3S17C

Rna polymerase ii initiation complex with a 9-nt rna
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s17C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s17C01
4BBRC 3HKZL 2WB1D 5C4JK 4BBSK 1WCMC 4JK1A 4A3KC 4YFKA 3RZDK 2PMZL 2NVQC 3HOYK 2PA8D 3GTOK 5C44K 2R93K 4NOIA 1TWGC 2JA8C 3HOZC 3M3YC 3M4OC 1TWHC 5IYBC 3HOXC 3GTQK 3S17K 4A3LK 1YNNA 2A6EA 4A3BK 2R7ZK 1I3QC 1K83C 1SFOK 2WAQD 4MEYA 4A3CK 4C2MK 5IP9C 2R92K 3HKZD 3S1MK 4Y7NC 1SMYA 1I50C 4G7OA 4BBRK 3HOUC 4MQ9A 1WCMK 2PMZD 4A3KK 3K7AC 5C3EC 3PO2C 2NVQK 3WODA 3GTLC 3M3YK 4A3MC 1YNJA 1TWGK 3HOZK 4XSXA 1TWHK 5IYBK 3HOXK 3M4OK 3GTGC 3S2DC 3GTKC 1I3QK 1K83K 4OIOA 5IP7C 3S1QC 1TWCC 3CQZK 5IP9K 4AYBL 3FKIC 3H0GC 2JA5C 4Y7NK 1I50K 5M3FK 4QJVA 3HOUK 1Y1WC 1HQMA 1TWAC 2B63C 1XPPA 3K7AK 3S2HC 5C3EK 3PO2K 3GTLK 3S1NC 4YFNA 4BXXC 2Y0SL 4A3MK 2JA6C 4KMUA 3GTGK 4C3HC 3GTKK 4AYBD 3S1QK 5IP7K 1TWCK 5C4XC 1TWFC 2A6HA 3FKIK 3H0GK 2JA5K 4A3GC 4G7HA 4BY7C 3GTJC 1TWAK 1Y1WK 2B63K 3I4NC 3S2HK 2Y0SD 2JA8K 3S1NK 4Y52K 4BXXK 2PPBA 4LK0A 1Y1VC 2JA6K 4BY1C 4C3HK 2VUMC 3PO3C 3HOVC 5C4XK 1TWFK 5FJ8K 3GTMC 4A3IC 3S1RC 3I4MC 4A3GK 4Q5SA 3EQLA 3S15C 3GTJK 4A3DC 3I4NK 4XLNA 2NVTC 4A93C 4GZYA 4YG2A 4C3IC 4YFXA 5M5YK 1Y1VK 3DXJA 2E2HC 2YU9C 3S2DK 3RZDC 1IW7A 4A3EC 4OINA 4X6AC 4QJVB 4BY1K 2VUMK 4OIPA 3GTPC 3PO3K 3HOVK 2A69A 4C3JC 3GTMK 4A3IK 4A3JC 5M5WK 3S1RK 2NVYC 3HOWC 4KN7A 1I6HC 2WAQL 5M3MK 3S14C 3S15K 5IYDC 4A3DK 2NVTK 4A93K 2CW0A 5FLMC 2JA7C 4XLPA 4C3IK 2E2JC 2O5JA 2YU9K 2E2HK 3RZOC 4LK1A 4A3EK 4A3FC 1R9TC 4QIWD 4X6AK 2BE5A 4XSZA 3GTPK 4OIQA 5IYCC 3H3VD 4C3JK 2NVXC 4A3JK 5TMCA 2E2IC 3S16C 2NVYK 4BY7K 3HOWK 1I6HK 3S14K 3CQZC 4G7ZA 5IYDK 5D4DA 1I6VA 5C4JC 4BBSC 2JA7K 1ZYRA 2A68A 4KN4A 5FLMK 4Q4ZA 2WB1L 1BDFA 5M5XK 2E2JK 4MEXA 2O5IA 3RZOK 3HOYC 3GTOC 2R93C 5C44C 4A3FK 1R9TK 4QIWL 4LJZA 4OIRA 4LLGA 4Y52C 3S17C 3GTQC 4A3BC 4A3LC 2PA8L 4ZH4A 5IYCK 3H3VL 3I4MK 2NVXK 2R7ZC 1SFOC 3S16K 4A3CC 2E2IK 4C2MC 5TMFA 2R92C 3S1MC
chains in the Genus database with same CATH superfamily
4BBSK 2WB1D 4GTLA 1ZBSA 1IL2A 2R93K 3M3YC 1TWGC 3HOZC 1HI9A 4Y52K 1J98A 4A3BK 1YNNA 1K83C 1SFOK 2RH6A 1O29A 5IP9C 1ZXOA 3HKZD 4GTDA 4BBRK 1I50C 4FZBA 2PMZD 1BGWA 1WSRA 5C3EC 3WODA 3GTLC 2XCOA 4WCES 1TWHK 3FKIA 3HOXK 3GTMA 4KMDA 3NUHA 4OIOA 3S1QC 1YCLA 2B63A 1VH2A 3AD8C 2JA5C 1V5VA 4Y7NK 4QJVA 3HOUK 1HQMA 1TWAC 5IOTA 2E2HA 3K7AK 3JSTA 3OREA 3S2HC 3PO2K 3S1NC 4O2DA 2GAHC 4YFNA 4FM9A 5HL7S 2NVYA 3LYWA 3FKIK 3BUEA 4C45A 2JA7A 5IOSA 1Y1WK 5JVHS 2B63K 1VRQC 3PIOS 2JA6K 3PIPS 2P8TA 1WOPA 2Y3PA 1TWFK 1WORA 3GTMC 2D6FC 4KM9A 3EQLA 3S15C 3Q3QA 5DM6S 3GTOA 4GZYA 1O28A 1DCPA 4GTAA 3GIRA 2E2HC 2ZJPS 3S2DK 4A3EC 4X6AC 4QJVB 2VUMK 3HOVK 2A69A 4WFNS 2R92A 4G0UA 5M5WK 1WOSA 2NVYC 1WCMA 2JA7C 5FLMC 3L4KA 4XLPA 4C3IK 2YU9K 4RMFA 3CQZA 5IYCC 1B4BA 4PABA 4C3JK 2EBBA 5JVOA 1PJ5A 3S16C 1I6HK 2V6TA 2L5NA 2P5MA 1F7UA 3GEHA 2E2JK 3RZOK 3GTGA 3GTOC 4A3FK 1R9TK 3S17C 3FOFA 4A3LC 3H0GA 2ZUEA 3I4MK 3AD9C 2KXYA 1WIHA 2R92C 2WAQL 4KARA 3S1MC 2L3UA 1WCMC 4JK1A 3RZDK 2NVQC 3HOYK 2PA8D 4NOIA 3M4OC 2A6EA 3FHZA 5DM7S 2W7VA 3N3YA 1SMYA 4G7OA 1O25A 1F9NA 4MQ9A 1Y1VA 5HL8A 1YX2A 3M3YK 4A3MC 1TWGK 3HOZK 3DLLS 1O2AA 3GEEA 1XXAA 3GTGC 1K83K 1VLOA 5TJ3A 5IP9K 3GEIA 3H0GC 1I50K 1ZQ1C 3N0CA 1XPPA 5C3EK 2XCRB 3GTLK 4U67S 4BXXC 2Y0SL 4WFBS 4C3HC 3S1QK 5C4XC 3MMLB 2A6HA 2JA5K 4A3GC 1ISEA 2KPUA 1J6XA 1TWAK 2GAGC 3I4NC 3S2HK 2JA8K 3S1NK 1DD5A 4IOAS 2PPBA 1Y1VC 4GFQA 5L46A 2FQOA 2NVXA 2E2IA 4A3IC 3S1RC 4GTBA 3N0BA 3T02A 4KC6A 4XLNA 4YG2A 4YFXA 3GTQA 2R7ZA 4LQYA 4OINA 3A8JA 1USOA 3IPJA 3T00A 2FQTA 1G51A 3GTMK 3S15K 5IYDC 3SZYA 2CW0A 1PJ6A 1IS1A 1JOEA 2O5JA 2E2HK 1FEUA 4LK1A 4A3EK 1I3QA 4X6AK 3H3VD 3AQOA 2NVXC 3TFIA 2E2IC 2NVYK 3CAGA 4BY7K 1KQ4A 4G0WA 4IO9S 5D4DA 1I6VA 5C4JC 2JA7K 5FLMK 3A8IA 3AH5A 3OPFA 1BDFA 4WILA 4MEXA 2O5IA 5CHPA 2ZUFA 3GTKA 5C44C 4LJZA 4OIRA 1EK8A 3GTQC 1TWCA 4KATA 5IYCK 3H3VL 1IE0A 2R7ZC 4GTCA 3S16K 4A3CC 3LPXA 4C2MC 5IOQA 4ILDA 4KASA 4A3KC 1B4AA 3S0XA 3GTOK 3S17K 5IYBC 3ADAC 4A3LK 5JFEA 4P5AA 1I3QC 4IOCS 2WAQD 4MEYA 1USMA 3GTJA 2R92K 3S1MK 4KB2A 1WCMK 4AH6A 2NVQK 5EGHA 3OEPA 1YNJA 4XSXA 1O2BA 3M4OK 3BP3A 2KWAA 3S2DC 3GTKC 5IP7C 3CQZK 1TWCC 4KM8A 4AYBL 2V6SA 1O26A 4WJ4A 4A3MK 1EH1A 3GTPA 4LR2A 1WOOA 3GTGK 3CF5S 4P9SA 3H0GK 3GSIA 4G7HA 3GTJC 2PHCB 5CJ9A 2V6UA 5HQHA 3FOEA 2Y0SD 2ZJRS 1JQWA 4BXXK 2GSNA 4BY1C 4C3HK 3PO3C 1X31C 4WJ3M 1VGXA 1XZQB 5C4XK 4GTEA 3I4MC 4A3GK 4Q5SA 1O27A 3SZZA 3VA7A 2JH3A 4A3DC 3L4JA 2XCQA 3I4NK 2NVTC 4A93C 2R93A 1UV7A 5M5YK 1O2FB 1Y1VK 3DXJA 1C0AA 3RZDC 1J6VA 1SFOA 3GTPC 5IORA 3V4GA 4A3IK 4A3JC 2KQ1A 3S1RK 3TFHA 3HOWC 5M3MK 4DDQA 3S14C 1TWHA 1F93A 1XZPA 2BE5A 4XSZA 4KMHA 4XCHA 4WFAS 4P5BA 3HXAA 5TMCA 1VJEA 4G7ZA 5IYDK 4BBSC 1ZYRA 3AQPA 4Q4ZA 2WB1L 5M5XK 2R93C 1DCOA 4LLGA 4Y52C 4A3BC 1IBAA 2NVXK 1SFOC 1PJ7A 4GTFA 2E2IK 1Y1WA 1J6WA 4BBRC 3HKZL 5C4JK 2JA6A 4YFKA 1GE9A 3AD7C 2PMZL 1JVIA 5C44K 2JA8C 3QX3A 2CFAB 1TWHC 3GTQK 3HOXC 1TWFA 2R7ZK 1WQGA 4G0VA 4A3CK 4M1XA 2RGRA 4C2MK 4Y7NC 1XZPB 1EI6A 5E68A 3HOUC 4KB4A 4A3KK 3K7AC 3PO2C 2VUMA 1XXBA 5IYBK 2ZJQS 3GDZA 1I3QK 1IQ0A 3TFJA 3FKIC 5M3FK 1ZVUA 1Y1WC 2YU9A 2B63C 2JA6C 4GT9A 4KAWX 3G4AA 4KMUA 4BLBA 1BJTA 3GTKK 4AYBD 5IP7K 1TWCK 1TWFC 4BY7C 1XZQA 1R9TA 4PAAA 4LK0A 3BP8C 4J3NA 2VUMC 1WSVA 3HOVC 5FJ8K 4KDDA 3GTJK 2GSOA 4C3IC 2YU9C 3G4CA 5EGEA 1IW7A 4BY1K 4OIPA 3PO3K 2GSUA 3A8KA 4KMAA 4BLAA 4C3JC 4BKWA 4KN7A 1I6HC 3LAJA 4A3DK 1XXCA 2NVTK 4A93K 1RU0A 1TWGA 2E2JC 3RZOC 1WQFA 4A3FC 1R9TC 4QIWD 1L0WA 1K83A 3GTPK 4OIQA 3T01A 4A3JK 1I50A 1DCHA 3HOWK 3S14K 3CQZC 1EFWA 3GTLA 2A68A 4KN4A 4WF9S 1EQRA 3LAPA 1INNA 1F7VA 1BS2A 3ERED 3HOYC 1AB4A 4QIWL 2PA8L 4ZH4A 2JA5A 1WQHA 2ZFZA 2CFAA 5TMFA 1TWAA 4LOWA 1O24A 3TTGA 5JVGS
chains in the Genus database with same CATH topology
4BBRC 3HKZL 2WB1D 5C4JK 4BBSK 1WCMC 4JK1A 4A3KC 4YFKA 3RZDK 2PMZL 2NVQC 3HOYK 2PA8D 3GTOK 5C44K 2R93K 4NOIA 1TWGC 2JA8C 3HOZC 3M3YC 3M4OC 1TWHC 5IYBC 3HOXC 3GTQK 3S17K 4A3LK 1YNNA 2A6EA 4A3BK 2R7ZK 1I3QC 1K83C 1SFOK 2WAQD 4MEYA 4A3CK 4C2MK 5IP9C 2R92K 3HKZD 3S1MK 4Y7NC 1SMYA 1I50C 4G7OA 4BBRK 3HOUC 4MQ9A 1WCMK 2PMZD 4A3KK 3K7AC 5C3EC 3PO2C 2NVQK 3WODA 3GTLC 3M3YK 4A3MC 1YNJA 1TWGK 3HOZK 4XSXA 1TWHK 5IYBK 3HOXK 3M4OK 3GTGC 3S2DC 3GTKC 1I3QK 1K83K 4OIOA 5IP7C 3S1QC 1TWCC 3CQZK 5IP9K 4AYBL 3FKIC 3H0GC 2JA5C 4Y7NK 1I50K 5M3FK 4QJVA 3HOUK 1Y1WC 1HQMA 1TWAC 2B63C 1XPPA 3K7AK 3S2HC 5C3EK 3PO2K 3GTLK 3S1NC 4YFNA 4BXXC 2Y0SL 4A3MK 2JA6C 4KMUA 3GTGK 4C3HC 3GTKK 4AYBD 3S1QK 5IP7K 1TWCK 5C4XC 1TWFC 2A6HA 3FKIK 3H0GK 2JA5K 4A3GC 4G7HA 4BY7C 3GTJC 1TWAK 1Y1WK 2B63K 3I4NC 3S2HK 2Y0SD 2JA8K 3S1NK 4Y52K 4BXXK 2PPBA 4LK0A 1Y1VC 2JA6K 4BY1C 4C3HK 2VUMC 3PO3C 3HOVC 5C4XK 1TWFK 5FJ8K 3GTMC 4A3IC 3S1RC 3I4MC 4A3GK 4Q5SA 3EQLA 3S15C 3GTJK 4A3DC 3I4NK 4XLNA 2NVTC 4A93C 4GZYA 4YG2A 4C3IC 4YFXA 5M5YK 1Y1VK 3DXJA 2E2HC 2YU9C 3S2DK 3RZDC 1IW7A 4A3EC 4OINA 4X6AC 4QJVB 4BY1K 2VUMK 4OIPA 3GTPC 3PO3K 3HOVK 2A69A 4C3JC 3GTMK 4A3IK 4A3JC 5M5WK 3S1RK 2NVYC 3HOWC 4KN7A 1I6HC 2WAQL 5M3MK 3S14C 3S15K 5IYDC 4A3DK 2NVTK 4A93K 2CW0A 5FLMC 2JA7C 4XLPA 4C3IK 2E2JC 2O5JA 2YU9K 2E2HK 3RZOC 4LK1A 4A3EK 4A3FC 1R9TC 4QIWD 4X6AK 2BE5A 4XSZA 3GTPK 4OIQA 5IYCC 3H3VD 4C3JK 2NVXC 4A3JK 5TMCA 2E2IC 3S16C 2NVYK 4BY7K 3HOWK 1I6HK 3S14K 3CQZC 4G7ZA 5IYDK 5D4DA 1I6VA 5C4JC 4BBSC 2JA7K 1ZYRA 2A68A 4KN4A 5FLMK 4Q4ZA 2WB1L 1BDFA 5M5XK 2E2JK 4MEXA 2O5IA 3RZOK 3HOYC 3GTOC 2R93C 5C44C 4A3FK 1R9TK 4QIWL 4LJZA 4OIRA 4LLGA 4Y52C 3S17C 3GTQC 4A3BC 4A3LC 2PA8L 4ZH4A 5IYCK 3H3VL 3I4MK 2NVXK 2R7ZC 1SFOC 3S16K 4A3CC 2E2IK 4C2MC 5TMFA 2R92C 3S1MC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBR C;  3HKZ L;  2WB1 D;  5C4J K;  4BBS K;  1WCM C;  4JK1 A;  4A3K C;  4YFK A;  3RZD K;  2PMZ L;  2NVQ C;  3HOY K;  2PA8 D;  3GTO K;  5C44 K;  2R93 K;  4NOI A;  1TWG C;  2JA8 C;  3HOZ C;  3M3Y C;  3M4O C;  1TWH C;  5IYB C;  3HOX C;  3GTQ K;  3S17 K;  4A3L K;  1YNN A;  2A6E A;  4A3B K;  2R7Z K;  1I3Q C;  1K83 C;  1SFO K;  2WAQ D;  4MEY A;  4A3C K;  4C2M K;  5IP9 C;  2R92 K;  3HKZ D;  3S1M K;  4Y7N C;  1SMY A;  1I50 C;  4G7O A;  4BBR K;  3HOU C;  4MQ9 A;  1WCM K;  2PMZ D;  4A3K K;  3K7A C;  5C3E C;  3PO2 C;  2NVQ K;  3WOD A;  3GTL C;  3M3Y K;  4A3M C;  1YNJ A;  1TWG K;  3HOZ K;  4XSX A;  1TWH K;  5IYB K;  3HOX K;  3M4O K;  3GTG C;  3S2D C;  3GTK C;  1I3Q K;  1K83 K;  4OIO A;  5IP7 C;  3S1Q C;  1TWC C;  3CQZ K;  5IP9 K;  4AYB L;  3FKI C;  3H0G C;  2JA5 C;  4Y7N K;  1I50 K;  5M3F K;  4QJV A;  3HOU K;  1Y1W C;  1HQM A;  1TWA C;  2B63 C;  1XPP A;  3K7A K;  3S2H C;  5C3E K;  3PO2 K;  3GTL K;  3S1N C;  4YFN A;  4BXX C;  2Y0S L;  4A3M K;  2JA6 C;  4KMU A;  3GTG K;  4C3H C;  3GTK K;  4AYB D;  3S1Q K;  5IP7 K;  1TWC K;  5C4X C;  1TWF C;  2A6H A;  3FKI K;  3H0G K;  2JA5 K;  4A3G C;  4G7H A;  4BY7 C;  3GTJ C;  1TWA K;  1Y1W K;  2B63 K;  3I4N C;  3S2H K;  2Y0S D;  2JA8 K;  3S1N K;  4Y52 K;  4BXX K;  2PPB A;  4LK0 A;  1Y1V C;  2JA6 K;  4BY1 C;  4C3H K;  2VUM C;  3PO3 C;  3HOV C;  5C4X K;  1TWF K;  5FJ8 K;  3GTM C;  4A3I C;  3S1R C;  3I4M C;  4A3G K;  4Q5S A;  3EQL A;  3S15 C;  3GTJ K;  4A3D C;  3I4N K;  4XLN A;  2NVT C;  4A93 C;  4GZY A;  4YG2 A;  4C3I C;  4YFX A;  5M5Y K;  1Y1V K;  3DXJ A;  2E2H C;  2YU9 C;  3S2D K;  3RZD C;  1IW7 A;  4A3E C;  4OIN A;  4X6A C;  4QJV B;  4BY1 K;  2VUM K;  4OIP A;  3GTP C;  3PO3 K;  3HOV K;  2A69 A;  4C3J C;  3GTM K;  4A3I K;  4A3J C;  5M5W K;  3S1R K;  2NVY C;  3HOW C;  4KN7 A;  1I6H C;  2WAQ L;  5M3M K;  3S14 C;  3S15 K;  5IYD C;  4A3D K;  2NVT K;  4A93 K;  2CW0 A;  5FLM C;  2JA7 C;  4XLP A;  4C3I K;  2E2J C;  2O5J A;  2YU9 K;  2E2H K;  3RZO C;  4LK1 A;  4A3E K;  4A3F C;  1R9T C;  4QIW D;  4X6A K;  2BE5 A;  4XSZ A;  3GTP K;  4OIQ A;  5IYC C;  3H3V D;  4C3J K;  2NVX C;  4A3J K;  5TMC A;  2E2I C;  3S16 C;  2NVY K;  4BY7 K;  3HOW K;  1I6H K;  3S14 K;  3CQZ C;  4G7Z A;  5IYD K;  5D4D A;  1I6V A;  5C4J C;  4BBS C;  2JA7 K;  1ZYR A;  2A68 A;  4KN4 A;  5FLM K;  4Q4Z A;  2WB1 L;  1BDF A;  5M5X K;  2E2J K;  4MEX A;  2O5I A;  3RZO K;  3HOY C;  3GTO C;  2R93 C;  5C44 C;  4A3F K;  1R9T K;  4QIW L;  4LJZ A;  4OIR A;  4LLG A;  4Y52 C;  3S17 C;  3GTQ C;  4A3B C;  4A3L C;  2PA8 L;  4ZH4 A;  5IYC K;  3H3V L;  3I4M K;  2NVX K;  2R7Z C;  1SFO C;  3S16 K;  4A3C C;  2E2I K;  4C2M C;  5TMF A;  2R92 C;  3S1M C; 
#chains in the Genus database with same CATH topology
 4BBS K;  2WB1 D;  4GTL A;  1ZBS A;  1IL2 A;  2R93 K;  3M3Y C;  1TWG C;  3HOZ C;  1HI9 A;  4Y52 K;  1J98 A;  4A3B K;  1YNN A;  1K83 C;  1SFO K;  2RH6 A;  1O29 A;  5IP9 C;  1ZXO A;  3HKZ D;  4GTD A;  4BBR K;  1I50 C;  4FZB A;  2PMZ D;  1BGW A;  1WSR A;  5C3E C;  3WOD A;  3GTL C;  2XCO A;  4WCE S;  1TWH K;  3FKI A;  3HOX K;  3GTM A;  4KMD A;  3NUH A;  4OIO A;  3S1Q C;  1YCL A;  2B63 A;  1VH2 A;  3AD8 C;  2JA5 C;  1V5V A;  4Y7N K;  4QJV A;  3HOU K;  1HQM A;  1TWA C;  5IOT A;  2E2H A;  3K7A K;  3JST A;  3ORE A;  3S2H C;  3PO2 K;  3S1N C;  4O2D A;  2GAH C;  4YFN A;  4FM9 A;  5HL7 S;  2NVY A;  3LYW A;  3FKI K;  3BUE A;  4C45 A;  2JA7 A;  5IOS A;  1Y1W K;  5JVH S;  2B63 K;  1VRQ C;  3PIO S;  2JA6 K;  3PIP S;  2P8T A;  1WOP A;  2Y3P A;  1TWF K;  1WOR A;  3GTM C;  2D6F C;  4KM9 A;  3EQL A;  3S15 C;  3Q3Q A;  5DM6 S;  3GTO A;  4GZY A;  1O28 A;  1DCP A;  4GTA A;  3GIR A;  2E2H C;  2ZJP S;  3S2D K;  4A3E C;  4X6A C;  4QJV B;  2VUM K;  3HOV K;  2A69 A;  4WFN S;  2R92 A;  4G0U A;  5M5W K;  1WOS A;  2NVY C;  1WCM A;  2JA7 C;  5FLM C;  3L4K A;  4XLP A;  4C3I K;  2YU9 K;  4RMF A;  3CQZ A;  5IYC C;  1B4B A;  4PAB A;  4C3J K;  2EBB A;  5JVO A;  1PJ5 A;  3S16 C;  1I6H K;  2V6T A;  2L5N A;  2P5M A;  1F7U A;  3GEH A;  2E2J K;  3RZO K;  3GTG A;  3GTO C;  4A3F K;  1R9T K;  3S17 C;  3FOF A;  4A3L C;  3H0G A;  2ZUE A;  3I4M K;  3AD9 C;  2KXY A;  1WIH A;  2R92 C;  2WAQ L;  4KAR A;  3S1M C;  2L3U A;  1WCM C;  4JK1 A;  3RZD K;  2NVQ C;  3HOY K;  2PA8 D;  4NOI A;  3M4O C;  2A6E A;  3FHZ A;  5DM7 S;  2W7V A;  3N3Y A;  1SMY A;  4G7O A;  1O25 A;  1F9N A;  4MQ9 A;  1Y1V A;  5HL8 A;  1YX2 A;  3M3Y K;  4A3M C;  1TWG K;  3HOZ K;  3DLL S;  1O2A A;  3GEE A;  1XXA A;  3GTG C;  1K83 K;  1VLO A;  5TJ3 A;  5IP9 K;  3GEI A;  3H0G C;  1I50 K;  1ZQ1 C;  3N0C A;  1XPP A;  5C3E K;  2XCR B;  3GTL K;  4U67 S;  4BXX C;  2Y0S L;  4WFB S;  4C3H C;  3S1Q K;  5C4X C;  3MML B;  2A6H A;  2JA5 K;  4A3G C;  1ISE A;  2KPU A;  1J6X A;  1TWA K;  2GAG C;  3I4N C;  3S2H K;  2JA8 K;  3S1N K;  1DD5 A;  4IOA S;  2PPB A;  1Y1V C;  4GFQ A;  5L46 A;  2FQO A;  2NVX A;  2E2I A;  4A3I C;  3S1R C;  4GTB A;  3N0B A;  3T02 A;  4KC6 A;  4XLN A;  4YG2 A;  4YFX A;  3GTQ A;  2R7Z A;  4LQY A;  4OIN A;  3A8J A;  1USO A;  3IPJ A;  3T00 A;  2FQT A;  1G51 A;  3GTM K;  3S15 K;  5IYD C;  3SZY A;  2CW0 A;  1PJ6 A;  1IS1 A;  1JOE A;  2O5J A;  2E2H K;  1FEU A;  4LK1 A;  4A3E K;  1I3Q A;  4X6A K;  3H3V D;  3AQO A;  2NVX C;  3TFI A;  2E2I C;  2NVY K;  3CAG A;  4BY7 K;  1KQ4 A;  4G0W A;  4IO9 S;  5D4D A;  1I6V A;  5C4J C;  2JA7 K;  5FLM K;  3A8I A;  3AH5 A;  3OPF A;  1BDF A;  4WIL A;  4MEX A;  2O5I A;  5CHP A;  2ZUF A;  3GTK A;  5C44 C;  4LJZ A;  4OIR A;  1EK8 A;  3GTQ C;  1TWC A;  4KAT A;  5IYC K;  3H3V L;  1IE0 A;  2R7Z C;  4GTC A;  3S16 K;  4A3C C;  3LPX A;  4C2M C;  5IOQ A;  4ILD A;  4KAS A;  4A3K C;  1B4A A;  3S0X A;  3GTO K;  3S17 K;  5IYB C;  3ADA C;  4A3L K;  5JFE A;  4P5A A;  1I3Q C;  4IOC S;  2WAQ D;  4MEY A;  1USM A;  3GTJ A;  2R92 K;  3S1M K;  4KB2 A;  1WCM K;  4AH6 A;  2NVQ K;  5EGH A;  3OEP A;  1YNJ A;  4XSX A;  1O2B A;  3M4O K;  3BP3 A;  2KWA A;  3S2D C;  3GTK C;  5IP7 C;  3CQZ K;  1TWC C;  4KM8 A;  4AYB L;  2V6S A;  1O26 A;  4WJ4 A;  4A3M K;  1EH1 A;  3GTP A;  4LR2 A;  1WOO A;  3GTG K;  3CF5 S;  4P9S A;  3H0G K;  3GSI A;  4G7H A;  3GTJ C;  2PHC B;  5CJ9 A;  2V6U A;  5HQH A;  3FOE A;  2Y0S D;  2ZJR S;  1JQW A;  4BXX K;  2GSN A;  4BY1 C;  4C3H K;  3PO3 C;  1X31 C;  4WJ3 M;  1VGX A;  1XZQ B;  5C4X K;  4GTE A;  3I4M C;  4A3G K;  4Q5S A;  1O27 A;  3SZZ A;  3VA7 A;  2JH3 A;  4A3D C;  3L4J A;  2XCQ A;  3I4N K;  2NVT C;  4A93 C;  2R93 A;  1UV7 A;  5M5Y K;  1O2F B;  1Y1V K;  3DXJ A;  1C0A A;  3RZD C;  1J6V A;  1SFO A;  3GTP C;  5IOR A;  3V4G A;  4A3I K;  4A3J C;  2KQ1 A;  3S1R K;  3TFH A;  3HOW C;  5M3M K;  4DDQ A;  3S14 C;  1TWH A;  1F93 A;  1XZP A;  2BE5 A;  4XSZ A;  4KMH A;  4XCH A;  4WFA S;  4P5B A;  3HXA A;  5TMC A;  1VJE A;  4G7Z A;  5IYD K;  4BBS C;  1ZYR A;  3AQP A;  4Q4Z A;  2WB1 L;  5M5X K;  2R93 C;  1DCO A;  4LLG A;  4Y52 C;  4A3B C;  1IBA A;  2NVX K;  1SFO C;  1PJ7 A;  4GTF A;  2E2I K;  1Y1W A;  1J6W A;  4BBR C;  3HKZ L;  5C4J K;  2JA6 A;  4YFK A;  1GE9 A;  3AD7 C;  2PMZ L;  1JVI A;  5C44 K;  2JA8 C;  3QX3 A;  2CFA B;  1TWH C;  3GTQ K;  3HOX C;  1TWF A;  2R7Z K;  1WQG A;  4G0V A;  4A3C K;  4M1X A;  2RGR A;  4C2M K;  4Y7N C;  1XZP B;  1EI6 A;  5E68 A;  3HOU C;  4KB4 A;  4A3K K;  3K7A C;  3PO2 C;  2VUM A;  1XXB A;  5IYB K;  2ZJQ S;  3GDZ A;  1I3Q K;  1IQ0 A;  3TFJ A;  3FKI C;  5M3F K;  1ZVU A;  1Y1W C;  2YU9 A;  2B63 C;  2JA6 C;  4GT9 A;  4KAW X;  3G4A A;  4KMU A;  4BLB A;  1BJT A;  3GTK K;  4AYB D;  5IP7 K;  1TWC K;  1TWF C;  4BY7 C;  1XZQ A;  1R9T A;  4PAA A;  4LK0 A;  3BP8 C;  4J3N A;  2VUM C;  1WSV A;  3HOV C;  5FJ8 K;  4KDD A;  3GTJ K;  2GSO A;  4C3I C;  2YU9 C;  3G4C A;  5EGE A;  1IW7 A;  4BY1 K;  4OIP A;  3PO3 K;  2GSU A;  3A8K A;  4KMA A;  4BLA A;  4C3J C;  4BKW A;  4KN7 A;  1I6H C;  3LAJ A;  4A3D K;  1XXC A;  2NVT K;  4A93 K;  1RU0 A;  1TWG A;  2E2J C;  3RZO C;  1WQF A;  4A3F C;  1R9T C;  4QIW D;  1L0W A;  1K83 A;  3GTP K;  4OIQ A;  3T01 A;  4A3J K;  1I50 A;  1DCH A;  3HOW K;  3S14 K;  3CQZ C;  1EFW A;  3GTL A;  2A68 A;  4KN4 A;  4WF9 S;  1EQR A;  3LAP A;  1INN A;  1F7V A;  1BS2 A;  3ERE D;  3HOY C;  1AB4 A;  4QIW L;  2PA8 L;  4ZH4 A;  2JA5 A;  1WQH A;  2ZFZ A;  2CFA A;  5TMF A;  1TWA A;  4LOW A;  1O24 A;  3TTG A;  5JVG S; 
#chains in the Genus database with same CATH homology
 4BBR C;  3HKZ L;  2WB1 D;  5C4J K;  4BBS K;  1WCM C;  4JK1 A;  4A3K C;  4YFK A;  3RZD K;  2PMZ L;  2NVQ C;  3HOY K;  2PA8 D;  3GTO K;  5C44 K;  2R93 K;  4NOI A;  1TWG C;  2JA8 C;  3HOZ C;  3M3Y C;  3M4O C;  1TWH C;  5IYB C;  3HOX C;  3GTQ K;  3S17 K;  4A3L K;  1YNN A;  2A6E A;  4A3B K;  2R7Z K;  1I3Q C;  1K83 C;  1SFO K;  2WAQ D;  4MEY A;  4A3C K;  4C2M K;  5IP9 C;  2R92 K;  3HKZ D;  3S1M K;  4Y7N C;  1SMY A;  1I50 C;  4G7O A;  4BBR K;  3HOU C;  4MQ9 A;  1WCM K;  2PMZ D;  4A3K K;  3K7A C;  5C3E C;  3PO2 C;  2NVQ K;  3WOD A;  3GTL C;  3M3Y K;  4A3M C;  1YNJ A;  1TWG K;  3HOZ K;  4XSX A;  1TWH K;  5IYB K;  3HOX K;  3M4O K;  3GTG C;  3S2D C;  3GTK C;  1I3Q K;  1K83 K;  4OIO A;  5IP7 C;  3S1Q C;  1TWC C;  3CQZ K;  5IP9 K;  4AYB L;  3FKI C;  3H0G C;  2JA5 C;  4Y7N K;  1I50 K;  5M3F K;  4QJV A;  3HOU K;  1Y1W C;  1HQM A;  1TWA C;  2B63 C;  1XPP A;  3K7A K;  3S2H C;  5C3E K;  3PO2 K;  3GTL K;  3S1N C;  4YFN A;  4BXX C;  2Y0S L;  4A3M K;  2JA6 C;  4KMU A;  3GTG K;  4C3H C;  3GTK K;  4AYB D;  3S1Q K;  5IP7 K;  1TWC K;  5C4X C;  1TWF C;  2A6H A;  3FKI K;  3H0G K;  2JA5 K;  4A3G C;  4G7H A;  4BY7 C;  3GTJ C;  1TWA K;  1Y1W K;  2B63 K;  3I4N C;  3S2H K;  2Y0S D;  2JA8 K;  3S1N K;  4Y52 K;  4BXX K;  2PPB A;  4LK0 A;  1Y1V C;  2JA6 K;  4BY1 C;  4C3H K;  2VUM C;  3PO3 C;  3HOV C;  5C4X K;  1TWF K;  5FJ8 K;  3GTM C;  4A3I C;  3S1R C;  3I4M C;  4A3G K;  4Q5S A;  3EQL A;  3S15 C;  3GTJ K;  4A3D C;  3I4N K;  4XLN A;  2NVT C;  4A93 C;  4GZY A;  4YG2 A;  4C3I C;  4YFX A;  5M5Y K;  1Y1V K;  3DXJ A;  2E2H C;  2YU9 C;  3S2D K;  3RZD C;  1IW7 A;  4A3E C;  4OIN A;  4X6A C;  4QJV B;  4BY1 K;  2VUM K;  4OIP A;  3GTP C;  3PO3 K;  3HOV K;  2A69 A;  4C3J C;  3GTM K;  4A3I K;  4A3J C;  5M5W K;  3S1R K;  2NVY C;  3HOW C;  4KN7 A;  1I6H C;  2WAQ L;  5M3M K;  3S14 C;  3S15 K;  5IYD C;  4A3D K;  2NVT K;  4A93 K;  2CW0 A;  5FLM C;  2JA7 C;  4XLP A;  4C3I K;  2E2J C;  2O5J A;  2YU9 K;  2E2H K;  3RZO C;  4LK1 A;  4A3E K;  4A3F C;  1R9T C;  4QIW D;  4X6A K;  2BE5 A;  4XSZ A;  3GTP K;  4OIQ A;  5IYC C;  3H3V D;  4C3J K;  2NVX C;  4A3J K;  5TMC A;  2E2I C;  3S16 C;  2NVY K;  4BY7 K;  3HOW K;  1I6H K;  3S14 K;  3CQZ C;  4G7Z A;  5IYD K;  5D4D A;  1I6V A;  5C4J C;  4BBS C;  2JA7 K;  1ZYR A;  2A68 A;  4KN4 A;  5FLM K;  4Q4Z A;  2WB1 L;  1BDF A;  5M5X K;  2E2J K;  4MEX A;  2O5I A;  3RZO K;  3HOY C;  3GTO C;  2R93 C;  5C44 C;  4A3F K;  1R9T K;  4QIW L;  4LJZ A;  4OIR A;  4LLG A;  4Y52 C;  3S17 C;  3GTQ C;  4A3B C;  4A3L C;  2PA8 L;  4ZH4 A;  5IYC K;  3H3V L;  3I4M K;  2NVX K;  2R7Z C;  1SFO C;  3S16 K;  4A3C C;  2E2I K;  4C2M C;  5TMF A;  2R92 C;  3S1M C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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