1Y1WC

Complete rna polymerase ii elongation complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1wC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1wC01
5C44C 3RZOC 2R92C 3I4MK 4A3GK 4C3IK 2PMZL 3CQZK 3HOVK 5C4JC 2O5IA 2A6EA 2E2JC 4C3HK 4A3DC 3M4OK 4QJVB 1I50K 4QIWL 1I6VA 2R93K 2B63C 2VUMC 1BDFA 2JA7C 3H3VD 4LJZA 2Y0SD 3HKZL 3RZDK 2B63K 4A3KK 2NVYK 5C3EK 1Y1VC 1TWFC 3HOUK 3FKIC 4NOIA 3S16K 4C3JC 5C3EC 4OIQA 3HOWK 3S2DK 3PO2C 4A3MK 1TWGC 4A3FK 2R7ZK 2BE5A 3K7AK 1SMYA 4GZYA 3HOWC 4YFXA 4A3JC 4MEXA 3GTMC 4A3MC 4BXXC 3GTGC 4A3FC 1TWGK 3GTJK 3PO2K 4Y52K 1WCMC 3HOXK 5FLMK 4Y7NC 5IP9C 2CW0A 3HKZD 4XSZA 4Y52C 3M3YC 3I4NC 2WAQL 2JA6K 3PO3K 4A3CK 5FLMC 4A3IC 4Q4ZA 3GTKK 3PO3C 3S15C 4YFKA 1YNNA 1SFOK 5C4JK 3S1QC 5D4DA 4C3HC 2E2JK 5TMFA 1ZYRA 1TWHC 4C2MC 1I6HC 3H0GK 4MEYA 3RZDC 4OINA 2PA8L 4A3KC 4JK1A 1TWAC 5M3FK 4QJVA 2NVXC 4BBSK 2YU9C 4C3JK 4KN7A 2E2HK 3S1RK 4AYBD 3HOZK 5IYDC 3GTQC 1TWCK 1IW7A 3GTLC 5IP7K 1R9TC 4X6AC 3S14K 3GTMK 4BXXK 5IP7C 2NVQC 3GTPK 3S1MK 2PPBA 1R9TK 4A3LK 4YFNA 4BY1K 4A3BC 4A93K 3S14C 4C3IC 3HOVC 3HOYC 4YG2A 3M3YK 4A3BK 3CQZC 4BBRK 1K83C 5M5WK 3GTKC 4LK1A 1SFOC 4LK0A 1YNJA 2WB1L 5FJ8K 2VUMK 2JA8K 1K83K 5IYCK 2NVQK 5C4XK 3S1QK 4C2MK 3S17C 3S1NK 3S16C 1Y1WC 3H0GC 2E2IC 1TWHK 1TWFK 2NVTK 1I6HK 4BBSC 3S1NC 3S17K 1XPPA 3K7AC 2NVXK 4BY7K 4A3JK 3GTOC 4OIPA 3GTJC 3GTGK 5M3MK 5M5YK 5IYBK 3S2HK 1TWCC 3DXJA 2A6HA 4BY7C 4XLPA 3GTQK 5IYDK 2R92K 5TMCA 4ZH4A 5IYBC 2WAQD 3I4MC 4A3CC 4A3GC 2JA6C 5IP9K 4Y7NK 4A3LC 3I4NK 4G7OA 4MQ9A 4BY1C 4A93C 4KN4A 3S15K 4A3IK 3M4OC 4A3DK 3H3VL 1I50C 2R93C 3FKIK 2JA7K 2A69A 4BBRC 4G7ZA 3HOYK 4Q5SA 1I3QK 4QIWD 4XSXA 3HOUC 1Y1VK 3S1MC 3EQLA 2A68A 2JA8C 2NVYC 1I3QC 4OIOA 2PMZD 5IYCC 2WB1D 2JA5C 4OIRA 1TWAK 5M5XK 2YU9K 4LLGA 2R7ZC 5C4XC 2Y0SL 3S2DC 2JA5K 2NVTC 3S1RC 4AYBL 4XLNA 1Y1WK 2E2IK 4A3EK 2E2HC 3GTLK 3HOZC 4G7HA 2O5JA 3HOXC 1WCMK 5C44K 3RZOK 4A3EC 3S2HC 3GTPC 2PA8D 3WODA 3GTOK 4KMUA 1HQMA 4X6AK
chains in the Genus database with same CATH superfamily
1TWCA 4KAWX 1XZQA 3I4MK 1WQHA 3HOVK 2ZJPS 2L5NA 5DM6S 4C3HK 3M4OK 4QJVB 3IPJA 4QIWL 1I6VA 2VUMC 4LJZA 3HKZL 5TJ3A 4IOCS 1TWFC 1F93A 1I50A 4P5AA 4C3JC 3HOWK 3GTMA 4A3FK 2BE5A 3K7AK 1SMYA 2CFAA 4A3MC 3PO2K 1Y1WA 3A8IA 3GEEA 5IP9C 4Y7NC 3I4NC 3AH5A 4XSZA 1EH1A 1IQ0A 4Q4ZA 3GTKK 5HL8A 3AD8C 2FQOA 5C4JK 2E2JK 1ZYRA 3H0GA 1TWHC 1I6HC 3N3YA 1V5VA 4JK1A 1ZXOA 2NVXC 3LYWA 1UV7A 4DDQA 3HOZK 1GE9A 2L3UA 1TWCK 2R7ZA 3S0XA 5IP7C 2EBBA 4KATA 1R9TK 4RMFA 2CFAB 3S14C 5DM7S 3HOVC 3TFIA 3HOYC 4YG2A 1Y1VA 1WSRA 4A3BK 1YNJA 2WB1L 3LPXA 3SZZA 1ZVUA 4P9SA 3GTKA 1ZQ1C 3G4AA 4C2MK 3MMLB 4BKWA 3S17C 3S1NK 4GTDA 3H0GC 4KM9A 3GSIA 5IOQA 1O2BA 3GTOC 3GTGK 5M5YK 3DXJA 5TMCA 4A3GC 3GTJA 4U67S 4LOWA 4WCES 4A3DK 4WFAS 3H3VL 1I50C 1XZPA 2GSUA 1DCPA 4WILA 2YU9A 1I3QA 3FKIK 2NVYC 4OIOA 2PMZD 2WB1D 4BLBA 5M5XK 4LLGA 2R7ZC 5C4XC 4KDDA 1PJ6A 5CJ9A 4G7HA 5JVGS 2R92A 3WODA 1J6WA 1FEUA 1IBAA 4X6AK 5C44C 2ZJRS 2JH3A 1WQGA 5IORA 3CQZK 3GEHA 2A6EA 1AB4A 4A3DC 1I50K 3FHZA 3HXAA 2Y0SD 3Q3QA 4PAAA 3FOEA 2NVYK 5C3EK 1Y1VC 3HOUK 1SFOA 3L4JA 3PO2C 4A3MK 1TWGC 4YFXA 3GTMC 4BXXC 1EFWA 1DD5A 3GTJK 1DCHA 2E2IA 4Y52K 1WCMC 2WAQL 4A3CK 3GTLA 4KASA 2E2HA 4A3IC 2XCOA 3S15C 4YFKA 1YNNA 1PJ7A 1O26A 1VLOA 5D4DA 1TWAA 2PHCB 4C2MC 4MEYA 1BGWA 4OINA 4A3KC 3AD7C 2YU9C 1G51A 3AQPA 2E2HK 1EQRA 2ZUFA 5IYDC 4FM9A 1WORA 4X6AC 1YX2A 2NVQC 3GTPK 3S1MK 4A3LK 4GT9A 4A3BC 3TFHA 4A93K 4BBRK 1F9NA 3GTKC 1B4BA 3GIRA 4KMAA 1L0WA 4KM8A 5FJ8K 1IL2A 1C0AA 2V6TA 2JA8K 1K83K 3S1QK 2V6SA 1Y1WC 2E2IC 1XZPB 2KXYA 5JFEA 3K7AC 4G0UA 1VH2A 5M3MK 4BY7C 2R92K 5IYBC 2WAQD 4A3CC 4KB4A 2JA6C 4A3LC 3GEIA 4A93C 1WOPA 5L46A 4KN4A 1EI6A 2KWAA 2P5MA 1TWFA 4BBRC 2ZJQS 4G7ZA 4WFNS 1I3QK 3HOYK 4XSXA 3BUEA 3FKIA 2A68A 2JA8C 3BP3A 5IYCC 2YU9K 2Y0SL 2KPUA 4GTFA 4XLNA 3A8JA 4A3EK 1WCMK 5C44K 4ILDA 3T00A 3S1MC 3GTPC 4M1XA 2NVQK 3RZOC 1PJ5A 1ISEA 3GTGA 5EGHA 4A3GK 4C3IK 5IOSA 2E2JC 1KQ4A 2GAHC 1HI9A 4P5BA 1BDFA 2JA7C 2B63K 1WSVA 4A3KK 4C45A 4KARA 2R93A 3FKIC 3L4KA 4OIQA 4IOAS 3TTGA 2R7ZK 1WCMA 4GZYA 3SZYA 3HOWC 4MEXA 4A3JC 4PABA 4A3FC 3PIOS 3HKZD 3M3YC 1BS2A 5FLMC 2NVYA 1IS1A 3PO3C 2GSOA 1JOEA 1XXCA 1RU0A 1WIHA 2GAGC 4C3HC 2P8TA 5TMFA 3CQZA 3H0GK 1XXAA 2VUMA 3RZDC 2PA8L 3CF5S 4QJVA 3ADAC 1O27A 4KN7A 3S1RK 3N0BA 4BLAA 1IW7A 3GTLC 5IP7K 1R9TC 3TFJA 1F7VA 4IO9S 3GTMK 3S14K 4BXXK 3GTQA 2PPBA 4YFNA 2FQTA 2V6UA 4KC6A 3LAJA 1K83C 5M5WK 1WOOA 5IYCK 5C4XK 1TWHK 1I6HK 1TWFK 2NVTK 3GTPA 4BBSC 3S1NC 4KMUA 1F7UA 1XPPA 3S17K 3OREA 2NVXK 4BY7K 4A3JK 4OIPA 3GTJC 1VRQC 2RGRA 3S2HK 3GTQK 2A6HA 3DLLS 4O2DA 5IYDK 5CHPA 3I4MC 5IP9K 4Y7NK 3I4NK 4G7OA 4MQ9A 4BY1C 3OEPA 5HL7S 1INNA 2B63A 3S15K 4KMDA 2R93C 2A69A 1O24A 4Q5SA 3HOUC 1Y1VK 4WJ4A 4OIRA 4GTLA 2ZUEA 1R9TA 2JA5K 3S2DC 2JA7A 2NVTC 4AYBL 2E2IK 2O5JA 3RZOK 3GDZA 3S2HC 3GTOK 3GTOA 4WJ3M 1EK8A 2D6FC 1USOA 2R92C 3BP8C 3AQOA 2PMZL 4GTBA 5C4JC 2O5IA 4WFBS 1J6XA 3N0CA 2R93K 2B63C 3A8KA 3ERED 3H3VD 3RZDK 4G0VA 4GTAA 1YCLA 5EGEA 4NOIA 3S16K 2XCQA 5C3EC 3S2DK 3GTGC 1O25A 1TWGK 3OPFA 4J3NA 1O29A 3HOXK 5FLMK 1O28A 2CW0A 2JA6K 4Y52C 3PO3K 1J98A 1USMA 1SFOK 1TWHA 1JVIA 1DCOA 3S1QC 1VGXA 1WOSA 1B4AA 4LR2A 3PIPS 1TWAC 5M3FK 4GTEA 4BBSK 4C3JK 4XCHA 1BJTA 4AYBD 2Y3PA 3GTQC 5IOTA 3FOFA 2JA6A 4KMHA 1J6VA 3QX3A 5JVHS 1TWGA 1IE0A 2RH6A 4BY1K 2GSNA 1X31C 4C3IC 4AH6A 3M3YK 3CQZC 1O2AA 3JSTA 4LK1A 1SFOC 4FZBA 4LK0A 1O2FB 2XCRB 2VUMK 1K83A 1XXBA 4LQYA 3S16C 3LAPA 4GTCA 1ZBSA 3T02A 5IYBK 1JQWA 1TWCC 4XLPA 3NUHA 5JVOA 4ZH4A 3G4CA 2ZFZA 3VA7A 3AD9C 3V4GA 4A3IK 3M4OC 3CAGA 4GFQA 2JA7K 2JA5A 4WF9S 4QIWD 4KB2A 4G0WA 3EQLA 3T01A 1I3QC 2JA5C 1TWAK 1VJEA 3S1RC 1Y1WK 1XZQB 2E2HC 2W7VA 3GTLK 3HOZC 2KQ1A 5E68A 3HOXC 2NVXA 4A3EC 2PA8D 1WQFA 1HQMA 5HQHA
chains in the Genus database with same CATH topology
5C44C 3RZOC 2R92C 3I4MK 4A3GK 4C3IK 2PMZL 3CQZK 3HOVK 5C4JC 2O5IA 2A6EA 2E2JC 4C3HK 4A3DC 3M4OK 4QJVB 1I50K 4QIWL 1I6VA 2R93K 2B63C 2VUMC 1BDFA 2JA7C 3H3VD 4LJZA 2Y0SD 3HKZL 3RZDK 2B63K 4A3KK 2NVYK 5C3EK 1Y1VC 1TWFC 3HOUK 3FKIC 4NOIA 3S16K 4C3JC 5C3EC 4OIQA 3HOWK 3S2DK 3PO2C 4A3MK 1TWGC 4A3FK 2R7ZK 2BE5A 3K7AK 1SMYA 4GZYA 3HOWC 4YFXA 4A3JC 4MEXA 3GTMC 4A3MC 4BXXC 3GTGC 4A3FC 1TWGK 3GTJK 3PO2K 4Y52K 1WCMC 3HOXK 5FLMK 4Y7NC 5IP9C 2CW0A 3HKZD 4XSZA 4Y52C 3M3YC 3I4NC 2WAQL 2JA6K 3PO3K 4A3CK 5FLMC 4A3IC 4Q4ZA 3GTKK 3PO3C 3S15C 4YFKA 1YNNA 1SFOK 5C4JK 3S1QC 5D4DA 4C3HC 2E2JK 5TMFA 1ZYRA 1TWHC 4C2MC 1I6HC 3H0GK 4MEYA 3RZDC 4OINA 2PA8L 4A3KC 4JK1A 1TWAC 5M3FK 4QJVA 2NVXC 4BBSK 2YU9C 4C3JK 4KN7A 2E2HK 3S1RK 4AYBD 3HOZK 5IYDC 3GTQC 1TWCK 1IW7A 3GTLC 5IP7K 1R9TC 4X6AC 3S14K 3GTMK 4BXXK 5IP7C 2NVQC 3GTPK 3S1MK 2PPBA 1R9TK 4A3LK 4YFNA 4BY1K 4A3BC 4A93K 3S14C 4C3IC 3HOVC 3HOYC 4YG2A 3M3YK 4A3BK 3CQZC 4BBRK 1K83C 5M5WK 3GTKC 4LK1A 1SFOC 4LK0A 1YNJA 2WB1L 5FJ8K 2VUMK 2JA8K 1K83K 5IYCK 2NVQK 5C4XK 3S1QK 4C2MK 3S17C 3S1NK 3S16C 1Y1WC 3H0GC 2E2IC 1TWHK 1TWFK 2NVTK 1I6HK 4BBSC 3S1NC 3S17K 1XPPA 3K7AC 2NVXK 4BY7K 4A3JK 3GTOC 4OIPA 3GTJC 3GTGK 5M3MK 5M5YK 5IYBK 3S2HK 1TWCC 3DXJA 2A6HA 4BY7C 4XLPA 3GTQK 5IYDK 2R92K 5TMCA 4ZH4A 5IYBC 2WAQD 3I4MC 4A3CC 4A3GC 2JA6C 5IP9K 4Y7NK 4A3LC 3I4NK 4G7OA 4MQ9A 4BY1C 4A93C 4KN4A 3S15K 4A3IK 3M4OC 4A3DK 3H3VL 1I50C 2R93C 3FKIK 2JA7K 2A69A 4BBRC 4G7ZA 3HOYK 4Q5SA 1I3QK 4QIWD 4XSXA 3HOUC 1Y1VK 3S1MC 3EQLA 2A68A 2JA8C 2NVYC 1I3QC 4OIOA 2PMZD 5IYCC 2WB1D 2JA5C 4OIRA 1TWAK 5M5XK 2YU9K 4LLGA 2R7ZC 5C4XC 2Y0SL 3S2DC 2JA5K 2NVTC 3S1RC 4AYBL 4XLNA 1Y1WK 2E2IK 4A3EK 2E2HC 3GTLK 3HOZC 4G7HA 2O5JA 3HOXC 1WCMK 5C44K 3RZOK 4A3EC 3S2HC 3GTPC 2PA8D 3WODA 3GTOK 4KMUA 1HQMA 4X6AK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C44 C;  3RZO C;  2R92 C;  3I4M K;  4A3G K;  4C3I K;  2PMZ L;  3CQZ K;  3HOV K;  5C4J C;  2O5I A;  2A6E A;  2E2J C;  4C3H K;  4A3D C;  3M4O K;  4QJV B;  1I50 K;  4QIW L;  1I6V A;  2R93 K;  2B63 C;  2VUM C;  1BDF A;  2JA7 C;  3H3V D;  4LJZ A;  2Y0S D;  3HKZ L;  3RZD K;  2B63 K;  4A3K K;  2NVY K;  5C3E K;  1Y1V C;  1TWF C;  3HOU K;  3FKI C;  4NOI A;  3S16 K;  4C3J C;  5C3E C;  4OIQ A;  3HOW K;  3S2D K;  3PO2 C;  4A3M K;  1TWG C;  4A3F K;  2R7Z K;  2BE5 A;  3K7A K;  1SMY A;  4GZY A;  3HOW C;  4YFX A;  4A3J C;  4MEX A;  3GTM C;  4A3M C;  4BXX C;  3GTG C;  4A3F C;  1TWG K;  3GTJ K;  3PO2 K;  4Y52 K;  1WCM C;  3HOX K;  5FLM K;  4Y7N C;  5IP9 C;  2CW0 A;  3HKZ D;  4XSZ A;  4Y52 C;  3M3Y C;  3I4N C;  2WAQ L;  2JA6 K;  3PO3 K;  4A3C K;  5FLM C;  4A3I C;  4Q4Z A;  3GTK K;  3PO3 C;  3S15 C;  4YFK A;  1YNN A;  1SFO K;  5C4J K;  3S1Q C;  5D4D A;  4C3H C;  2E2J K;  5TMF A;  1ZYR A;  1TWH C;  4C2M C;  1I6H C;  3H0G K;  4MEY A;  3RZD C;  4OIN A;  2PA8 L;  4A3K C;  4JK1 A;  1TWA C;  5M3F K;  4QJV A;  2NVX C;  4BBS K;  2YU9 C;  4C3J K;  4KN7 A;  2E2H K;  3S1R K;  4AYB D;  3HOZ K;  5IYD C;  3GTQ C;  1TWC K;  1IW7 A;  3GTL C;  5IP7 K;  1R9T C;  4X6A C;  3S14 K;  3GTM K;  4BXX K;  5IP7 C;  2NVQ C;  3GTP K;  3S1M K;  2PPB A;  1R9T K;  4A3L K;  4YFN A;  4BY1 K;  4A3B C;  4A93 K;  3S14 C;  4C3I C;  3HOV C;  3HOY C;  4YG2 A;  3M3Y K;  4A3B K;  3CQZ C;  4BBR K;  1K83 C;  5M5W K;  3GTK C;  4LK1 A;  1SFO C;  4LK0 A;  1YNJ A;  2WB1 L;  5FJ8 K;  2VUM K;  2JA8 K;  1K83 K;  5IYC K;  2NVQ K;  5C4X K;  3S1Q K;  4C2M K;  3S17 C;  3S1N K;  3S16 C;  1Y1W C;  3H0G C;  2E2I C;  1TWH K;  1TWF K;  2NVT K;  1I6H K;  4BBS C;  3S1N C;  3S17 K;  1XPP A;  3K7A C;  2NVX K;  4BY7 K;  4A3J K;  3GTO C;  4OIP A;  3GTJ C;  3GTG K;  5M3M K;  5M5Y K;  5IYB K;  3S2H K;  1TWC C;  3DXJ A;  2A6H A;  4BY7 C;  4XLP A;  3GTQ K;  5IYD K;  2R92 K;  5TMC A;  4ZH4 A;  5IYB C;  2WAQ D;  3I4M C;  4A3C C;  4A3G C;  2JA6 C;  5IP9 K;  4Y7N K;  4A3L C;  3I4N K;  4G7O A;  4MQ9 A;  4BY1 C;  4A93 C;  4KN4 A;  3S15 K;  4A3I K;  3M4O C;  4A3D K;  3H3V L;  1I50 C;  2R93 C;  3FKI K;  2JA7 K;  2A69 A;  4BBR C;  4G7Z A;  3HOY K;  4Q5S A;  1I3Q K;  4QIW D;  4XSX A;  3HOU C;  1Y1V K;  3S1M C;  3EQL A;  2A68 A;  2JA8 C;  2NVY C;  1I3Q C;  4OIO A;  2PMZ D;  5IYC C;  2WB1 D;  2JA5 C;  4OIR A;  1TWA K;  5M5X K;  2YU9 K;  4LLG A;  2R7Z C;  5C4X C;  2Y0S L;  3S2D C;  2JA5 K;  2NVT C;  3S1R C;  4AYB L;  4XLN A;  1Y1W K;  2E2I K;  4A3E K;  2E2H C;  3GTL K;  3HOZ C;  4G7H A;  2O5J A;  3HOX C;  1WCM K;  5C44 K;  3RZO K;  4A3E C;  3S2H C;  3GTP C;  2PA8 D;  3WOD A;  3GTO K;  4KMU A;  1HQM A;  4X6A K; 
#chains in the Genus database with same CATH topology
 1TWC A;  4KAW X;  1XZQ A;  3I4M K;  1WQH A;  3HOV K;  2ZJP S;  2L5N A;  5DM6 S;  4C3H K;  3M4O K;  4QJV B;  3IPJ A;  4QIW L;  1I6V A;  2VUM C;  4LJZ A;  3HKZ L;  5TJ3 A;  4IOC S;  1TWF C;  1F93 A;  1I50 A;  4P5A A;  4C3J C;  3HOW K;  3GTM A;  4A3F K;  2BE5 A;  3K7A K;  1SMY A;  2CFA A;  4A3M C;  3PO2 K;  1Y1W A;  3A8I A;  3GEE A;  5IP9 C;  4Y7N C;  3I4N C;  3AH5 A;  4XSZ A;  1EH1 A;  1IQ0 A;  4Q4Z A;  3GTK K;  5HL8 A;  3AD8 C;  2FQO A;  5C4J K;  2E2J K;  1ZYR A;  3H0G A;  1TWH C;  1I6H C;  3N3Y A;  1V5V A;  4JK1 A;  1ZXO A;  2NVX C;  3LYW A;  1UV7 A;  4DDQ A;  3HOZ K;  1GE9 A;  2L3U A;  1TWC K;  2R7Z A;  3S0X A;  5IP7 C;  2EBB A;  4KAT A;  1R9T K;  4RMF A;  2CFA B;  3S14 C;  5DM7 S;  3HOV C;  3TFI A;  3HOY C;  4YG2 A;  1Y1V A;  1WSR A;  4A3B K;  1YNJ A;  2WB1 L;  3LPX A;  3SZZ A;  1ZVU A;  4P9S A;  3GTK A;  1ZQ1 C;  3G4A A;  4C2M K;  3MML B;  4BKW A;  3S17 C;  3S1N K;  4GTD A;  3H0G C;  4KM9 A;  3GSI A;  5IOQ A;  1O2B A;  3GTO C;  3GTG K;  5M5Y K;  3DXJ A;  5TMC A;  4A3G C;  3GTJ A;  4U67 S;  4LOW A;  4WCE S;  4A3D K;  4WFA S;  3H3V L;  1I50 C;  1XZP A;  2GSU A;  1DCP A;  4WIL A;  2YU9 A;  1I3Q A;  3FKI K;  2NVY C;  4OIO A;  2PMZ D;  2WB1 D;  4BLB A;  5M5X K;  4LLG A;  2R7Z C;  5C4X C;  4KDD A;  1PJ6 A;  5CJ9 A;  4G7H A;  5JVG S;  2R92 A;  3WOD A;  1J6W A;  1FEU A;  1IBA A;  4X6A K;  5C44 C;  2ZJR S;  2JH3 A;  1WQG A;  5IOR A;  3CQZ K;  3GEH A;  2A6E A;  1AB4 A;  4A3D C;  1I50 K;  3FHZ A;  3HXA A;  2Y0S D;  3Q3Q A;  4PAA A;  3FOE A;  2NVY K;  5C3E K;  1Y1V C;  3HOU K;  1SFO A;  3L4J A;  3PO2 C;  4A3M K;  1TWG C;  4YFX A;  3GTM C;  4BXX C;  1EFW A;  1DD5 A;  3GTJ K;  1DCH A;  2E2I A;  4Y52 K;  1WCM C;  2WAQ L;  4A3C K;  3GTL A;  4KAS A;  2E2H A;  4A3I C;  2XCO A;  3S15 C;  4YFK A;  1YNN A;  1PJ7 A;  1O26 A;  1VLO A;  5D4D A;  1TWA A;  2PHC B;  4C2M C;  4MEY A;  1BGW A;  4OIN A;  4A3K C;  3AD7 C;  2YU9 C;  1G51 A;  3AQP A;  2E2H K;  1EQR A;  2ZUF A;  5IYD C;  4FM9 A;  1WOR A;  4X6A C;  1YX2 A;  2NVQ C;  3GTP K;  3S1M K;  4A3L K;  4GT9 A;  4A3B C;  3TFH A;  4A93 K;  4BBR K;  1F9N A;  3GTK C;  1B4B A;  3GIR A;  4KMA A;  1L0W A;  4KM8 A;  5FJ8 K;  1IL2 A;  1C0A A;  2V6T A;  2JA8 K;  1K83 K;  3S1Q K;  2V6S A;  1Y1W C;  2E2I C;  1XZP B;  2KXY A;  5JFE A;  3K7A C;  4G0U A;  1VH2 A;  5M3M K;  4BY7 C;  2R92 K;  5IYB C;  2WAQ D;  4A3C C;  4KB4 A;  2JA6 C;  4A3L C;  3GEI A;  4A93 C;  1WOP A;  5L46 A;  4KN4 A;  1EI6 A;  2KWA A;  2P5M A;  1TWF A;  4BBR C;  2ZJQ S;  4G7Z A;  4WFN S;  1I3Q K;  3HOY K;  4XSX A;  3BUE A;  3FKI A;  2A68 A;  2JA8 C;  3BP3 A;  5IYC C;  2YU9 K;  2Y0S L;  2KPU A;  4GTF A;  4XLN A;  3A8J A;  4A3E K;  1WCM K;  5C44 K;  4ILD A;  3T00 A;  3S1M C;  3GTP C;  4M1X A;  2NVQ K;  3RZO C;  1PJ5 A;  1ISE A;  3GTG A;  5EGH A;  4A3G K;  4C3I K;  5IOS A;  2E2J C;  1KQ4 A;  2GAH C;  1HI9 A;  4P5B A;  1BDF A;  2JA7 C;  2B63 K;  1WSV A;  4A3K K;  4C45 A;  4KAR A;  2R93 A;  3FKI C;  3L4K A;  4OIQ A;  4IOA S;  3TTG A;  2R7Z K;  1WCM A;  4GZY A;  3SZY A;  3HOW C;  4MEX A;  4A3J C;  4PAB A;  4A3F C;  3PIO S;  3HKZ D;  3M3Y C;  1BS2 A;  5FLM C;  2NVY A;  1IS1 A;  3PO3 C;  2GSO A;  1JOE A;  1XXC A;  1RU0 A;  1WIH A;  2GAG C;  4C3H C;  2P8T A;  5TMF A;  3CQZ A;  3H0G K;  1XXA A;  2VUM A;  3RZD C;  2PA8 L;  3CF5 S;  4QJV A;  3ADA C;  1O27 A;  4KN7 A;  3S1R K;  3N0B A;  4BLA A;  1IW7 A;  3GTL C;  5IP7 K;  1R9T C;  3TFJ A;  1F7V A;  4IO9 S;  3GTM K;  3S14 K;  4BXX K;  3GTQ A;  2PPB A;  4YFN A;  2FQT A;  2V6U A;  4KC6 A;  3LAJ A;  1K83 C;  5M5W K;  1WOO A;  5IYC K;  5C4X K;  1TWH K;  1I6H K;  1TWF K;  2NVT K;  3GTP A;  4BBS C;  3S1N C;  4KMU A;  1F7U A;  1XPP A;  3S17 K;  3ORE A;  2NVX K;  4BY7 K;  4A3J K;  4OIP A;  3GTJ C;  1VRQ C;  2RGR A;  3S2H K;  3GTQ K;  2A6H A;  3DLL S;  4O2D A;  5IYD K;  5CHP A;  3I4M C;  5IP9 K;  4Y7N K;  3I4N K;  4G7O A;  4MQ9 A;  4BY1 C;  3OEP A;  5HL7 S;  1INN A;  2B63 A;  3S15 K;  4KMD A;  2R93 C;  2A69 A;  1O24 A;  4Q5S A;  3HOU C;  1Y1V K;  4WJ4 A;  4OIR A;  4GTL A;  2ZUE A;  1R9T A;  2JA5 K;  3S2D C;  2JA7 A;  2NVT C;  4AYB L;  2E2I K;  2O5J A;  3RZO K;  3GDZ A;  3S2H C;  3GTO K;  3GTO A;  4WJ3 M;  1EK8 A;  2D6F C;  1USO A;  2R92 C;  3BP8 C;  3AQO A;  2PMZ L;  4GTB A;  5C4J C;  2O5I A;  4WFB S;  1J6X A;  3N0C A;  2R93 K;  2B63 C;  3A8K A;  3ERE D;  3H3V D;  3RZD K;  4G0V A;  4GTA A;  1YCL A;  5EGE A;  4NOI A;  3S16 K;  2XCQ A;  5C3E C;  3S2D K;  3GTG C;  1O25 A;  1TWG K;  3OPF A;  4J3N A;  1O29 A;  3HOX K;  5FLM K;  1O28 A;  2CW0 A;  2JA6 K;  4Y52 C;  3PO3 K;  1J98 A;  1USM A;  1SFO K;  1TWH A;  1JVI A;  1DCO A;  3S1Q C;  1VGX A;  1WOS A;  1B4A A;  4LR2 A;  3PIP S;  1TWA C;  5M3F K;  4GTE A;  4BBS K;  4C3J K;  4XCH A;  1BJT A;  4AYB D;  2Y3P A;  3GTQ C;  5IOT A;  3FOF A;  2JA6 A;  4KMH A;  1J6V A;  3QX3 A;  5JVH S;  1TWG A;  1IE0 A;  2RH6 A;  4BY1 K;  2GSN A;  1X31 C;  4C3I C;  4AH6 A;  3M3Y K;  3CQZ C;  1O2A A;  3JST A;  4LK1 A;  1SFO C;  4FZB A;  4LK0 A;  1O2F B;  2XCR B;  2VUM K;  1K83 A;  1XXB A;  4LQY A;  3S16 C;  3LAP A;  4GTC A;  1ZBS A;  3T02 A;  5IYB K;  1JQW A;  1TWC C;  4XLP A;  3NUH A;  5JVO A;  4ZH4 A;  3G4C A;  2ZFZ A;  3VA7 A;  3AD9 C;  3V4G A;  4A3I K;  3M4O C;  3CAG A;  4GFQ A;  2JA7 K;  2JA5 A;  4WF9 S;  4QIW D;  4KB2 A;  4G0W A;  3EQL A;  3T01 A;  1I3Q C;  2JA5 C;  1TWA K;  1VJE A;  3S1R C;  1Y1W K;  1XZQ B;  2E2H C;  2W7V A;  3GTL K;  3HOZ C;  2KQ1 A;  5E68 A;  3HOX C;  2NVX A;  4A3E C;  2PA8 D;  1WQF A;  1HQM A;  5HQH A; 
#chains in the Genus database with same CATH homology
 5C44 C;  3RZO C;  2R92 C;  3I4M K;  4A3G K;  4C3I K;  2PMZ L;  3CQZ K;  3HOV K;  5C4J C;  2O5I A;  2A6E A;  2E2J C;  4C3H K;  4A3D C;  3M4O K;  4QJV B;  1I50 K;  4QIW L;  1I6V A;  2R93 K;  2B63 C;  2VUM C;  1BDF A;  2JA7 C;  3H3V D;  4LJZ A;  2Y0S D;  3HKZ L;  3RZD K;  2B63 K;  4A3K K;  2NVY K;  5C3E K;  1Y1V C;  1TWF C;  3HOU K;  3FKI C;  4NOI A;  3S16 K;  4C3J C;  5C3E C;  4OIQ A;  3HOW K;  3S2D K;  3PO2 C;  4A3M K;  1TWG C;  4A3F K;  2R7Z K;  2BE5 A;  3K7A K;  1SMY A;  4GZY A;  3HOW C;  4YFX A;  4A3J C;  4MEX A;  3GTM C;  4A3M C;  4BXX C;  3GTG C;  4A3F C;  1TWG K;  3GTJ K;  3PO2 K;  4Y52 K;  1WCM C;  3HOX K;  5FLM K;  4Y7N C;  5IP9 C;  2CW0 A;  3HKZ D;  4XSZ A;  4Y52 C;  3M3Y C;  3I4N C;  2WAQ L;  2JA6 K;  3PO3 K;  4A3C K;  5FLM C;  4A3I C;  4Q4Z A;  3GTK K;  3PO3 C;  3S15 C;  4YFK A;  1YNN A;  1SFO K;  5C4J K;  3S1Q C;  5D4D A;  4C3H C;  2E2J K;  5TMF A;  1ZYR A;  1TWH C;  4C2M C;  1I6H C;  3H0G K;  4MEY A;  3RZD C;  4OIN A;  2PA8 L;  4A3K C;  4JK1 A;  1TWA C;  5M3F K;  4QJV A;  2NVX C;  4BBS K;  2YU9 C;  4C3J K;  4KN7 A;  2E2H K;  3S1R K;  4AYB D;  3HOZ K;  5IYD C;  3GTQ C;  1TWC K;  1IW7 A;  3GTL C;  5IP7 K;  1R9T C;  4X6A C;  3S14 K;  3GTM K;  4BXX K;  5IP7 C;  2NVQ C;  3GTP K;  3S1M K;  2PPB A;  1R9T K;  4A3L K;  4YFN A;  4BY1 K;  4A3B C;  4A93 K;  3S14 C;  4C3I C;  3HOV C;  3HOY C;  4YG2 A;  3M3Y K;  4A3B K;  3CQZ C;  4BBR K;  1K83 C;  5M5W K;  3GTK C;  4LK1 A;  1SFO C;  4LK0 A;  1YNJ A;  2WB1 L;  5FJ8 K;  2VUM K;  2JA8 K;  1K83 K;  5IYC K;  2NVQ K;  5C4X K;  3S1Q K;  4C2M K;  3S17 C;  3S1N K;  3S16 C;  1Y1W C;  3H0G C;  2E2I C;  1TWH K;  1TWF K;  2NVT K;  1I6H K;  4BBS C;  3S1N C;  3S17 K;  1XPP A;  3K7A C;  2NVX K;  4BY7 K;  4A3J K;  3GTO C;  4OIP A;  3GTJ C;  3GTG K;  5M3M K;  5M5Y K;  5IYB K;  3S2H K;  1TWC C;  3DXJ A;  2A6H A;  4BY7 C;  4XLP A;  3GTQ K;  5IYD K;  2R92 K;  5TMC A;  4ZH4 A;  5IYB C;  2WAQ D;  3I4M C;  4A3C C;  4A3G C;  2JA6 C;  5IP9 K;  4Y7N K;  4A3L C;  3I4N K;  4G7O A;  4MQ9 A;  4BY1 C;  4A93 C;  4KN4 A;  3S15 K;  4A3I K;  3M4O C;  4A3D K;  3H3V L;  1I50 C;  2R93 C;  3FKI K;  2JA7 K;  2A69 A;  4BBR C;  4G7Z A;  3HOY K;  4Q5S A;  1I3Q K;  4QIW D;  4XSX A;  3HOU C;  1Y1V K;  3S1M C;  3EQL A;  2A68 A;  2JA8 C;  2NVY C;  1I3Q C;  4OIO A;  2PMZ D;  5IYC C;  2WB1 D;  2JA5 C;  4OIR A;  1TWA K;  5M5X K;  2YU9 K;  4LLG A;  2R7Z C;  5C4X C;  2Y0S L;  3S2D C;  2JA5 K;  2NVT C;  3S1R C;  4AYB L;  4XLN A;  1Y1W K;  2E2I K;  4A3E K;  2E2H C;  3GTL K;  3HOZ C;  4G7H A;  2O5J A;  3HOX C;  1WCM K;  5C44 K;  3RZO K;  4A3E C;  3S2H C;  3GTP C;  2PA8 D;  3WOD A;  3GTO K;  4KMU A;  1HQM A;  4X6A K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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