1Y1WC

Complete rna polymerase ii elongation complex
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 1y1wC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 1y1wC01
2VUMC 3S17C 5C4JC 3GTPC 2NVYC 4KN7A 4BY1C 1Y1VK 3GTOK 3S1QK 3K7AK 3FKIC 1YNJA 3S2DC 4A3MC 1Y1WC 4A3FK 3HOYC 2R7ZK 3S1NK 4C3HK 4A3KC 5C4XC 4AYBD 3S2HC 3M3YC 1TWGC 3GTJK 2E2JK 3HOUC 3GTGC 4XSZA 4Q5SA 1TWHC 5IP9K 2Y0SL 3H3VD 5IP7K 2NVXK 4OIQA 3HOWK 4ZH4A 5C4JK 3GTOC 2E2IK 4BY1K 2NVQK 2JA8K 3PO2K 1I50C 2O5JA 2R7ZC 5TMCA 3M4OK 4C3HC 2WB1D 4A93C 2O5IA 4X6AC 3HOVC 4XLNA 2E2JC 3PO3C 4BBRC 5IP9C 2NVXC 5IP7C 5M5YK 3HOWC 3S16K 3S15K 4LJZA 4Q4ZA 3HOZK 2JA6C 2E2IC 3PO2C 4KMUA 2JA8C 2A68A 2NVQC 2PMZL 1R9TK 2R92K 1I50K 1WCMK 3M4OC 4A3JK 1BDFA 2YU9C 4A93K 1I3QK 4X6AK 3HOVK 4BXXK 4YG2A 3RZOC 3PO3K 5M5WK 4BBRK 2CW0A 3HKZD 5M3FK 3S16C 3S15C 5C44K 4LK0A 3CQZC 5IYBK 3HOZC 3S1NC 2WAQL 5FJ8K 2R92C 3GTKK 1I6HK 4A3IC 1YNNA 2JA6K 3HOXC 3DXJA 4JK1A 4C3IC 1SFOC 3I4NC 1WCMC 2PA8D 5C3EC 4A3JC 4XLPA 4OIPA 4QIWL 1I3QC 2YU9K 4Y52C 4BXXC 3H0GC 3GTPK 1TWCK 3RZOK 2A6EA 3S1RK 5C44C 5IYBC 4YFKA 3GTKC 2JA5K 1I6HC 3CQZK 4C3JK 1HQMA 5TMFA 4A3IK 3H3VL 4LLGA 3HOXK 2PPBA 4C3IK 4A3GK 1SFOK 3I4NK 5C3EK 3GTQC 4Y52K 2A6HA 4YFNA 1TWCC 4XSXA 3H0GK 4Y7NK 3S1RC 1IW7A 2WB1L 3GTMK 2JA5C 4BY7C 4BBSC 3RZDK 1TWAK 4C3JC 2Y0SD 4MEXA 4A3CK 2BE5A 3S14K 4A3DK 4C2MK 4A3BK 4MEYA 2WAQD 4A3GC 3S1MK 2R93K 2B63K 1TWFK 4A3LK 3GTQK 4GZYA 5IYCK 1R9TC 4OINA 4QJVB 4YFXA 4LK1A 4Y7NC 3GTLC 4G7OA 1K83K 1XPPA 4QIWD 3I4MC 4A3EK 2E2HK 2JA7K 3WODA 2NVTK 3GTMC 3RZDC 4A3CC 1TWAC 4AYBL 4BY7K 4BBSK 1ZYRA 3S14C 4A3DC 5M5XK 4C2MC 4MQ9A 4A3BC 3S1MC 3HKZL 4G7ZA 2R93C 2A69A 2B63C 2PMZD 5M3MK 4OIRA 5IYDK 1TWFC 5FLMK 5IYCC 4G7HA 2VUMK 3S17K 1K83C 4A3LC 3S1QC 1Y1VC 2PA8L 2NVTC 3K7AC 4A3EC 3EQLA 2E2HC 2JA7C 2NVYK 3GTLK 3I4MK 4OIOA 4KN4A 4QJVA 4A3FC 1I6VA 3FKIK 4NOIA 4A3MK 1SMYA 1Y1WK 3S2DK 3HOYK 3GTJC 4A3KK 5C4XK 3S2HK 3M3YK 1TWGK 5IYDC 3HOUK 3GTGK 5FLMC 1TWHK 5D4DA
chains in the Genus database with same CATH superfamily
3GTQA 1USMA 4G0VA 3GTPC 2NVYC 4BY1C 1K83A 3S1QK 3ADAC 2E2HA 3FKIC 4WF9S 4A3FK 5C4XC 4AYBD 3GIRA 1O29A 1HI9A 5IP9K 3HOWK 1O24A 4GTEA 2VUMA 4ZH4A 3LPXA 2E2IK 2KWAA 5JVOA 3DLLS 1Y1WA 1WQFA 4C3HC 2WB1D 4X6AC 3PIOS 3HOVC 3LYWA 2E2JC 2ZFZA 5DM6S 4BBRC 5TJ3A 1C0AA 3LAPA 3S15K 3S16K 5EGEA 2JA6C 3HOZK 3PO2C 4KMUA 2JA8C 2A68A 3S1NK 1WOPA 1I50K 1J6VA 3G4CA 4A93K 1F9NA 3GTJA 3PO3K 2NVXA 5C44K 1BJTA 3GDZA 2KXYA 1WCMC 4A3JC 3OEPA 4Y52C 3N3YA 3TTGA 1TWCK 1F7VA 3S1RK 1V5VA 1WOSA 2Y3PA 5JFEA 1HQMA 4A3IK 1INNA 1DCPA 3I4NK 1G51A 3GTQC 1X31C 2PHCB 1ISEA 2FQOA 4WCES 1XZQB 4BY7C 3N0BA 4MEXA 2WAQD 3GEEA 1TWFK 4GZYA 1L0WA 5IYCK 2YU9A 1R9TC 4OINA 2XCRB 5M3MK 4G7OA 4A3LK 2NVTK 4QIWD 2V6TA 1F7UA 3GTMC 1O26A 4AYBL 1TWAC 3L4KA 2JA5A 1EQRA 3S14C 4A3DC 1XZQA 4MQ9A 4IO9S 4G7ZA 2R93C 2B63C 4G7HA 2PA8L 3GTPK 2NVYK 3K7AC 3H0GA 2JA7C 1WQGA 3I4MK 3FKIK 1I6VA 4NOIA 1SMYA 3SZYA 4KATA 3GTJC 2RH6A 4IOAS 5C4XK 2ZUEA 5IYDC 1ZXOA 5L46A 4G0UA 2GAHC 5FLMC 5E68A 1Y1VK 1YNJA 5CJ9A 3HOYC 4GFQA 4C3HK 4LQYA 1IBAA 2ZUFA 3M3YC 1TWGC 2E2JK 4P5BA 3GTGC 1PJ7A 1TWHC 2Y0SL 2ZJPS 1PJ6A 5C4JK 3GTOC 1O27A 4WILA 1IE0A 3PO2K 3GTLA 2JA8K 4WFNS 1WQHA 2R7ZC 2P8TA 4XLNA 1B4AA 1VJEA 5IP7C 3SZZA 4LJZA 4Q4ZA 1YX2A 2NVQC 3CF5S 1WCMK 3M4OC 4A3JK 1BDFA 2YU9C 4GTFA 4KB2A 4P9SA 2V6SA 4KMHA 2ZJQS 4YG2A 3RZOC 2CW0A 5M3FK 3CQZC 2WAQL 4DDQA 2R92C 1YNNA 2E2IA 3A8JA 2PA8D 1J98A 4XLPA 4OIPA 4KMDA 1I3QC 4QIWL 1GE9A 3H0GC 5JVGS 2A6EA 4KMAA 1ZQ1C 4YFKA 3GTKC 1VLOA 3H3VL 3HOXK 4C3IK 1I50A 1SFOK 5C3EK 4KASA 1O25A 1ZBSA 2A6HA 3S0XA 3MMLB 4P5AA 3GTMK 4BBSC 1TWAK 4C3JC 2Y0SD 4GTCA 2BE5A 2GAGC 2XCOA 4WFBS 4KM8A 3S14K 4A3DK 3IPJA 4MEYA 2R93K 4WJ4A 2B63K 1WIHA 3BUEA 4QJVB 1XPPA 4YFXA 2KPUA 4Y7NC 3GTLC 1TWCA 2JA7K 4A3CC 1WSVA 5M5XK 4C2MC 5IORA 4A3BC 3GEHA 3S1MC 4LR2A 5IYDK 1KQ4A 5FLMK 2L3UA 1K83C 3S1QC 2E2HC 3Q3QA 4QJVA 4A3FC 4BLBA 3QX3A 3HOYK 2GSUA 3M3YK 1TWGK 3GTGK 1TWHK 5EGHA 5D4DA 2VUMC 1WORA 1TWFA 3G4AA 2JH3A 3OPFA 3GTOK 4KM9A 3S2DC 1Y1WC 4J3NA 2R7ZK 4A3KC 5CHPA 3S2HC 3T01A 3HOUC 4XSZA 4Q5SA 1RU0A 1O2FB 1XXCA 3H3VD 4C45A 5IP7K 4OIQA 3AQOA 3FOFA 3GTPA 2NVYA 4BY1K 2NVQK 3HXAA 1I50C 2O5JA 3FKIA 3M4OK 1O2AA 4G0WA 4A93C 1BGWA 3AD8C 1EK8A 3PO3C 2NVXC 5M5YK 1J6XA 1O28A 2PMZL 2R92K 1EI6A 1Y1VA 3BP3A 4GTBA 3L4JA 3JSTA 1I3QK 4X6AK 3HOVK 1DCHA 4BLAA 1B4BA 4BBRK 5M5WK 5IOQA 4LK0A 1O2BA 3GTKK 4A3IC 1WSRA 3N0CA 2JA6K 4JK1A 2FQTA 3I4NC 1USOA 3VA7A 4GTAA 4BXXC 4AH6A 4XCHA 3T02A 5IYBC 1I6HC 3V4GA 4C3JK 3BP8C 1JOEA 1ZVUA 4LLGA 4M1XA 1VGXA 1WCMA 3TFJA 5HQHA 1JVIA 4Y52K 1AB4A 1EH1A 4Y7NK 2W7VA 2JA5C 4A3CK 4C2MK 4A3BK 4A3GC 4ILDA 3S1MK 1VH2A 4GTLA 4FM9A 4FZBA 3GTQK 1K83K 1IL2A 1VRQC 3I4MC 3TFHA 2E2HK 3A8KA 3RZDC 1FEUA 4BY7K 1ZYRA 3OREA 3HKZL 3AQPA 2PMZD 4OIRA 1SFOA 1J6WA 2VUMK 4O2DA 1R9TK 1R9TA 1Y1VC 1JQWA 3FHZA 4A3EC 3AH5A 1EFWA 4OIOA 3CAGA 2RGRA 3S2DK 3GTMA 1Y1WK 1TWAA 4A3KK 3S2HK 2GSNA 4IOCS 3HOUK 2R93A 2B63A 3GEIA 1XZPB 1WOOA 5HL8A 3S17C 5JVHS 4KB4A 5C4JC 3AD7C 4KN7A 5IOTA 3K7AK 2JA7A 4A3MC 4GTDA 3PIPS 3A8IA 2XCQA 3GTJK 2NVXK 4LOWA 1XXAA 2CFAB 1XZPA 4KARA 5TMCA 2P5MA 2O5IA 3T00A 1TWGA 5IP9C 3GTGA 2ZJRS 3HOWC 1TWHA 2GSOA 2V6UA 2E2IC 4GT9A 3GTOA 2CFAA 1UV7A 2R7ZA 4BXXK 1DD5A 4RMFA 3LAJA 4WFAS 3HKZD 2EBBA 3S16C 3S15C 5FJ8K 5IYBK 3HOZC 3S1NC 1BS2A 1I6HK 3HOXC 3DXJA 4C3IC 5HL7S 1SFOC 4KC6A 5C3EC 2YU9K 1IS1A 3RZOK 1F93A 5C44C 3GSIA 2JA5K 3CQZK 3CQZA 5TMFA 2R92A 2PPBA 4A3GK 2KQ1A 1XXBA 2L5NA 4PABA 1I3QA 4YFNA 3ERED 1TWCC 4XSXA 3H0GK 3S1RC 1IW7A 2WB1L 3RZDK 3GTKA 5IOSA 2JA6A 1DCOA 1IQ0A 4PAAA 4LK1A 3NUHA 4A3EK 3WODA 2D6FC 4BBSK 2A69A 4KAWX 1TWFC 3FOEA 5IYCC 3TFIA 3S17K 4KDDA 4A3LC 4WJ3M 2NVTC 3GTLK 3EQLA 1PJ5A 4KN4A 3AD9C 4A3MK 1YCLA 4BKWA 5DM7S 4U67S
chains in the Genus database with same CATH topology
2VUMC 3S17C 5C4JC 3GTPC 2NVYC 4KN7A 4BY1C 1Y1VK 3GTOK 3S1QK 3K7AK 3FKIC 1YNJA 3S2DC 4A3MC 1Y1WC 4A3FK 3HOYC 2R7ZK 3S1NK 4C3HK 4A3KC 5C4XC 4AYBD 3S2HC 3M3YC 1TWGC 3GTJK 2E2JK 3HOUC 3GTGC 4XSZA 4Q5SA 1TWHC 5IP9K 2Y0SL 3H3VD 5IP7K 2NVXK 4OIQA 3HOWK 4ZH4A 5C4JK 3GTOC 2E2IK 4BY1K 2NVQK 2JA8K 3PO2K 1I50C 2O5JA 2R7ZC 5TMCA 3M4OK 4C3HC 2WB1D 4A93C 2O5IA 4X6AC 3HOVC 4XLNA 2E2JC 3PO3C 4BBRC 5IP9C 2NVXC 5IP7C 5M5YK 3HOWC 3S16K 3S15K 4LJZA 4Q4ZA 3HOZK 2JA6C 2E2IC 3PO2C 4KMUA 2JA8C 2A68A 2NVQC 2PMZL 1R9TK 2R92K 1I50K 1WCMK 3M4OC 4A3JK 1BDFA 2YU9C 4A93K 1I3QK 4X6AK 3HOVK 4BXXK 4YG2A 3RZOC 3PO3K 5M5WK 4BBRK 2CW0A 3HKZD 5M3FK 3S16C 3S15C 5C44K 4LK0A 3CQZC 5IYBK 3HOZC 3S1NC 2WAQL 5FJ8K 2R92C 3GTKK 1I6HK 4A3IC 1YNNA 2JA6K 3HOXC 3DXJA 4JK1A 4C3IC 1SFOC 3I4NC 1WCMC 2PA8D 5C3EC 4A3JC 4XLPA 4OIPA 4QIWL 1I3QC 2YU9K 4Y52C 4BXXC 3H0GC 3GTPK 1TWCK 3RZOK 2A6EA 3S1RK 5C44C 5IYBC 4YFKA 3GTKC 2JA5K 1I6HC 3CQZK 4C3JK 1HQMA 5TMFA 4A3IK 3H3VL 4LLGA 3HOXK 2PPBA 4C3IK 4A3GK 1SFOK 3I4NK 5C3EK 3GTQC 4Y52K 2A6HA 4YFNA 1TWCC 4XSXA 3H0GK 4Y7NK 3S1RC 1IW7A 2WB1L 3GTMK 2JA5C 4BY7C 4BBSC 3RZDK 1TWAK 4C3JC 2Y0SD 4MEXA 4A3CK 2BE5A 3S14K 4A3DK 4C2MK 4A3BK 4MEYA 2WAQD 4A3GC 3S1MK 2R93K 2B63K 1TWFK 4A3LK 3GTQK 4GZYA 5IYCK 1R9TC 4OINA 4QJVB 4YFXA 4LK1A 4Y7NC 3GTLC 4G7OA 1K83K 1XPPA 4QIWD 3I4MC 4A3EK 2E2HK 2JA7K 3WODA 2NVTK 3GTMC 3RZDC 4A3CC 1TWAC 4AYBL 4BY7K 4BBSK 1ZYRA 3S14C 4A3DC 5M5XK 4C2MC 4MQ9A 4A3BC 3S1MC 3HKZL 4G7ZA 2R93C 2A69A 2B63C 2PMZD 5M3MK 4OIRA 5IYDK 1TWFC 5FLMK 5IYCC 4G7HA 2VUMK 3S17K 1K83C 4A3LC 3S1QC 1Y1VC 2PA8L 2NVTC 3K7AC 4A3EC 3EQLA 2E2HC 2JA7C 2NVYK 3GTLK 3I4MK 4OIOA 4KN4A 4QJVA 4A3FC 1I6VA 3FKIK 4NOIA 4A3MK 1SMYA 1Y1WK 3S2DK 3HOYK 3GTJC 4A3KK 5C4XK 3S2HK 3M3YK 1TWGK 5IYDC 3HOUK 3GTGK 5FLMC 1TWHK 5D4DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VUM C;  3S17 C;  5C4J C;  3GTP C;  2NVY C;  4KN7 A;  4BY1 C;  1Y1V K;  3GTO K;  3S1Q K;  3K7A K;  3FKI C;  1YNJ A;  3S2D C;  4A3M C;  1Y1W C;  4A3F K;  3HOY C;  2R7Z K;  3S1N K;  4C3H K;  4A3K C;  5C4X C;  4AYB D;  3S2H C;  3M3Y C;  1TWG C;  3GTJ K;  2E2J K;  3HOU C;  3GTG C;  4XSZ A;  4Q5S A;  1TWH C;  5IP9 K;  2Y0S L;  3H3V D;  5IP7 K;  2NVX K;  4OIQ A;  3HOW K;  4ZH4 A;  5C4J K;  3GTO C;  2E2I K;  4BY1 K;  2NVQ K;  2JA8 K;  3PO2 K;  1I50 C;  2O5J A;  2R7Z C;  5TMC A;  3M4O K;  4C3H C;  2WB1 D;  4A93 C;  2O5I A;  4X6A C;  3HOV C;  4XLN A;  2E2J C;  3PO3 C;  4BBR C;  5IP9 C;  2NVX C;  5IP7 C;  5M5Y K;  3HOW C;  3S16 K;  3S15 K;  4LJZ A;  4Q4Z A;  3HOZ K;  2JA6 C;  2E2I C;  3PO2 C;  4KMU A;  2JA8 C;  2A68 A;  2NVQ C;  2PMZ L;  1R9T K;  2R92 K;  1I50 K;  1WCM K;  3M4O C;  4A3J K;  1BDF A;  2YU9 C;  4A93 K;  1I3Q K;  4X6A K;  3HOV K;  4BXX K;  4YG2 A;  3RZO C;  3PO3 K;  5M5W K;  4BBR K;  2CW0 A;  3HKZ D;  5M3F K;  3S16 C;  3S15 C;  5C44 K;  4LK0 A;  3CQZ C;  5IYB K;  3HOZ C;  3S1N C;  2WAQ L;  5FJ8 K;  2R92 C;  3GTK K;  1I6H K;  4A3I C;  1YNN A;  2JA6 K;  3HOX C;  3DXJ A;  4JK1 A;  4C3I C;  1SFO C;  3I4N C;  1WCM C;  2PA8 D;  5C3E C;  4A3J C;  4XLP A;  4OIP A;  4QIW L;  1I3Q C;  2YU9 K;  4Y52 C;  4BXX C;  3H0G C;  3GTP K;  1TWC K;  3RZO K;  2A6E A;  3S1R K;  5C44 C;  5IYB C;  4YFK A;  3GTK C;  2JA5 K;  1I6H C;  3CQZ K;  4C3J K;  1HQM A;  5TMF A;  4A3I K;  3H3V L;  4LLG A;  3HOX K;  2PPB A;  4C3I K;  4A3G K;  1SFO K;  3I4N K;  5C3E K;  3GTQ C;  4Y52 K;  2A6H A;  4YFN A;  1TWC C;  4XSX A;  3H0G K;  4Y7N K;  3S1R C;  1IW7 A;  2WB1 L;  3GTM K;  2JA5 C;  4BY7 C;  4BBS C;  3RZD K;  1TWA K;  4C3J C;  2Y0S D;  4MEX A;  4A3C K;  2BE5 A;  3S14 K;  4A3D K;  4C2M K;  4A3B K;  4MEY A;  2WAQ D;  4A3G C;  3S1M K;  2R93 K;  2B63 K;  1TWF K;  4A3L K;  3GTQ K;  4GZY A;  5IYC K;  1R9T C;  4OIN A;  4QJV B;  4YFX A;  4LK1 A;  4Y7N C;  3GTL C;  4G7O A;  1K83 K;  1XPP A;  4QIW D;  3I4M C;  4A3E K;  2E2H K;  2JA7 K;  3WOD A;  2NVT K;  3GTM C;  3RZD C;  4A3C C;  1TWA C;  4AYB L;  4BY7 K;  4BBS K;  1ZYR A;  3S14 C;  4A3D C;  5M5X K;  4C2M C;  4MQ9 A;  4A3B C;  3S1M C;  3HKZ L;  4G7Z A;  2R93 C;  2A69 A;  2B63 C;  2PMZ D;  5M3M K;  4OIR A;  5IYD K;  1TWF C;  5FLM K;  5IYC C;  4G7H A;  2VUM K;  3S17 K;  1K83 C;  4A3L C;  3S1Q C;  1Y1V C;  2PA8 L;  2NVT C;  3K7A C;  4A3E C;  3EQL A;  2E2H C;  2JA7 C;  2NVY K;  3GTL K;  3I4M K;  4OIO A;  4KN4 A;  4QJV A;  4A3F C;  1I6V A;  3FKI K;  4NOI A;  4A3M K;  1SMY A;  1Y1W K;  3S2D K;  3HOY K;  3GTJ C;  4A3K K;  5C4X K;  3S2H K;  3M3Y K;  1TWG K;  5IYD C;  3HOU K;  3GTG K;  5FLM C;  1TWH K;  5D4D A; 
#chains in the Genus database with same CATH topology
 3GTQ A;  1USM A;  4G0V A;  3GTP C;  2NVY C;  4BY1 C;  1K83 A;  3S1Q K;  3ADA C;  2E2H A;  3FKI C;  4WF9 S;  4A3F K;  5C4X C;  4AYB D;  3GIR A;  1O29 A;  1HI9 A;  5IP9 K;  3HOW K;  1O24 A;  4GTE A;  2VUM A;  4ZH4 A;  3LPX A;  2E2I K;  2KWA A;  5JVO A;  3DLL S;  1Y1W A;  1WQF A;  4C3H C;  2WB1 D;  4X6A C;  3PIO S;  3HOV C;  3LYW A;  2E2J C;  2ZFZ A;  5DM6 S;  4BBR C;  5TJ3 A;  1C0A A;  3LAP A;  3S15 K;  3S16 K;  5EGE A;  2JA6 C;  3HOZ K;  3PO2 C;  4KMU A;  2JA8 C;  2A68 A;  3S1N K;  1WOP A;  1I50 K;  1J6V A;  3G4C A;  4A93 K;  1F9N A;  3GTJ A;  3PO3 K;  2NVX A;  5C44 K;  1BJT A;  3GDZ A;  2KXY A;  1WCM C;  4A3J C;  3OEP A;  4Y52 C;  3N3Y A;  3TTG A;  1TWC K;  1F7V A;  3S1R K;  1V5V A;  1WOS A;  2Y3P A;  5JFE A;  1HQM A;  4A3I K;  1INN A;  1DCP A;  3I4N K;  1G51 A;  3GTQ C;  1X31 C;  2PHC B;  1ISE A;  2FQO A;  4WCE S;  1XZQ B;  4BY7 C;  3N0B A;  4MEX A;  2WAQ D;  3GEE A;  1TWF K;  4GZY A;  1L0W A;  5IYC K;  2YU9 A;  1R9T C;  4OIN A;  2XCR B;  5M3M K;  4G7O A;  4A3L K;  2NVT K;  4QIW D;  2V6T A;  1F7U A;  3GTM C;  1O26 A;  4AYB L;  1TWA C;  3L4K A;  2JA5 A;  1EQR A;  3S14 C;  4A3D C;  1XZQ A;  4MQ9 A;  4IO9 S;  4G7Z A;  2R93 C;  2B63 C;  4G7H A;  2PA8 L;  3GTP K;  2NVY K;  3K7A C;  3H0G A;  2JA7 C;  1WQG A;  3I4M K;  3FKI K;  1I6V A;  4NOI A;  1SMY A;  3SZY A;  4KAT A;  3GTJ C;  2RH6 A;  4IOA S;  5C4X K;  2ZUE A;  5IYD C;  1ZXO A;  5L46 A;  4G0U A;  2GAH C;  5FLM C;  5E68 A;  1Y1V K;  1YNJ A;  5CJ9 A;  3HOY C;  4GFQ A;  4C3H K;  4LQY A;  1IBA A;  2ZUF A;  3M3Y C;  1TWG C;  2E2J K;  4P5B A;  3GTG C;  1PJ7 A;  1TWH C;  2Y0S L;  2ZJP S;  1PJ6 A;  5C4J K;  3GTO C;  1O27 A;  4WIL A;  1IE0 A;  3PO2 K;  3GTL A;  2JA8 K;  4WFN S;  1WQH A;  2R7Z C;  2P8T A;  4XLN A;  1B4A A;  1VJE A;  5IP7 C;  3SZZ A;  4LJZ A;  4Q4Z A;  1YX2 A;  2NVQ C;  3CF5 S;  1WCM K;  3M4O C;  4A3J K;  1BDF A;  2YU9 C;  4GTF A;  4KB2 A;  4P9S A;  2V6S A;  4KMH A;  2ZJQ S;  4YG2 A;  3RZO C;  2CW0 A;  5M3F K;  3CQZ C;  2WAQ L;  4DDQ A;  2R92 C;  1YNN A;  2E2I A;  3A8J A;  2PA8 D;  1J98 A;  4XLP A;  4OIP A;  4KMD A;  1I3Q C;  4QIW L;  1GE9 A;  3H0G C;  5JVG S;  2A6E A;  4KMA A;  1ZQ1 C;  4YFK A;  3GTK C;  1VLO A;  3H3V L;  3HOX K;  4C3I K;  1I50 A;  1SFO K;  5C3E K;  4KAS A;  1O25 A;  1ZBS A;  2A6H A;  3S0X A;  3MML B;  4P5A A;  3GTM K;  4BBS C;  1TWA K;  4C3J C;  2Y0S D;  4GTC A;  2BE5 A;  2GAG C;  2XCO A;  4WFB S;  4KM8 A;  3S14 K;  4A3D K;  3IPJ A;  4MEY A;  2R93 K;  4WJ4 A;  2B63 K;  1WIH A;  3BUE A;  4QJV B;  1XPP A;  4YFX A;  2KPU A;  4Y7N C;  3GTL C;  1TWC A;  2JA7 K;  4A3C C;  1WSV A;  5M5X K;  4C2M C;  5IOR A;  4A3B C;  3GEH A;  3S1M C;  4LR2 A;  5IYD K;  1KQ4 A;  5FLM K;  2L3U A;  1K83 C;  3S1Q C;  2E2H C;  3Q3Q A;  4QJV A;  4A3F C;  4BLB A;  3QX3 A;  3HOY K;  2GSU A;  3M3Y K;  1TWG K;  3GTG K;  1TWH K;  5EGH A;  5D4D A;  2VUM C;  1WOR A;  1TWF A;  3G4A A;  2JH3 A;  3OPF A;  3GTO K;  4KM9 A;  3S2D C;  1Y1W C;  4J3N A;  2R7Z K;  4A3K C;  5CHP A;  3S2H C;  3T01 A;  3HOU C;  4XSZ A;  4Q5S A;  1RU0 A;  1O2F B;  1XXC A;  3H3V D;  4C45 A;  5IP7 K;  4OIQ A;  3AQO A;  3FOF A;  3GTP A;  2NVY A;  4BY1 K;  2NVQ K;  3HXA A;  1I50 C;  2O5J A;  3FKI A;  3M4O K;  1O2A A;  4G0W A;  4A93 C;  1BGW A;  3AD8 C;  1EK8 A;  3PO3 C;  2NVX C;  5M5Y K;  1J6X A;  1O28 A;  2PMZ L;  2R92 K;  1EI6 A;  1Y1V A;  3BP3 A;  4GTB A;  3L4J A;  3JST A;  1I3Q K;  4X6A K;  3HOV K;  1DCH A;  4BLA A;  1B4B A;  4BBR K;  5M5W K;  5IOQ A;  4LK0 A;  1O2B A;  3GTK K;  4A3I C;  1WSR A;  3N0C A;  2JA6 K;  4JK1 A;  2FQT A;  3I4N C;  1USO A;  3VA7 A;  4GTA A;  4BXX C;  4AH6 A;  4XCH A;  3T02 A;  5IYB C;  1I6H C;  3V4G A;  4C3J K;  3BP8 C;  1JOE A;  1ZVU A;  4LLG A;  4M1X A;  1VGX A;  1WCM A;  3TFJ A;  5HQH A;  1JVI A;  4Y52 K;  1AB4 A;  1EH1 A;  4Y7N K;  2W7V A;  2JA5 C;  4A3C K;  4C2M K;  4A3B K;  4A3G C;  4ILD A;  3S1M K;  1VH2 A;  4GTL A;  4FM9 A;  4FZB A;  3GTQ K;  1K83 K;  1IL2 A;  1VRQ C;  3I4M C;  3TFH A;  2E2H K;  3A8K A;  3RZD C;  1FEU A;  4BY7 K;  1ZYR A;  3ORE A;  3HKZ L;  3AQP A;  2PMZ D;  4OIR A;  1SFO A;  1J6W A;  2VUM K;  4O2D A;  1R9T K;  1R9T A;  1Y1V C;  1JQW A;  3FHZ A;  4A3E C;  3AH5 A;  1EFW A;  4OIO A;  3CAG A;  2RGR A;  3S2D K;  3GTM A;  1Y1W K;  1TWA A;  4A3K K;  3S2H K;  2GSN A;  4IOC S;  3HOU K;  2R93 A;  2B63 A;  3GEI A;  1XZP B;  1WOO A;  5HL8 A;  3S17 C;  5JVH S;  4KB4 A;  5C4J C;  3AD7 C;  4KN7 A;  5IOT A;  3K7A K;  2JA7 A;  4A3M C;  4GTD A;  3PIP S;  3A8I A;  2XCQ A;  3GTJ K;  2NVX K;  4LOW A;  1XXA A;  2CFA B;  1XZP A;  4KAR A;  5TMC A;  2P5M A;  2O5I A;  3T00 A;  1TWG A;  5IP9 C;  3GTG A;  2ZJR S;  3HOW C;  1TWH A;  2GSO A;  2V6U A;  2E2I C;  4GT9 A;  3GTO A;  2CFA A;  1UV7 A;  2R7Z A;  4BXX K;  1DD5 A;  4RMF A;  3LAJ A;  4WFA S;  3HKZ D;  2EBB A;  3S16 C;  3S15 C;  5FJ8 K;  5IYB K;  3HOZ C;  3S1N C;  1BS2 A;  1I6H K;  3HOX C;  3DXJ A;  4C3I C;  5HL7 S;  1SFO C;  4KC6 A;  5C3E C;  2YU9 K;  1IS1 A;  3RZO K;  1F93 A;  5C44 C;  3GSI A;  2JA5 K;  3CQZ K;  3CQZ A;  5TMF A;  2R92 A;  2PPB A;  4A3G K;  2KQ1 A;  1XXB A;  2L5N A;  4PAB A;  1I3Q A;  4YFN A;  3ERE D;  1TWC C;  4XSX A;  3H0G K;  3S1R C;  1IW7 A;  2WB1 L;  3RZD K;  3GTK A;  5IOS A;  2JA6 A;  1DCO A;  1IQ0 A;  4PAA A;  4LK1 A;  3NUH A;  4A3E K;  3WOD A;  2D6F C;  4BBS K;  2A69 A;  4KAW X;  1TWF C;  3FOE A;  5IYC C;  3TFI A;  3S17 K;  4KDD A;  4A3L C;  4WJ3 M;  2NVT C;  3GTL K;  3EQL A;  1PJ5 A;  4KN4 A;  3AD9 C;  4A3M K;  1YCL A;  4BKW A;  5DM7 S;  4U67 S; 
#chains in the Genus database with same CATH homology
 2VUM C;  3S17 C;  5C4J C;  3GTP C;  2NVY C;  4KN7 A;  4BY1 C;  1Y1V K;  3GTO K;  3S1Q K;  3K7A K;  3FKI C;  1YNJ A;  3S2D C;  4A3M C;  1Y1W C;  4A3F K;  3HOY C;  2R7Z K;  3S1N K;  4C3H K;  4A3K C;  5C4X C;  4AYB D;  3S2H C;  3M3Y C;  1TWG C;  3GTJ K;  2E2J K;  3HOU C;  3GTG C;  4XSZ A;  4Q5S A;  1TWH C;  5IP9 K;  2Y0S L;  3H3V D;  5IP7 K;  2NVX K;  4OIQ A;  3HOW K;  4ZH4 A;  5C4J K;  3GTO C;  2E2I K;  4BY1 K;  2NVQ K;  2JA8 K;  3PO2 K;  1I50 C;  2O5J A;  2R7Z C;  5TMC A;  3M4O K;  4C3H C;  2WB1 D;  4A93 C;  2O5I A;  4X6A C;  3HOV C;  4XLN A;  2E2J C;  3PO3 C;  4BBR C;  5IP9 C;  2NVX C;  5IP7 C;  5M5Y K;  3HOW C;  3S16 K;  3S15 K;  4LJZ A;  4Q4Z A;  3HOZ K;  2JA6 C;  2E2I C;  3PO2 C;  4KMU A;  2JA8 C;  2A68 A;  2NVQ C;  2PMZ L;  1R9T K;  2R92 K;  1I50 K;  1WCM K;  3M4O C;  4A3J K;  1BDF A;  2YU9 C;  4A93 K;  1I3Q K;  4X6A K;  3HOV K;  4BXX K;  4YG2 A;  3RZO C;  3PO3 K;  5M5W K;  4BBR K;  2CW0 A;  3HKZ D;  5M3F K;  3S16 C;  3S15 C;  5C44 K;  4LK0 A;  3CQZ C;  5IYB K;  3HOZ C;  3S1N C;  2WAQ L;  5FJ8 K;  2R92 C;  3GTK K;  1I6H K;  4A3I C;  1YNN A;  2JA6 K;  3HOX C;  3DXJ A;  4JK1 A;  4C3I C;  1SFO C;  3I4N C;  1WCM C;  2PA8 D;  5C3E C;  4A3J C;  4XLP A;  4OIP A;  4QIW L;  1I3Q C;  2YU9 K;  4Y52 C;  4BXX C;  3H0G C;  3GTP K;  1TWC K;  3RZO K;  2A6E A;  3S1R K;  5C44 C;  5IYB C;  4YFK A;  3GTK C;  2JA5 K;  1I6H C;  3CQZ K;  4C3J K;  1HQM A;  5TMF A;  4A3I K;  3H3V L;  4LLG A;  3HOX K;  2PPB A;  4C3I K;  4A3G K;  1SFO K;  3I4N K;  5C3E K;  3GTQ C;  4Y52 K;  2A6H A;  4YFN A;  1TWC C;  4XSX A;  3H0G K;  4Y7N K;  3S1R C;  1IW7 A;  2WB1 L;  3GTM K;  2JA5 C;  4BY7 C;  4BBS C;  3RZD K;  1TWA K;  4C3J C;  2Y0S D;  4MEX A;  4A3C K;  2BE5 A;  3S14 K;  4A3D K;  4C2M K;  4A3B K;  4MEY A;  2WAQ D;  4A3G C;  3S1M K;  2R93 K;  2B63 K;  1TWF K;  4A3L K;  3GTQ K;  4GZY A;  5IYC K;  1R9T C;  4OIN A;  4QJV B;  4YFX A;  4LK1 A;  4Y7N C;  3GTL C;  4G7O A;  1K83 K;  1XPP A;  4QIW D;  3I4M C;  4A3E K;  2E2H K;  2JA7 K;  3WOD A;  2NVT K;  3GTM C;  3RZD C;  4A3C C;  1TWA C;  4AYB L;  4BY7 K;  4BBS K;  1ZYR A;  3S14 C;  4A3D C;  5M5X K;  4C2M C;  4MQ9 A;  4A3B C;  3S1M C;  3HKZ L;  4G7Z A;  2R93 C;  2A69 A;  2B63 C;  2PMZ D;  5M3M K;  4OIR A;  5IYD K;  1TWF C;  5FLM K;  5IYC C;  4G7H A;  2VUM K;  3S17 K;  1K83 C;  4A3L C;  3S1Q C;  1Y1V C;  2PA8 L;  2NVT C;  3K7A C;  4A3E C;  3EQL A;  2E2H C;  2JA7 C;  2NVY K;  3GTL K;  3I4M K;  4OIO A;  4KN4 A;  4QJV A;  4A3F C;  1I6V A;  3FKI K;  4NOI A;  4A3M K;  1SMY A;  1Y1W K;  3S2D K;  3HOY K;  3GTJ C;  4A3K K;  5C4X K;  3S2H K;  3M3Y K;  1TWG K;  5IYD C;  3HOU K;  3GTG K;  5FLM C;  1TWH K;  5D4D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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