1Y1WC

Complete rna polymerase ii elongation complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1wC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1wC01
2A69A 1I6HC 4A3FK 2A68A 4MEXA 3RZDK 5C4JK 3S17K 4JK1A 3EQLA 3HKZD 3RZDC 4QJVB 5IP9K 4AYBL 3S17C 2CW0A 5M3FK 2R92C 5IP9C 1YNNA 1WCMK 5FLMK 2R92K 4BY7K 1I6HK 1WCMC 3H0GC 4C2MC 4NOIA 4BY7C 2VUMK 3H3VL 4KN7A 2VUMC 4G7OA 4YFKA 4OIPA 5IP7K 1BDFA 4A3MK 4MEYA 1I3QK 2A6HA 1K83K 3FKIK 3GTPK 4A3GK 3FKIC 3S2DC 3PO3C 4C3JK 2WAQD 5M5XK 4A3GC 4A3IK 2NVYK 3GTGK 3PO2C 3S15K 1SFOK 4BBRK 3S2HK 2JA6C 2NVYC 4A3CC 3HKZL 3S15C 1SFOC 1IW7A 3GTJC 3S2HC 4C3HK 4A3KC 3S1NK 4A3BK 4A3BC 3S1NC 3I4NK 2NVQK 3RZOK 5C4XK 4C3IK 3RZOC 4A3DK 4XSXA 4A3FC 1I50K 2Y0SD 4C3IC 2PPBA 5C4JC 3S1MK 4A3DC 3M3YK 3GTLK 4OIQA 4BXXK 3S1MC 2E2JK 3M3YC 3GTLC 4BXXC 4A3JK 5FLMC 3K7AK 3S16K 4A3JC 3K7AC 4QIWD 5D4DA 3S16C 2WAQL 3GTQK 4Q5SA 4YFNA 5IP7C 4A3MC 4KN4A 1TWHK 1I3QC 1TWFK 4LLGA 1K83C 4Q4ZA 5M5YK 3HOZK 1TWFC 3GTPC 3HOUK 3HOZC 1YNJA 5IYCK 4C3JC 3I4MK 1TWAK 3HOUC 4MQ9A 5IYCC 3I4MC 4A3IC 3GTGC 3S1QK 1TWAC 3M4OK 4BBRC 2B63K 2PMZD 3S1QC 2PA8D 4QJVA 4C3HC 3M4OC 2B63C 1R9TK 4OIRA 4G7HA 3S1RK 3I4NC 2A6EA 2NVQC 5C4XC 3S1RC 3GTMK 5C44K 3WODA 2E2IK 4LK0A 1I50C 2WB1D 5M5WK 4QIWL 2JA5K 2NVXK 5C44C 2E2IC 2NVXC 4ZH4A 2R7ZK 2E2JC 3HOXK 1Y1WK 3H3VD 4G7ZA 1Y1WC 5IYBK 3GTOK 4BBSK 4OINA 1I6VA 4YFXA 5IYBC 3GTOC 4BBSC 4XLPA 4YG2A 3GTQC 2NVTK 4A93K 4LK1A 1ZYRA 2NVTC 2JA8K 2PMZL 3HOYK 1TWHC 2PA8L 4LJZA 4Y7NK 5M3MK 3HOYC 4Y7NC 1Y1VK 4XSZA 2O5IA 2Y0SL 1Y1VC 2WB1L 4BY1K 5TMCA 3GTKK 4A3EK 3H0GK 1SMYA 1R9TC 1TWGK 4BY1C 4C2MK 3GTKC 4Y52K 4A3EC 1XPPA 5TMFA 4Y52C 1TWGC 1TWCK 3DXJA 4AYBD 1TWCC 2R93K 4X6AC 3GTMC 3S14K 5IYDK 2JA5C 2R93C 5IYDC 3CQZK 1HQMA 3S14C 2R7ZC 3CQZC 4X6AK 2YU9K 2O5JA 4A3LK 2JA7C 3PO3K 3S2DK 5FJ8K 3HOXC 4OIOA 2YU9C 4A3LC 3HOWK 4KMUA 3HOVK 3HOWC 3PO2K 2BE5A 2JA6K 3HOVC 4A3CK 4GZYA 5C3EK 3GTJK 4A3KK 2E2HK 5C3EC 4A93C 2JA7K 4XLNA 2E2HC 2JA8C
chains in the Genus database with same CATH superfamily
1XXAA 2A68A 4MEXA 3S17K 4JK1A 3RZDC 4WILA 5IP9K 3AQPA 1YNNA 2ZJRS 4KASA 1WCMK 3NUHA 1Y1WA 4G0VA 1O29A 4KN7A 2GSUA 1O2BA 2Y3PA 1I3QK 2A6HA 1K83K 4A3GK 1DCPA 1XZQB 1TWAA 4GTCA 3T02A 4C3JK 2XCRB 2WAQD 4GTAA 4A3IK 2NVYK 3GTGK 3PO2C 3S15K 3S2HK 4BBRK 5IOQA 5C4XK 2GAGC 2E2IA 5JVGS 2JA5A 4A3DK 1IQ0A 3M3YK 3LAJA 1IE0A 3N0CA 2L5NA 4PABA 1DCOA 3MMLB 4BXXC 2KPUA 5FLMC 2KQ1A 3OREA 1XXCA 4GTLA 4QIWD 5D4DA 2WAQL 5EGHA 1G51A 1F7VA 4A3MC 1TWFK 3HOZK 5M5YK 3HOUK 5IYCK 1YNJA 1O24A 4RMFA 1KQ4A 3GTKA 3Q3QA 3S1QC 2PA8D 3M4OC 1O25A 4GTDA 4OIRA 4G7HA 3S1RC 4QIWL 4ZH4A 2R7ZK 4IOCS 2E2JC 1J6XA 4WCES 3GTOK 4BBSK 2ZUEA 1B4AA 3GTQC 2PHCB 2PA8L 3GEIA 1PJ5A 1VLOA 4P5AA 1PJ7A 4Y7NC 2O5IA 3A8IA 4LR2A 4BLAA 2VUMA 4BY1C 1WQFA 5TMFA 1WOSA 1TWGC 4AYBD 1ISEA 2R93C 5IYDC 4KAWX 3CQZC 1L0WA 2YU9K 3S2DK 5FJ8K 3HOXC 2ZJPS 4A3LC 4KMUA 3HOVC 4A3CK 4GZYA 4M1XA 4WJ4A 4A3KK 4J3NA 2JA7K 3TTGA 4GTFA 2E2HC 1I6HC 4A3FK 4GFQA 5C4JK 2R92K 3HKZD 4AYBL 3S17C 4KDDA 5IP9C 1IBAA 1WCMC 4C2MC 3H3VL 3GTQA 4G7OA 3FOFA 4KM8A 5L46A 1O26A 3TFJA 1O27A 3FKIK 4GT9A 1WIHA 3GTPK 5JFEA 1F9NA 1VRQC 5M5XK 4A3GC 4KB2A 2B63A 2V6SA 2CFAB 2NVYC 3HKZL 3S15C 3S2HC 1IW7A 4C3HK 3S1NK 4A3BK 1USMA 2NVQK 2NVXA 2R93A 5IOSA 2Y0SD 3S1MK 4A3DC 3M3YC 2KXYA 3BP8C 4A3JK 1XZPA 3A8KA 2E2HA 5IP7C 4IOAS 1TWFC 3OEPA 3HOZC 3I4MK 2L3UA 1TWAK 3HOUC 4MQ9A 3HXAA 5IYCC 4O2DA 2JH3A 1WCMA 4QJVA 4ILDA 1TWCA 3TFIA 1O2FB 4KMDA 5EGEA 3I4NC 2A6EA 1ZXOA 4KM9A 3GEEA 4X6AK 5C44K 3WODA 2E2IK 1I50C 2WB1D 1EH1A 2JA5K 1GE9A 3LAPA 1V5VA 1HI9A 3GTOC 4BBSC 2NVTK 1ZYRA 2JA8K 3HOYK 1TWHC 1DCHA 4PAAA 1Y1VK 3DLLS 4XSZA 3GIRA 3JSTA 2WB1L 3GTKK 4Y52K 1R9TC 1EK8A 1XPPA 3N3YA 1XXBA 3T00A 3DXJA 2P8TA 3GTMC 3S14K 3GEHA 1WSVA 5DM7S 4OIOA 2YU9C 1JVIA 3VA7A 3PO2K 4U67S 5C3EK 4A93C 4XLNA 2JA7C 2FQOA 2A69A 1I50A 5HQHA 1BGWA 1JOEA 3FHZA 3EQLA 4QJVB 1WQHA 5M3FK 2CW0A 2R92C 4WFAS 5FLMK 4FZBA 2GSOA 4BY7K 3H0GC 4NOIA 2VUMK 1WOOA 2XCOA 4OIPA 1TWHA 4A3MK 1J6WA 1O2AA 1BS2A 3FKIC 1C0AA 3AH5A 3PO3C 4WFBS 1DD5A 3OPFA 5JVHS 1SFOK 3ADAC 2JA6C 4KARA 1R9TA 3GTJC 4LQYA 4A3BC 3S1NC 3RZOK 3GTMA 4C3IK 5DM6S 4XSXA 2PPBA 3GTLK 2V6UA 4OIQA 3S1MC 2E2JK 3K7AK 3S16K 4A3JC 3GTQK 1XZQA 4Q5SA 2JA7A 4YFNA 3AD7C 4KC6A 1I3QC 5TJ3A 1K83C 4Q4ZA 1J6VA 2R92A 4C3JC 3BUEA 3I4MC 4A3IC 3GTGC 1TWAC 4BBRC 1F93A 3H0GA 4DDQA 1TWGA 2B63K 1WORA 5C4XC 2GAHC 1EQRA 4LK0A 3CQZA 5M5WK 2NVXK 4WJ3M 5C44C 2E2IC 4WF9S 4KATA 4XCHA 3HOXK 1Y1WK 3IPJA 3ERED 5E68A 4G7ZA 5IYBK 2JA6A 4OINA 3GTJA 1I6VA 4WFNS 4XLPA 4LK1A 4P5BA 2NVTC 5IORA 4LJZA 3QX3A 5M3MK 3HOYC 3G4CA 1RU0A 2Y0SL 1Y1VC 1YCLA 2RGRA 5TMCA 4BKWA 4A3EK 1SMYA 4C2MK 3GTKC 1WQGA 4Y52C 1TWCK 3TFHA 1ZBSA 1I3QA 1PJ6A 1HQMA 3S14C 1K83A 3PIPS 5JVOA 2R7ZC 4LOWA 3A8JA 3T01A 2O5JA 3G4AA 4G0UA 3L4JA 1ZQ1C 5CHPA 3HOWK 3GTGA 2NVYA 3SZZA 3BP3A 1VGXA 1J98A 3GDZA 5C3EC 4P9SA 3V4GA 3LYWA 1F7UA 3RZDK 1X31C 5CJ9A 3PIOS 3N0BA 4G0WA 5IOTA 4KB4A 4BY7C 1FEUA 1B4BA 1WSRA 2VUMC 2D6FC 4YFKA 5IP7K 1BDFA 1TWFA 3CAGA 4MEYA 2XCQA 1XZPB 3S2DC 1Y1VA 1VH2A 2W7VA 4A3CC 1SFOC 2ZFZA 1WOPA 4A3KC 3I4NK 1USOA 3RZOC 1I50K 4A3FC 4C3IC 5C4JC 2R7ZA 3L4KA 1EI6A 4BXXK 3SZYA 3GTLC 1EFWA 3GTOA 3AD9C 2ZUFA 3K7AC 3S16C 1JQWA 3LPXA 4FM9A 4BLBA 4AH6A 4GTBA 4KN4A 4KMAA 1TWHK 2RH6A 4LLGA 2CFAA 3GSIA 5HL7S 3GTPC 5HL8A 3S1QK 1BJTA 2ZJQS 1IL2A 3M4OK 2PMZD 4C3HC 1R9TK 2B63C 3S1RK 2NVQC 2P5MA 3GTMK 4IO9S 2NVXC 2YU9A 1IS1A 2EBBA 2V6TA 4C45A 3H3VD 1Y1WC 1VJEA 1SFOA 4YFXA 5IYBC 3CF5S 3FOEA 2FQTA 4YG2A 4A93K 2PMZL 1O28A 4GTEA 4Y7NK 1INNA 1AB4A 3GTLA 3AQOA 3AD8C 4BY1K 3H0GK 1TWGK 2GSNA 1YX2A 4A3EC 1TWCC 2R93K 4X6AC 5IYDK 2JA5C 3CQZK 1UV7A 3FKIA 2KWAA 3GTPA 4A3LK 3S0XA 4KMHA 3PO3K 1ZVUA 3HOVK 3HOWC 2BE5A 2JA6K 3GTJK 2E2HK 1I6HK 2JA8C
chains in the Genus database with same CATH topology
2A69A 1I6HC 4A3FK 2A68A 4MEXA 3RZDK 5C4JK 3S17K 4JK1A 3EQLA 3HKZD 3RZDC 4QJVB 5IP9K 4AYBL 3S17C 2CW0A 5M3FK 2R92C 5IP9C 1YNNA 1WCMK 5FLMK 2R92K 4BY7K 1I6HK 1WCMC 3H0GC 4C2MC 4NOIA 4BY7C 2VUMK 3H3VL 4KN7A 2VUMC 4G7OA 4YFKA 4OIPA 5IP7K 1BDFA 4A3MK 4MEYA 1I3QK 2A6HA 1K83K 3FKIK 3GTPK 4A3GK 3FKIC 3S2DC 3PO3C 4C3JK 2WAQD 5M5XK 4A3GC 4A3IK 2NVYK 3GTGK 3PO2C 3S15K 1SFOK 4BBRK 3S2HK 2JA6C 2NVYC 4A3CC 3HKZL 3S15C 1SFOC 1IW7A 3GTJC 3S2HC 4C3HK 4A3KC 3S1NK 4A3BK 4A3BC 3S1NC 3I4NK 2NVQK 3RZOK 5C4XK 4C3IK 3RZOC 4A3DK 4XSXA 4A3FC 1I50K 2Y0SD 4C3IC 2PPBA 5C4JC 3S1MK 4A3DC 3M3YK 3GTLK 4OIQA 4BXXK 3S1MC 2E2JK 3M3YC 3GTLC 4BXXC 4A3JK 5FLMC 3K7AK 3S16K 4A3JC 3K7AC 4QIWD 5D4DA 3S16C 2WAQL 3GTQK 4Q5SA 4YFNA 5IP7C 4A3MC 4KN4A 1TWHK 1I3QC 1TWFK 4LLGA 1K83C 4Q4ZA 5M5YK 3HOZK 1TWFC 3GTPC 3HOUK 3HOZC 1YNJA 5IYCK 4C3JC 3I4MK 1TWAK 3HOUC 4MQ9A 5IYCC 3I4MC 4A3IC 3GTGC 3S1QK 1TWAC 3M4OK 4BBRC 2B63K 2PMZD 3S1QC 2PA8D 4QJVA 4C3HC 3M4OC 2B63C 1R9TK 4OIRA 4G7HA 3S1RK 3I4NC 2A6EA 2NVQC 5C4XC 3S1RC 3GTMK 5C44K 3WODA 2E2IK 4LK0A 1I50C 2WB1D 5M5WK 4QIWL 2JA5K 2NVXK 5C44C 2E2IC 2NVXC 4ZH4A 2R7ZK 2E2JC 3HOXK 1Y1WK 3H3VD 4G7ZA 1Y1WC 5IYBK 3GTOK 4BBSK 4OINA 1I6VA 4YFXA 5IYBC 3GTOC 4BBSC 4XLPA 4YG2A 3GTQC 2NVTK 4A93K 4LK1A 1ZYRA 2NVTC 2JA8K 2PMZL 3HOYK 1TWHC 2PA8L 4LJZA 4Y7NK 5M3MK 3HOYC 4Y7NC 1Y1VK 4XSZA 2O5IA 2Y0SL 1Y1VC 2WB1L 4BY1K 5TMCA 3GTKK 4A3EK 3H0GK 1SMYA 1R9TC 1TWGK 4BY1C 4C2MK 3GTKC 4Y52K 4A3EC 1XPPA 5TMFA 4Y52C 1TWGC 1TWCK 3DXJA 4AYBD 1TWCC 2R93K 4X6AC 3GTMC 3S14K 5IYDK 2JA5C 2R93C 5IYDC 3CQZK 1HQMA 3S14C 2R7ZC 3CQZC 4X6AK 2YU9K 2O5JA 4A3LK 2JA7C 3PO3K 3S2DK 5FJ8K 3HOXC 4OIOA 2YU9C 4A3LC 3HOWK 4KMUA 3HOVK 3HOWC 3PO2K 2BE5A 2JA6K 3HOVC 4A3CK 4GZYA 5C3EK 3GTJK 4A3KK 2E2HK 5C3EC 4A93C 2JA7K 4XLNA 2E2HC 2JA8C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A69 A;  1I6H C;  4A3F K;  2A68 A;  4MEX A;  3RZD K;  5C4J K;  3S17 K;  4JK1 A;  3EQL A;  3HKZ D;  3RZD C;  4QJV B;  5IP9 K;  4AYB L;  3S17 C;  2CW0 A;  5M3F K;  2R92 C;  5IP9 C;  1YNN A;  1WCM K;  5FLM K;  2R92 K;  4BY7 K;  1I6H K;  1WCM C;  3H0G C;  4C2M C;  4NOI A;  4BY7 C;  2VUM K;  3H3V L;  4KN7 A;  2VUM C;  4G7O A;  4YFK A;  4OIP A;  5IP7 K;  1BDF A;  4A3M K;  4MEY A;  1I3Q K;  2A6H A;  1K83 K;  3FKI K;  3GTP K;  4A3G K;  3FKI C;  3S2D C;  3PO3 C;  4C3J K;  2WAQ D;  5M5X K;  4A3G C;  4A3I K;  2NVY K;  3GTG K;  3PO2 C;  3S15 K;  1SFO K;  4BBR K;  3S2H K;  2JA6 C;  2NVY C;  4A3C C;  3HKZ L;  3S15 C;  1SFO C;  1IW7 A;  3GTJ C;  3S2H C;  4C3H K;  4A3K C;  3S1N K;  4A3B K;  4A3B C;  3S1N C;  3I4N K;  2NVQ K;  3RZO K;  5C4X K;  4C3I K;  3RZO C;  4A3D K;  4XSX A;  4A3F C;  1I50 K;  2Y0S D;  4C3I C;  2PPB A;  5C4J C;  3S1M K;  4A3D C;  3M3Y K;  3GTL K;  4OIQ A;  4BXX K;  3S1M C;  2E2J K;  3M3Y C;  3GTL C;  4BXX C;  4A3J K;  5FLM C;  3K7A K;  3S16 K;  4A3J C;  3K7A C;  4QIW D;  5D4D A;  3S16 C;  2WAQ L;  3GTQ K;  4Q5S A;  4YFN A;  5IP7 C;  4A3M C;  4KN4 A;  1TWH K;  1I3Q C;  1TWF K;  4LLG A;  1K83 C;  4Q4Z A;  5M5Y K;  3HOZ K;  1TWF C;  3GTP C;  3HOU K;  3HOZ C;  1YNJ A;  5IYC K;  4C3J C;  3I4M K;  1TWA K;  3HOU C;  4MQ9 A;  5IYC C;  3I4M C;  4A3I C;  3GTG C;  3S1Q K;  1TWA C;  3M4O K;  4BBR C;  2B63 K;  2PMZ D;  3S1Q C;  2PA8 D;  4QJV A;  4C3H C;  3M4O C;  2B63 C;  1R9T K;  4OIR A;  4G7H A;  3S1R K;  3I4N C;  2A6E A;  2NVQ C;  5C4X C;  3S1R C;  3GTM K;  5C44 K;  3WOD A;  2E2I K;  4LK0 A;  1I50 C;  2WB1 D;  5M5W K;  4QIW L;  2JA5 K;  2NVX K;  5C44 C;  2E2I C;  2NVX C;  4ZH4 A;  2R7Z K;  2E2J C;  3HOX K;  1Y1W K;  3H3V D;  4G7Z A;  1Y1W C;  5IYB K;  3GTO K;  4BBS K;  4OIN A;  1I6V A;  4YFX A;  5IYB C;  3GTO C;  4BBS C;  4XLP A;  4YG2 A;  3GTQ C;  2NVT K;  4A93 K;  4LK1 A;  1ZYR A;  2NVT C;  2JA8 K;  2PMZ L;  3HOY K;  1TWH C;  2PA8 L;  4LJZ A;  4Y7N K;  5M3M K;  3HOY C;  4Y7N C;  1Y1V K;  4XSZ A;  2O5I A;  2Y0S L;  1Y1V C;  2WB1 L;  4BY1 K;  5TMC A;  3GTK K;  4A3E K;  3H0G K;  1SMY A;  1R9T C;  1TWG K;  4BY1 C;  4C2M K;  3GTK C;  4Y52 K;  4A3E C;  1XPP A;  5TMF A;  4Y52 C;  1TWG C;  1TWC K;  3DXJ A;  4AYB D;  1TWC C;  2R93 K;  4X6A C;  3GTM C;  3S14 K;  5IYD K;  2JA5 C;  2R93 C;  5IYD C;  3CQZ K;  1HQM A;  3S14 C;  2R7Z C;  3CQZ C;  4X6A K;  2YU9 K;  2O5J A;  4A3L K;  2JA7 C;  3PO3 K;  3S2D K;  5FJ8 K;  3HOX C;  4OIO A;  2YU9 C;  4A3L C;  3HOW K;  4KMU A;  3HOV K;  3HOW C;  3PO2 K;  2BE5 A;  2JA6 K;  3HOV C;  4A3C K;  4GZY A;  5C3E K;  3GTJ K;  4A3K K;  2E2H K;  5C3E C;  4A93 C;  2JA7 K;  4XLN A;  2E2H C;  2JA8 C; 
#chains in the Genus database with same CATH topology
 1XXA A;  2A68 A;  4MEX A;  3S17 K;  4JK1 A;  3RZD C;  4WIL A;  5IP9 K;  3AQP A;  1YNN A;  2ZJR S;  4KAS A;  1WCM K;  3NUH A;  1Y1W A;  4G0V A;  1O29 A;  4KN7 A;  2GSU A;  1O2B A;  2Y3P A;  1I3Q K;  2A6H A;  1K83 K;  4A3G K;  1DCP A;  1XZQ B;  1TWA A;  4GTC A;  3T02 A;  4C3J K;  2XCR B;  2WAQ D;  4GTA A;  4A3I K;  2NVY K;  3GTG K;  3PO2 C;  3S15 K;  3S2H K;  4BBR K;  5IOQ A;  5C4X K;  2GAG C;  2E2I A;  5JVG S;  2JA5 A;  4A3D K;  1IQ0 A;  3M3Y K;  3LAJ A;  1IE0 A;  3N0C A;  2L5N A;  4PAB A;  1DCO A;  3MML B;  4BXX C;  2KPU A;  5FLM C;  2KQ1 A;  3ORE A;  1XXC A;  4GTL A;  4QIW D;  5D4D A;  2WAQ L;  5EGH A;  1G51 A;  1F7V A;  4A3M C;  1TWF K;  3HOZ K;  5M5Y K;  3HOU K;  5IYC K;  1YNJ A;  1O24 A;  4RMF A;  1KQ4 A;  3GTK A;  3Q3Q A;  3S1Q C;  2PA8 D;  3M4O C;  1O25 A;  4GTD A;  4OIR A;  4G7H A;  3S1R C;  4QIW L;  4ZH4 A;  2R7Z K;  4IOC S;  2E2J C;  1J6X A;  4WCE S;  3GTO K;  4BBS K;  2ZUE A;  1B4A A;  3GTQ C;  2PHC B;  2PA8 L;  3GEI A;  1PJ5 A;  1VLO A;  4P5A A;  1PJ7 A;  4Y7N C;  2O5I A;  3A8I A;  4LR2 A;  4BLA A;  2VUM A;  4BY1 C;  1WQF A;  5TMF A;  1WOS A;  1TWG C;  4AYB D;  1ISE A;  2R93 C;  5IYD C;  4KAW X;  3CQZ C;  1L0W A;  2YU9 K;  3S2D K;  5FJ8 K;  3HOX C;  2ZJP S;  4A3L C;  4KMU A;  3HOV C;  4A3C K;  4GZY A;  4M1X A;  4WJ4 A;  4A3K K;  4J3N A;  2JA7 K;  3TTG A;  4GTF A;  2E2H C;  1I6H C;  4A3F K;  4GFQ A;  5C4J K;  2R92 K;  3HKZ D;  4AYB L;  3S17 C;  4KDD A;  5IP9 C;  1IBA A;  1WCM C;  4C2M C;  3H3V L;  3GTQ A;  4G7O A;  3FOF A;  4KM8 A;  5L46 A;  1O26 A;  3TFJ A;  1O27 A;  3FKI K;  4GT9 A;  1WIH A;  3GTP K;  5JFE A;  1F9N A;  1VRQ C;  5M5X K;  4A3G C;  4KB2 A;  2B63 A;  2V6S A;  2CFA B;  2NVY C;  3HKZ L;  3S15 C;  3S2H C;  1IW7 A;  4C3H K;  3S1N K;  4A3B K;  1USM A;  2NVQ K;  2NVX A;  2R93 A;  5IOS A;  2Y0S D;  3S1M K;  4A3D C;  3M3Y C;  2KXY A;  3BP8 C;  4A3J K;  1XZP A;  3A8K A;  2E2H A;  5IP7 C;  4IOA S;  1TWF C;  3OEP A;  3HOZ C;  3I4M K;  2L3U A;  1TWA K;  3HOU C;  4MQ9 A;  3HXA A;  5IYC C;  4O2D A;  2JH3 A;  1WCM A;  4QJV A;  4ILD A;  1TWC A;  3TFI A;  1O2F B;  4KMD A;  5EGE A;  3I4N C;  2A6E A;  1ZXO A;  4KM9 A;  3GEE A;  4X6A K;  5C44 K;  3WOD A;  2E2I K;  1I50 C;  2WB1 D;  1EH1 A;  2JA5 K;  1GE9 A;  3LAP A;  1V5V A;  1HI9 A;  3GTO C;  4BBS C;  2NVT K;  1ZYR A;  2JA8 K;  3HOY K;  1TWH C;  1DCH A;  4PAA A;  1Y1V K;  3DLL S;  4XSZ A;  3GIR A;  3JST A;  2WB1 L;  3GTK K;  4Y52 K;  1R9T C;  1EK8 A;  1XPP A;  3N3Y A;  1XXB A;  3T00 A;  3DXJ A;  2P8T A;  3GTM C;  3S14 K;  3GEH A;  1WSV A;  5DM7 S;  4OIO A;  2YU9 C;  1JVI A;  3VA7 A;  3PO2 K;  4U67 S;  5C3E K;  4A93 C;  4XLN A;  2JA7 C;  2FQO A;  2A69 A;  1I50 A;  5HQH A;  1BGW A;  1JOE A;  3FHZ A;  3EQL A;  4QJV B;  1WQH A;  5M3F K;  2CW0 A;  2R92 C;  4WFA S;  5FLM K;  4FZB A;  2GSO A;  4BY7 K;  3H0G C;  4NOI A;  2VUM K;  1WOO A;  2XCO A;  4OIP A;  1TWH A;  4A3M K;  1J6W A;  1O2A A;  1BS2 A;  3FKI C;  1C0A A;  3AH5 A;  3PO3 C;  4WFB S;  1DD5 A;  3OPF A;  5JVH S;  1SFO K;  3ADA C;  2JA6 C;  4KAR A;  1R9T A;  3GTJ C;  4LQY A;  4A3B C;  3S1N C;  3RZO K;  3GTM A;  4C3I K;  5DM6 S;  4XSX A;  2PPB A;  3GTL K;  2V6U A;  4OIQ A;  3S1M C;  2E2J K;  3K7A K;  3S16 K;  4A3J C;  3GTQ K;  1XZQ A;  4Q5S A;  2JA7 A;  4YFN A;  3AD7 C;  4KC6 A;  1I3Q C;  5TJ3 A;  1K83 C;  4Q4Z A;  1J6V A;  2R92 A;  4C3J C;  3BUE A;  3I4M C;  4A3I C;  3GTG C;  1TWA C;  4BBR C;  1F93 A;  3H0G A;  4DDQ A;  1TWG A;  2B63 K;  1WOR A;  5C4X C;  2GAH C;  1EQR A;  4LK0 A;  3CQZ A;  5M5W K;  2NVX K;  4WJ3 M;  5C44 C;  2E2I C;  4WF9 S;  4KAT A;  4XCH A;  3HOX K;  1Y1W K;  3IPJ A;  3ERE D;  5E68 A;  4G7Z A;  5IYB K;  2JA6 A;  4OIN A;  3GTJ A;  1I6V A;  4WFN S;  4XLP A;  4LK1 A;  4P5B A;  2NVT C;  5IOR A;  4LJZ A;  3QX3 A;  5M3M K;  3HOY C;  3G4C A;  1RU0 A;  2Y0S L;  1Y1V C;  1YCL A;  2RGR A;  5TMC A;  4BKW A;  4A3E K;  1SMY A;  4C2M K;  3GTK C;  1WQG A;  4Y52 C;  1TWC K;  3TFH A;  1ZBS A;  1I3Q A;  1PJ6 A;  1HQM A;  3S14 C;  1K83 A;  3PIP S;  5JVO A;  2R7Z C;  4LOW A;  3A8J A;  3T01 A;  2O5J A;  3G4A A;  4G0U A;  3L4J A;  1ZQ1 C;  5CHP A;  3HOW K;  3GTG A;  2NVY A;  3SZZ A;  3BP3 A;  1VGX A;  1J98 A;  3GDZ A;  5C3E C;  4P9S A;  3V4G A;  3LYW A;  1F7U A;  3RZD K;  1X31 C;  5CJ9 A;  3PIO S;  3N0B A;  4G0W A;  5IOT A;  4KB4 A;  4BY7 C;  1FEU A;  1B4B A;  1WSR A;  2VUM C;  2D6F C;  4YFK A;  5IP7 K;  1BDF A;  1TWF A;  3CAG A;  4MEY A;  2XCQ A;  1XZP B;  3S2D C;  1Y1V A;  1VH2 A;  2W7V A;  4A3C C;  1SFO C;  2ZFZ A;  1WOP A;  4A3K C;  3I4N K;  1USO A;  3RZO C;  1I50 K;  4A3F C;  4C3I C;  5C4J C;  2R7Z A;  3L4K A;  1EI6 A;  4BXX K;  3SZY A;  3GTL C;  1EFW A;  3GTO A;  3AD9 C;  2ZUF A;  3K7A C;  3S16 C;  1JQW A;  3LPX A;  4FM9 A;  4BLB A;  4AH6 A;  4GTB A;  4KN4 A;  4KMA A;  1TWH K;  2RH6 A;  4LLG A;  2CFA A;  3GSI A;  5HL7 S;  3GTP C;  5HL8 A;  3S1Q K;  1BJT A;  2ZJQ S;  1IL2 A;  3M4O K;  2PMZ D;  4C3H C;  1R9T K;  2B63 C;  3S1R K;  2NVQ C;  2P5M A;  3GTM K;  4IO9 S;  2NVX C;  2YU9 A;  1IS1 A;  2EBB A;  2V6T A;  4C45 A;  3H3V D;  1Y1W C;  1VJE A;  1SFO A;  4YFX A;  5IYB C;  3CF5 S;  3FOE A;  2FQT A;  4YG2 A;  4A93 K;  2PMZ L;  1O28 A;  4GTE A;  4Y7N K;  1INN A;  1AB4 A;  3GTL A;  3AQO A;  3AD8 C;  4BY1 K;  3H0G K;  1TWG K;  2GSN A;  1YX2 A;  4A3E C;  1TWC C;  2R93 K;  4X6A C;  5IYD K;  2JA5 C;  3CQZ K;  1UV7 A;  3FKI A;  2KWA A;  3GTP A;  4A3L K;  3S0X A;  4KMH A;  3PO3 K;  1ZVU A;  3HOV K;  3HOW C;  2BE5 A;  2JA6 K;  3GTJ K;  2E2H K;  1I6H K;  2JA8 C; 
#chains in the Genus database with same CATH homology
 2A69 A;  1I6H C;  4A3F K;  2A68 A;  4MEX A;  3RZD K;  5C4J K;  3S17 K;  4JK1 A;  3EQL A;  3HKZ D;  3RZD C;  4QJV B;  5IP9 K;  4AYB L;  3S17 C;  2CW0 A;  5M3F K;  2R92 C;  5IP9 C;  1YNN A;  1WCM K;  5FLM K;  2R92 K;  4BY7 K;  1I6H K;  1WCM C;  3H0G C;  4C2M C;  4NOI A;  4BY7 C;  2VUM K;  3H3V L;  4KN7 A;  2VUM C;  4G7O A;  4YFK A;  4OIP A;  5IP7 K;  1BDF A;  4A3M K;  4MEY A;  1I3Q K;  2A6H A;  1K83 K;  3FKI K;  3GTP K;  4A3G K;  3FKI C;  3S2D C;  3PO3 C;  4C3J K;  2WAQ D;  5M5X K;  4A3G C;  4A3I K;  2NVY K;  3GTG K;  3PO2 C;  3S15 K;  1SFO K;  4BBR K;  3S2H K;  2JA6 C;  2NVY C;  4A3C C;  3HKZ L;  3S15 C;  1SFO C;  1IW7 A;  3GTJ C;  3S2H C;  4C3H K;  4A3K C;  3S1N K;  4A3B K;  4A3B C;  3S1N C;  3I4N K;  2NVQ K;  3RZO K;  5C4X K;  4C3I K;  3RZO C;  4A3D K;  4XSX A;  4A3F C;  1I50 K;  2Y0S D;  4C3I C;  2PPB A;  5C4J C;  3S1M K;  4A3D C;  3M3Y K;  3GTL K;  4OIQ A;  4BXX K;  3S1M C;  2E2J K;  3M3Y C;  3GTL C;  4BXX C;  4A3J K;  5FLM C;  3K7A K;  3S16 K;  4A3J C;  3K7A C;  4QIW D;  5D4D A;  3S16 C;  2WAQ L;  3GTQ K;  4Q5S A;  4YFN A;  5IP7 C;  4A3M C;  4KN4 A;  1TWH K;  1I3Q C;  1TWF K;  4LLG A;  1K83 C;  4Q4Z A;  5M5Y K;  3HOZ K;  1TWF C;  3GTP C;  3HOU K;  3HOZ C;  1YNJ A;  5IYC K;  4C3J C;  3I4M K;  1TWA K;  3HOU C;  4MQ9 A;  5IYC C;  3I4M C;  4A3I C;  3GTG C;  3S1Q K;  1TWA C;  3M4O K;  4BBR C;  2B63 K;  2PMZ D;  3S1Q C;  2PA8 D;  4QJV A;  4C3H C;  3M4O C;  2B63 C;  1R9T K;  4OIR A;  4G7H A;  3S1R K;  3I4N C;  2A6E A;  2NVQ C;  5C4X C;  3S1R C;  3GTM K;  5C44 K;  3WOD A;  2E2I K;  4LK0 A;  1I50 C;  2WB1 D;  5M5W K;  4QIW L;  2JA5 K;  2NVX K;  5C44 C;  2E2I C;  2NVX C;  4ZH4 A;  2R7Z K;  2E2J C;  3HOX K;  1Y1W K;  3H3V D;  4G7Z A;  1Y1W C;  5IYB K;  3GTO K;  4BBS K;  4OIN A;  1I6V A;  4YFX A;  5IYB C;  3GTO C;  4BBS C;  4XLP A;  4YG2 A;  3GTQ C;  2NVT K;  4A93 K;  4LK1 A;  1ZYR A;  2NVT C;  2JA8 K;  2PMZ L;  3HOY K;  1TWH C;  2PA8 L;  4LJZ A;  4Y7N K;  5M3M K;  3HOY C;  4Y7N C;  1Y1V K;  4XSZ A;  2O5I A;  2Y0S L;  1Y1V C;  2WB1 L;  4BY1 K;  5TMC A;  3GTK K;  4A3E K;  3H0G K;  1SMY A;  1R9T C;  1TWG K;  4BY1 C;  4C2M K;  3GTK C;  4Y52 K;  4A3E C;  1XPP A;  5TMF A;  4Y52 C;  1TWG C;  1TWC K;  3DXJ A;  4AYB D;  1TWC C;  2R93 K;  4X6A C;  3GTM C;  3S14 K;  5IYD K;  2JA5 C;  2R93 C;  5IYD C;  3CQZ K;  1HQM A;  3S14 C;  2R7Z C;  3CQZ C;  4X6A K;  2YU9 K;  2O5J A;  4A3L K;  2JA7 C;  3PO3 K;  3S2D K;  5FJ8 K;  3HOX C;  4OIO A;  2YU9 C;  4A3L C;  3HOW K;  4KMU A;  3HOV K;  3HOW C;  3PO2 K;  2BE5 A;  2JA6 K;  3HOV C;  4A3C K;  4GZY A;  5C3E K;  3GTJ K;  4A3K K;  2E2H K;  5C3E C;  4A93 C;  2JA7 K;  4XLN A;  2E2H C;  2JA8 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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