1Y1WC

Complete rna polymerase ii elongation complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1wC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1wC01
4A3CK 4OIRA 2B63C 4BY1C 3I4MC 1R9TC 3HOUK 3K7AK 1I6VA 2NVXK 3S14K 3GTOK 2A6EA 4XSXA 4A3LK 3GTGC 4A3DC 5IYBK 4KN4A 5M3MK 3S1RK 4QJVB 5D4DA 2E2JK 3S2HK 4MQ9A 2JA8C 2E2HC 3S1QC 4BY7K 3DXJA 1XPPA 4QIWL 3EQLA 4C3IC 2JA6C 1Y1VK 5C3EK 2R92K 3CQZK 1ZYRA 1I50K 3M3YC 4OIQA 3S1NK 2R92C 4A3MK 1Y1WC 5C3EC 3GTKC 2NVTK 4XLNA 3I4NC 2E2IC 4AYBL 1WCMK 5TMCA 2CW0A 3HOZC 4X6AK 5FJ8K 4A3FC 2E2JC 4Q5SA 3GTMC 4GZYA 2NVYK 1IW7A 4C2MC 2YU9K 4YFKA 2BE5A 3GTGK 4A93C 2VUMK 4A3JK 1I6HC 3HKZD 3HOVC 3FKIK 5M5WK 2WAQL 3GTMK 4C3JC 3K7AC 5C44C 2NVXC 3S14C 4JK1A 3RZDK 1TWCC 4A3CC 5IP9K 4QIWD 3HOZK 2PMZL 4A3EK 1WCMC 3HKZL 5M5YK 3HOXK 3GTQK 5IYDK 1YNNA 5IYCK 3GTPC 2PA8L 2NVQC 4A3BC 3GTPK 3CQZC 4BBRC 4BBSK 4KN7A 5C4JC 3H3VL 1SMYA 5IYDC 3HOXC 3GTQC 1TWFK 4Y7NK 4LJZA 4C3IK 4AYBD 1HQMA 4BY7C 5IP9C 2Y0SL 4A3KC 5M5XK 5C4XC 3RZDC 3H0GK 2JA8K 2O5IA 3GTLK 1TWAC 3S2HC 3GTJC 3HOWK 4LK0A 2R93K 3S16K 4XSZA 3FKIC 3HOVK 3S1MC 3PO3K 3PO3C 2VUMC 4A93K 3S16C 2R93C 2PMZD 4OIOA 3HOUC 1TWAK 4A3FK 4NOIA 3HOWC 4C3HC 3I4MK 4A3KK 4LLGA 2PPBA 2R7ZK 2A6HA 3S2DK 1K83K 2B63K 4QJVA 3HOYC 1YNJA 2E2IK 1TWFC 3I4NK 3PO2C 4LK1A 1Y1WK 3GTKK 4A3MC 4BBSC 2JA5C 4BBRK 2Y0SD 1I50C 3S1NC 2NVQK 1TWGK 1Y1VC 4MEYA 4MEXA 3M4OC 1TWHK 1SFOK 2JA6K 3RZOC 3H3VD 1I3QC 1TWHC 2E2HK 4BXXC 5TMFA 4OIPA 1TWCK 2WB1L 2PA8D 5C44K 4C3JK 2WAQD 3S15K 3S1RC 1I6HK 4A3GK 4A3JC 4A3LC 2A68A 5M3FK 3GTOC 2YU9C 4C2MK 3HOYK 4Y52K 2NVYC 4YFXA 2R7ZC 3S2DC 3S17C 4X6AC 1R9TK 4C3HK 4BY1K 3S17K 4Q4ZA 4YG2A 4G7ZA 4G7OA 5IP7K 4Y52C 2NVTC 3WODA 4A3IC 4ZH4A 4G7HA 4A3GC 3S1MK 2O5JA 3M3YK 3S15C 3GTJK 3GTLC 2JA7C 5FLMK 3H0GC 5C4XK 4BXXK 1I3QK 1BDFA 3RZOK 2A69A 3S1QK 1SFOC 4Y7NC 5FLMC 3M4OK 2JA7K 1TWGC 5C4JK 4A3BK 4YFNA 2JA5K 5IYBC 4A3DK 5IYCC 2WB1D 4XLPA 4A3IK 3PO2K 4OINA 4A3EC 4KMUA 1K83C 5IP7C
chains in the Genus database with same CATH superfamily
1PJ6A 3HOUK 1DD5A 3GTGC 1XZPA 5D4DA 5JVGS 5E68A 4MQ9A 4BY7K 1XPPA 4QIWL 3EQLA 5CHPA 1Y1VK 3N0BA 5C3EK 3L4KA 2R92K 3CF5S 1ZYRA 1K83A 2B63A 3I4NC 4AYBL 3HOZC 2KQ1A 3IPJA 4KMDA 3PIOS 2NVYK 4GZYA 4C2MC 1J6WA 1SFOA 2YU9K 4GTLA 3FKIK 3GTLA 2NVXC 3Q3QA 3RZDK 4A3CC 4WJ3M 3GTQK 2PA8L 4FZBA 5C4JC 1GE9A 5IYDC 4LJZA 1HQMA 5IP9C 3LPXA 2JA8K 3H0GK 2R93K 3S16K 4P5BA 4XSZA 1IBAA 3S1MC 1JOEA 3S0XA 4A93K 2KWAA 5IOTA 1O25A 4A3FK 3HOUC 3HOWC 1XZPB 3TFIA 2JA5C 4AH6A 2JH3A 1EQRA 5IOSA 3GSIA 2P5MA 1TWCK 2PA8D 3S15K 1WOPA 2FQOA 1I6HK 2L3UA 4A3JC 4GFQA 3HOYK 2L5NA 5JVOA 3GTPA 4GTEA 2P8TA 3WODA 4ZH4A 4G7HA 3S15C 4KB4A 1L0WA 2NVXA 5DM6S 5C4XK 4J3NA 3N3YA 5C4JK 4IO9S 4A3DK 4KAWX 2Y3PA 5IP7C 1ZVUA 4OIRA 1EK8A 2CFAA 3K7AK 1I6VA 3S14K 5HL7S 2A6EA 4A3LK 5IYBK 2E2HA 4QJVB 3S2HK 2ZUEA 5JVHS 3DXJA 1WQHA 1XZQA 3GEEA 1UV7A 2EBBA 1Y1WC 3GTKC 3AD7C 4KM8A 4G0WA 2PHCB 4LOWA 4X6AK 1ZQ1C 1IW7A 1VGXA 2RH6A 4A93C 3GTGK 4U67S 1USMA 3SZYA 3AH5A 4QIWD 2PMZL 3HKZL 4GTFA 2GSUA 3A8KA 1YNNA 3GTPC 3GTPK 3CQZC 4BBRC 3H3VL 1SMYA 3GTQC 3RZDC 3HOWK 2O5IA 1IL2A 1TWAC 3S2HC 3GTJC 4WF9S 4LK0A 1G51A 3HOVK 1TWHA 5EGHA 2ZJRS 3TTGA 2R93C 1TWAK 4KATA 3TFJA 4IOAS 1O26A 2R7ZK 1O28A 2A6HA 1RU0A 1TWFA 3AQOA 1TWGK 1XZQB 1DCOA 1Y1VC 4MEYA 4MEXA 3M4OC 2GAHC 1ZXOA 3RZOC 1I3QC 1F9NA 2E2HK 4BXXC 4OIPA 2WB1L 4C3JK 4A3LC 3NUHA 3T01A 4FM9A 4Y52K 2NVYC 4IOCS 4BLBA 4X6AC 4Q4ZA 4YG2A 4G7ZA 3PIPS 2GSOA 2NVTC 1O2AA 2O5JA 3GTJK 3BP3A 3GTLC 1KQ4A 1BDFA 1O29A 1WORA 3RZOK 1SFOC 4Y7NC 5FLMC 4GTDA 2FQTA 5CJ9A 1WSRA 4YFNA 4P5AA 3BP8C 4G0UA 1JVIA 5IYCC 2WB1D 4WFBS 4WCES 1VRQC 2E2IA 4A3EC 1F7UA 2B63C 1ZBSA 1K83C 2R92A 5EGEA 4A3CK 1O27A 3GEHA 1R9TC 4WILA 4XSXA 1DCPA 4KN4A 3GEIA 5M3MK 1X31C 2W7VA 1O24A 2JA8C 3S1QC 1EI6A 4C3IC 3N0CA 2JA6C 1BS2A 3CQZK 1R9TA 3M3YC 2ZUFA 4A3MK 5C3EC 2NVTK 1WQFA 2E2IC 3AQPA 1WCMK 3AD9C 3A8JA 2E2JC 1TWGA 3GTMC 4BKWA 2BE5A 1XXAA 1WIHA 3T00A 3HKZD 3H0GA 5DM7S 5M5WK 4C3JC 3K7AC 3S14C 1WQGA 4JK1A 1TWCC 1O2FB 5IP9K 3HOZK 4A3EK 1WCMC 1WSVA 5M5YK 3HOXK 1BJTA 4PAAA 2NVQC 4A3BC 3MMLB 4BBSK 2NVYA 3AD8C 2YU9A 4C3IK 3GTOA 4LR2A 1IE0A 4BY7C 2Y0SL 5C4XC 5HQHA 3GTLK 2GAGC 3FKIC 3PO3K 3PO3C 2VUMC 3L4JA 2CFAB 3S16C 1PJ5A 5TJ3A 3VA7A 2PMZD 4OIOA 2RGRA 1I50A 4A3KK 4LLGA 3S2DK 3HOYC 1XXBA 1YNJA 2E2IK 1TWFC 3PO2C 4BBRK 3G4AA 2NVQK 1I50C 3S1NC 2R93A 1YCLA 2VUMA 1TWHC 4P9SA 4WFNS 2ZJQS 2WAQD 3S1RC 1EH1A 3HXAA 2A68A 3GTOC 4KC6A 2KPUA 2YU9C 4C2MK 1F7VA 3GDZA 2R7ZC 3CQZA 1R9TK 1XXCA 4BY1K 1IS1A 4G7OA 5IP7K 3FHZA 4Y52C 3FOFA 3DLLS 4ILDA 1WCMA 4A3IC 1DCHA 4A3GC 3S1MK 1J6XA 1TWCA 3M3YK 4PABA 3TFHA 2JA7C 3H0GC 5HL8A 1INNA 1I3QK 1ISEA 2KXYA 2A69A 1B4AA 1J98A 3SZZA 1TWGC 3FOEA 1VJEA 4A3BK 1C0AA 2JA5K 5IYBC 4GTCA 3PO2K 1WOOA 4KMUA 3GTKA 1Y1WA 2WAQL 2XCRB 4BY1C 3I4MC 2NVXK 4M1XA 4GTBA 2JA6A 4C45A 3GTOK 3OREA 1BGWA 4A3DC 3JSTA 3A8IA 3S1RK 2E2JK 3CAGA 2XCOA 2E2HC 3GTGA 4KARA 4KMHA 1I50K 3V4GA 3S1NK 4OIQA 2R92C 4XLNA 5TMCA 2V6TA 2CW0A 3LYWA 5FJ8K 1B4BA 4A3FC 4Q5SA 4YFKA 3BUEA 2VUMK 4A3JK 1I6HC 3HOVC 3QX3A 3OPFA 3GTMK 2JA7A 5C44C 4WJ4A 2V6UA 5IYDK 4BLAA 3T02A 5IYCK 1PJ7A 1EFWA 2R7ZA 4KN7A 3HOXC 4Y7NK 1TWFK 5IORA 4DDQA 4AYBD 1AB4A 2ZJPS 5M5XK 4A3KC 1JQWA 4KASA 1I3QA 4WFAS 1Y1VA 4XCHA 4O2DA 1F93A 4NOIA 3I4MK 4C3HC 2JA5A 2PPBA 1YX2A 1K83K 2ZFZA 2B63K 4QJVA 5L46A 3I4NK 4LK1A 3OEPA 3LAPA 4A3MC 1Y1WK 4BBSC 3G4CA 5JFEA 3GTKK 2Y0SD 1O2BA 2JA6K 1FEUA 1SFOK 1TWHK 4LQYA 3H3VD 1J6VA 3FKIA 5TMFA 2V6SA 4GTAA 5C44K 3GTJA 1TWAA 1IQ0A 4A3GK 5M3FK 3GTQA 4YFXA 3S2DC 3S17C 4C3HK 3S17K 4KB2A 4KDDA 4G0VA 4GT9A 1USOA 1HI9A 4RMFA 4KMAA 1VLOA 5FLMK 1WOSA 2GSNA 4KM9A 4BXXK 1VH2A 2XCQA 3S1QK 3M4OK 2JA7K 3GTMA 3ERED 3GIRA 2D6FC 4XLPA 4A3IK 4OINA 1V5VA 5IOQA 3LAJA 3ADAC
chains in the Genus database with same CATH topology
4A3CK 4OIRA 2B63C 4BY1C 3I4MC 1R9TC 3HOUK 3K7AK 1I6VA 2NVXK 3S14K 3GTOK 2A6EA 4XSXA 4A3LK 3GTGC 4A3DC 5IYBK 4KN4A 5M3MK 3S1RK 4QJVB 5D4DA 2E2JK 3S2HK 4MQ9A 2JA8C 2E2HC 3S1QC 4BY7K 3DXJA 1XPPA 4QIWL 3EQLA 4C3IC 2JA6C 1Y1VK 5C3EK 2R92K 3CQZK 1ZYRA 1I50K 3M3YC 4OIQA 3S1NK 2R92C 4A3MK 1Y1WC 5C3EC 3GTKC 2NVTK 4XLNA 3I4NC 2E2IC 4AYBL 1WCMK 5TMCA 2CW0A 3HOZC 4X6AK 5FJ8K 4A3FC 2E2JC 4Q5SA 3GTMC 4GZYA 2NVYK 1IW7A 4C2MC 2YU9K 4YFKA 2BE5A 3GTGK 4A93C 2VUMK 4A3JK 1I6HC 3HKZD 3HOVC 3FKIK 5M5WK 2WAQL 3GTMK 4C3JC 3K7AC 5C44C 2NVXC 3S14C 4JK1A 3RZDK 1TWCC 4A3CC 5IP9K 4QIWD 3HOZK 2PMZL 4A3EK 1WCMC 3HKZL 5M5YK 3HOXK 3GTQK 5IYDK 1YNNA 5IYCK 3GTPC 2PA8L 2NVQC 4A3BC 3GTPK 3CQZC 4BBRC 4BBSK 4KN7A 5C4JC 3H3VL 1SMYA 5IYDC 3HOXC 3GTQC 1TWFK 4Y7NK 4LJZA 4C3IK 4AYBD 1HQMA 4BY7C 5IP9C 2Y0SL 4A3KC 5M5XK 5C4XC 3RZDC 3H0GK 2JA8K 2O5IA 3GTLK 1TWAC 3S2HC 3GTJC 3HOWK 4LK0A 2R93K 3S16K 4XSZA 3FKIC 3HOVK 3S1MC 3PO3K 3PO3C 2VUMC 4A93K 3S16C 2R93C 2PMZD 4OIOA 3HOUC 1TWAK 4A3FK 4NOIA 3HOWC 4C3HC 3I4MK 4A3KK 4LLGA 2PPBA 2R7ZK 2A6HA 3S2DK 1K83K 2B63K 4QJVA 3HOYC 1YNJA 2E2IK 1TWFC 3I4NK 3PO2C 4LK1A 1Y1WK 3GTKK 4A3MC 4BBSC 2JA5C 4BBRK 2Y0SD 1I50C 3S1NC 2NVQK 1TWGK 1Y1VC 4MEYA 4MEXA 3M4OC 1TWHK 1SFOK 2JA6K 3RZOC 3H3VD 1I3QC 1TWHC 2E2HK 4BXXC 5TMFA 4OIPA 1TWCK 2WB1L 2PA8D 5C44K 4C3JK 2WAQD 3S15K 3S1RC 1I6HK 4A3GK 4A3JC 4A3LC 2A68A 5M3FK 3GTOC 2YU9C 4C2MK 3HOYK 4Y52K 2NVYC 4YFXA 2R7ZC 3S2DC 3S17C 4X6AC 1R9TK 4C3HK 4BY1K 3S17K 4Q4ZA 4YG2A 4G7ZA 4G7OA 5IP7K 4Y52C 2NVTC 3WODA 4A3IC 4ZH4A 4G7HA 4A3GC 3S1MK 2O5JA 3M3YK 3S15C 3GTJK 3GTLC 2JA7C 5FLMK 3H0GC 5C4XK 4BXXK 1I3QK 1BDFA 3RZOK 2A69A 3S1QK 1SFOC 4Y7NC 5FLMC 3M4OK 2JA7K 1TWGC 5C4JK 4A3BK 4YFNA 2JA5K 5IYBC 4A3DK 5IYCC 2WB1D 4XLPA 4A3IK 3PO2K 4OINA 4A3EC 4KMUA 1K83C 5IP7C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3C K;  4OIR A;  2B63 C;  4BY1 C;  3I4M C;  1R9T C;  3HOU K;  3K7A K;  1I6V A;  2NVX K;  3S14 K;  3GTO K;  2A6E A;  4XSX A;  4A3L K;  3GTG C;  4A3D C;  5IYB K;  4KN4 A;  5M3M K;  3S1R K;  4QJV B;  5D4D A;  2E2J K;  3S2H K;  4MQ9 A;  2JA8 C;  2E2H C;  3S1Q C;  4BY7 K;  3DXJ A;  1XPP A;  4QIW L;  3EQL A;  4C3I C;  2JA6 C;  1Y1V K;  5C3E K;  2R92 K;  3CQZ K;  1ZYR A;  1I50 K;  3M3Y C;  4OIQ A;  3S1N K;  2R92 C;  4A3M K;  1Y1W C;  5C3E C;  3GTK C;  2NVT K;  4XLN A;  3I4N C;  2E2I C;  4AYB L;  1WCM K;  5TMC A;  2CW0 A;  3HOZ C;  4X6A K;  5FJ8 K;  4A3F C;  2E2J C;  4Q5S A;  3GTM C;  4GZY A;  2NVY K;  1IW7 A;  4C2M C;  2YU9 K;  4YFK A;  2BE5 A;  3GTG K;  4A93 C;  2VUM K;  4A3J K;  1I6H C;  3HKZ D;  3HOV C;  3FKI K;  5M5W K;  2WAQ L;  3GTM K;  4C3J C;  3K7A C;  5C44 C;  2NVX C;  3S14 C;  4JK1 A;  3RZD K;  1TWC C;  4A3C C;  5IP9 K;  4QIW D;  3HOZ K;  2PMZ L;  4A3E K;  1WCM C;  3HKZ L;  5M5Y K;  3HOX K;  3GTQ K;  5IYD K;  1YNN A;  5IYC K;  3GTP C;  2PA8 L;  2NVQ C;  4A3B C;  3GTP K;  3CQZ C;  4BBR C;  4BBS K;  4KN7 A;  5C4J C;  3H3V L;  1SMY A;  5IYD C;  3HOX C;  3GTQ C;  1TWF K;  4Y7N K;  4LJZ A;  4C3I K;  4AYB D;  1HQM A;  4BY7 C;  5IP9 C;  2Y0S L;  4A3K C;  5M5X K;  5C4X C;  3RZD C;  3H0G K;  2JA8 K;  2O5I A;  3GTL K;  1TWA C;  3S2H C;  3GTJ C;  3HOW K;  4LK0 A;  2R93 K;  3S16 K;  4XSZ A;  3FKI C;  3HOV K;  3S1M C;  3PO3 K;  3PO3 C;  2VUM C;  4A93 K;  3S16 C;  2R93 C;  2PMZ D;  4OIO A;  3HOU C;  1TWA K;  4A3F K;  4NOI A;  3HOW C;  4C3H C;  3I4M K;  4A3K K;  4LLG A;  2PPB A;  2R7Z K;  2A6H A;  3S2D K;  1K83 K;  2B63 K;  4QJV A;  3HOY C;  1YNJ A;  2E2I K;  1TWF C;  3I4N K;  3PO2 C;  4LK1 A;  1Y1W K;  3GTK K;  4A3M C;  4BBS C;  2JA5 C;  4BBR K;  2Y0S D;  1I50 C;  3S1N C;  2NVQ K;  1TWG K;  1Y1V C;  4MEY A;  4MEX A;  3M4O C;  1TWH K;  1SFO K;  2JA6 K;  3RZO C;  3H3V D;  1I3Q C;  1TWH C;  2E2H K;  4BXX C;  5TMF A;  4OIP A;  1TWC K;  2WB1 L;  2PA8 D;  5C44 K;  4C3J K;  2WAQ D;  3S15 K;  3S1R C;  1I6H K;  4A3G K;  4A3J C;  4A3L C;  2A68 A;  5M3F K;  3GTO C;  2YU9 C;  4C2M K;  3HOY K;  4Y52 K;  2NVY C;  4YFX A;  2R7Z C;  3S2D C;  3S17 C;  4X6A C;  1R9T K;  4C3H K;  4BY1 K;  3S17 K;  4Q4Z A;  4YG2 A;  4G7Z A;  4G7O A;  5IP7 K;  4Y52 C;  2NVT C;  3WOD A;  4A3I C;  4ZH4 A;  4G7H A;  4A3G C;  3S1M K;  2O5J A;  3M3Y K;  3S15 C;  3GTJ K;  3GTL C;  2JA7 C;  5FLM K;  3H0G C;  5C4X K;  4BXX K;  1I3Q K;  1BDF A;  3RZO K;  2A69 A;  3S1Q K;  1SFO C;  4Y7N C;  5FLM C;  3M4O K;  2JA7 K;  1TWG C;  5C4J K;  4A3B K;  4YFN A;  2JA5 K;  5IYB C;  4A3D K;  5IYC C;  2WB1 D;  4XLP A;  4A3I K;  3PO2 K;  4OIN A;  4A3E C;  4KMU A;  1K83 C;  5IP7 C; 
#chains in the Genus database with same CATH topology
 1PJ6 A;  3HOU K;  1DD5 A;  3GTG C;  1XZP A;  5D4D A;  5JVG S;  5E68 A;  4MQ9 A;  4BY7 K;  1XPP A;  4QIW L;  3EQL A;  5CHP A;  1Y1V K;  3N0B A;  5C3E K;  3L4K A;  2R92 K;  3CF5 S;  1ZYR A;  1K83 A;  2B63 A;  3I4N C;  4AYB L;  3HOZ C;  2KQ1 A;  3IPJ A;  4KMD A;  3PIO S;  2NVY K;  4GZY A;  4C2M C;  1J6W A;  1SFO A;  2YU9 K;  4GTL A;  3FKI K;  3GTL A;  2NVX C;  3Q3Q A;  3RZD K;  4A3C C;  4WJ3 M;  3GTQ K;  2PA8 L;  4FZB A;  5C4J C;  1GE9 A;  5IYD C;  4LJZ A;  1HQM A;  5IP9 C;  3LPX A;  2JA8 K;  3H0G K;  2R93 K;  3S16 K;  4P5B A;  4XSZ A;  1IBA A;  3S1M C;  1JOE A;  3S0X A;  4A93 K;  2KWA A;  5IOT A;  1O25 A;  4A3F K;  3HOU C;  3HOW C;  1XZP B;  3TFI A;  2JA5 C;  4AH6 A;  2JH3 A;  1EQR A;  5IOS A;  3GSI A;  2P5M A;  1TWC K;  2PA8 D;  3S15 K;  1WOP A;  2FQO A;  1I6H K;  2L3U A;  4A3J C;  4GFQ A;  3HOY K;  2L5N A;  5JVO A;  3GTP A;  4GTE A;  2P8T A;  3WOD A;  4ZH4 A;  4G7H A;  3S15 C;  4KB4 A;  1L0W A;  2NVX A;  5DM6 S;  5C4X K;  4J3N A;  3N3Y A;  5C4J K;  4IO9 S;  4A3D K;  4KAW X;  2Y3P A;  5IP7 C;  1ZVU A;  4OIR A;  1EK8 A;  2CFA A;  3K7A K;  1I6V A;  3S14 K;  5HL7 S;  2A6E A;  4A3L K;  5IYB K;  2E2H A;  4QJV B;  3S2H K;  2ZUE A;  5JVH S;  3DXJ A;  1WQH A;  1XZQ A;  3GEE A;  1UV7 A;  2EBB A;  1Y1W C;  3GTK C;  3AD7 C;  4KM8 A;  4G0W A;  2PHC B;  4LOW A;  4X6A K;  1ZQ1 C;  1IW7 A;  1VGX A;  2RH6 A;  4A93 C;  3GTG K;  4U67 S;  1USM A;  3SZY A;  3AH5 A;  4QIW D;  2PMZ L;  3HKZ L;  4GTF A;  2GSU A;  3A8K A;  1YNN A;  3GTP C;  3GTP K;  3CQZ C;  4BBR C;  3H3V L;  1SMY A;  3GTQ C;  3RZD C;  3HOW K;  2O5I A;  1IL2 A;  1TWA C;  3S2H C;  3GTJ C;  4WF9 S;  4LK0 A;  1G51 A;  3HOV K;  1TWH A;  5EGH A;  2ZJR S;  3TTG A;  2R93 C;  1TWA K;  4KAT A;  3TFJ A;  4IOA S;  1O26 A;  2R7Z K;  1O28 A;  2A6H A;  1RU0 A;  1TWF A;  3AQO A;  1TWG K;  1XZQ B;  1DCO A;  1Y1V C;  4MEY A;  4MEX A;  3M4O C;  2GAH C;  1ZXO A;  3RZO C;  1I3Q C;  1F9N A;  2E2H K;  4BXX C;  4OIP A;  2WB1 L;  4C3J K;  4A3L C;  3NUH A;  3T01 A;  4FM9 A;  4Y52 K;  2NVY C;  4IOC S;  4BLB A;  4X6A C;  4Q4Z A;  4YG2 A;  4G7Z A;  3PIP S;  2GSO A;  2NVT C;  1O2A A;  2O5J A;  3GTJ K;  3BP3 A;  3GTL C;  1KQ4 A;  1BDF A;  1O29 A;  1WOR A;  3RZO K;  1SFO C;  4Y7N C;  5FLM C;  4GTD A;  2FQT A;  5CJ9 A;  1WSR A;  4YFN A;  4P5A A;  3BP8 C;  4G0U A;  1JVI A;  5IYC C;  2WB1 D;  4WFB S;  4WCE S;  1VRQ C;  2E2I A;  4A3E C;  1F7U A;  2B63 C;  1ZBS A;  1K83 C;  2R92 A;  5EGE A;  4A3C K;  1O27 A;  3GEH A;  1R9T C;  4WIL A;  4XSX A;  1DCP A;  4KN4 A;  3GEI A;  5M3M K;  1X31 C;  2W7V A;  1O24 A;  2JA8 C;  3S1Q C;  1EI6 A;  4C3I C;  3N0C A;  2JA6 C;  1BS2 A;  3CQZ K;  1R9T A;  3M3Y C;  2ZUF A;  4A3M K;  5C3E C;  2NVT K;  1WQF A;  2E2I C;  3AQP A;  1WCM K;  3AD9 C;  3A8J A;  2E2J C;  1TWG A;  3GTM C;  4BKW A;  2BE5 A;  1XXA A;  1WIH A;  3T00 A;  3HKZ D;  3H0G A;  5DM7 S;  5M5W K;  4C3J C;  3K7A C;  3S14 C;  1WQG A;  4JK1 A;  1TWC C;  1O2F B;  5IP9 K;  3HOZ K;  4A3E K;  1WCM C;  1WSV A;  5M5Y K;  3HOX K;  1BJT A;  4PAA A;  2NVQ C;  4A3B C;  3MML B;  4BBS K;  2NVY A;  3AD8 C;  2YU9 A;  4C3I K;  3GTO A;  4LR2 A;  1IE0 A;  4BY7 C;  2Y0S L;  5C4X C;  5HQH A;  3GTL K;  2GAG C;  3FKI C;  3PO3 K;  3PO3 C;  2VUM C;  3L4J A;  2CFA B;  3S16 C;  1PJ5 A;  5TJ3 A;  3VA7 A;  2PMZ D;  4OIO A;  2RGR A;  1I50 A;  4A3K K;  4LLG A;  3S2D K;  3HOY C;  1XXB A;  1YNJ A;  2E2I K;  1TWF C;  3PO2 C;  4BBR K;  3G4A A;  2NVQ K;  1I50 C;  3S1N C;  2R93 A;  1YCL A;  2VUM A;  1TWH C;  4P9S A;  4WFN S;  2ZJQ S;  2WAQ D;  3S1R C;  1EH1 A;  3HXA A;  2A68 A;  3GTO C;  4KC6 A;  2KPU A;  2YU9 C;  4C2M K;  1F7V A;  3GDZ A;  2R7Z C;  3CQZ A;  1R9T K;  1XXC A;  4BY1 K;  1IS1 A;  4G7O A;  5IP7 K;  3FHZ A;  4Y52 C;  3FOF A;  3DLL S;  4ILD A;  1WCM A;  4A3I C;  1DCH A;  4A3G C;  3S1M K;  1J6X A;  1TWC A;  3M3Y K;  4PAB A;  3TFH A;  2JA7 C;  3H0G C;  5HL8 A;  1INN A;  1I3Q K;  1ISE A;  2KXY A;  2A69 A;  1B4A A;  1J98 A;  3SZZ A;  1TWG C;  3FOE A;  1VJE A;  4A3B K;  1C0A A;  2JA5 K;  5IYB C;  4GTC A;  3PO2 K;  1WOO A;  4KMU A;  3GTK A;  1Y1W A;  2WAQ L;  2XCR B;  4BY1 C;  3I4M C;  2NVX K;  4M1X A;  4GTB A;  2JA6 A;  4C45 A;  3GTO K;  3ORE A;  1BGW A;  4A3D C;  3JST A;  3A8I A;  3S1R K;  2E2J K;  3CAG A;  2XCO A;  2E2H C;  3GTG A;  4KAR A;  4KMH A;  1I50 K;  3V4G A;  3S1N K;  4OIQ A;  2R92 C;  4XLN A;  5TMC A;  2V6T A;  2CW0 A;  3LYW A;  5FJ8 K;  1B4B A;  4A3F C;  4Q5S A;  4YFK A;  3BUE A;  2VUM K;  4A3J K;  1I6H C;  3HOV C;  3QX3 A;  3OPF A;  3GTM K;  2JA7 A;  5C44 C;  4WJ4 A;  2V6U A;  5IYD K;  4BLA A;  3T02 A;  5IYC K;  1PJ7 A;  1EFW A;  2R7Z A;  4KN7 A;  3HOX C;  4Y7N K;  1TWF K;  5IOR A;  4DDQ A;  4AYB D;  1AB4 A;  2ZJP S;  5M5X K;  4A3K C;  1JQW A;  4KAS A;  1I3Q A;  4WFA S;  1Y1V A;  4XCH A;  4O2D A;  1F93 A;  4NOI A;  3I4M K;  4C3H C;  2JA5 A;  2PPB A;  1YX2 A;  1K83 K;  2ZFZ A;  2B63 K;  4QJV A;  5L46 A;  3I4N K;  4LK1 A;  3OEP A;  3LAP A;  4A3M C;  1Y1W K;  4BBS C;  3G4C A;  5JFE A;  3GTK K;  2Y0S D;  1O2B A;  2JA6 K;  1FEU A;  1SFO K;  1TWH K;  4LQY A;  3H3V D;  1J6V A;  3FKI A;  5TMF A;  2V6S A;  4GTA A;  5C44 K;  3GTJ A;  1TWA A;  1IQ0 A;  4A3G K;  5M3F K;  3GTQ A;  4YFX A;  3S2D C;  3S17 C;  4C3H K;  3S17 K;  4KB2 A;  4KDD A;  4G0V A;  4GT9 A;  1USO A;  1HI9 A;  4RMF A;  4KMA A;  1VLO A;  5FLM K;  1WOS A;  2GSN A;  4KM9 A;  4BXX K;  1VH2 A;  2XCQ A;  3S1Q K;  3M4O K;  2JA7 K;  3GTM A;  3ERE D;  3GIR A;  2D6F C;  4XLP A;  4A3I K;  4OIN A;  1V5V A;  5IOQ A;  3LAJ A;  3ADA C; 
#chains in the Genus database with same CATH homology
 4A3C K;  4OIR A;  2B63 C;  4BY1 C;  3I4M C;  1R9T C;  3HOU K;  3K7A K;  1I6V A;  2NVX K;  3S14 K;  3GTO K;  2A6E A;  4XSX A;  4A3L K;  3GTG C;  4A3D C;  5IYB K;  4KN4 A;  5M3M K;  3S1R K;  4QJV B;  5D4D A;  2E2J K;  3S2H K;  4MQ9 A;  2JA8 C;  2E2H C;  3S1Q C;  4BY7 K;  3DXJ A;  1XPP A;  4QIW L;  3EQL A;  4C3I C;  2JA6 C;  1Y1V K;  5C3E K;  2R92 K;  3CQZ K;  1ZYR A;  1I50 K;  3M3Y C;  4OIQ A;  3S1N K;  2R92 C;  4A3M K;  1Y1W C;  5C3E C;  3GTK C;  2NVT K;  4XLN A;  3I4N C;  2E2I C;  4AYB L;  1WCM K;  5TMC A;  2CW0 A;  3HOZ C;  4X6A K;  5FJ8 K;  4A3F C;  2E2J C;  4Q5S A;  3GTM C;  4GZY A;  2NVY K;  1IW7 A;  4C2M C;  2YU9 K;  4YFK A;  2BE5 A;  3GTG K;  4A93 C;  2VUM K;  4A3J K;  1I6H C;  3HKZ D;  3HOV C;  3FKI K;  5M5W K;  2WAQ L;  3GTM K;  4C3J C;  3K7A C;  5C44 C;  2NVX C;  3S14 C;  4JK1 A;  3RZD K;  1TWC C;  4A3C C;  5IP9 K;  4QIW D;  3HOZ K;  2PMZ L;  4A3E K;  1WCM C;  3HKZ L;  5M5Y K;  3HOX K;  3GTQ K;  5IYD K;  1YNN A;  5IYC K;  3GTP C;  2PA8 L;  2NVQ C;  4A3B C;  3GTP K;  3CQZ C;  4BBR C;  4BBS K;  4KN7 A;  5C4J C;  3H3V L;  1SMY A;  5IYD C;  3HOX C;  3GTQ C;  1TWF K;  4Y7N K;  4LJZ A;  4C3I K;  4AYB D;  1HQM A;  4BY7 C;  5IP9 C;  2Y0S L;  4A3K C;  5M5X K;  5C4X C;  3RZD C;  3H0G K;  2JA8 K;  2O5I A;  3GTL K;  1TWA C;  3S2H C;  3GTJ C;  3HOW K;  4LK0 A;  2R93 K;  3S16 K;  4XSZ A;  3FKI C;  3HOV K;  3S1M C;  3PO3 K;  3PO3 C;  2VUM C;  4A93 K;  3S16 C;  2R93 C;  2PMZ D;  4OIO A;  3HOU C;  1TWA K;  4A3F K;  4NOI A;  3HOW C;  4C3H C;  3I4M K;  4A3K K;  4LLG A;  2PPB A;  2R7Z K;  2A6H A;  3S2D K;  1K83 K;  2B63 K;  4QJV A;  3HOY C;  1YNJ A;  2E2I K;  1TWF C;  3I4N K;  3PO2 C;  4LK1 A;  1Y1W K;  3GTK K;  4A3M C;  4BBS C;  2JA5 C;  4BBR K;  2Y0S D;  1I50 C;  3S1N C;  2NVQ K;  1TWG K;  1Y1V C;  4MEY A;  4MEX A;  3M4O C;  1TWH K;  1SFO K;  2JA6 K;  3RZO C;  3H3V D;  1I3Q C;  1TWH C;  2E2H K;  4BXX C;  5TMF A;  4OIP A;  1TWC K;  2WB1 L;  2PA8 D;  5C44 K;  4C3J K;  2WAQ D;  3S15 K;  3S1R C;  1I6H K;  4A3G K;  4A3J C;  4A3L C;  2A68 A;  5M3F K;  3GTO C;  2YU9 C;  4C2M K;  3HOY K;  4Y52 K;  2NVY C;  4YFX A;  2R7Z C;  3S2D C;  3S17 C;  4X6A C;  1R9T K;  4C3H K;  4BY1 K;  3S17 K;  4Q4Z A;  4YG2 A;  4G7Z A;  4G7O A;  5IP7 K;  4Y52 C;  2NVT C;  3WOD A;  4A3I C;  4ZH4 A;  4G7H A;  4A3G C;  3S1M K;  2O5J A;  3M3Y K;  3S15 C;  3GTJ K;  3GTL C;  2JA7 C;  5FLM K;  3H0G C;  5C4X K;  4BXX K;  1I3Q K;  1BDF A;  3RZO K;  2A69 A;  3S1Q K;  1SFO C;  4Y7N C;  5FLM C;  3M4O K;  2JA7 K;  1TWG C;  5C4J K;  4A3B K;  4YFN A;  2JA5 K;  5IYB C;  4A3D K;  5IYC C;  2WB1 D;  4XLP A;  4A3I K;  3PO2 K;  4OIN A;  4A3E C;  4KMU A;  1K83 C;  5IP7 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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