3GTKC

Backtracked rna polymerase ii complex with 18mer rna
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 53
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtkC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtkC01
2PPBA 4BXXC 5D4DA 4XSXA 1I50K 5M5XK 4Q5SA 4A3FK 2E2IC 3HOUC 4BY1K 4LK0A 3GTGK 3S15K 5M5WK 3M4OC 3HOYK 3GTQC 1TWCK 4LK1A 4QJVA 1I6HK 2JA5K 4C2MC 4A3FC 4OIPA 3K7AK 4BY1C 2E2IK 3H0GK 4OIQA 5C3EC 2JA6K 3GTLK 3GTOK 4Y52C 3RZDC 2R93C 5C4JK 3EQLA 2A68A 3S1NK 2YU9C 1HQMA 4KN7A 1ZYRA 3GTGC 1R9TC 3HKZD 3PO2K 3M4OK 4AYBL 4A93K 4YFNA 3S1NC 4A3BK 3HOVC 2R92C 2NVYC 1IW7A 3RZOC 4MEYA 5M3FK 4YG2A 3S2HC 1WCMC 2R7ZK 4A3CK 2B63C 3HOVK 2NVTK 3HOXC 2VUMK 1YNNA 3PO3C 3S14K 3GTQK 5C44C 3H3VL 4BBSC 2NVXC 3GTJK 3S16K 2NVTC 3S14C 4Q4ZA 4KN4A 3WODA 1Y1WK 1I3QC 2O5IA 4X6AK 5IYDK 3GTPC 3S2HK 4C3JK 3GTMC 4A3GK 4A3JK 2JA5C 4A3MK 1Y1WC 5TMCA 4X6AC 1XPPA 3K7AC 4A3IC 4A3EC 3GTKC 3HOWC 1TWGK 2O5JA 4Y7NC 5FLMC 2JA7K 5C44K 4A3LK 5TMFA 5IP9C 3PO2C 1TWFC 2PMZL 4A3IK 3HOWK 3HOUK 4BY7K 4Y7NK 2R93K 5IYCK 2JA7C 3GTKK 3DXJA 5IYBC 3CQZC 4JK1A 4MEXA 3S2DC 5IP7K 3S1QC 4BBRK 5IYCC 2CW0A 3H0GC 4QIWD 4BY7C 1TWAK 3CQZK 5C3EK 3S15C 4QIWL 4A3BC 2JA8K 3I4NC 5M5YK 1BDFA 2NVQC 3HOYC 3S16C 1TWHK 4XSZA 3H3VD 2PA8D 4QJVB 5M3MK 1YNJA 4AYBD 2YU9K 1K83C 3HKZL 3S1MK 4C3IC 2A6EA 4NOIA 2WAQD 4C3HC 2VUMC 4BXXK 4C3JC 3HOZK 3GTLC 3S1QK 2A69A 2WB1D 4YFXA 4LLGA 2R92K 3RZOK 4C3HK 3FKIK 3GTJC 2E2JK 1TWCC 1I6HC 1I6VA 4GZYA 1TWFK 4C2MK 2E2HK 1R9TK 3GTMK 4KMUA 1TWHC 3I4MC 3HOXK 2Y0SD 1SFOK 3S1RC 2WAQL 4A3JC 1SFOC 3S17K 4A3DK 3RZDK 4Y52K 2BE5A 5C4JC 1TWAC 4A3KC 4XLNA 3HOZC 3S17C 4A3DC 1I3QK 2WB1L 4MQ9A 2E2HC 1K83K 2Y0SL 5FJ8K 1TWGC 4G7ZA 4OIOA 4A3EK 2NVXK 4A3LC 5FLMK 2NVQK 5C4XC 2R7ZC 3M3YK 1WCMK 2B63K 5IYDC 4A3CC 4YFKA 4A3KK 3GTPK 5IP7C 3S2DK 5IYBK 5C4XK 3M3YC 4XLPA 3S1MC 4C3IK 1Y1VK 4BBSK 3I4MK 3S1RK 4LJZA 2PA8L 3I4NK 2JA8C 2A6HA 4OIRA 1Y1VC 5IP9K 1SMYA 2PMZD 4OINA 4A93C 4ZH4A 4G7OA 3FKIC 2E2JC 3PO3K 4G7HA 1I50C 4A3MC 2JA6C 4A3GC 4BBRC 2NVYK 3GTOC
chains in the Genus database with same CATH superfamily
4BXXC 5M5XK 4A3FK 4BY1K 3GTGK 4IOAS 5M5WK 4LK1A 3K7AK 4P5BA 5DM7S 2JA6K 4KAWX 3EQLA 1EFWA 3S1NK 3GTGC 2ZFZA 3FKIA 2L5NA 4YFNA 5IOTA 1EQRA 4G0UA 4YG2A 4LR2A 1EK8A 3HOVK 2VUMK 1YNNA 3A8IA 3S14C 1F93A 1YX2A 3WODA 1I3QC 3GTPC 4C3JK 3FOEA 2Y3PA 2JA5C 2GSOA 2XCOA 3HOWC 5TMFA 1G51A 4BY7K 2JA7C 4JK1A 2GSUA 4KM9A 2R7ZA 4BBRK 2CW0A 1TWAK 5C3EK 3HOYC 2VUMA 4XSZA 3AQPA 4AYBD 1ZVUA 4NOIA 4G0WA 3OPFA 3VA7A 3A8KA 2A69A 4C3HK 1RU0A 1VLOA 1VJEA 3I4MC 4A3DK 4Y52K 2BE5A 4GTEA 4A3KC 1XZPA 4XLNA 2V6UA 2WB1L 5EGEA 1ZBSA 2KPUA 1K83K 5IORA 1JVIA 3PIOS 4WFNS 1AB4A 1WCMK 2B63K 4KARA 4A3CC 4A3KK 2JA7A 3IPJA 3GTPK 3M3YC 4XLPA 1Y1VK 5JVGS 1BS2A 4OIRA 1SMYA 3FKIC 3L4KA 3GTOC 5D4DA 4KMHA 1I50K 2YU9A 5HQHA 3HOUC 4LK0A 3HOYK 1TWCK 3CAGA 4C2MC 3OREA 4ILDA 2E2IK 4OIQA 4KDDA 2B63A 3GTOK 3RZDC 1PJ5A 1WOSA 2A68A 4KN7A 1WQFA 1WSVA 2R93A 4KASA 3S1NC 1XZQB 2NVYC 4GTCA 3S2HC 1WCMC 4KB4A 3QX3A 4A3CK 2CFAB 2NVTK 3PO3C 3AD8C 2W7VA 4GT9A 3GTQA 1XXCA 4KN4A 4X6AK 2O5IA 2E2IA 3S2HK 3SZZA 4A3JK 1Y1WC 5TMCA 3GTOA 1XPPA 1R9TA 2E2HA 2O5JA 5FLMC 3G4AA 3HOWK 1IS1A 2R93K 1TWAA 3GTKK 3CQZC 3OEPA 1HI9A 1BJTA 2ZJRS 3N0BA 3LAJA 1WQHA 3DLLS 1YCLA 3S15C 2JA8K 4A3BC 3I4NC 4IO9S 3S16C 1TWHK 4WF9S 1K83C 2A6EA 1O28A 4YFXA 1XZQA 3GTJC 1I6HC 5JFEA 1J6VA 4GTAA 3TFHA 2E2HK 1R9TK 4KMUA 1TWHC 2Y0SD 1F7VA 1IL2A 1WSRA 1TWFA 4C45A 1SFOC 2NVYA 5C4JC 5CHPA 3GTKA 2GAGC 4A3DC 1I3QK 3GTMA 2KQ1A 3GEIA 1O25A 1VGXA 4MQ9A 2P8TA 2E2HC 2PHCB 3FOFA 1Y1WA 4G7ZA 1ZQ1C 1DCPA 5FLMK 5C4XC 1XXBA 4GTDA 3L4JA 2R7ZC 1JQWA 1PJ7A 1O24A 3S1MC 2JH3A 4C3IK 4P5AA 4LJZA 2PA8L 3I4NK 1Y1VC 4OINA 2PMZD 2XCRB 4PABA 2E2JC 1INNA 4G7HA 1I50A 1GE9A 4A3MC 1B4BA 4A3GC 2NVYK 1EH1A 3M4OC 1DD5A 2JA5K 4A3FC 4BLBA 2V6TA 4BY1C 3H0GK 2ZUFA 1KQ4A 3V4GA 2GSNA 4Y52C 4RMFA 1O2BA 2YU9C 1ZYRA 4A93K 1R9TC 3M4OK 4AYBL 1ZXOA 3HXAA 3HOVC 2R92C 3RZOC 1IW7A 4WFAS 4MEYA 3Q3QA 1XXAA 2KWAA 2P5MA 2B63C 2ZJQS 3HOXC 4BLAA 3S14K 1O2AA 3GTQK 4PAAA 1TWCA 2NVXC 4LQYA 3S16K 5IOSA 3G4CA 5IOQA 3GEHA 3GDZA 1ISEA 1F9NA 3AD9C 5IYDK 3GTJA 1IE0A 2FQTA 4A3GK 1O27A 1USOA 5HL7S 3K7AC 4A3IC 4A3EC 1TWGK 5EGHA 4FM9A 4GTFA 4Y7NC 2JA7K 4A3LK 3PO2C 1SFOA 2PMZL 1Y1VA 3HOUK 1WIHA 5IYCK 5IYBC 3DXJA 4MEXA 4WCES 1WOOA 3NUHA 1J6XA 1PJ6A 1IBAA 4BY7C 1TWHA 3CQZK 5E68A 1O26A 3BP3A 4WJ4A 4WFBS 5M5YK 2RGRA 4IOCS 2NVQC 3H3VD 2PA8D 5M3MK 1YNJA 2YU9K 3N3YA 2GAHC 3N0CA 4GTLA 3T00A 2WAQD 2VUMC 3ERED 3HOZK 4KM8A 3GTLC 4XCHA 2D6FC 5CJ9A 2WB1D 2ZJPS 4U67S 3FKIK 4P9SA 3CF5S 3LPXA 1I6VA 4GZYA 1TWFK 4WILA 1O2FB 3ADAC 3T01A 3S17K 3BUEA 3HOZC 4FZBA 1J98A 2Y0SL 5FJ8K 1TWGC 4A3EK 4OIOA 2NVXK 4A3LC 4O2DA 3GEEA 1FEUA 5IYDC 1V5VA 1WQGA 3JSTA 4BBSK 2EBBA 3S1RK 2JA8C 3PO2K 2NVQK 3S15K 4A93C 4G7OA 4ZH4A 4BKWA 3PO3K 5JVHS 1I3QA 3GTMK 2PPBA 4XSXA 3AQOA 4Q5SA 2E2IC 3AD7C 3GTQC 1I6HK 4QJVA 2V6SA 4KMAA 4OIPA 2NVXA 3PIPS 5C3EC 3GTLK 1B4AA 5JVOA 2R93C 5DM6S 5C4JK 2JA6A 4AH6A 1HQMA 4G0VA 3HKZD 3LYWA 3GIRA 5TJ3A 1O29A 4A3BK 4KB2A 4KATA 5M3FK 2L3UA 4GTBA 2R7ZK 3FHZA 5C44C 3H3VL 5L46A 4BBSC 1USMA 4KMDA 3GTJK 4J3NA 2NVTC 4Q4ZA 1Y1WK 4M1XA 2R92A 4DDQA 1UV7A 2ZUEA 3GTMC 1SFOK 3GTLA 4A3MK 4X6AC 1WORA 3GTKC 5C44K 3TFIA 5IP9C 1TWFC 4A3IK 2KXYA 4Y7NK 1VRQC 3CQZA 3S2DC 5IP7K 3S1QC 4LOWA 3A8JA 1JOEA 5IYCC 1J6WA 3H0GC 4QIWD 4WJ3M 4QIWL 1BDFA 1DCHA 4QJVB 3TFJA 1C0AA 3AH5A 1K83A 3S1MK 3HKZL 4C3IC 4C3HC 1WOPA 4BXXK 4C3JC 3BP8C 3S1QK 2JA5A 4LLGA 2R92K 3H0GA 3RZOK 2E2JK 3GTPA 1TWCC 1BGWA 4C2MK 3GSIA 3HOXK 1DCOA 1EI6A 3S1RC 2WAQL 4A3JC 3RZDK 1TWAC 2RH6A 1IQ0A 3S17C 1VH2A 3GTGA 3S0XA 5HL8A 3T02A 3MMLB 1F7UA 4KC6A 1L0WA 3M3YK 4YFKA 1XZPB 5IP7C 2FQOA 3S2DK 5IYBK 5C4XK 3SZYA 1WCMA 3I4MK 3TTGA 1X31C 2A6HA 2XCQA 5IP9K 2CFAA 1TWGA 4GFQA 3LAPA 1I50C 2JA6C 4BBRC
chains in the Genus database with same CATH topology
2PPBA 4BXXC 5D4DA 4XSXA 1I50K 5M5XK 4Q5SA 4A3FK 2E2IC 3HOUC 4BY1K 4LK0A 3GTGK 3S15K 5M5WK 3M4OC 3HOYK 3GTQC 1TWCK 4LK1A 4QJVA 1I6HK 2JA5K 4C2MC 4A3FC 4OIPA 3K7AK 4BY1C 2E2IK 3H0GK 4OIQA 5C3EC 2JA6K 3GTLK 3GTOK 4Y52C 3RZDC 2R93C 5C4JK 3EQLA 2A68A 3S1NK 2YU9C 1HQMA 4KN7A 1ZYRA 3GTGC 1R9TC 3HKZD 3PO2K 3M4OK 4AYBL 4A93K 4YFNA 3S1NC 4A3BK 3HOVC 2R92C 2NVYC 1IW7A 3RZOC 4MEYA 5M3FK 4YG2A 3S2HC 1WCMC 2R7ZK 4A3CK 2B63C 3HOVK 2NVTK 3HOXC 2VUMK 1YNNA 3PO3C 3S14K 3GTQK 5C44C 3H3VL 4BBSC 2NVXC 3GTJK 3S16K 2NVTC 3S14C 4Q4ZA 4KN4A 3WODA 1Y1WK 1I3QC 2O5IA 4X6AK 5IYDK 3GTPC 3S2HK 4C3JK 3GTMC 4A3GK 4A3JK 2JA5C 4A3MK 1Y1WC 5TMCA 4X6AC 1XPPA 3K7AC 4A3IC 4A3EC 3GTKC 3HOWC 1TWGK 2O5JA 4Y7NC 5FLMC 2JA7K 5C44K 4A3LK 5TMFA 5IP9C 3PO2C 1TWFC 2PMZL 4A3IK 3HOWK 3HOUK 4BY7K 4Y7NK 2R93K 5IYCK 2JA7C 3GTKK 3DXJA 5IYBC 3CQZC 4JK1A 4MEXA 3S2DC 5IP7K 3S1QC 4BBRK 5IYCC 2CW0A 3H0GC 4QIWD 4BY7C 1TWAK 3CQZK 5C3EK 3S15C 4QIWL 4A3BC 2JA8K 3I4NC 5M5YK 1BDFA 2NVQC 3HOYC 3S16C 1TWHK 4XSZA 3H3VD 2PA8D 4QJVB 5M3MK 1YNJA 4AYBD 2YU9K 1K83C 3HKZL 3S1MK 4C3IC 2A6EA 4NOIA 2WAQD 4C3HC 2VUMC 4BXXK 4C3JC 3HOZK 3GTLC 3S1QK 2A69A 2WB1D 4YFXA 4LLGA 2R92K 3RZOK 4C3HK 3FKIK 3GTJC 2E2JK 1TWCC 1I6HC 1I6VA 4GZYA 1TWFK 4C2MK 2E2HK 1R9TK 3GTMK 4KMUA 1TWHC 3I4MC 3HOXK 2Y0SD 1SFOK 3S1RC 2WAQL 4A3JC 1SFOC 3S17K 4A3DK 3RZDK 4Y52K 2BE5A 5C4JC 1TWAC 4A3KC 4XLNA 3HOZC 3S17C 4A3DC 1I3QK 2WB1L 4MQ9A 2E2HC 1K83K 2Y0SL 5FJ8K 1TWGC 4G7ZA 4OIOA 4A3EK 2NVXK 4A3LC 5FLMK 2NVQK 5C4XC 2R7ZC 3M3YK 1WCMK 2B63K 5IYDC 4A3CC 4YFKA 4A3KK 3GTPK 5IP7C 3S2DK 5IYBK 5C4XK 3M3YC 4XLPA 3S1MC 4C3IK 1Y1VK 4BBSK 3I4MK 3S1RK 4LJZA 2PA8L 3I4NK 2JA8C 2A6HA 4OIRA 1Y1VC 5IP9K 1SMYA 2PMZD 4OINA 4A93C 4ZH4A 4G7OA 3FKIC 2E2JC 3PO3K 4G7HA 1I50C 4A3MC 2JA6C 4A3GC 4BBRC 2NVYK 3GTOC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PPB A;  4BXX C;  5D4D A;  4XSX A;  1I50 K;  5M5X K;  4Q5S A;  4A3F K;  2E2I C;  3HOU C;  4BY1 K;  4LK0 A;  3GTG K;  3S15 K;  5M5W K;  3M4O C;  3HOY K;  3GTQ C;  1TWC K;  4LK1 A;  4QJV A;  1I6H K;  2JA5 K;  4C2M C;  4A3F C;  4OIP A;  3K7A K;  4BY1 C;  2E2I K;  3H0G K;  4OIQ A;  5C3E C;  2JA6 K;  3GTL K;  3GTO K;  4Y52 C;  3RZD C;  2R93 C;  5C4J K;  3EQL A;  2A68 A;  3S1N K;  2YU9 C;  1HQM A;  4KN7 A;  1ZYR A;  3GTG C;  1R9T C;  3HKZ D;  3PO2 K;  3M4O K;  4AYB L;  4A93 K;  4YFN A;  3S1N C;  4A3B K;  3HOV C;  2R92 C;  2NVY C;  1IW7 A;  3RZO C;  4MEY A;  5M3F K;  4YG2 A;  3S2H C;  1WCM C;  2R7Z K;  4A3C K;  2B63 C;  3HOV K;  2NVT K;  3HOX C;  2VUM K;  1YNN A;  3PO3 C;  3S14 K;  3GTQ K;  5C44 C;  3H3V L;  4BBS C;  2NVX C;  3GTJ K;  3S16 K;  2NVT C;  3S14 C;  4Q4Z A;  4KN4 A;  3WOD A;  1Y1W K;  1I3Q C;  2O5I A;  4X6A K;  5IYD K;  3GTP C;  3S2H K;  4C3J K;  3GTM C;  4A3G K;  4A3J K;  2JA5 C;  4A3M K;  1Y1W C;  5TMC A;  4X6A C;  1XPP A;  3K7A C;  4A3I C;  4A3E C;  3GTK C;  3HOW C;  1TWG K;  2O5J A;  4Y7N C;  5FLM C;  2JA7 K;  5C44 K;  4A3L K;  5TMF A;  5IP9 C;  3PO2 C;  1TWF C;  2PMZ L;  4A3I K;  3HOW K;  3HOU K;  4BY7 K;  4Y7N K;  2R93 K;  5IYC K;  2JA7 C;  3GTK K;  3DXJ A;  5IYB C;  3CQZ C;  4JK1 A;  4MEX A;  3S2D C;  5IP7 K;  3S1Q C;  4BBR K;  5IYC C;  2CW0 A;  3H0G C;  4QIW D;  4BY7 C;  1TWA K;  3CQZ K;  5C3E K;  3S15 C;  4QIW L;  4A3B C;  2JA8 K;  3I4N C;  5M5Y K;  1BDF A;  2NVQ C;  3HOY C;  3S16 C;  1TWH K;  4XSZ A;  3H3V D;  2PA8 D;  4QJV B;  5M3M K;  1YNJ A;  4AYB D;  2YU9 K;  1K83 C;  3HKZ L;  3S1M K;  4C3I C;  2A6E A;  4NOI A;  2WAQ D;  4C3H C;  2VUM C;  4BXX K;  4C3J C;  3HOZ K;  3GTL C;  3S1Q K;  2A69 A;  2WB1 D;  4YFX A;  4LLG A;  2R92 K;  3RZO K;  4C3H K;  3FKI K;  3GTJ C;  2E2J K;  1TWC C;  1I6H C;  1I6V A;  4GZY A;  1TWF K;  4C2M K;  2E2H K;  1R9T K;  3GTM K;  4KMU A;  1TWH C;  3I4M C;  3HOX K;  2Y0S D;  1SFO K;  3S1R C;  2WAQ L;  4A3J C;  1SFO C;  3S17 K;  4A3D K;  3RZD K;  4Y52 K;  2BE5 A;  5C4J C;  1TWA C;  4A3K C;  4XLN A;  3HOZ C;  3S17 C;  4A3D C;  1I3Q K;  2WB1 L;  4MQ9 A;  2E2H C;  1K83 K;  2Y0S L;  5FJ8 K;  1TWG C;  4G7Z A;  4OIO A;  4A3E K;  2NVX K;  4A3L C;  5FLM K;  2NVQ K;  5C4X C;  2R7Z C;  3M3Y K;  1WCM K;  2B63 K;  5IYD C;  4A3C C;  4YFK A;  4A3K K;  3GTP K;  5IP7 C;  3S2D K;  5IYB K;  5C4X K;  3M3Y C;  4XLP A;  3S1M C;  4C3I K;  1Y1V K;  4BBS K;  3I4M K;  3S1R K;  4LJZ A;  2PA8 L;  3I4N K;  2JA8 C;  2A6H A;  4OIR A;  1Y1V C;  5IP9 K;  1SMY A;  2PMZ D;  4OIN A;  4A93 C;  4ZH4 A;  4G7O A;  3FKI C;  2E2J C;  3PO3 K;  4G7H A;  1I50 C;  4A3M C;  2JA6 C;  4A3G C;  4BBR C;  2NVY K;  3GTO C; 
#chains in the Genus database with same CATH topology
 4BXX C;  5M5X K;  4A3F K;  4BY1 K;  3GTG K;  4IOA S;  5M5W K;  4LK1 A;  3K7A K;  4P5B A;  5DM7 S;  2JA6 K;  4KAW X;  3EQL A;  1EFW A;  3S1N K;  3GTG C;  2ZFZ A;  3FKI A;  2L5N A;  4YFN A;  5IOT A;  1EQR A;  4G0U A;  4YG2 A;  4LR2 A;  1EK8 A;  3HOV K;  2VUM K;  1YNN A;  3A8I A;  3S14 C;  1F93 A;  1YX2 A;  3WOD A;  1I3Q C;  3GTP C;  4C3J K;  3FOE A;  2Y3P A;  2JA5 C;  2GSO A;  2XCO A;  3HOW C;  5TMF A;  1G51 A;  4BY7 K;  2JA7 C;  4JK1 A;  2GSU A;  4KM9 A;  2R7Z A;  4BBR K;  2CW0 A;  1TWA K;  5C3E K;  3HOY C;  2VUM A;  4XSZ A;  3AQP A;  4AYB D;  1ZVU A;  4NOI A;  4G0W A;  3OPF A;  3VA7 A;  3A8K A;  2A69 A;  4C3H K;  1RU0 A;  1VLO A;  1VJE A;  3I4M C;  4A3D K;  4Y52 K;  2BE5 A;  4GTE A;  4A3K C;  1XZP A;  4XLN A;  2V6U A;  2WB1 L;  5EGE A;  1ZBS A;  2KPU A;  1K83 K;  5IOR A;  1JVI A;  3PIO S;  4WFN S;  1AB4 A;  1WCM K;  2B63 K;  4KAR A;  4A3C C;  4A3K K;  2JA7 A;  3IPJ A;  3GTP K;  3M3Y C;  4XLP A;  1Y1V K;  5JVG S;  1BS2 A;  4OIR A;  1SMY A;  3FKI C;  3L4K A;  3GTO C;  5D4D A;  4KMH A;  1I50 K;  2YU9 A;  5HQH A;  3HOU C;  4LK0 A;  3HOY K;  1TWC K;  3CAG A;  4C2M C;  3ORE A;  4ILD A;  2E2I K;  4OIQ A;  4KDD A;  2B63 A;  3GTO K;  3RZD C;  1PJ5 A;  1WOS A;  2A68 A;  4KN7 A;  1WQF A;  1WSV A;  2R93 A;  4KAS A;  3S1N C;  1XZQ B;  2NVY C;  4GTC A;  3S2H C;  1WCM C;  4KB4 A;  3QX3 A;  4A3C K;  2CFA B;  2NVT K;  3PO3 C;  3AD8 C;  2W7V A;  4GT9 A;  3GTQ A;  1XXC A;  4KN4 A;  4X6A K;  2O5I A;  2E2I A;  3S2H K;  3SZZ A;  4A3J K;  1Y1W C;  5TMC A;  3GTO A;  1XPP A;  1R9T A;  2E2H A;  2O5J A;  5FLM C;  3G4A A;  3HOW K;  1IS1 A;  2R93 K;  1TWA A;  3GTK K;  3CQZ C;  3OEP A;  1HI9 A;  1BJT A;  2ZJR S;  3N0B A;  3LAJ A;  1WQH A;  3DLL S;  1YCL A;  3S15 C;  2JA8 K;  4A3B C;  3I4N C;  4IO9 S;  3S16 C;  1TWH K;  4WF9 S;  1K83 C;  2A6E A;  1O28 A;  4YFX A;  1XZQ A;  3GTJ C;  1I6H C;  5JFE A;  1J6V A;  4GTA A;  3TFH A;  2E2H K;  1R9T K;  4KMU A;  1TWH C;  2Y0S D;  1F7V A;  1IL2 A;  1WSR A;  1TWF A;  4C45 A;  1SFO C;  2NVY A;  5C4J C;  5CHP A;  3GTK A;  2GAG C;  4A3D C;  1I3Q K;  3GTM A;  2KQ1 A;  3GEI A;  1O25 A;  1VGX A;  4MQ9 A;  2P8T A;  2E2H C;  2PHC B;  3FOF A;  1Y1W A;  4G7Z A;  1ZQ1 C;  1DCP A;  5FLM K;  5C4X C;  1XXB A;  4GTD A;  3L4J A;  2R7Z C;  1JQW A;  1PJ7 A;  1O24 A;  3S1M C;  2JH3 A;  4C3I K;  4P5A A;  4LJZ A;  2PA8 L;  3I4N K;  1Y1V C;  4OIN A;  2PMZ D;  2XCR B;  4PAB A;  2E2J C;  1INN A;  4G7H A;  1I50 A;  1GE9 A;  4A3M C;  1B4B A;  4A3G C;  2NVY K;  1EH1 A;  3M4O C;  1DD5 A;  2JA5 K;  4A3F C;  4BLB A;  2V6T A;  4BY1 C;  3H0G K;  2ZUF A;  1KQ4 A;  3V4G A;  2GSN A;  4Y52 C;  4RMF A;  1O2B A;  2YU9 C;  1ZYR A;  4A93 K;  1R9T C;  3M4O K;  4AYB L;  1ZXO A;  3HXA A;  3HOV C;  2R92 C;  3RZO C;  1IW7 A;  4WFA S;  4MEY A;  3Q3Q A;  1XXA A;  2KWA A;  2P5M A;  2B63 C;  2ZJQ S;  3HOX C;  4BLA A;  3S14 K;  1O2A A;  3GTQ K;  4PAA A;  1TWC A;  2NVX C;  4LQY A;  3S16 K;  5IOS A;  3G4C A;  5IOQ A;  3GEH A;  3GDZ A;  1ISE A;  1F9N A;  3AD9 C;  5IYD K;  3GTJ A;  1IE0 A;  2FQT A;  4A3G K;  1O27 A;  1USO A;  5HL7 S;  3K7A C;  4A3I C;  4A3E C;  1TWG K;  5EGH A;  4FM9 A;  4GTF A;  4Y7N C;  2JA7 K;  4A3L K;  3PO2 C;  1SFO A;  2PMZ L;  1Y1V A;  3HOU K;  1WIH A;  5IYC K;  5IYB C;  3DXJ A;  4MEX A;  4WCE S;  1WOO A;  3NUH A;  1J6X A;  1PJ6 A;  1IBA A;  4BY7 C;  1TWH A;  3CQZ K;  5E68 A;  1O26 A;  3BP3 A;  4WJ4 A;  4WFB S;  5M5Y K;  2RGR A;  4IOC S;  2NVQ C;  3H3V D;  2PA8 D;  5M3M K;  1YNJ A;  2YU9 K;  3N3Y A;  2GAH C;  3N0C A;  4GTL A;  3T00 A;  2WAQ D;  2VUM C;  3ERE D;  3HOZ K;  4KM8 A;  3GTL C;  4XCH A;  2D6F C;  5CJ9 A;  2WB1 D;  2ZJP S;  4U67 S;  3FKI K;  4P9S A;  3CF5 S;  3LPX A;  1I6V A;  4GZY A;  1TWF K;  4WIL A;  1O2F B;  3ADA C;  3T01 A;  3S17 K;  3BUE A;  3HOZ C;  4FZB A;  1J98 A;  2Y0S L;  5FJ8 K;  1TWG C;  4A3E K;  4OIO A;  2NVX K;  4A3L C;  4O2D A;  3GEE A;  1FEU A;  5IYD C;  1V5V A;  1WQG A;  3JST A;  4BBS K;  2EBB A;  3S1R K;  2JA8 C;  3PO2 K;  2NVQ K;  3S15 K;  4A93 C;  4G7O A;  4ZH4 A;  4BKW A;  3PO3 K;  5JVH S;  1I3Q A;  3GTM K;  2PPB A;  4XSX A;  3AQO A;  4Q5S A;  2E2I C;  3AD7 C;  3GTQ C;  1I6H K;  4QJV A;  2V6S A;  4KMA A;  4OIP A;  2NVX A;  3PIP S;  5C3E C;  3GTL K;  1B4A A;  5JVO A;  2R93 C;  5DM6 S;  5C4J K;  2JA6 A;  4AH6 A;  1HQM A;  4G0V A;  3HKZ D;  3LYW A;  3GIR A;  5TJ3 A;  1O29 A;  4A3B K;  4KB2 A;  4KAT A;  5M3F K;  2L3U A;  4GTB A;  2R7Z K;  3FHZ A;  5C44 C;  3H3V L;  5L46 A;  4BBS C;  1USM A;  4KMD A;  3GTJ K;  4J3N A;  2NVT C;  4Q4Z A;  1Y1W K;  4M1X A;  2R92 A;  4DDQ A;  1UV7 A;  2ZUE A;  3GTM C;  1SFO K;  3GTL A;  4A3M K;  4X6A C;  1WOR A;  3GTK C;  5C44 K;  3TFI A;  5IP9 C;  1TWF C;  4A3I K;  2KXY A;  4Y7N K;  1VRQ C;  3CQZ A;  3S2D C;  5IP7 K;  3S1Q C;  4LOW A;  3A8J A;  1JOE A;  5IYC C;  1J6W A;  3H0G C;  4QIW D;  4WJ3 M;  4QIW L;  1BDF A;  1DCH A;  4QJV B;  3TFJ A;  1C0A A;  3AH5 A;  1K83 A;  3S1M K;  3HKZ L;  4C3I C;  4C3H C;  1WOP A;  4BXX K;  4C3J C;  3BP8 C;  3S1Q K;  2JA5 A;  4LLG A;  2R92 K;  3H0G A;  3RZO K;  2E2J K;  3GTP A;  1TWC C;  1BGW A;  4C2M K;  3GSI A;  3HOX K;  1DCO A;  1EI6 A;  3S1R C;  2WAQ L;  4A3J C;  3RZD K;  1TWA C;  2RH6 A;  1IQ0 A;  3S17 C;  1VH2 A;  3GTG A;  3S0X A;  5HL8 A;  3T02 A;  3MML B;  1F7U A;  4KC6 A;  1L0W A;  3M3Y K;  4YFK A;  1XZP B;  5IP7 C;  2FQO A;  3S2D K;  5IYB K;  5C4X K;  3SZY A;  1WCM A;  3I4M K;  3TTG A;  1X31 C;  2A6H A;  2XCQ A;  5IP9 K;  2CFA A;  1TWG A;  4GFQ A;  3LAP A;  1I50 C;  2JA6 C;  4BBR C; 
#chains in the Genus database with same CATH homology
 2PPB A;  4BXX C;  5D4D A;  4XSX A;  1I50 K;  5M5X K;  4Q5S A;  4A3F K;  2E2I C;  3HOU C;  4BY1 K;  4LK0 A;  3GTG K;  3S15 K;  5M5W K;  3M4O C;  3HOY K;  3GTQ C;  1TWC K;  4LK1 A;  4QJV A;  1I6H K;  2JA5 K;  4C2M C;  4A3F C;  4OIP A;  3K7A K;  4BY1 C;  2E2I K;  3H0G K;  4OIQ A;  5C3E C;  2JA6 K;  3GTL K;  3GTO K;  4Y52 C;  3RZD C;  2R93 C;  5C4J K;  3EQL A;  2A68 A;  3S1N K;  2YU9 C;  1HQM A;  4KN7 A;  1ZYR A;  3GTG C;  1R9T C;  3HKZ D;  3PO2 K;  3M4O K;  4AYB L;  4A93 K;  4YFN A;  3S1N C;  4A3B K;  3HOV C;  2R92 C;  2NVY C;  1IW7 A;  3RZO C;  4MEY A;  5M3F K;  4YG2 A;  3S2H C;  1WCM C;  2R7Z K;  4A3C K;  2B63 C;  3HOV K;  2NVT K;  3HOX C;  2VUM K;  1YNN A;  3PO3 C;  3S14 K;  3GTQ K;  5C44 C;  3H3V L;  4BBS C;  2NVX C;  3GTJ K;  3S16 K;  2NVT C;  3S14 C;  4Q4Z A;  4KN4 A;  3WOD A;  1Y1W K;  1I3Q C;  2O5I A;  4X6A K;  5IYD K;  3GTP C;  3S2H K;  4C3J K;  3GTM C;  4A3G K;  4A3J K;  2JA5 C;  4A3M K;  1Y1W C;  5TMC A;  4X6A C;  1XPP A;  3K7A C;  4A3I C;  4A3E C;  3GTK C;  3HOW C;  1TWG K;  2O5J A;  4Y7N C;  5FLM C;  2JA7 K;  5C44 K;  4A3L K;  5TMF A;  5IP9 C;  3PO2 C;  1TWF C;  2PMZ L;  4A3I K;  3HOW K;  3HOU K;  4BY7 K;  4Y7N K;  2R93 K;  5IYC K;  2JA7 C;  3GTK K;  3DXJ A;  5IYB C;  3CQZ C;  4JK1 A;  4MEX A;  3S2D C;  5IP7 K;  3S1Q C;  4BBR K;  5IYC C;  2CW0 A;  3H0G C;  4QIW D;  4BY7 C;  1TWA K;  3CQZ K;  5C3E K;  3S15 C;  4QIW L;  4A3B C;  2JA8 K;  3I4N C;  5M5Y K;  1BDF A;  2NVQ C;  3HOY C;  3S16 C;  1TWH K;  4XSZ A;  3H3V D;  2PA8 D;  4QJV B;  5M3M K;  1YNJ A;  4AYB D;  2YU9 K;  1K83 C;  3HKZ L;  3S1M K;  4C3I C;  2A6E A;  4NOI A;  2WAQ D;  4C3H C;  2VUM C;  4BXX K;  4C3J C;  3HOZ K;  3GTL C;  3S1Q K;  2A69 A;  2WB1 D;  4YFX A;  4LLG A;  2R92 K;  3RZO K;  4C3H K;  3FKI K;  3GTJ C;  2E2J K;  1TWC C;  1I6H C;  1I6V A;  4GZY A;  1TWF K;  4C2M K;  2E2H K;  1R9T K;  3GTM K;  4KMU A;  1TWH C;  3I4M C;  3HOX K;  2Y0S D;  1SFO K;  3S1R C;  2WAQ L;  4A3J C;  1SFO C;  3S17 K;  4A3D K;  3RZD K;  4Y52 K;  2BE5 A;  5C4J C;  1TWA C;  4A3K C;  4XLN A;  3HOZ C;  3S17 C;  4A3D C;  1I3Q K;  2WB1 L;  4MQ9 A;  2E2H C;  1K83 K;  2Y0S L;  5FJ8 K;  1TWG C;  4G7Z A;  4OIO A;  4A3E K;  2NVX K;  4A3L C;  5FLM K;  2NVQ K;  5C4X C;  2R7Z C;  3M3Y K;  1WCM K;  2B63 K;  5IYD C;  4A3C C;  4YFK A;  4A3K K;  3GTP K;  5IP7 C;  3S2D K;  5IYB K;  5C4X K;  3M3Y C;  4XLP A;  3S1M C;  4C3I K;  1Y1V K;  4BBS K;  3I4M K;  3S1R K;  4LJZ A;  2PA8 L;  3I4N K;  2JA8 C;  2A6H A;  4OIR A;  1Y1V C;  5IP9 K;  1SMY A;  2PMZ D;  4OIN A;  4A93 C;  4ZH4 A;  4G7O A;  3FKI C;  2E2J C;  3PO3 K;  4G7H A;  1I50 C;  4A3M C;  2JA6 C;  4A3G C;  4BBR C;  2NVY K;  3GTO C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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