5TMCA

Re-refinement of thermus thermopiles dna-directed rna polymerase structure
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
231
structure length
231
Chain Sequence
MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
publication title On the validation of crystallographic symmetry and the quality of structures.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha
total genus 39
structure length 231
sequence length 231
chains with identical sequence B
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2016-10-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 5tmcA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 5tmcA01
1TWCC 2VUMC 2NVQC 2B63K 2JA7C 3S16K 1TWAC 4BBRK 4G7HA 2E2IK 3S14K 3GTMC 3WODA 3GTJK 4A3FK 3GTPK 4G7ZA 2R92K 1Y1VC 4A3JK 2YU9K 4BXXK 1WCMC 1SFOK 2NVXK 3HKZL 2WB1D 2NVYK 5C4XK 1TWFK 5FLMK 4OIQA 2JA8C 2Y0SL 4OIOA 4QIWD 5TMCA 2BE5A 3GTKK 4C3HC 1HQMA 2NVTC 3I4NC 1I6VA 3S1MC 4A3MC 3GTLC 5FJ8K 1Y1WC 4A3DK 3S15C 4C2MC 5IYBC 4Q4ZA 3DXJA 4BY7C 4GZYA 1YNNA 2O5JA 5IYCK 4A3CC 3GTOK 1K83K 3H0GC 3M4OC 3M3YC 3HOVK 3HOYC 5IYDC 1XPPA 4A3BC 3S2DC 2VUMK 2WAQD 4C3IC 4AYBL 4OIRA 5M5YK 4Y52K 5C44C 3S1NK 3HOWK 2PA8L 4KMUA 5IP9K 4X6AK 3HOZK 3HOUC 1I50C 2R93C 4A3LC 3K7AC 3RZDC 5C3EK 5C4JK 2E2JK 2JA5K 3PO2C 2JA6K 3GTQC 3CQZC 4A93C 1R9TC 3RZOC 1I3QC 3HOXC 4BY1K 2PMZD 4XLNA 3S2HC 3S1QC 1I6HC 4A3GC 3S17C 1TWGC 4KN7A 4G7OA 2O5IA 4A3IK 4KN4A 2YU9C 1TWHK 1BDFA 2E2HK 3S1RK 4ZH4A 2B63C 3S16C 2WB1L 5IP7K 5M3FK 4BBRC 1Y1WK 4NOIA 4XSXA 2E2IC 3S14C 3FKIK 4C2MK 4C3JK 2A69A 4Y7NK 4A3EK 4BBSK 1I6HK 3GTGK 4A3FC 3GTJC 3GTPC 2R7ZK 5M5WK 1IW7A 2R92C 4A3JC 4BXXC 5D4DA 1TWCK 3PO3K 2NVQK 4QJVA 1SFOC 3EQLA 2NVXC 5M5XK 2JA7K 5C4XC 2NVYC 1TWAK 1TWFC 5FLMC 4MEXA 2CW0A 3GTMK 3GTKC 1I50K 1Y1VK 1WCMK 3H3VL 4OIPA 3GTQK 3CQZK 2JA8K 3I4MC 4A3DC 3PO3C 5IYCC 4XSZA 2PA8D 5M3MK 4C3HK 3I4NK 3GTOC 2NVTK 1SMYA 1K83C 4QJVB 3S1MK 4A3MK 4A3KC 4LJZA 3HOVC 3GTLK 3HKZD 2Y0SD 3S15K 4OINA 1ZYRA 5IYBK 5TMFA 4Y52C 3S1NC 4QIWL 4BY7K 2PMZL 3HOWC 4MEYA 1YNJA 4A3CK 5IP9C 4X6AC 4XLPA 3H0GK 3HOZC 4YFNA 4Q5SA 5C3EC 4YG2A 5C4JC 2JA6C 3M3YK 3M4OK 2E2JC 2JA5C 3HOYK 5IYDK 4A3BK 3S2DK 2A68A 4C3IK 4LLGA 4YFKA 5C44K 4LK0A 4BY1C 3HOUK 2A6EA 4JK1A 2R93K 4A3IC 3K7AK 3RZDK 4A3LK 3PO2K 4LK1A 4YFXA 1TWHC 2E2HC 2A6HA 4AYBD 3S1RC 1R9TK 2WAQL 4A93K 3RZOK 1I3QK 5IP7C 3HOXK 3I4MK 3S2HK 3FKIC 4C3JC 4MQ9A 4Y7NC 2PPBA 3S1QK 4A3GK 4A3EC 4BBSC 1TWGK 3S17K 3GTGC 2R7ZC 4A3KK 3H3VD
chains in the Genus database with same CATH superfamily
2B63K 2JA7C 1O25A 1VRQC 3AH5A 3N3YA 4A3FK 1INNA 2R92K 3LAPA 4A3JK 3G4AA 1TWFK 2JA8C 3GIRA 5TMCA 1XZQB 4C45A 1HQMA 4DDQA 3GTLC 3LYWA 1XXCA 3T01A 2JA6A 5IYBC 2L3UA 2O5JA 2GSOA 2JH3A 4KB4A 1L0WA 3V4GA 3HOVK 4ILDA 4P5AA 4A3BC 3S2DC 1DCPA 3TFIA 3BP8C 4AYBL 1EI6A 1V5VA 3HOUC 5JVHS 4P5BA 2R93C 5C4JK 2JA6K 2E2JK 2D6FC 3PO2C 1F93A 1R9TC 3GTGA 3S1QC 1TWCA 4KN4A 2PHCB 2XCQA 1VGXA 4GTCA 5JVGS 4J3NA 2WB1L 5IP7K 5M3FK 1Y1VA 4XSXA 4C3JK 2KXYA 1WCMA 3ERED 1PJ5A 3GTGK 3GTJC 4U67S 1TWCK 3N0CA 1SFOC 5M5XK 2NVYC 5FLMC 2ZJQS 4KMAA 3DLLS 2KQ1A 4WFAS 3GTKC 1WQGA 1Y1VK 4WJ3M 1J6VA 1WCMK 4GTAA 1F7UA 4A3DC 5IYCC 1BS2A 4C3HK 1PJ6A 4A3MK 4KMHA 5EGHA 2L5NA 1I50A 1ZYRA 3JSTA 4Y52C 4QIWL 2PMZL 4MEYA 4IOAS 4BKWA 4XLPA 1G51A 1I3QA 3M3YK 3HOYK 4LLGA 4YFKA 5C44K 4BY1C 2YU9A 4A3LK 3RZDK 4KASA 2V6UA 2E2IA 4A93K 3FOEA 2WAQL 3RZOK 1I3QK 4MQ9A 4A3EC 4BBSC 1KQ4A 2YU9K 2NVQC 3FHZA 3S16K 1TWAC 1WOSA 4G7HA 2E2IK 3HKZL 3GTOA 1K83A 2Y0SL 4KARA 4QIWD 1IBAA 3I4NC 2NVTC 1I6VA 5E68A 2FQTA 5FJ8K 4LQYA 4WF9S 1Y1WC 4GFQA 3S15C 1WSRA 4BY7C 2JA5A 1YNNA 4KC6A 3GTOK 1K83K 4FM9A 2ZUFA 3OPFA 1EQRA 1YX2A 2ZJRS 2WAQD 4C3IC 3A8KA 5M5YK 3S0XA 3BUEA 3HOWK 1TWHA 2RGRA 5IP9K 3HOZK 1O2BA 5C3EK 1Y1WA 2JA5K 3HOXC 3AD8C 2R7ZA 3S2HC 4G0VA 4GTDA 3S17C 3Q3QA 1TWGC 2ZUEA 2JA7A 2O5IA 1J6XA 1TWHK 1HI9A 3IPJA 1O28A 1Y1WK 4BBRC 3S14C 3GTPC 2R7ZK 1IW7A 4BXXC 2JA7K 3EQLA 2NVXC 5C4XC 4GT9A 2CW0A 4IOCS 4KDDA 3GTLA 4KM9A 3A8IA 4OIPA 1IS1A 1O2FB 3TTGA 2JA8K 4FZBA 3I4MC 1IL2A 5M3MK 1O26A 4A3KC 2ZFZA 3GTLK 2R93A 4OINA 5IYBK 3S1NC 1YNJA 4X6AC 1R9TA 4Q5SA 1FEUA 3GSIA 4G0UA 4KB2A 3SZYA 2GAGC 4A3BK 3S2DK 3QX3A 1DCOA 3GEHA 4LK0A 4P9SA 3HOUK 2R93K 4A3IC 1ZXOA 3PO2K 4GTBA 3GEEA 2E2HC 3S1RC 4AYBD 1R9TK 1F7VA 3GTJA 3N0BA 3I4MK 3S1QK 3FKIC 4Y7NC 2PPBA 2V6TA 1USMA 1SFOA 4XCHA 4LOWA 2NVYA 1WOPA 1F9NA 4A3KK 3PO3C 2VUMC 3GTKA 1YCLA 5EGEA 2GSNA 2GSUA 3GTMC 3AQPA 1VH2A 5CJ9A 2KWAA 3WODA 1ISEA 4PABA 3GTJK 4WCES 1SFOK 2WB1D 2NVYK 5CHPA 5FLMK 4OIQA 4O2DA 4WFNS 1WSVA 4WILA 3GTKK 2VUMA 3SZZA 3S1MC 1XXBA 1B4BA 4A3DK 2RH6A 4Q4ZA 1BGWA 5IYCK 1DCHA 3AD7C 3NUHA 4A3CC 3GEIA 3H0GC 1XZPA 3M4OC 5IYDC 1XPPA 2VUMK 3AD9C 1VJEA 3TFHA 4Y52K 5DM7S 1VLOA 3K7AC 5HQHA 3ADAC 1O29A 2XCOA 1WORA 4BY1K 2PMZD 4XLNA 1XZPB 1I6HC 4A3GC 1JQWA 1TWAA 4WJ4A 1BDFA 4ZH4A 2B63C 1EFWA 2A69A 4A3EK 4BBSK 2W7VA 4A3FC 4LR2A 4G0WA 2R92C 4A3JC 5D4DA 2NVQK 2ZJPS 1J6WA 1IE0A 2P8TA 5L46A 1TWAK 1TWFC 4RMFA 1JOEA 3G4CA 4PAAA 5HL8A 2P5MA 1GE9A 3H3VL 3LAJA 4XSZA 1RU0A 5IOQA 3I4NK 2NVTK 3HOVC 3HKZD 2Y0SD 3S15K 4BY7K 5TMFA 1WOOA 1ZQ1C 1X31C 5C4JC 2JA6C 2E2JC 2A68A 3VA7A 4C3IK 1TWGA 5IORA 2V6SA 1O24A 3A8JA 4YFXA 3GTPA 5IP7C 3HOXK 3AQOA 3S2HK 4C3JC 3HXAA 4KATA 3BP3A 3S17K 2NVXA 1TWGK 1EK8A 3GTGC 3H3VD 1TWCC 4BBRK 3S14K 1ZVUA 4GTEA 5TJ3A 3FOFA 3GTPK 3TFJA 4G7ZA 1Y1VC 4BXXK 1B4AA 1WCMC 3MMLB 5DM6S 2NVXK 5C4XK 2XCRB 4OIOA 3T02A 2Y3PA 2BE5A 4C3HC 4A3MC 2GAHC 4IO9S 4C2MC 3DXJA 4GZYA 3LPXA 3OREA 3M3YC 1EH1A 3HOYC 3L4KA 3OEPA 4GTFA 4OIRA 5JVOA 5C44C 3S1NK 4KM8A 2PA8L 4KMUA 2E2HA 4X6AK 5JFEA 1I50C 4A3LC 3RZDC 3FKIA 3GTQC 3CQZC 4A93C 3CAGA 3RZOC 1I3QC 5IOTA 3GDZA 4A3IK 4KN7A 4G7OA 2CFAA 2YU9C 3T00A 1JVIA 2E2HK 2KPUA 3S1RK 3GTMA 3S16C 4KAWX 4NOIA 2E2IC 3FKIK 4M1XA 4C2MK 4Y7NK 4BLBA 3GTQA 3CQZA 5M5WK 1WQHA 3PO3K 1O2AA 4QJVA 4MEXA 3GTMK 2CFAB 1USOA 1UV7A 5IOSA 1I50K 1BJTA 3GTQK 1PJ7A 3CQZK 3PIPS 3H0GA 1IQ0A 4KMDA 2PA8D 4GTLA 3GTOC 3S1MK 1SMYA 1K83C 4QJVB 4BLAA 3L4JA 4WFBS 4LJZA 1ZBSA 3PIOS 1J98A 1DD5A 3HOWC 4A3CK 5IP9C 3H0GK 2EBBA 3HOZC 4YFNA 5C3EC 4YG2A 1WQFA 3M4OK 2JA5C 1O27A 5IYDK 5HL7S 2FQOA 2B63A 2A6EA 4JK1A 3K7AK 4LK1A 1TWHC 2A6HA 1WIHA 2R92A 1I6HK 4A3GK 1XXAA 4AH6A 1C0AA 1TWFA 1AB4A 2R7ZC 1XZQA 3CF5S
chains in the Genus database with same CATH topology
1TWCC 2VUMC 2NVQC 2B63K 2JA7C 3S16K 1TWAC 4BBRK 4G7HA 2E2IK 3S14K 3GTMC 3WODA 3GTJK 4A3FK 3GTPK 4G7ZA 2R92K 1Y1VC 4A3JK 2YU9K 4BXXK 1WCMC 1SFOK 2NVXK 3HKZL 2WB1D 2NVYK 5C4XK 1TWFK 5FLMK 4OIQA 2JA8C 2Y0SL 4OIOA 4QIWD 5TMCA 2BE5A 3GTKK 4C3HC 1HQMA 2NVTC 3I4NC 1I6VA 3S1MC 4A3MC 3GTLC 5FJ8K 1Y1WC 4A3DK 3S15C 4C2MC 5IYBC 4Q4ZA 3DXJA 4BY7C 4GZYA 1YNNA 2O5JA 5IYCK 4A3CC 3GTOK 1K83K 3H0GC 3M4OC 3M3YC 3HOVK 3HOYC 5IYDC 1XPPA 4A3BC 3S2DC 2VUMK 2WAQD 4C3IC 4AYBL 4OIRA 5M5YK 4Y52K 5C44C 3S1NK 3HOWK 2PA8L 4KMUA 5IP9K 4X6AK 3HOZK 3HOUC 1I50C 2R93C 4A3LC 3K7AC 3RZDC 5C3EK 5C4JK 2E2JK 2JA5K 3PO2C 2JA6K 3GTQC 3CQZC 4A93C 1R9TC 3RZOC 1I3QC 3HOXC 4BY1K 2PMZD 4XLNA 3S2HC 3S1QC 1I6HC 4A3GC 3S17C 1TWGC 4KN7A 4G7OA 2O5IA 4A3IK 4KN4A 2YU9C 1TWHK 1BDFA 2E2HK 3S1RK 4ZH4A 2B63C 3S16C 2WB1L 5IP7K 5M3FK 4BBRC 1Y1WK 4NOIA 4XSXA 2E2IC 3S14C 3FKIK 4C2MK 4C3JK 2A69A 4Y7NK 4A3EK 4BBSK 1I6HK 3GTGK 4A3FC 3GTJC 3GTPC 2R7ZK 5M5WK 1IW7A 2R92C 4A3JC 4BXXC 5D4DA 1TWCK 3PO3K 2NVQK 4QJVA 1SFOC 3EQLA 2NVXC 5M5XK 2JA7K 5C4XC 2NVYC 1TWAK 1TWFC 5FLMC 4MEXA 2CW0A 3GTMK 3GTKC 1I50K 1Y1VK 1WCMK 3H3VL 4OIPA 3GTQK 3CQZK 2JA8K 3I4MC 4A3DC 3PO3C 5IYCC 4XSZA 2PA8D 5M3MK 4C3HK 3I4NK 3GTOC 2NVTK 1SMYA 1K83C 4QJVB 3S1MK 4A3MK 4A3KC 4LJZA 3HOVC 3GTLK 3HKZD 2Y0SD 3S15K 4OINA 1ZYRA 5IYBK 5TMFA 4Y52C 3S1NC 4QIWL 4BY7K 2PMZL 3HOWC 4MEYA 1YNJA 4A3CK 5IP9C 4X6AC 4XLPA 3H0GK 3HOZC 4YFNA 4Q5SA 5C3EC 4YG2A 5C4JC 2JA6C 3M3YK 3M4OK 2E2JC 2JA5C 3HOYK 5IYDK 4A3BK 3S2DK 2A68A 4C3IK 4LLGA 4YFKA 5C44K 4LK0A 4BY1C 3HOUK 2A6EA 4JK1A 2R93K 4A3IC 3K7AK 3RZDK 4A3LK 3PO2K 4LK1A 4YFXA 1TWHC 2E2HC 2A6HA 4AYBD 3S1RC 1R9TK 2WAQL 4A93K 3RZOK 1I3QK 5IP7C 3HOXK 3I4MK 3S2HK 3FKIC 4C3JC 4MQ9A 4Y7NC 2PPBA 3S1QK 4A3GK 4A3EC 4BBSC 1TWGK 3S17K 3GTGC 2R7ZC 4A3KK 3H3VD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWC C;  2VUM C;  2NVQ C;  2B63 K;  2JA7 C;  3S16 K;  1TWA C;  4BBR K;  4G7H A;  2E2I K;  3S14 K;  3GTM C;  3WOD A;  3GTJ K;  4A3F K;  3GTP K;  4G7Z A;  2R92 K;  1Y1V C;  4A3J K;  2YU9 K;  4BXX K;  1WCM C;  1SFO K;  2NVX K;  3HKZ L;  2WB1 D;  2NVY K;  5C4X K;  1TWF K;  5FLM K;  4OIQ A;  2JA8 C;  2Y0S L;  4OIO A;  4QIW D;  5TMC A;  2BE5 A;  3GTK K;  4C3H C;  1HQM A;  2NVT C;  3I4N C;  1I6V A;  3S1M C;  4A3M C;  3GTL C;  5FJ8 K;  1Y1W C;  4A3D K;  3S15 C;  4C2M C;  5IYB C;  4Q4Z A;  3DXJ A;  4BY7 C;  4GZY A;  1YNN A;  2O5J A;  5IYC K;  4A3C C;  3GTO K;  1K83 K;  3H0G C;  3M4O C;  3M3Y C;  3HOV K;  3HOY C;  5IYD C;  1XPP A;  4A3B C;  3S2D C;  2VUM K;  2WAQ D;  4C3I C;  4AYB L;  4OIR A;  5M5Y K;  4Y52 K;  5C44 C;  3S1N K;  3HOW K;  2PA8 L;  4KMU A;  5IP9 K;  4X6A K;  3HOZ K;  3HOU C;  1I50 C;  2R93 C;  4A3L C;  3K7A C;  3RZD C;  5C3E K;  5C4J K;  2E2J K;  2JA5 K;  3PO2 C;  2JA6 K;  3GTQ C;  3CQZ C;  4A93 C;  1R9T C;  3RZO C;  1I3Q C;  3HOX C;  4BY1 K;  2PMZ D;  4XLN A;  3S2H C;  3S1Q C;  1I6H C;  4A3G C;  3S17 C;  1TWG C;  4KN7 A;  4G7O A;  2O5I A;  4A3I K;  4KN4 A;  2YU9 C;  1TWH K;  1BDF A;  2E2H K;  3S1R K;  4ZH4 A;  2B63 C;  3S16 C;  2WB1 L;  5IP7 K;  5M3F K;  4BBR C;  1Y1W K;  4NOI A;  4XSX A;  2E2I C;  3S14 C;  3FKI K;  4C2M K;  4C3J K;  2A69 A;  4Y7N K;  4A3E K;  4BBS K;  1I6H K;  3GTG K;  4A3F C;  3GTJ C;  3GTP C;  2R7Z K;  5M5W K;  1IW7 A;  2R92 C;  4A3J C;  4BXX C;  5D4D A;  1TWC K;  3PO3 K;  2NVQ K;  4QJV A;  1SFO C;  3EQL A;  2NVX C;  5M5X K;  2JA7 K;  5C4X C;  2NVY C;  1TWA K;  1TWF C;  5FLM C;  4MEX A;  2CW0 A;  3GTM K;  3GTK C;  1I50 K;  1Y1V K;  1WCM K;  3H3V L;  4OIP A;  3GTQ K;  3CQZ K;  2JA8 K;  3I4M C;  4A3D C;  3PO3 C;  5IYC C;  4XSZ A;  2PA8 D;  5M3M K;  4C3H K;  3I4N K;  3GTO C;  2NVT K;  1SMY A;  1K83 C;  4QJV B;  3S1M K;  4A3M K;  4A3K C;  4LJZ A;  3HOV C;  3GTL K;  3HKZ D;  2Y0S D;  3S15 K;  4OIN A;  1ZYR A;  5IYB K;  5TMF A;  4Y52 C;  3S1N C;  4QIW L;  4BY7 K;  2PMZ L;  3HOW C;  4MEY A;  1YNJ A;  4A3C K;  5IP9 C;  4X6A C;  4XLP A;  3H0G K;  3HOZ C;  4YFN A;  4Q5S A;  5C3E C;  4YG2 A;  5C4J C;  2JA6 C;  3M3Y K;  3M4O K;  2E2J C;  2JA5 C;  3HOY K;  5IYD K;  4A3B K;  3S2D K;  2A68 A;  4C3I K;  4LLG A;  4YFK A;  5C44 K;  4LK0 A;  4BY1 C;  3HOU K;  2A6E A;  4JK1 A;  2R93 K;  4A3I C;  3K7A K;  3RZD K;  4A3L K;  3PO2 K;  4LK1 A;  4YFX A;  1TWH C;  2E2H C;  2A6H A;  4AYB D;  3S1R C;  1R9T K;  2WAQ L;  4A93 K;  3RZO K;  1I3Q K;  5IP7 C;  3HOX K;  3I4M K;  3S2H K;  3FKI C;  4C3J C;  4MQ9 A;  4Y7N C;  2PPB A;  3S1Q K;  4A3G K;  4A3E C;  4BBS C;  1TWG K;  3S17 K;  3GTG C;  2R7Z C;  4A3K K;  3H3V D; 
#chains in the Genus database with same CATH topology
 2B63 K;  2JA7 C;  1O25 A;  1VRQ C;  3AH5 A;  3N3Y A;  4A3F K;  1INN A;  2R92 K;  3LAP A;  4A3J K;  3G4A A;  1TWF K;  2JA8 C;  3GIR A;  5TMC A;  1XZQ B;  4C45 A;  1HQM A;  4DDQ A;  3GTL C;  3LYW A;  1XXC A;  3T01 A;  2JA6 A;  5IYB C;  2L3U A;  2O5J A;  2GSO A;  2JH3 A;  4KB4 A;  1L0W A;  3V4G A;  3HOV K;  4ILD A;  4P5A A;  4A3B C;  3S2D C;  1DCP A;  3TFI A;  3BP8 C;  4AYB L;  1EI6 A;  1V5V A;  3HOU C;  5JVH S;  4P5B A;  2R93 C;  5C4J K;  2JA6 K;  2E2J K;  2D6F C;  3PO2 C;  1F93 A;  1R9T C;  3GTG A;  3S1Q C;  1TWC A;  4KN4 A;  2PHC B;  2XCQ A;  1VGX A;  4GTC A;  5JVG S;  4J3N A;  2WB1 L;  5IP7 K;  5M3F K;  1Y1V A;  4XSX A;  4C3J K;  2KXY A;  1WCM A;  3ERE D;  1PJ5 A;  3GTG K;  3GTJ C;  4U67 S;  1TWC K;  3N0C A;  1SFO C;  5M5X K;  2NVY C;  5FLM C;  2ZJQ S;  4KMA A;  3DLL S;  2KQ1 A;  4WFA S;  3GTK C;  1WQG A;  1Y1V K;  4WJ3 M;  1J6V A;  1WCM K;  4GTA A;  1F7U A;  4A3D C;  5IYC C;  1BS2 A;  4C3H K;  1PJ6 A;  4A3M K;  4KMH A;  5EGH A;  2L5N A;  1I50 A;  1ZYR A;  3JST A;  4Y52 C;  4QIW L;  2PMZ L;  4MEY A;  4IOA S;  4BKW A;  4XLP A;  1G51 A;  1I3Q A;  3M3Y K;  3HOY K;  4LLG A;  4YFK A;  5C44 K;  4BY1 C;  2YU9 A;  4A3L K;  3RZD K;  4KAS A;  2V6U A;  2E2I A;  4A93 K;  3FOE A;  2WAQ L;  3RZO K;  1I3Q K;  4MQ9 A;  4A3E C;  4BBS C;  1KQ4 A;  2YU9 K;  2NVQ C;  3FHZ A;  3S16 K;  1TWA C;  1WOS A;  4G7H A;  2E2I K;  3HKZ L;  3GTO A;  1K83 A;  2Y0S L;  4KAR A;  4QIW D;  1IBA A;  3I4N C;  2NVT C;  1I6V A;  5E68 A;  2FQT A;  5FJ8 K;  4LQY A;  4WF9 S;  1Y1W C;  4GFQ A;  3S15 C;  1WSR A;  4BY7 C;  2JA5 A;  1YNN A;  4KC6 A;  3GTO K;  1K83 K;  4FM9 A;  2ZUF A;  3OPF A;  1EQR A;  1YX2 A;  2ZJR S;  2WAQ D;  4C3I C;  3A8K A;  5M5Y K;  3S0X A;  3BUE A;  3HOW K;  1TWH A;  2RGR A;  5IP9 K;  3HOZ K;  1O2B A;  5C3E K;  1Y1W A;  2JA5 K;  3HOX C;  3AD8 C;  2R7Z A;  3S2H C;  4G0V A;  4GTD A;  3S17 C;  3Q3Q A;  1TWG C;  2ZUE A;  2JA7 A;  2O5I A;  1J6X A;  1TWH K;  1HI9 A;  3IPJ A;  1O28 A;  1Y1W K;  4BBR C;  3S14 C;  3GTP C;  2R7Z K;  1IW7 A;  4BXX C;  2JA7 K;  3EQL A;  2NVX C;  5C4X C;  4GT9 A;  2CW0 A;  4IOC S;  4KDD A;  3GTL A;  4KM9 A;  3A8I A;  4OIP A;  1IS1 A;  1O2F B;  3TTG A;  2JA8 K;  4FZB A;  3I4M C;  1IL2 A;  5M3M K;  1O26 A;  4A3K C;  2ZFZ A;  3GTL K;  2R93 A;  4OIN A;  5IYB K;  3S1N C;  1YNJ A;  4X6A C;  1R9T A;  4Q5S A;  1FEU A;  3GSI A;  4G0U A;  4KB2 A;  3SZY A;  2GAG C;  4A3B K;  3S2D K;  3QX3 A;  1DCO A;  3GEH A;  4LK0 A;  4P9S A;  3HOU K;  2R93 K;  4A3I C;  1ZXO A;  3PO2 K;  4GTB A;  3GEE A;  2E2H C;  3S1R C;  4AYB D;  1R9T K;  1F7V A;  3GTJ A;  3N0B A;  3I4M K;  3S1Q K;  3FKI C;  4Y7N C;  2PPB A;  2V6T A;  1USM A;  1SFO A;  4XCH A;  4LOW A;  2NVY A;  1WOP A;  1F9N A;  4A3K K;  3PO3 C;  2VUM C;  3GTK A;  1YCL A;  5EGE A;  2GSN A;  2GSU A;  3GTM C;  3AQP A;  1VH2 A;  5CJ9 A;  2KWA A;  3WOD A;  1ISE A;  4PAB A;  3GTJ K;  4WCE S;  1SFO K;  2WB1 D;  2NVY K;  5CHP A;  5FLM K;  4OIQ A;  4O2D A;  4WFN S;  1WSV A;  4WIL A;  3GTK K;  2VUM A;  3SZZ A;  3S1M C;  1XXB A;  1B4B A;  4A3D K;  2RH6 A;  4Q4Z A;  1BGW A;  5IYC K;  1DCH A;  3AD7 C;  3NUH A;  4A3C C;  3GEI A;  3H0G C;  1XZP A;  3M4O C;  5IYD C;  1XPP A;  2VUM K;  3AD9 C;  1VJE A;  3TFH A;  4Y52 K;  5DM7 S;  1VLO A;  3K7A C;  5HQH A;  3ADA C;  1O29 A;  2XCO A;  1WOR A;  4BY1 K;  2PMZ D;  4XLN A;  1XZP B;  1I6H C;  4A3G C;  1JQW A;  1TWA A;  4WJ4 A;  1BDF A;  4ZH4 A;  2B63 C;  1EFW A;  2A69 A;  4A3E K;  4BBS K;  2W7V A;  4A3F C;  4LR2 A;  4G0W A;  2R92 C;  4A3J C;  5D4D A;  2NVQ K;  2ZJP S;  1J6W A;  1IE0 A;  2P8T A;  5L46 A;  1TWA K;  1TWF C;  4RMF A;  1JOE A;  3G4C A;  4PAA A;  5HL8 A;  2P5M A;  1GE9 A;  3H3V L;  3LAJ A;  4XSZ A;  1RU0 A;  5IOQ A;  3I4N K;  2NVT K;  3HOV C;  3HKZ D;  2Y0S D;  3S15 K;  4BY7 K;  5TMF A;  1WOO A;  1ZQ1 C;  1X31 C;  5C4J C;  2JA6 C;  2E2J C;  2A68 A;  3VA7 A;  4C3I K;  1TWG A;  5IOR A;  2V6S A;  1O24 A;  3A8J A;  4YFX A;  3GTP A;  5IP7 C;  3HOX K;  3AQO A;  3S2H K;  4C3J C;  3HXA A;  4KAT A;  3BP3 A;  3S17 K;  2NVX A;  1TWG K;  1EK8 A;  3GTG C;  3H3V D;  1TWC C;  4BBR K;  3S14 K;  1ZVU A;  4GTE A;  5TJ3 A;  3FOF A;  3GTP K;  3TFJ A;  4G7Z A;  1Y1V C;  4BXX K;  1B4A A;  1WCM C;  3MML B;  5DM6 S;  2NVX K;  5C4X K;  2XCR B;  4OIO A;  3T02 A;  2Y3P A;  2BE5 A;  4C3H C;  4A3M C;  2GAH C;  4IO9 S;  4C2M C;  3DXJ A;  4GZY A;  3LPX A;  3ORE A;  3M3Y C;  1EH1 A;  3HOY C;  3L4K A;  3OEP A;  4GTF A;  4OIR A;  5JVO A;  5C44 C;  3S1N K;  4KM8 A;  2PA8 L;  4KMU A;  2E2H A;  4X6A K;  5JFE A;  1I50 C;  4A3L C;  3RZD C;  3FKI A;  3GTQ C;  3CQZ C;  4A93 C;  3CAG A;  3RZO C;  1I3Q C;  5IOT A;  3GDZ A;  4A3I K;  4KN7 A;  4G7O A;  2CFA A;  2YU9 C;  3T00 A;  1JVI A;  2E2H K;  2KPU A;  3S1R K;  3GTM A;  3S16 C;  4KAW X;  4NOI A;  2E2I C;  3FKI K;  4M1X A;  4C2M K;  4Y7N K;  4BLB A;  3GTQ A;  3CQZ A;  5M5W K;  1WQH A;  3PO3 K;  1O2A A;  4QJV A;  4MEX A;  3GTM K;  2CFA B;  1USO A;  1UV7 A;  5IOS A;  1I50 K;  1BJT A;  3GTQ K;  1PJ7 A;  3CQZ K;  3PIP S;  3H0G A;  1IQ0 A;  4KMD A;  2PA8 D;  4GTL A;  3GTO C;  3S1M K;  1SMY A;  1K83 C;  4QJV B;  4BLA A;  3L4J A;  4WFB S;  4LJZ A;  1ZBS A;  3PIO S;  1J98 A;  1DD5 A;  3HOW C;  4A3C K;  5IP9 C;  3H0G K;  2EBB A;  3HOZ C;  4YFN A;  5C3E C;  4YG2 A;  1WQF A;  3M4O K;  2JA5 C;  1O27 A;  5IYD K;  5HL7 S;  2FQO A;  2B63 A;  2A6E A;  4JK1 A;  3K7A K;  4LK1 A;  1TWH C;  2A6H A;  1WIH A;  2R92 A;  1I6H K;  4A3G K;  1XXA A;  4AH6 A;  1C0A A;  1TWF A;  1AB4 A;  2R7Z C;  1XZQ A;  3CF5 S; 
#chains in the Genus database with same CATH homology
 1TWC C;  2VUM C;  2NVQ C;  2B63 K;  2JA7 C;  3S16 K;  1TWA C;  4BBR K;  4G7H A;  2E2I K;  3S14 K;  3GTM C;  3WOD A;  3GTJ K;  4A3F K;  3GTP K;  4G7Z A;  2R92 K;  1Y1V C;  4A3J K;  2YU9 K;  4BXX K;  1WCM C;  1SFO K;  2NVX K;  3HKZ L;  2WB1 D;  2NVY K;  5C4X K;  1TWF K;  5FLM K;  4OIQ A;  2JA8 C;  2Y0S L;  4OIO A;  4QIW D;  5TMC A;  2BE5 A;  3GTK K;  4C3H C;  1HQM A;  2NVT C;  3I4N C;  1I6V A;  3S1M C;  4A3M C;  3GTL C;  5FJ8 K;  1Y1W C;  4A3D K;  3S15 C;  4C2M C;  5IYB C;  4Q4Z A;  3DXJ A;  4BY7 C;  4GZY A;  1YNN A;  2O5J A;  5IYC K;  4A3C C;  3GTO K;  1K83 K;  3H0G C;  3M4O C;  3M3Y C;  3HOV K;  3HOY C;  5IYD C;  1XPP A;  4A3B C;  3S2D C;  2VUM K;  2WAQ D;  4C3I C;  4AYB L;  4OIR A;  5M5Y K;  4Y52 K;  5C44 C;  3S1N K;  3HOW K;  2PA8 L;  4KMU A;  5IP9 K;  4X6A K;  3HOZ K;  3HOU C;  1I50 C;  2R93 C;  4A3L C;  3K7A C;  3RZD C;  5C3E K;  5C4J K;  2E2J K;  2JA5 K;  3PO2 C;  2JA6 K;  3GTQ C;  3CQZ C;  4A93 C;  1R9T C;  3RZO C;  1I3Q C;  3HOX C;  4BY1 K;  2PMZ D;  4XLN A;  3S2H C;  3S1Q C;  1I6H C;  4A3G C;  3S17 C;  1TWG C;  4KN7 A;  4G7O A;  2O5I A;  4A3I K;  4KN4 A;  2YU9 C;  1TWH K;  1BDF A;  2E2H K;  3S1R K;  4ZH4 A;  2B63 C;  3S16 C;  2WB1 L;  5IP7 K;  5M3F K;  4BBR C;  1Y1W K;  4NOI A;  4XSX A;  2E2I C;  3S14 C;  3FKI K;  4C2M K;  4C3J K;  2A69 A;  4Y7N K;  4A3E K;  4BBS K;  1I6H K;  3GTG K;  4A3F C;  3GTJ C;  3GTP C;  2R7Z K;  5M5W K;  1IW7 A;  2R92 C;  4A3J C;  4BXX C;  5D4D A;  1TWC K;  3PO3 K;  2NVQ K;  4QJV A;  1SFO C;  3EQL A;  2NVX C;  5M5X K;  2JA7 K;  5C4X C;  2NVY C;  1TWA K;  1TWF C;  5FLM C;  4MEX A;  2CW0 A;  3GTM K;  3GTK C;  1I50 K;  1Y1V K;  1WCM K;  3H3V L;  4OIP A;  3GTQ K;  3CQZ K;  2JA8 K;  3I4M C;  4A3D C;  3PO3 C;  5IYC C;  4XSZ A;  2PA8 D;  5M3M K;  4C3H K;  3I4N K;  3GTO C;  2NVT K;  1SMY A;  1K83 C;  4QJV B;  3S1M K;  4A3M K;  4A3K C;  4LJZ A;  3HOV C;  3GTL K;  3HKZ D;  2Y0S D;  3S15 K;  4OIN A;  1ZYR A;  5IYB K;  5TMF A;  4Y52 C;  3S1N C;  4QIW L;  4BY7 K;  2PMZ L;  3HOW C;  4MEY A;  1YNJ A;  4A3C K;  5IP9 C;  4X6A C;  4XLP A;  3H0G K;  3HOZ C;  4YFN A;  4Q5S A;  5C3E C;  4YG2 A;  5C4J C;  2JA6 C;  3M3Y K;  3M4O K;  2E2J C;  2JA5 C;  3HOY K;  5IYD K;  4A3B K;  3S2D K;  2A68 A;  4C3I K;  4LLG A;  4YFK A;  5C44 K;  4LK0 A;  4BY1 C;  3HOU K;  2A6E A;  4JK1 A;  2R93 K;  4A3I C;  3K7A K;  3RZD K;  4A3L K;  3PO2 K;  4LK1 A;  4YFX A;  1TWH C;  2E2H C;  2A6H A;  4AYB D;  3S1R C;  1R9T K;  2WAQ L;  4A93 K;  3RZO K;  1I3Q K;  5IP7 C;  3HOX K;  3I4M K;  3S2H K;  3FKI C;  4C3J C;  4MQ9 A;  4Y7N C;  2PPB A;  3S1Q K;  4A3G K;  4A3E C;  4BBS C;  1TWG K;  3S17 K;  3GTG C;  2R7Z C;  4A3K K;  3H3V D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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