3S17C

Rna polymerase ii initiation complex with a 9-nt rna
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s17C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s17C01
3HOUK 1I50C 4QIWD 4G7ZA 3RZOC 4C3IK 4A3FK 4YFKA 4YFXA 4A3BC 2CW0A 4C3IC 5IYBK 4JK1A 4ZH4A 4G7OA 5IYBC 3DXJA 3H3VL 4Y7NC 3S1NK 5IYDK 4LJZA 3HOYK 3S1NC 3GTJK 4C3HK 5IYDC 5C3EK 3H0GK 3HOYC 4KN4A 4KMUA 4C3HC 3GTGC 5C3EC 2JA6K 4BXXK 3H0GC 2PPBA 2R7ZK 4MQ9A 2JA6C 4KN7A 4A3CK 2B63K 3HOWK 4QIWL 2R7ZC 1TWFK 3GTMK 4A3CC 2B63C 3HOWC 4A3EK 1SFOK 1TWFC 3GTMC 1WCMC 3S2HK 4Q4ZA 3S15K 5D4DA 3RZDK 2E2HC 1I6HC 3S2HC 1TWHK 4BBSK 3RZDC 3S14C 3HOVK 3K7AK 1Y1WK 2PMZD 5IYCC 1TWGK 4BBSC 2O5JA 3M3YC 1I3QK 2BE5A 3CQZK 3HOVC 3K7AC 1Y1WC 3HOZK 4A93K 1TWGC 3CQZC 3PO2C 1I3QC 2PA8D 3HOUC 3HOZC 3S16K 1YNJA 3HOXK 4A3FC 1BDFA 2A68A 2WB1D 1Y1VK 3S16C 2YU9K 1K83K 4AYBL 4A3LK 1Y1VC 4A3LC 3GTQK 3GTJC 2O5IA 2R93K 3GTQC 5TMCA 3HKZL 4NOIA 2R93C 4BXXC 2PA8L 1YNNA 1TWAK 1I6VA 3GTOK 4XLNA 5TMFA 4A3GK 1TWAC 4A3EC 4BBRK 2Y0SD 1SFOC 4BY7K 2JA5K 4A3GC 4BBRC 3S15C 4BY7C 2JA5C 1SMYA 1TWHC 4LK1A 4MEYA 4XLPA 4BY1K 5IP7K 3GTLK 2NVTK 2A6EA 3M4OK 4X6AK 3GTLC 4A93C 2NVTC 3M4OC 5FJ8K 3FKIK 3S1MK 3HOXC 2YU9C 3GTKK 3FKIC 1K83C 4YG2A 4OIOA 2NVXK 5IP9K 3I4MK 4GZYA 4QJVA 3GTKC 5M5WK 3S1QK 5IP9C 3I4MC 3H3VD 2E2JK 1R9TK 4G7HA 3S1QC 3GTPK 5C4XK 2E2JC 5M3MK 3S2DK 1R9TC 2PMZL 3I4NK 3GTPC 4A3JK 3S2DC 1IW7A 4XSZA 4YFNA 2E2IK 3S1RK 4OINA 4Q5SA 4LLGA 1I50K 2A6HA 2WAQD 4XSXA 2E2IC 1XPPA 2WB1L 5C44K 3S1RC 4OIRA 3GTOC 4A3BK 4QJVB 3S17K 5C44C 3PO2K 2A69A 4A3MK 4Y7NK 3S17C 2NVQK 3RZOK 4A3KK 4A3MC 2NVQC 4BY1C 4C2MK 5IP7C 4A3KC 2NVYK 4OIQA 3PO3K 3GTGK 1ZYRA 4X6AC 5M3FK 4MEXA 4LK0A 4C2MC 2VUMK 2NVYC 4A3DK 3PO3C 2VUMC 3S1MC 2R92K 4A3DC 2WAQL 5M5XK 4A3IK 4AYBD 2NVXC 2R92C 2JA7K 2Y0SL 1WCMK 4A3IC 2JA7C 5C4JK 3EQLA 4C3JK 2E2HK 1I6HK 2JA8K 3S14K 5C4JC 5C4XC 1TWCK 4C3JC 5FLMK 4Y52K 5IYCK 4OIPA 2JA8C 4A3JC 3I4NC 3HKZD 3M3YK 5FLMC 1TWCC 4Y52C 3WODA 1HQMA 5M5YK
chains in the Genus database with same CATH superfamily
2KQ1A 1R9TA 5IYBK 4A3BC 2CW0A 1FEUA 5IYBC 1DCOA 1WQFA 3SZZA 4AH6A 5IOSA 3S1NK 3A8JA 1C0AA 3HOYK 3S1NC 3GTJK 2V6TA 3HOYC 3GTGC 2JA6K 4G0VA 2R7ZK 1PJ6A 4MQ9A 2JA6C 3HOWK 4QIWL 2R7ZC 1TWFK 3HOWC 4A3EK 1JVIA 1TWFC 1WQHA 2VUMA 1F7UA 4Q4ZA 2E2HC 1HI9A 4KB4A 3K7AK 1Y1WK 1J98A 2BE5A 3K7AC 1Y1WC 1WCMA 3HOUC 4KMAA 3OPFA 4A3FC 1BDFA 1TWCA 1O24A 4BKWA 4GTEA 1ZQ1C 1IS1A 1XXBA 1TWAK 4M1XA 4A3GK 1TWAC 4A3GC 2B63A 1TWHC 4LK1A 3TFHA 1BS2A 5IP7K 2KXYA 3M4OK 3PIPS 3M4OC 4LR2A 5FJ8K 2GSOA 5DM7S 2YU9C 2NVXK 5IP9K 1DD5A 4QJVA 3G4AA 5M5WK 3S1QK 4XCHA 5IP9C 2E2JK 1R9TK 3S1QC 2E2JC 3S2DK 1Y1VA 1R9TC 1K83A 1XZPA 5JVGS 3S2DC 1IW7A 2Y3PA 4WJ4A 4WJ3M 4LLGA 1O2AA 2A6HA 4OIRA 3GTOC 4DDQA 1EQRA 3NUHA 2NVQK 4PAAA 2NVQC 4KATA 3PIOS 4GTAA 1ZYRA 2VUMK 4LK0A 1USOA 4A3DK 2JA5A 2VUMC 2FQTA 4A3DC 1EI6A 3JSTA 4P5AA 3GTLA 2Y0SL 3T02A 1WCMK 4IO9S 2L3UA 1IQ0A 5C4JK 4C3JK 3AD8C 4KB2A 5C4JC 1TWCK 4C3JC 3I4NC 1TWCC 4OIQA 1WIHA 3WODA 4KDDA 2KWAA 4KARA 1O25A 4JK1A 4ZH4A 3DXJA 4KAWX 1EH1A 1XZPB 1VRQC 1I50A 2D6FC 2P5MA 3MMLB 4KMHA 4KMUA 4GTFA 1F93A 4BXXK 1F7VA 1G51A 2ZJPS 2B63K 2B63C 2NVYA 1JQWA 3ADAC 4GTCA 5D4DA 5EGHA 3LAJA 3AD9C 3CAGA 4LOWA 2JA7A 3HOZK 4A93K 3HOZC 3HOXK 3N3YA 1F9NA 2A68A 1Y1VK 5HL7S 1K83K 2JH3A 4A3LK 1Y1VC 4LQYA 3N0BA 4A3LC 1WSRA 4C45A 3GTJC 2O5IA 2RGRA 5TMCA 3HKZL 3LYWA 1J6XA 4PABA 2PA8L 4J3NA 1KQ4A 4XLNA 4A3EC 2Y0SD 4BY7K 2JA5K 1YCLA 2GSNA 4BY7C 2JA5C 3GSIA 4BY1K 4XLPA 3GTMA 3GTLK 2KPUA 4X6AK 1SFOA 3GTLC 5CHPA 1VLOA 3GDZA 3GEIA 4YG2A 3I4MK 4GZYA 1I3QA 1IE0A 3GEEA 1XXCA 3I4MC 5C4XK 4A3JK 5DM6S 2GAHC 3S1RK 2CFAB 1I50K 2WAQD 2WB1L 3RZOK 5C44K 3S1RC 5C44C 1ZXOA 1L0WA 4Y7NK 4KASA 3OEPA 3TFIA 5IP7C 2NVYK 3PO3K 2NVYC 3PO3C 3Q3QA 3AQPA 2NVXC 2JA7K 2JA7C 3BP8C 3EQLA 1I6HK 3FKIA 5EGEA 2JA8K 4O2DA 3S14K 3GTKA 5IYCK 2JA8C 3M3YK 3HKZD 1X31C 3T01A 4QIWD 4G7ZA 1INNA 3GTPA 1J6WA 4YFKA 3H3VL 2E2IA 5IYDK 3L4KA 2RH6A 2W7VA 3G4CA 5IYDC 5C3EK 4P5BA 5IOTA 5C3EC 2PPBA 3SZYA 4A3CK 1O28A 4IOAS 3GTMK 4A3CC 1SFOK 3GTGA 3GTMC 1WCMC 1XZQB 3S15K 1O26A 1YX2A 4BLBA 4BBSK 5JVOA 3HOVK 4BBSC 1I3QK 3HOVC 3BUEA 1I3QC 2V6SA 2E2HA 1YNJA 3QX3A 2WB1D 3AH5A 4AYBL 1DCPA 2L5NA 1J6VA 1DCHA 3L4JA 4WFNS 4BXXC 2P8TA 5L46A 1V5VA 1ZVUA 4G0UA 4GTBA 2ZJQS 3H0GA 2FQOA 1UV7A 4MEYA 4WFAS 4A93C 4GFQA 3FKIK 3S1MK 3N0CA 3HOXC 1TWHA 2CFAA 1JOEA 4GTLA 5E68A 3GTKK 3FKIC 1K83C 1VJEA 1TWGA 3CQZA 3HXAA 3GTKC 3A8IA 3TTGA 3V4GA 3H3VD 4G7HA 3GTPK 5M3MK 2YU9A 2PMZL 3GTPC 4XSZA 2XCOA 2E2IK 3TFJA 1EFWA 3GTQA 4XSXA 2E2IC 1XPPA 3BP3A 5IORA 4A3BK 1BJTA 2R93A 3S17K 2A69A 4A3MK 3S17C 4P9SA 4A3KK 4WFBS 4A3MC 1O2FB 3GTOA 4BY1C 4A3KC 3GTGK 1WOSA 4X6AC 5M3FK 4G0WA 4BLAA 1O29A 3LAPA 1WSVA 5HL8A 5M5XK 4AYBD 3OREA 5TJ3A 4IOCS 1ISEA 2E2HK 5C4XC 5IOQA 4Y52K 2ZJRS 4OIPA 4A3JC 1GE9A 4Y52C 5M5YK 3HOUK 4FZBA 1I50C 3RZOC 4C3IK 4A3FK 4YFXA 4C3IC 3AQOA 4G7OA 1WOPA 4KM9A 4Y7NC 1IL2A 1WOOA 4LJZA 1XZQA 4C3HK 3H0GK 1VH2A 4KN4A 4KM8A 4C3HC 2ZUEA 3H0GC 3A8KA 4KN7A 2GAGC 3GEHA 5JVHS 3DLLS 3S2HK 3RZDK 1BGWA 1I6HC 4KC6A 2R92A 3S2HC 1TWHK 3RZDC 3S14C 2PMZD 5IYCC 1TWGK 2O5JA 3CQZK 3M3YC 3PO2K 3FOEA 4KMDA 1ZBSA 1TWGC 3CQZC 3PO2C 2PA8D 3S16K 3IPJA 5JFEA 2YU9K 3S16C 5HQHA 1RU0A 3S0XA 3GTQK 2V6UA 4WF9S 2R93K 1O2BA 3GTQC 1WQGA 1B4BA 4NOIA 2R93C 1VGXA 3LPXA 1YNNA 1WORA 1I6VA 3GTJA 3GTOK 2XCQA 5TMFA 4BBRK 1SFOC 2JA6A 4BBRC 3S15C 2R7ZA 1SMYA 1TWFA 2NVTK 2A6EA 1USMA 2ZFZA 5CJ9A 2NVTC 1IBAA 3T00A 4OIOA 1Y1WA 4WILA 3AD7C 4RMFA 1PJ7A 3FOFA 1AB4A 3I4NK 4YFNA 1B4AA 4OINA 4Q5SA 1EK8A 1XXAA 4ILDA 3VA7A 4QJVB 4WCES 2PHCB 3GIRA 1O27A 1PJ5A 4U67S 1TWAA 3ERED 4C2MK 2GSUA 4GT9A 4FM9A 4MEXA 4C2MC 3S1MC 2XCRB 2R92K 2WAQL 4A3IK 2R92C 4GTDA 4A3IC 3FHZA 2ZUFA 3CF5S 5FLMK 2EBBA 2NVXA 5FLMC 1HQMA
chains in the Genus database with same CATH topology
3HOUK 1I50C 4QIWD 4G7ZA 3RZOC 4C3IK 4A3FK 4YFKA 4YFXA 4A3BC 2CW0A 4C3IC 5IYBK 4JK1A 4ZH4A 4G7OA 5IYBC 3DXJA 3H3VL 4Y7NC 3S1NK 5IYDK 4LJZA 3HOYK 3S1NC 3GTJK 4C3HK 5IYDC 5C3EK 3H0GK 3HOYC 4KN4A 4KMUA 4C3HC 3GTGC 5C3EC 2JA6K 4BXXK 3H0GC 2PPBA 2R7ZK 4MQ9A 2JA6C 4KN7A 4A3CK 2B63K 3HOWK 4QIWL 2R7ZC 1TWFK 3GTMK 4A3CC 2B63C 3HOWC 4A3EK 1SFOK 1TWFC 3GTMC 1WCMC 3S2HK 4Q4ZA 3S15K 5D4DA 3RZDK 2E2HC 1I6HC 3S2HC 1TWHK 4BBSK 3RZDC 3S14C 3HOVK 3K7AK 1Y1WK 2PMZD 5IYCC 1TWGK 4BBSC 2O5JA 3M3YC 1I3QK 2BE5A 3CQZK 3HOVC 3K7AC 1Y1WC 3HOZK 4A93K 1TWGC 3CQZC 3PO2C 1I3QC 2PA8D 3HOUC 3HOZC 3S16K 1YNJA 3HOXK 4A3FC 1BDFA 2A68A 2WB1D 1Y1VK 3S16C 2YU9K 1K83K 4AYBL 4A3LK 1Y1VC 4A3LC 3GTQK 3GTJC 2O5IA 2R93K 3GTQC 5TMCA 3HKZL 4NOIA 2R93C 4BXXC 2PA8L 1YNNA 1TWAK 1I6VA 3GTOK 4XLNA 5TMFA 4A3GK 1TWAC 4A3EC 4BBRK 2Y0SD 1SFOC 4BY7K 2JA5K 4A3GC 4BBRC 3S15C 4BY7C 2JA5C 1SMYA 1TWHC 4LK1A 4MEYA 4XLPA 4BY1K 5IP7K 3GTLK 2NVTK 2A6EA 3M4OK 4X6AK 3GTLC 4A93C 2NVTC 3M4OC 5FJ8K 3FKIK 3S1MK 3HOXC 2YU9C 3GTKK 3FKIC 1K83C 4YG2A 4OIOA 2NVXK 5IP9K 3I4MK 4GZYA 4QJVA 3GTKC 5M5WK 3S1QK 5IP9C 3I4MC 3H3VD 2E2JK 1R9TK 4G7HA 3S1QC 3GTPK 5C4XK 2E2JC 5M3MK 3S2DK 1R9TC 2PMZL 3I4NK 3GTPC 4A3JK 3S2DC 1IW7A 4XSZA 4YFNA 2E2IK 3S1RK 4OINA 4Q5SA 4LLGA 1I50K 2A6HA 2WAQD 4XSXA 2E2IC 1XPPA 2WB1L 5C44K 3S1RC 4OIRA 3GTOC 4A3BK 4QJVB 3S17K 5C44C 3PO2K 2A69A 4A3MK 4Y7NK 3S17C 2NVQK 3RZOK 4A3KK 4A3MC 2NVQC 4BY1C 4C2MK 5IP7C 4A3KC 2NVYK 4OIQA 3PO3K 3GTGK 1ZYRA 4X6AC 5M3FK 4MEXA 4LK0A 4C2MC 2VUMK 2NVYC 4A3DK 3PO3C 2VUMC 3S1MC 2R92K 4A3DC 2WAQL 5M5XK 4A3IK 4AYBD 2NVXC 2R92C 2JA7K 2Y0SL 1WCMK 4A3IC 2JA7C 5C4JK 3EQLA 4C3JK 2E2HK 1I6HK 2JA8K 3S14K 5C4JC 5C4XC 1TWCK 4C3JC 5FLMK 4Y52K 5IYCK 4OIPA 2JA8C 4A3JC 3I4NC 3HKZD 3M3YK 5FLMC 1TWCC 4Y52C 3WODA 1HQMA 5M5YK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HOU K;  1I50 C;  4QIW D;  4G7Z A;  3RZO C;  4C3I K;  4A3F K;  4YFK A;  4YFX A;  4A3B C;  2CW0 A;  4C3I C;  5IYB K;  4JK1 A;  4ZH4 A;  4G7O A;  5IYB C;  3DXJ A;  3H3V L;  4Y7N C;  3S1N K;  5IYD K;  4LJZ A;  3HOY K;  3S1N C;  3GTJ K;  4C3H K;  5IYD C;  5C3E K;  3H0G K;  3HOY C;  4KN4 A;  4KMU A;  4C3H C;  3GTG C;  5C3E C;  2JA6 K;  4BXX K;  3H0G C;  2PPB A;  2R7Z K;  4MQ9 A;  2JA6 C;  4KN7 A;  4A3C K;  2B63 K;  3HOW K;  4QIW L;  2R7Z C;  1TWF K;  3GTM K;  4A3C C;  2B63 C;  3HOW C;  4A3E K;  1SFO K;  1TWF C;  3GTM C;  1WCM C;  3S2H K;  4Q4Z A;  3S15 K;  5D4D A;  3RZD K;  2E2H C;  1I6H C;  3S2H C;  1TWH K;  4BBS K;  3RZD C;  3S14 C;  3HOV K;  3K7A K;  1Y1W K;  2PMZ D;  5IYC C;  1TWG K;  4BBS C;  2O5J A;  3M3Y C;  1I3Q K;  2BE5 A;  3CQZ K;  3HOV C;  3K7A C;  1Y1W C;  3HOZ K;  4A93 K;  1TWG C;  3CQZ C;  3PO2 C;  1I3Q C;  2PA8 D;  3HOU C;  3HOZ C;  3S16 K;  1YNJ A;  3HOX K;  4A3F C;  1BDF A;  2A68 A;  2WB1 D;  1Y1V K;  3S16 C;  2YU9 K;  1K83 K;  4AYB L;  4A3L K;  1Y1V C;  4A3L C;  3GTQ K;  3GTJ C;  2O5I A;  2R93 K;  3GTQ C;  5TMC A;  3HKZ L;  4NOI A;  2R93 C;  4BXX C;  2PA8 L;  1YNN A;  1TWA K;  1I6V A;  3GTO K;  4XLN A;  5TMF A;  4A3G K;  1TWA C;  4A3E C;  4BBR K;  2Y0S D;  1SFO C;  4BY7 K;  2JA5 K;  4A3G C;  4BBR C;  3S15 C;  4BY7 C;  2JA5 C;  1SMY A;  1TWH C;  4LK1 A;  4MEY A;  4XLP A;  4BY1 K;  5IP7 K;  3GTL K;  2NVT K;  2A6E A;  3M4O K;  4X6A K;  3GTL C;  4A93 C;  2NVT C;  3M4O C;  5FJ8 K;  3FKI K;  3S1M K;  3HOX C;  2YU9 C;  3GTK K;  3FKI C;  1K83 C;  4YG2 A;  4OIO A;  2NVX K;  5IP9 K;  3I4M K;  4GZY A;  4QJV A;  3GTK C;  5M5W K;  3S1Q K;  5IP9 C;  3I4M C;  3H3V D;  2E2J K;  1R9T K;  4G7H A;  3S1Q C;  3GTP K;  5C4X K;  2E2J C;  5M3M K;  3S2D K;  1R9T C;  2PMZ L;  3I4N K;  3GTP C;  4A3J K;  3S2D C;  1IW7 A;  4XSZ A;  4YFN A;  2E2I K;  3S1R K;  4OIN A;  4Q5S A;  4LLG A;  1I50 K;  2A6H A;  2WAQ D;  4XSX A;  2E2I C;  1XPP A;  2WB1 L;  5C44 K;  3S1R C;  4OIR A;  3GTO C;  4A3B K;  4QJV B;  3S17 K;  5C44 C;  3PO2 K;  2A69 A;  4A3M K;  4Y7N K;  3S17 C;  2NVQ K;  3RZO K;  4A3K K;  4A3M C;  2NVQ C;  4BY1 C;  4C2M K;  5IP7 C;  4A3K C;  2NVY K;  4OIQ A;  3PO3 K;  3GTG K;  1ZYR A;  4X6A C;  5M3F K;  4MEX A;  4LK0 A;  4C2M C;  2VUM K;  2NVY C;  4A3D K;  3PO3 C;  2VUM C;  3S1M C;  2R92 K;  4A3D C;  2WAQ L;  5M5X K;  4A3I K;  4AYB D;  2NVX C;  2R92 C;  2JA7 K;  2Y0S L;  1WCM K;  4A3I C;  2JA7 C;  5C4J K;  3EQL A;  4C3J K;  2E2H K;  1I6H K;  2JA8 K;  3S14 K;  5C4J C;  5C4X C;  1TWC K;  4C3J C;  5FLM K;  4Y52 K;  5IYC K;  4OIP A;  2JA8 C;  4A3J C;  3I4N C;  3HKZ D;  3M3Y K;  5FLM C;  1TWC C;  4Y52 C;  3WOD A;  1HQM A;  5M5Y K; 
#chains in the Genus database with same CATH topology
 2KQ1 A;  1R9T A;  5IYB K;  4A3B C;  2CW0 A;  1FEU A;  5IYB C;  1DCO A;  1WQF A;  3SZZ A;  4AH6 A;  5IOS A;  3S1N K;  3A8J A;  1C0A A;  3HOY K;  3S1N C;  3GTJ K;  2V6T A;  3HOY C;  3GTG C;  2JA6 K;  4G0V A;  2R7Z K;  1PJ6 A;  4MQ9 A;  2JA6 C;  3HOW K;  4QIW L;  2R7Z C;  1TWF K;  3HOW C;  4A3E K;  1JVI A;  1TWF C;  1WQH A;  2VUM A;  1F7U A;  4Q4Z A;  2E2H C;  1HI9 A;  4KB4 A;  3K7A K;  1Y1W K;  1J98 A;  2BE5 A;  3K7A C;  1Y1W C;  1WCM A;  3HOU C;  4KMA A;  3OPF A;  4A3F C;  1BDF A;  1TWC A;  1O24 A;  4BKW A;  4GTE A;  1ZQ1 C;  1IS1 A;  1XXB A;  1TWA K;  4M1X A;  4A3G K;  1TWA C;  4A3G C;  2B63 A;  1TWH C;  4LK1 A;  3TFH A;  1BS2 A;  5IP7 K;  2KXY A;  3M4O K;  3PIP S;  3M4O C;  4LR2 A;  5FJ8 K;  2GSO A;  5DM7 S;  2YU9 C;  2NVX K;  5IP9 K;  1DD5 A;  4QJV A;  3G4A A;  5M5W K;  3S1Q K;  4XCH A;  5IP9 C;  2E2J K;  1R9T K;  3S1Q C;  2E2J C;  3S2D K;  1Y1V A;  1R9T C;  1K83 A;  1XZP A;  5JVG S;  3S2D C;  1IW7 A;  2Y3P A;  4WJ4 A;  4WJ3 M;  4LLG A;  1O2A A;  2A6H A;  4OIR A;  3GTO C;  4DDQ A;  1EQR A;  3NUH A;  2NVQ K;  4PAA A;  2NVQ C;  4KAT A;  3PIO S;  4GTA A;  1ZYR A;  2VUM K;  4LK0 A;  1USO A;  4A3D K;  2JA5 A;  2VUM C;  2FQT A;  4A3D C;  1EI6 A;  3JST A;  4P5A A;  3GTL A;  2Y0S L;  3T02 A;  1WCM K;  4IO9 S;  2L3U A;  1IQ0 A;  5C4J K;  4C3J K;  3AD8 C;  4KB2 A;  5C4J C;  1TWC K;  4C3J C;  3I4N C;  1TWC C;  4OIQ A;  1WIH A;  3WOD A;  4KDD A;  2KWA A;  4KAR A;  1O25 A;  4JK1 A;  4ZH4 A;  3DXJ A;  4KAW X;  1EH1 A;  1XZP B;  1VRQ C;  1I50 A;  2D6F C;  2P5M A;  3MML B;  4KMH A;  4KMU A;  4GTF A;  1F93 A;  4BXX K;  1F7V A;  1G51 A;  2ZJP S;  2B63 K;  2B63 C;  2NVY A;  1JQW A;  3ADA C;  4GTC A;  5D4D A;  5EGH A;  3LAJ A;  3AD9 C;  3CAG A;  4LOW A;  2JA7 A;  3HOZ K;  4A93 K;  3HOZ C;  3HOX K;  3N3Y A;  1F9N A;  2A68 A;  1Y1V K;  5HL7 S;  1K83 K;  2JH3 A;  4A3L K;  1Y1V C;  4LQY A;  3N0B A;  4A3L C;  1WSR A;  4C45 A;  3GTJ C;  2O5I A;  2RGR A;  5TMC A;  3HKZ L;  3LYW A;  1J6X A;  4PAB A;  2PA8 L;  4J3N A;  1KQ4 A;  4XLN A;  4A3E C;  2Y0S D;  4BY7 K;  2JA5 K;  1YCL A;  2GSN A;  4BY7 C;  2JA5 C;  3GSI A;  4BY1 K;  4XLP A;  3GTM A;  3GTL K;  2KPU A;  4X6A K;  1SFO A;  3GTL C;  5CHP A;  1VLO A;  3GDZ A;  3GEI A;  4YG2 A;  3I4M K;  4GZY A;  1I3Q A;  1IE0 A;  3GEE A;  1XXC A;  3I4M C;  5C4X K;  4A3J K;  5DM6 S;  2GAH C;  3S1R K;  2CFA B;  1I50 K;  2WAQ D;  2WB1 L;  3RZO K;  5C44 K;  3S1R C;  5C44 C;  1ZXO A;  1L0W A;  4Y7N K;  4KAS A;  3OEP A;  3TFI A;  5IP7 C;  2NVY K;  3PO3 K;  2NVY C;  3PO3 C;  3Q3Q A;  3AQP A;  2NVX C;  2JA7 K;  2JA7 C;  3BP8 C;  3EQL A;  1I6H K;  3FKI A;  5EGE A;  2JA8 K;  4O2D A;  3S14 K;  3GTK A;  5IYC K;  2JA8 C;  3M3Y K;  3HKZ D;  1X31 C;  3T01 A;  4QIW D;  4G7Z A;  1INN A;  3GTP A;  1J6W A;  4YFK A;  3H3V L;  2E2I A;  5IYD K;  3L4K A;  2RH6 A;  2W7V A;  3G4C A;  5IYD C;  5C3E K;  4P5B A;  5IOT A;  5C3E C;  2PPB A;  3SZY A;  4A3C K;  1O28 A;  4IOA S;  3GTM K;  4A3C C;  1SFO K;  3GTG A;  3GTM C;  1WCM C;  1XZQ B;  3S15 K;  1O26 A;  1YX2 A;  4BLB A;  4BBS K;  5JVO A;  3HOV K;  4BBS C;  1I3Q K;  3HOV C;  3BUE A;  1I3Q C;  2V6S A;  2E2H A;  1YNJ A;  3QX3 A;  2WB1 D;  3AH5 A;  4AYB L;  1DCP A;  2L5N A;  1J6V A;  1DCH A;  3L4J A;  4WFN S;  4BXX C;  2P8T A;  5L46 A;  1V5V A;  1ZVU A;  4G0U A;  4GTB A;  2ZJQ S;  3H0G A;  2FQO A;  1UV7 A;  4MEY A;  4WFA S;  4A93 C;  4GFQ A;  3FKI K;  3S1M K;  3N0C A;  3HOX C;  1TWH A;  2CFA A;  1JOE A;  4GTL A;  5E68 A;  3GTK K;  3FKI C;  1K83 C;  1VJE A;  1TWG A;  3CQZ A;  3HXA A;  3GTK C;  3A8I A;  3TTG A;  3V4G A;  3H3V D;  4G7H A;  3GTP K;  5M3M K;  2YU9 A;  2PMZ L;  3GTP C;  4XSZ A;  2XCO A;  2E2I K;  3TFJ A;  1EFW A;  3GTQ A;  4XSX A;  2E2I C;  1XPP A;  3BP3 A;  5IOR A;  4A3B K;  1BJT A;  2R93 A;  3S17 K;  2A69 A;  4A3M K;  3S17 C;  4P9S A;  4A3K K;  4WFB S;  4A3M C;  1O2F B;  3GTO A;  4BY1 C;  4A3K C;  3GTG K;  1WOS A;  4X6A C;  5M3F K;  4G0W A;  4BLA A;  1O29 A;  3LAP A;  1WSV A;  5HL8 A;  5M5X K;  4AYB D;  3ORE A;  5TJ3 A;  4IOC S;  1ISE A;  2E2H K;  5C4X C;  5IOQ A;  4Y52 K;  2ZJR S;  4OIP A;  4A3J C;  1GE9 A;  4Y52 C;  5M5Y K;  3HOU K;  4FZB A;  1I50 C;  3RZO C;  4C3I K;  4A3F K;  4YFX A;  4C3I C;  3AQO A;  4G7O A;  1WOP A;  4KM9 A;  4Y7N C;  1IL2 A;  1WOO A;  4LJZ A;  1XZQ A;  4C3H K;  3H0G K;  1VH2 A;  4KN4 A;  4KM8 A;  4C3H C;  2ZUE A;  3H0G C;  3A8K A;  4KN7 A;  2GAG C;  3GEH A;  5JVH S;  3DLL S;  3S2H K;  3RZD K;  1BGW A;  1I6H C;  4KC6 A;  2R92 A;  3S2H C;  1TWH K;  3RZD C;  3S14 C;  2PMZ D;  5IYC C;  1TWG K;  2O5J A;  3CQZ K;  3M3Y C;  3PO2 K;  3FOE A;  4KMD A;  1ZBS A;  1TWG C;  3CQZ C;  3PO2 C;  2PA8 D;  3S16 K;  3IPJ A;  5JFE A;  2YU9 K;  3S16 C;  5HQH A;  1RU0 A;  3S0X A;  3GTQ K;  2V6U A;  4WF9 S;  2R93 K;  1O2B A;  3GTQ C;  1WQG A;  1B4B A;  4NOI A;  2R93 C;  1VGX A;  3LPX A;  1YNN A;  1WOR A;  1I6V A;  3GTJ A;  3GTO K;  2XCQ A;  5TMF A;  4BBR K;  1SFO C;  2JA6 A;  4BBR C;  3S15 C;  2R7Z A;  1SMY A;  1TWF A;  2NVT K;  2A6E A;  1USM A;  2ZFZ A;  5CJ9 A;  2NVT C;  1IBA A;  3T00 A;  4OIO A;  1Y1W A;  4WIL A;  3AD7 C;  4RMF A;  1PJ7 A;  3FOF A;  1AB4 A;  3I4N K;  4YFN A;  1B4A A;  4OIN A;  4Q5S A;  1EK8 A;  1XXA A;  4ILD A;  3VA7 A;  4QJV B;  4WCE S;  2PHC B;  3GIR A;  1O27 A;  1PJ5 A;  4U67 S;  1TWA A;  3ERE D;  4C2M K;  2GSU A;  4GT9 A;  4FM9 A;  4MEX A;  4C2M C;  3S1M C;  2XCR B;  2R92 K;  2WAQ L;  4A3I K;  2R92 C;  4GTD A;  4A3I C;  3FHZ A;  2ZUF A;  3CF5 S;  5FLM K;  2EBB A;  2NVX A;  5FLM C;  1HQM A; 
#chains in the Genus database with same CATH homology
 3HOU K;  1I50 C;  4QIW D;  4G7Z A;  3RZO C;  4C3I K;  4A3F K;  4YFK A;  4YFX A;  4A3B C;  2CW0 A;  4C3I C;  5IYB K;  4JK1 A;  4ZH4 A;  4G7O A;  5IYB C;  3DXJ A;  3H3V L;  4Y7N C;  3S1N K;  5IYD K;  4LJZ A;  3HOY K;  3S1N C;  3GTJ K;  4C3H K;  5IYD C;  5C3E K;  3H0G K;  3HOY C;  4KN4 A;  4KMU A;  4C3H C;  3GTG C;  5C3E C;  2JA6 K;  4BXX K;  3H0G C;  2PPB A;  2R7Z K;  4MQ9 A;  2JA6 C;  4KN7 A;  4A3C K;  2B63 K;  3HOW K;  4QIW L;  2R7Z C;  1TWF K;  3GTM K;  4A3C C;  2B63 C;  3HOW C;  4A3E K;  1SFO K;  1TWF C;  3GTM C;  1WCM C;  3S2H K;  4Q4Z A;  3S15 K;  5D4D A;  3RZD K;  2E2H C;  1I6H C;  3S2H C;  1TWH K;  4BBS K;  3RZD C;  3S14 C;  3HOV K;  3K7A K;  1Y1W K;  2PMZ D;  5IYC C;  1TWG K;  4BBS C;  2O5J A;  3M3Y C;  1I3Q K;  2BE5 A;  3CQZ K;  3HOV C;  3K7A C;  1Y1W C;  3HOZ K;  4A93 K;  1TWG C;  3CQZ C;  3PO2 C;  1I3Q C;  2PA8 D;  3HOU C;  3HOZ C;  3S16 K;  1YNJ A;  3HOX K;  4A3F C;  1BDF A;  2A68 A;  2WB1 D;  1Y1V K;  3S16 C;  2YU9 K;  1K83 K;  4AYB L;  4A3L K;  1Y1V C;  4A3L C;  3GTQ K;  3GTJ C;  2O5I A;  2R93 K;  3GTQ C;  5TMC A;  3HKZ L;  4NOI A;  2R93 C;  4BXX C;  2PA8 L;  1YNN A;  1TWA K;  1I6V A;  3GTO K;  4XLN A;  5TMF A;  4A3G K;  1TWA C;  4A3E C;  4BBR K;  2Y0S D;  1SFO C;  4BY7 K;  2JA5 K;  4A3G C;  4BBR C;  3S15 C;  4BY7 C;  2JA5 C;  1SMY A;  1TWH C;  4LK1 A;  4MEY A;  4XLP A;  4BY1 K;  5IP7 K;  3GTL K;  2NVT K;  2A6E A;  3M4O K;  4X6A K;  3GTL C;  4A93 C;  2NVT C;  3M4O C;  5FJ8 K;  3FKI K;  3S1M K;  3HOX C;  2YU9 C;  3GTK K;  3FKI C;  1K83 C;  4YG2 A;  4OIO A;  2NVX K;  5IP9 K;  3I4M K;  4GZY A;  4QJV A;  3GTK C;  5M5W K;  3S1Q K;  5IP9 C;  3I4M C;  3H3V D;  2E2J K;  1R9T K;  4G7H A;  3S1Q C;  3GTP K;  5C4X K;  2E2J C;  5M3M K;  3S2D K;  1R9T C;  2PMZ L;  3I4N K;  3GTP C;  4A3J K;  3S2D C;  1IW7 A;  4XSZ A;  4YFN A;  2E2I K;  3S1R K;  4OIN A;  4Q5S A;  4LLG A;  1I50 K;  2A6H A;  2WAQ D;  4XSX A;  2E2I C;  1XPP A;  2WB1 L;  5C44 K;  3S1R C;  4OIR A;  3GTO C;  4A3B K;  4QJV B;  3S17 K;  5C44 C;  3PO2 K;  2A69 A;  4A3M K;  4Y7N K;  3S17 C;  2NVQ K;  3RZO K;  4A3K K;  4A3M C;  2NVQ C;  4BY1 C;  4C2M K;  5IP7 C;  4A3K C;  2NVY K;  4OIQ A;  3PO3 K;  3GTG K;  1ZYR A;  4X6A C;  5M3F K;  4MEX A;  4LK0 A;  4C2M C;  2VUM K;  2NVY C;  4A3D K;  3PO3 C;  2VUM C;  3S1M C;  2R92 K;  4A3D C;  2WAQ L;  5M5X K;  4A3I K;  4AYB D;  2NVX C;  2R92 C;  2JA7 K;  2Y0S L;  1WCM K;  4A3I C;  2JA7 C;  5C4J K;  3EQL A;  4C3J K;  2E2H K;  1I6H K;  2JA8 K;  3S14 K;  5C4J C;  5C4X C;  1TWC K;  4C3J C;  5FLM K;  4Y52 K;  5IYC K;  4OIP A;  2JA8 C;  4A3J C;  3I4N C;  3HKZ D;  3M3Y K;  5FLM C;  1TWC C;  4Y52 C;  3WOD A;  1HQM A;  5M5Y K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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