2R7ZK 4GT9A 3S1MC 1XZPA 3GSIA 4A93C 2NVQK 4OIQA 2VUMC 2L5NA 1TWHC 1IW7A 1Y1VA 4GTEA 3AD8C 4QIWD 1I6VA 1WQGA 3GTOC 1K83A 1I3QK 5FLMK 4YFNA 1BGWA 1JVIA 2GSNA 4KMUA 4LOWA 4A3CC 1UV7A 3HOZC 3SZYA 5IOSA 1SFOC 4O2DA 2CW0A 1GE9A 5CHPA 3HOXK 4A3JC 2JA6A 3FKIA 3K7AK 3HOWC 2KWAA 2A68A 1PJ5A 3S14C 1J98A 5DM6S 2R93C 2JA8K 3N0BA 4LQYA 4Q4ZA 4QJVA 3IPJA 1TWAC 2Y0SD 1YNNA 4WCES 2P8TA 3GTKK 2NVYA 4XSXA 4PAAA 4A3MK 4OIPA 4LLGA 4JK1A 3S2HC 4A3BK 4KARA 3BP3A 4KM9A 3AQPA 3H3VL 3S1RC 5C4XK 4GFQA 2VUMA 3M3YK 1TWHA 1O28A 3BUEA 1J6VA 4C3JK 2ZUFA 4IOCS 3QX3A 1VH2A 3HKZL 2P5MA 3GTQC 1B4BA 1WCMK 4BKWA 3TTGA 3GTOA 1RU0A 4OINA 1B4AA 2PHCB 1SFOA 3PO3K 2NVQC 1O27A 2ZUEA 5IP9C 1ZXOA 3GTJK 3N3YA 4YFKA 1Y1WC 2ZFZA 1ZYRA 1TWCK 4C2MK 3S2DK 2E2IC 2PA8L 2E2HK 2R93A 5C4JC 1WORA 4GZYA 5IOTA 4G7ZA 1TWAA 3GEEA 5TMCA 3S0XA 1BS2A 3DLLS 1EI6A 3GTMK 1ZQ1C 3M4OC 3L4KA 2A6HA 5HL8A 2W7VA 4A3LK 1SMYA 4LJZA 1HQMA 2RH6A 4P5AA 4KMDA 4A3GK 3H3VD 1ZBSA 4GTCA 5HL7S 5M5XK 2NVTK 4MEXA 3GTQA 1DD5A 4C3IC 1F7VA 3HOUC 3HKZD 2GAGC 2V6SA 4A3IC 4YFXA 1TWFC 1VRQC 4A3DK 1EH1A 1O29A 1Y1WA 4C3JC 3FOEA 1K83C 1O2BA 2WB1L 3G4CA 2FQTA 2V6TA 1J6WA 1I50C 4A3KC 2E2IA 2PA8D 1XZQA 3GTLK 3S17K 3PO3C 5EGHA 3I4NK 4Y52C 4BBSC 5IYCK 1IE0A 1O2AA 5L46A 3FHZA 2YU9K 2R92K 2NVXC 4KDDA 5C44K 1F9NA 1HI9A 1V5VA 3GEHA 1BDFA 4LK1A 3S1NC 1R9TK 1C0AA 1ISEA 5IYBK 3PIPS 3S15K 4WFAS 1TWFA 2GSUA 4OIOA 1KQ4A 1INNA 1IQ0A 1USOA 3CQZC 4C3HC 3T01A 3GTGC 1I50A 2WB1D 3RZDK 4XLPA 1PJ7A 3GTPK 2JA7C 4PABA 1WOSA 4KAWX 3RZOK 2PPBA 2CFAA 1ZVUA 1VJEA 1TWGC 4A3FC 3H0GC 2XCRB 5M3MK 2NVXA 1I6HK 3AQOA 2JA5C 2ZJPS 4FM9A 4MQ9A 3CF5S 3GTLC 4BY1K 3PO2K 3T02A 1USMA 1IBAA 3I4NC 2L3UA 1XPPA 3S16K 4A3EK 3HOYC 4BY7K 2KPUA 2A6EA 1EK8A 1YNJA 4GTLA 3EQLA 3CQZA 4WF9S 5D4DA 3LYWA 3GTGA 2R7ZC 4G0VA 4X6AK 2JA7A 5M5YK 4KN4A 4DDQA 4Q5SA 4GTDA 1F7UA 5TMFA 3I4MK 1Y1VK 5HQHA 4Y7NK 4XSZA 5DM7S 4MEYA 1I3QC 1VLOA 1TWGA 5FLMC 4P5BA 3H0GA 4XCHA 4XLNA 1O2FB 2PMZL 4G0UA 2JA5A 2XCQA 3HOXC 3GTLA 5M5WK 3K7AC 3RZOC 3FKIK 3OEPA 3PIOS 3OPFA 2JA8C 4FZBA 4BXXK 1PJ6A 4WFBS 4KN7A 3GTKC 4BY1C 2RGRA 4A3MC 1L0WA 4A3BC 2GSOA 4KC6A 3S1QK 2R7ZA 3HOVK 1G51A 4LR2A 1DCPA 1XXBA 5C4XC 5E68A 3M3YC 2VUMK 1WQFA 3JSTA 1WCMC 1I3QA 1XZPB 3GTOK 5JFEA 4A3CK 4IO9S 1SFOK 2PMZD 4ILDA 3GTJC 1JQWA 5IP7K 4A3JK 3HOWK 3T00A 4NOIA 2FQOA 4Y7NC 1TWCC 4C2MC 3S2DC 3S14K 1IL2A 2E2HC 4KB4A 4KB2A 2R93K 3A8JA 4ZH4A 3DXJA 3NUHA 3MMLB 4U67S 3A8IA 4J3NA 3GTKA 3LAJA 2BE5A 3GTMC 4BLAA 4A3LC 3S2HK 4QJVB 1WOPA 1XXAA 1WQHA 3S1RK 4A3GC 4G0WA 1WIHA 2NVTC 1O26A 3GIRA 4BBRK 1AB4A 4C45A 5IORA 1WCMA 1YCLA 3GTQK 3G4AA 4GTFA 4IOAS 3Q3QA 3HOVC 5JVHS 5IYDK 4A3DC 5IP9K 3GTJA 2D6FC 1Y1WK 4KM8A 1TWCA 2E2HA 1F93A 5TJ3A 3WODA 2E2IK 5C3EK 5C4JK 4RMFA 2ZJRS 1EQRA 4WILA 3S17C 4GTAA 3GTMA 2E2JK 1YX2A 5IP7C 3M4OK 5IYCC 2YU9C 2R92C 1DCOA 4WJ3M
chains in the Genus database with same CATH topology
3S1QC 4C3JC 1K83C 3HOXC 2WB1L 3S1MC 2R7ZK 5M5WK 3K7AC 1I50C 5C44C 4A3KC 3RZOC 4A93C 4G7HA 3FKIK 2B63K 2NVQK 4OIQA 2VUMC 1TWHC 1IW7A 2PA8D 4AYBL 2JA8C 3GTLK 4QIWD 4BXXK 1R9TC 3S17K 4C3IK 3PO3C 1I6VA 3HOUK 5IYBC 3GTOC 3S15C 3I4NK 1I3QK 4A3IK 5FLMK 4KN7A 4YFNA 1TWFK 3GTKC 4KMUA 4BY1C 4Y52C 4BBSC 4A3CC 5IYCK 3HOZC 2YU9K 4A3MC 2R92K 1SFOC 2WAQL 2CW0A 4A3BC 2NVXC 3S1QK 3HOVK 1K83K 3HOXK 4A3JC 4BBRC 3RZDC 3HOWC 3K7AK 5C4XC 1I50K 5C44K 4A3KK 2A68A 3GTPC 3M3YC 1BDFA 3S14C 2VUMK 4LK1A 2R93C 2JA8K 5IYDC 4Q4ZA 3S1NC 1R9TK 4QJVA 2JA6K 1WCMC 1TWAC 2Y0SD 1YNNA 2O5JA 5IYBK 3GTOK 3S15K 4OIOA 3GTKK 4A3CK 4Y52K 4XSXA 4BBSK 3CQZC 2A69A 4OIPA 4LLGA 4C3HC 4JK1A 2PMZD 3S2HC 1I6HC 4A3MK 1SFOK 5C3EC 2NVXK 3GTJC 4A3BK 2O5IA 3GTGC 5IP7K 4A3JK 3H3VL 2WB1D 3RZDK 3HOWK 4NOIA 4XLPA 3S1RC 4Y7NC 2NVYK 3PO2C 5C4XK 1TWCC 4C2MC 2JA7C 3S2DC 3GTPK 3M3YK 3S14K 2E2HC 4C3JK 2E2JC 3S1MK 2R93K 4ZH4A 3S16C 3DXJA 4AYBD 4A3EC 3RZOK 2PPBA 3HKZL 3S1NK 4A93K 3GTQC 1WCMK 4BY7C 1TWHK 4OINA 2BE5A 3GTMC 4G7OA 1TWGC 4A3FC 3H0GC 5M3MK 3PO3K 2B63C 2NVQC 4A3LC 3CQZK 5IP9C 4C3HK 3S2HK 1I6HK 4QJVB 2WAQD 2JA5C 3GTJK 4YFKA 1Y1WC 3GTGK 4MQ9A 3GTLC 4X6AC 4BY1K 3S1RK 3HOZK 4A3GC 3PO2K 1ZYRA 1TWCK 4C2MK 2JA7K 3S2DK 2E2IC 2PA8L 2E2HK 3I4MC 5C4JC 2NVTC 3I4NC 4GZYA 1XPPA 4QIWL 4BBRK 3S16K 1Y1VC 4G7ZA 3HOYC 4A3EK 3GTQK 4BY7K 2A6EA 5TMCA 3HOVC 3GTMK 1YNJA 5IYDK 1TWGK 3M4OC 3EQLA 3H0GK 4A3FK 2A6HA 5D4DA 4A3LK 1TWAK 1SMYA 4LJZA 4A3DC 5IP9K 2JA5K 1HQMA 2R7ZC 1Y1WK 4X6AK 2JA6C 4KN4A 3H3VD 3FKIC 5M5YK 4Q5SA 5FJ8K 4A3GK 2E2IK 3WODA 5TMFA 5C3EK 5M5XK 5C4JK 2NVTK 4MEXA 5M3FK 3I4MK 1Y1VK 4BXXC 3HOYK 4Y7NK 3S17C 2Y0SL 4XSZA 4C3IC 3HOUC 3HKZD 4MEYA 1I3QC 2E2JK 4A3IC 4LK0A 4YFXA 5FLMC 1TWFC 4YG2A 5IP7C 4XLNA 3M4OK 4OIRA 5IYCC 2NVYC 2PMZL 2YU9C 2R92C 4A3DK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S1Q C;  4C3J C;  1K83 C;  3HOX C;  2WB1 L;  3S1M C;  2R7Z K;  5M5W K;  3K7A C;  1I50 C;  5C44 C;  4A3K C;  3RZO C;  4A93 C;  4G7H A;  3FKI K;  2B63 K;  2NVQ K;  4OIQ A;  2VUM C;  1TWH C;  1IW7 A;  2PA8 D;  4AYB L;  2JA8 C;  3GTL K;  4QIW D;  4BXX K;  1R9T C;  3S17 K;  4C3I K;  3PO3 C;  1I6V A;  3HOU K;  5IYB C;  3GTO C;  3S15 C;  3I4N K;  1I3Q K;  4A3I K;  5FLM K;  4KN7 A;  4YFN A;  1TWF K;  3GTK C;  4KMU A;  4BY1 C;  4Y52 C;  4BBS C;  4A3C C;  5IYC K;  3HOZ C;  2YU9 K;  4A3M C;  2R92 K;  1SFO C;  2WAQ L;  2CW0 A;  4A3B C;  2NVX C;  3S1Q K;  3HOV K;  1K83 K;  3HOX K;  4A3J C;  4BBR C;  3RZD C;  3HOW C;  3K7A K;  5C4X C;  1I50 K;  5C44 K;  4A3K K;  2A68 A;  3GTP C;  3M3Y C;  1BDF A;  3S14 C;  2VUM K;  4LK1 A;  2R93 C;  2JA8 K;  5IYD C;  4Q4Z A;  3S1N C;  1R9T K;  4QJV A;  2JA6 K;  1WCM C;  1TWA C;  2Y0S D;  1YNN A;  2O5J A;  5IYB K;  3GTO K;  3S15 K;  4OIO A;  3GTK K;  4A3C K;  4Y52 K;  4XSX A;  4BBS K;  3CQZ C;  2A69 A;  4OIP A;  4LLG A;  4C3H C;  4JK1 A;  2PMZ D;  3S2H C;  1I6H C;  4A3M K;  1SFO K;  5C3E C;  2NVX K;  3GTJ C;  4A3B K;  2O5I A;  3GTG C;  5IP7 K;  4A3J K;  3H3V L;  2WB1 D;  3RZD K;  3HOW K;  4NOI A;  4XLP A;  3S1R C;  4Y7N C;  2NVY K;  3PO2 C;  5C4X K;  1TWC C;  4C2M C;  2JA7 C;  3S2D C;  3GTP K;  3M3Y K;  3S14 K;  2E2H C;  4C3J K;  2E2J C;  3S1M K;  2R93 K;  4ZH4 A;  3S16 C;  3DXJ A;  4AYB D;  4A3E C;  3RZO K;  2PPB A;  3HKZ L;  3S1N K;  4A93 K;  3GTQ C;  1WCM K;  4BY7 C;  1TWH K;  4OIN A;  2BE5 A;  3GTM C;  4G7O A;  1TWG C;  4A3F C;  3H0G C;  5M3M K;  3PO3 K;  2B63 C;  2NVQ C;  4A3L C;  3CQZ K;  5IP9 C;  4C3H K;  3S2H K;  1I6H K;  4QJV B;  2WAQ D;  2JA5 C;  3GTJ K;  4YFK A;  1Y1W C;  3GTG K;  4MQ9 A;  3GTL C;  4X6A C;  4BY1 K;  3S1R K;  3HOZ K;  4A3G C;  3PO2 K;  1ZYR A;  1TWC K;  4C2M K;  2JA7 K;  3S2D K;  2E2I C;  2PA8 L;  2E2H K;  3I4M C;  5C4J C;  2NVT C;  3I4N C;  4GZY A;  1XPP A;  4QIW L;  4BBR K;  3S16 K;  1Y1V C;  4G7Z A;  3HOY C;  4A3E K;  3GTQ K;  4BY7 K;  2A6E A;  5TMC A;  3HOV C;  3GTM K;  1YNJ A;  5IYD K;  1TWG K;  3M4O C;  3EQL A;  3H0G K;  4A3F K;  2A6H A;  5D4D A;  4A3L K;  1TWA K;  1SMY A;  4LJZ A;  4A3D C;  5IP9 K;  2JA5 K;  1HQM A;  2R7Z C;  1Y1W K;  4X6A K;  2JA6 C;  4KN4 A;  3H3V D;  3FKI C;  5M5Y K;  4Q5S A;  5FJ8 K;  4A3G K;  2E2I K;  3WOD A;  5TMF A;  5C3E K;  5M5X K;  5C4J K;  2NVT K;  4MEX A;  5M3F K;  3I4M K;  1Y1V K;  4BXX C;  3HOY K;  4Y7N K;  3S17 C;  2Y0S L;  4XSZ A;  4C3I C;  3HOU C;  3HKZ D;  4MEY A;  1I3Q C;  2E2J K;  4A3I C;  4LK0 A;  4YFX A;  5FLM C;  1TWF C;  4YG2 A;  5IP7 C;  4XLN A;  3M4O K;  4OIR A;  5IYC C;  2NVY C;  2PMZ L;  2YU9 C;  2R92 C;  4A3D K; 
#chains in the Genus database with same CATH topology
 3CAG A;  5JVO A;  5C44 C;  2B63 K;  4G7H A;  3LPX A;  4AYB L;  1R9T C;  1WSV A;  4C3I K;  3HOU K;  5IYB C;  2GAH C;  3S15 C;  3A8K A;  2Y3P A;  3TFI A;  4A3I K;  1JOE A;  1TWF K;  1O24 A;  3HXA A;  2WAQ L;  1K83 K;  4BBR C;  3SZZ A;  4AH6 A;  3RZD C;  4M1X A;  1I50 K;  4A3K K;  3GTP C;  3TFH A;  4GTB A;  4KMA A;  5IYD C;  4KAT A;  2JA6 K;  2O5J A;  1O25 A;  5IOQ A;  1EFW A;  4Y52 K;  2YU9 A;  4BBS K;  2R92 A;  1XZQ B;  1WOO A;  1VGX A;  2A69 A;  3ORE A;  1I6H C;  2NVX K;  5C3E C;  2O5I A;  1XXC A;  2NVY K;  3PO2 C;  4BLB A;  2E2J C;  3S1M K;  1R9T A;  3S16 C;  4AYB D;  4A3E C;  3S1N K;  3BP8 C;  4A93 K;  1J6X A;  5CJ9 A;  4BY7 C;  1DCH A;  5JVG S;  1TWH K;  3AH5 A;  4G7O A;  2KQ1 A;  3VA7 A;  2EBB A;  2B63 C;  3CQZ K;  4C3H K;  2WAQ D;  3N0C A;  3GTG K;  4X6A C;  3GTP A;  3HOZ K;  2ZJQ S;  2JA7 K;  1BJT A;  4WJ4 A;  3I4M C;  4QIW L;  1Y1V C;  1X31 C;  5EGE A;  3ERE D;  2KXY A;  1WSR A;  1TWG K;  4KMH A;  3H0G K;  4A3F K;  2XCO A;  1TWA K;  1IS1 A;  2JA5 K;  3TFJ A;  2CFA B;  3FOF A;  4P9S A;  3LAP A;  2JA6 C;  4WFN S;  5FJ8 K;  3FKI C;  1FEU A;  3ADA C;  5M3F K;  4BXX C;  3AD9 C;  3HOY K;  2Y0S L;  3GDZ A;  2JH3 A;  4LK0 A;  4YG2 A;  2V6U A;  3V4G A;  2B63 A;  4OIR A;  2NVY C;  3AD7 C;  3L4J A;  4KAS A;  3S1Q C;  3GEI A;  2R7Z K;  4GT9 A;  3S1M C;  1XZP A;  3GSI A;  4A93 C;  2NVQ K;  4OIQ A;  2VUM C;  2L5N A;  1TWH C;  1IW7 A;  1Y1V A;  4GTE A;  3AD8 C;  4QIW D;  1I6V A;  1WQG A;  3GTO C;  1K83 A;  1I3Q K;  5FLM K;  4YFN A;  1BGW A;  1JVI A;  2GSN A;  4KMU A;  4LOW A;  4A3C C;  1UV7 A;  3HOZ C;  3SZY A;  5IOS A;  1SFO C;  4O2D A;  2CW0 A;  1GE9 A;  5CHP A;  3HOX K;  4A3J C;  2JA6 A;  3FKI A;  3K7A K;  3HOW C;  2KWA A;  2A68 A;  1PJ5 A;  3S14 C;  1J98 A;  5DM6 S;  2R93 C;  2JA8 K;  3N0B A;  4LQY A;  4Q4Z A;  4QJV A;  3IPJ A;  1TWA C;  2Y0S D;  1YNN A;  4WCE S;  2P8T A;  3GTK K;  2NVY A;  4XSX A;  4PAA A;  4A3M K;  4OIP A;  4LLG A;  4JK1 A;  3S2H C;  4A3B K;  4KAR A;  3BP3 A;  4KM9 A;  3AQP A;  3H3V L;  3S1R C;  5C4X K;  4GFQ A;  2VUM A;  3M3Y K;  1TWH A;  1O28 A;  3BUE A;  1J6V A;  4C3J K;  2ZUF A;  4IOC S;  3QX3 A;  1VH2 A;  3HKZ L;  2P5M A;  3GTQ C;  1B4B A;  1WCM K;  4BKW A;  3TTG A;  3GTO A;  1RU0 A;  4OIN A;  1B4A A;  2PHC B;  1SFO A;  3PO3 K;  2NVQ C;  1O27 A;  2ZUE A;  5IP9 C;  1ZXO A;  3GTJ K;  3N3Y A;  4YFK A;  1Y1W C;  2ZFZ A;  1ZYR A;  1TWC K;  4C2M K;  3S2D K;  2E2I C;  2PA8 L;  2E2H K;  2R93 A;  5C4J C;  1WOR A;  4GZY A;  5IOT A;  4G7Z A;  1TWA A;  3GEE A;  5TMC A;  3S0X A;  1BS2 A;  3DLL S;  1EI6 A;  3GTM K;  1ZQ1 C;  3M4O C;  3L4K A;  2A6H A;  5HL8 A;  2W7V A;  4A3L K;  1SMY A;  4LJZ A;  1HQM A;  2RH6 A;  4P5A A;  4KMD A;  4A3G K;  3H3V D;  1ZBS A;  4GTC A;  5HL7 S;  5M5X K;  2NVT K;  4MEX A;  3GTQ A;  1DD5 A;  4C3I C;  1F7V A;  3HOU C;  3HKZ D;  2GAG C;  2V6S A;  4A3I C;  4YFX A;  1TWF C;  1VRQ C;  4A3D K;  1EH1 A;  1O29 A;  1Y1W A;  4C3J C;  3FOE A;  1K83 C;  1O2B A;  2WB1 L;  3G4C A;  2FQT A;  2V6T A;  1J6W A;  1I50 C;  4A3K C;  2E2I A;  2PA8 D;  1XZQ A;  3GTL K;  3S17 K;  3PO3 C;  5EGH A;  3I4N K;  4Y52 C;  4BBS C;  5IYC K;  1IE0 A;  1O2A A;  5L46 A;  3FHZ A;  2YU9 K;  2R92 K;  2NVX C;  4KDD A;  5C44 K;  1F9N A;  1HI9 A;  1V5V A;  3GEH A;  1BDF A;  4LK1 A;  3S1N C;  1R9T K;  1C0A A;  1ISE A;  5IYB K;  3PIP S;  3S15 K;  4WFA S;  1TWF A;  2GSU A;  4OIO A;  1KQ4 A;  1INN A;  1IQ0 A;  1USO A;  3CQZ C;  4C3H C;  3T01 A;  3GTG C;  1I50 A;  2WB1 D;  3RZD K;  4XLP A;  1PJ7 A;  3GTP K;  2JA7 C;  4PAB A;  1WOS A;  4KAW X;  3RZO K;  2PPB A;  2CFA A;  1ZVU A;  1VJE A;  1TWG C;  4A3F C;  3H0G C;  2XCR B;  5M3M K;  2NVX A;  1I6H K;  3AQO A;  2JA5 C;  2ZJP S;  4FM9 A;  4MQ9 A;  3CF5 S;  3GTL C;  4BY1 K;  3PO2 K;  3T02 A;  1USM A;  1IBA A;  3I4N C;  2L3U A;  1XPP A;  3S16 K;  4A3E K;  3HOY C;  4BY7 K;  2KPU A;  2A6E A;  1EK8 A;  1YNJ A;  4GTL A;  3EQL A;  3CQZ A;  4WF9 S;  5D4D A;  3LYW A;  3GTG A;  2R7Z C;  4G0V A;  4X6A K;  2JA7 A;  5M5Y K;  4KN4 A;  4DDQ A;  4Q5S A;  4GTD A;  1F7U A;  5TMF A;  3I4M K;  1Y1V K;  5HQH A;  4Y7N K;  4XSZ A;  5DM7 S;  4MEY A;  1I3Q C;  1VLO A;  1TWG A;  5FLM C;  4P5B A;  3H0G A;  4XCH A;  4XLN A;  1O2F B;  2PMZ L;  4G0U A;  2JA5 A;  2XCQ A;  3HOX C;  3GTL A;  5M5W K;  3K7A C;  3RZO C;  3FKI K;  3OEP A;  3PIO S;  3OPF A;  2JA8 C;  4FZB A;  4BXX K;  1PJ6 A;  4WFB S;  4KN7 A;  3GTK C;  4BY1 C;  2RGR A;  4A3M C;  1L0W A;  4A3B C;  2GSO A;  4KC6 A;  3S1Q K;  2R7Z A;  3HOV K;  1G51 A;  4LR2 A;  1DCP A;  1XXB A;  5C4X C;  5E68 A;  3M3Y C;  2VUM K;  1WQF A;  3JST A;  1WCM C;  1I3Q A;  1XZP B;  3GTO K;  5JFE A;  4A3C K;  4IO9 S;  1SFO K;  2PMZ D;  4ILD A;  3GTJ C;  1JQW A;  5IP7 K;  4A3J K;  3HOW K;  3T00 A;  4NOI A;  2FQO A;  4Y7N C;  1TWC C;  4C2M C;  3S2D C;  3S14 K;  1IL2 A;  2E2H C;  4KB4 A;  4KB2 A;  2R93 K;  3A8J A;  4ZH4 A;  3DXJ A;  3NUH A;  3MML B;  4U67 S;  3A8I A;  4J3N A;  3GTK A;  3LAJ A;  2BE5 A;  3GTM C;  4BLA A;  4A3L C;  3S2H K;  4QJV B;  1WOP A;  1XXA A;  1WQH A;  3S1R K;  4A3G C;  4G0W A;  1WIH A;  2NVT C;  1O26 A;  3GIR A;  4BBR K;  1AB4 A;  4C45 A;  5IOR A;  1WCM A;  1YCL A;  3GTQ K;  3G4A A;  4GTF A;  4IOA S;  3Q3Q A;  3HOV C;  5JVH S;  5IYD K;  4A3D C;  5IP9 K;  3GTJ A;  2D6F C;  1Y1W K;  4KM8 A;  1TWC A;  2E2H A;  1F93 A;  5TJ3 A;  3WOD A;  2E2I K;  5C3E K;  5C4J K;  4RMF A;  2ZJR S;  1EQR A;  4WIL A;  3S17 C;  4GTA A;  3GTM A;  2E2J K;  1YX2 A;  5IP7 C;  3M4O K;  5IYC C;  2YU9 C;  2R92 C;  1DCO A;  4WJ3 M; 
#chains in the Genus database with same CATH homology
 3S1Q C;  4C3J C;  1K83 C;  3HOX C;  2WB1 L;  3S1M C;  2R7Z K;  5M5W K;  3K7A C;  1I50 C;  5C44 C;  4A3K C;  3RZO C;  4A93 C;  4G7H A;  3FKI K;  2B63 K;  2NVQ K;  4OIQ A;  2VUM C;  1TWH C;  1IW7 A;  2PA8 D;  4AYB L;  2JA8 C;  3GTL K;  4QIW D;  4BXX K;  1R9T C;  3S17 K;  4C3I K;  3PO3 C;  1I6V A;  3HOU K;  5IYB C;  3GTO C;  3S15 C;  3I4N K;  1I3Q K;  4A3I K;  5FLM K;  4KN7 A;  4YFN A;  1TWF K;  3GTK C;  4KMU A;  4BY1 C;  4Y52 C;  4BBS C;  4A3C C;  5IYC K;  3HOZ C;  2YU9 K;  4A3M C;  2R92 K;  1SFO C;  2WAQ L;  2CW0 A;  4A3B C;  2NVX C;  3S1Q K;  3HOV K;  1K83 K;  3HOX K;  4A3J C;  4BBR C;  3RZD C;  3HOW C;  3K7A K;  5C4X C;  1I50 K;  5C44 K;  4A3K K;  2A68 A;  3GTP C;  3M3Y C;  1BDF A;  3S14 C;  2VUM K;  4LK1 A;  2R93 C;  2JA8 K;  5IYD C;  4Q4Z A;  3S1N C;  1R9T K;  4QJV A;  2JA6 K;  1WCM C;  1TWA C;  2Y0S D;  1YNN A;  2O5J A;  5IYB K;  3GTO K;  3S15 K;  4OIO A;  3GTK K;  4A3C K;  4Y52 K;  4XSX A;  4BBS K;  3CQZ C;  2A69 A;  4OIP A;  4LLG A;  4C3H C;  4JK1 A;  2PMZ D;  3S2H C;  1I6H C;  4A3M K;  1SFO K;  5C3E C;  2NVX K;  3GTJ C;  4A3B K;  2O5I A;  3GTG C;  5IP7 K;  4A3J K;  3H3V L;  2WB1 D;  3RZD K;  3HOW K;  4NOI A;  4XLP A;  3S1R C;  4Y7N C;  2NVY K;  3PO2 C;  5C4X K;  1TWC C;  4C2M C;  2JA7 C;  3S2D C;  3GTP K;  3M3Y K;  3S14 K;  2E2H C;  4C3J K;  2E2J C;  3S1M K;  2R93 K;  4ZH4 A;  3S16 C;  3DXJ A;  4AYB D;  4A3E C;  3RZO K;  2PPB A;  3HKZ L;  3S1N K;  4A93 K;  3GTQ C;  1WCM K;  4BY7 C;  1TWH K;  4OIN A;  2BE5 A;  3GTM C;  4G7O A;  1TWG C;  4A3F C;  3H0G C;  5M3M K;  3PO3 K;  2B63 C;  2NVQ C;  4A3L C;  3CQZ K;  5IP9 C;  4C3H K;  3S2H K;  1I6H K;  4QJV B;  2WAQ D;  2JA5 C;  3GTJ K;  4YFK A;  1Y1W C;  3GTG K;  4MQ9 A;  3GTL C;  4X6A C;  4BY1 K;  3S1R K;  3HOZ K;  4A3G C;  3PO2 K;  1ZYR A;  1TWC K;  4C2M K;  2JA7 K;  3S2D K;  2E2I C;  2PA8 L;  2E2H K;  3I4M C;  5C4J C;  2NVT C;  3I4N C;  4GZY A;  1XPP A;  4QIW L;  4BBR K;  3S16 K;  1Y1V C;  4G7Z A;  3HOY C;  4A3E K;  3GTQ K;  4BY7 K;  2A6E A;  5TMC A;  3HOV C;  3GTM K;  1YNJ A;  5IYD K;  1TWG K;  3M4O C;  3EQL A;  3H0G K;  4A3F K;  2A6H A;  5D4D A;  4A3L K;  1TWA K;  1SMY A;  4LJZ A;  4A3D C;  5IP9 K;  2JA5 K;  1HQM A;  2R7Z C;  1Y1W K;  4X6A K;  2JA6 C;  4KN4 A;  3H3V D;  3FKI C;  5M5Y K;  4Q5S A;  5FJ8 K;  4A3G K;  2E2I K;  3WOD A;  5TMF A;  5C3E K;  5M5X K;  5C4J K;  2NVT K;  4MEX A;  5M3F K;  3I4M K;  1Y1V K;  4BXX C;  3HOY K;  4Y7N K;  3S17 C;  2Y0S L;  4XSZ A;  4C3I C;  3HOU C;  3HKZ D;  4MEY A;  1I3Q C;  2E2J K;  4A3I C;  4LK0 A;  4YFX A;  5FLM C;  1TWF C;  4YG2 A;  5IP7 C;  4XLN A;  3M4O K;  4OIR A;  5IYC C;  2NVY C;  2PMZ L;  2YU9 C;  2R92 C;  4A3D K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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