3S17C

Rna polymerase ii initiation complex with a 9-nt rna
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
b'EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s17C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s17C01
2YU9C 3S1RK 4YFNA 1TWGC 5M5WK 3M4OK 4Y52C 3S14C 2CW0A 5C4JK 4A3EC 4QIWL 4KN7A 1I6HC 4AYBL 2VUMK 2O5JA 1IW7A 1ZYRA 2PMZD 2WB1L 1TWGK 4XLPA 3HOVC 4Y7NC 4QJVB 4A3EK 3HOUK 3HOXC 4BBRK 3WODA 3GTMC 1I6HK 1SMYA 4OIRA 5TMCA 3RZDC 2E2IC 4G7OA 4A3FK 1TWHC 3GTLC 1TWCC 3PO3C 5FJ8K 4LLGA 2A6HA 4LK1A 4OINA 2JA6C 2JA7C 1K83C 3HOYC 3S15C 4GZYA 3HOXK 5IP7C 3GTPK 3GTMK 3S1MC 3S1QC 1TWHK 4C3JK 3I4NC 4YG2A 3PO3K 3I4MK 4C2MC 4QIWD 1HQMA 4AYBD 2R92C 4A3GC 4MEXA 3HOYK 3S17K 5IP7K 4LJZA 4OIPA 3S1QK 4XLNA 2WB1D 4YFXA 3S16C 5C44K 2R7ZK 4JK1A 4BY7K 2A6EA 4C2MK 4A3GK 2YU9K 4MQ9A 4C3IC 2Y0SD 1YNNA 4Y52K 3S14K 3S16K 4A3DC 3S1NC 4ZH4A 2B63C 2Y0SL 4Q4ZA 1SFOC 2E2HC 1I6VA 2NVTC 5TMFA 3HOZC 5FLMC 4NOIA 4A3KC 4A93C 2R93C 4Y7NK 3HOVK 3GTQC 5M3MK 3RZDK 2E2IK 1SFOK 2E2HK 3H3VL 3GTOC 2R93K 4G7HA 3M3YC 1TWFC 2E2JC 1XPPA 1Y1WC 4A3KK 5IYDC 1TWCK 3GTLK 2JA7K 2JA6K 3FKIC 3K7AC 1WCMC 4A3JC 1K83K 3S15K 2JA5C 3RZOC 5IP9C 5C3EC 3GTGC 3PO2C 3S1MK 2O5IA 3GTOK 4A3MC 4BY1C 1Y1WK 3I4NK 4A3LC 5M3FK 4MEYA 3K7AK 3CQZC 4A3JK 2R92K 4G7ZA 5C3EK 4A3BC 3PO2K 3HKZL 3H0GC 4BY1K 5M5YK 2WAQL 5IYBC 4A3IC 4A3LK 3DXJA 4OIOA 2JA8C 4C3HC 4C3IK 4XSZA 4X6AC 3H3VD 3M4OC 3H0GK 5IYBK 4A3IK 3S1NK 4A3DK 4KN4A 1TWAC 2VUMC 3S2HC 2NVYC 2B63K 2JA8K 4YFKA 4C3HK 3EQLA 1Y1VC 4BXXC 2NVTK 3HOZK 5FLMK 4A93K 4X6AK 1BDFA 2PPBA 3GTKC 2PA8L 1I3QC 3GTQK 2A68A 3HOUC 1TWAK 4BBRC 3S2HK 2NVYK 4QJVA 1R9TC 4A3FC 4Q5SA 1Y1VK 4BXXK 3M3YK 1TWFK 5M5XK 3HOWC 3HKZD 3GTJC 2E2JK 3GTKK 1I3QK 5IYDK 2WAQD 4XSXA 5D4DA 4A3CC 5C4XC 3FKIK 3S2DC 1WCMK 2PMZL 4KMUA 3GTPC 2JA5K 3RZOK 5IP9K 3GTGK 1R9TK 2NVQC 4BBSC 4A3MK 4C3JC 3HOWK 3GTJK 1I50C 4A3CK 2NVXC 3I4MC 5C4XK 5IYCC 4OIQA 3CQZK 3S2DK 3S17C 4A3BK 3S1RC 2NVQK 4BBSK 2A69A 1YNJA 5C4JC 2BE5A 2PA8D 5C44C 2R7ZC 1I50K 2NVXK 4BY7C 4LK0A 5IYCK
chains in the Genus database with same CATH superfamily
3SZYA 4GTLA 1TWGC 2VUMA 4A3EC 4AYBL 1IW7A 1ZYRA 2WB1L 1JQWA 3A8KA 4WF9S 1ZXOA 4OIRA 3AQPA 4LR2A 1WQGA 4GTFA 3FOEA 1VGXA 3GTMA 5FJ8K 4LK1A 3HOXK 3S15C 4GZYA 3GTPK 3BP3A 1VJEA 3LYWA 1XZPB 3I4MK 3ADAC 2R92C 1WIHA 3L4KA 1DCOA 4XLNA 2R7ZA 1DCPA 3CAGA 1J6VA 4WILA 4A3GK 1TWGA 1ZVUA 5JVHS 4ILDA 5IOSA 3S14K 3S16K 1UV7A 5IOTA 1RU0A 1I6VA 2NVTC 5M3FK 3HOZC 4A3KC 2ZUEA 1USMA 4RMFA 2E2HA 1SFOK 2CFAA 3AH5A 5HQHA 2R93K 1Y1WC 1F93A 1TWCK 2JA7K 3FKIC 1K83K 1WCMC 3TTGA 5IP9C 3GTGC 2ZJPS 4A3MC 1DCHA 2R92A 3N0BA 1VLOA 5IOQA 1XZQA 1XXCA 3QX3A 1O27A 3VA7A 4BY1K 4A3LK 3DXJA 3H3VD 3H0GK 4DDQA 1AB4A 4GTBA 3OPFA 2JA8K 1O24A 4C3HK 3EQLA 1Y1VC 4U67S 4X6AK 1BDFA 2PA8L 4P5BA 1TWAK 4IO9S 2NVYK 4QJVA 2KXYA 1ZQ1C 3AD9C 4BXXK 1V5VA 5JFEA 3HKZD 3FKIA 1WCMA 3G4CA 1I3QK 3GTGA 1R9TA 4P9SA 4KMUA 3GTPC 1G51A 3RZOK 1I50C 4A3CK 2NVXC 3I4MC 4IOAS 4BBSK 3IPJA 5C4JC 1PJ6A 2GAGC 4YFNA 5M5WK 4FZBA 3M4OK 3S14C 3A8JA 4QIWL 1WQFA 1I6HC 3GSIA 4XLPA 3GTMC 4G7OA 1B4BA 1YCLA 1TWCC 3GTPA 1C0AA 2A6HA 2JA7C 1K83C 3HOYC 3S1QC 2GSUA 1TWHK 4C3JK 2D6FC 4YG2A 3PO3K 2P8TA 5IP7K 2KPUA 3CF5S 3GEEA 4YFXA 1ZBSA 4KC6A 4JK1A 4BY7K 2A6EA 4C2MK 2YU9K 3L4JA 4MQ9A 3TFJA 3JSTA 1VH2A 3BP8C 4BLBA 2E2HC 4XCHA 3T02A 1F9NA 1SFOA 5DM7S 3RZDK 4KMDA 1TWCA 1XPPA 2JA7A 1K83A 2JA6K 1J98A 3GDZA 3N3YA 3RZOC 5C3EC 3PO2C 3S1MK 2O5IA 1YX2A 3GTOK 2P5MA 2ZUFA 3K7AK 4A3JK 4WFAS 4G7ZA 1EQRA 5E68A 1O2FB 4KM9A 5HL8A 2EBBA 5IYBC 4A3IC 1O2AA 4KMHA 3AQOA 4OIOA 1ISEA 1WOSA 1XZPA 3H0GA 4KARA 3M4OC 3TFHA 4BLAA 3S1NK 4KN4A 3S2HC 3OREA 4P5AA 5L46A 5FLMK 3GTKC 2PPBA 1TWAA 2PHCB 2GSOA 2NVYA 5TJ3A 4C45A 4PABA 1R9TC 2KQ1A 1WORA 2V6SA 1I3QA 1O25A 1TWFK 5IYDK 2WAQD 5C4XC 1HI9A 2JA5K 5HL7S 4C3JC 3HOWK 3GTJK 4KM8A 3S2DK 4OIQA 3CQZK 2NVQK 1O29A 4BY7C 4LK0A 2XCOA 5IYCK 5CJ9A 2YU9C 3S1RK 4G0WA 3T01A 4KN7A 3S0XA 2O5JA 2PMZD 3GTKA 2ZJQS 2L5NA 1O2BA 1TWGK 4QJVB 2FQTA 1VRQC 4A3EK 3HOXC 4BBRK 3WODA 3A8IA 5TMCA 3RZDC 4A3FK 2Y3PA 4OINA 2JA6C 1TWHA 3FHZA 3S1MC 4O2DA 1EK8A 5DM6S 5EGHA 1KQ4A 4AYBD 4A3GC 4GFQA 5EGEA 4LJZA 2WB1D 3DLLS 3LAPA 3S16C 5C44K 1IL2A 2YU9A 3GEHA 4GTCA 1B4AA 3G4AA 1YNNA 4Y52K 1BS2A 3S1NC 1WOPA 4WFBS 2Y0SL 4Q4ZA 1SFOC 1INNA 3N0CA 2R93C 5TMFA 1USOA 5FLMC 4NOIA 3HOVK 4Y7NK 3GIRA 5M3MK 3AD8C 1IS1A 2E2IK 3H3VL 1TWFC 4A3KK 3GTLK 2JA6A 5IYDC 2L3UA 1F7VA 1X31C 3PIPS 3GTOA 5JVGS 2JA5C 4WJ3M 4KMAA 4BY1C 1Y1WK 3I4NK 4A3LC 3ERED 4MEYA 3CQZC 1PJ7A 3HKZL 3H0GC 2JA8C 5JVOA 4C3HC 4C3IK 1IBAA 4XSZA 4X6AC 4A3DK 4M1XA 1TWAC 2NVYC 2R93A 2B63K 4GTEA 3BUEA 4BXXC 4A93K 2ZJRS 1I3QC 3GTQK 2A68A 3MMLB 4BBRC 3T00A 1TWFA 4A3FC 4WCES 1Y1VK 3M3YK 5M5XK 4KAWX 2E2JK 2JA5A 5D4DA 4A3CC 1IE0A 2RGRA 3GTJA 4BBSC 1FEUA 2GAHC 1EI6A 3CQZA 1DD5A 4A3BK 3NUHA 2A69A 1YNJA 2GSNA 2PA8D 5C44C 1O26A 1I50K 2NVXK 4LOWA 1J6WA 4KATA 4Y52C 5C4JK 2CW0A 2CFAB 2VUMK 4GTDA 2V6UA 3HOVC 4Y7NC 4FM9A 1WQHA 3HOUK 1I6HK 2V6TA 1SMYA 2E2IC 1EFWA 1TWHC 1XZQB 3GTLC 3SZZA 4GTAA 3PO3C 4PAAA 4LLGA 3GTMK 4GT9A 5IP7C 3PIOS 4KB4A 3LPXA 2KWAA 3I4NC 1JOEA 4C2MC 4QIWD 1HQMA 3TFIA 3HOYK 3S17K 4MEXA 4OIPA 3S1QK 1JVIA 3AD7C 2R7ZK 1EH1A 4C3IC 2Y0SD 4AH6A 4A3DC 4ZH4A 1GE9A 1XXAA 4KDDA 2B63C 1BJTA 4WJ4A 2ZFZA 4A93C 3GTQC 1WOOA 2E2IA 1IQ0A 2E2HK 4WFNS 3GTLA 3GTOC 4G7HA 3M3YC 2E2JC 2JH3A 1WSVA 4BKWA 3K7AC 4A3JC 3S15K 2W7VA 3GEIA 1Y1WA 4IOCS 1WSRA 5CHPA 2R92K 5C3EK 4A3BC 3PO2K 3FOFA 2XCRB 5M5YK 2WAQL 1XXBA 2XCQA 1O28A 3Q3QA 3LAJA 5IYBK 4A3IK 1F7UA 2B63A 4KB2A 2VUMC 1L0WA 1BGWA 4YFKA 2NVTK 4J3NA 3HOZK 3GTQA 3HXAA 1PJ5A 3HOUC 3S2HK 1Y1VA 4G0UA 4Q5SA 3HOWC 3GTKK 3GTJC 4XSXA 5IORA 3FKIK 3S2DC 1WCMK 2PMZL 4KASA 4G0VA 5IP9K 2RH6A 1R9TK 1J6XA 2NVQC 3GTGK 4A3MK 3OEPA 5C4XK 5IYCC 3S17C 3S1RC 1I50A 2NVXA 2BE5A 4LQYA 2R7ZC 3V4GA 2FQOA
chains in the Genus database with same CATH topology
2YU9C 3S1RK 4YFNA 1TWGC 5M5WK 3M4OK 4Y52C 3S14C 2CW0A 5C4JK 4A3EC 4QIWL 4KN7A 1I6HC 4AYBL 2VUMK 2O5JA 1IW7A 1ZYRA 2PMZD 2WB1L 1TWGK 4XLPA 3HOVC 4Y7NC 4QJVB 4A3EK 3HOUK 3HOXC 4BBRK 3WODA 3GTMC 1I6HK 1SMYA 4OIRA 5TMCA 3RZDC 2E2IC 4G7OA 4A3FK 1TWHC 3GTLC 1TWCC 3PO3C 5FJ8K 4LLGA 2A6HA 4LK1A 4OINA 2JA6C 2JA7C 1K83C 3HOYC 3S15C 4GZYA 3HOXK 5IP7C 3GTPK 3GTMK 3S1MC 3S1QC 1TWHK 4C3JK 3I4NC 4YG2A 3PO3K 3I4MK 4C2MC 4QIWD 1HQMA 4AYBD 2R92C 4A3GC 4MEXA 3HOYK 3S17K 5IP7K 4LJZA 4OIPA 3S1QK 4XLNA 2WB1D 4YFXA 3S16C 5C44K 2R7ZK 4JK1A 4BY7K 2A6EA 4C2MK 4A3GK 2YU9K 4MQ9A 4C3IC 2Y0SD 1YNNA 4Y52K 3S14K 3S16K 4A3DC 3S1NC 4ZH4A 2B63C 2Y0SL 4Q4ZA 1SFOC 2E2HC 1I6VA 2NVTC 5TMFA 3HOZC 5FLMC 4NOIA 4A3KC 4A93C 2R93C 4Y7NK 3HOVK 3GTQC 5M3MK 3RZDK 2E2IK 1SFOK 2E2HK 3H3VL 3GTOC 2R93K 4G7HA 3M3YC 1TWFC 2E2JC 1XPPA 1Y1WC 4A3KK 5IYDC 1TWCK 3GTLK 2JA7K 2JA6K 3FKIC 3K7AC 1WCMC 4A3JC 1K83K 3S15K 2JA5C 3RZOC 5IP9C 5C3EC 3GTGC 3PO2C 3S1MK 2O5IA 3GTOK 4A3MC 4BY1C 1Y1WK 3I4NK 4A3LC 5M3FK 4MEYA 3K7AK 3CQZC 4A3JK 2R92K 4G7ZA 5C3EK 4A3BC 3PO2K 3HKZL 3H0GC 4BY1K 5M5YK 2WAQL 5IYBC 4A3IC 4A3LK 3DXJA 4OIOA 2JA8C 4C3HC 4C3IK 4XSZA 4X6AC 3H3VD 3M4OC 3H0GK 5IYBK 4A3IK 3S1NK 4A3DK 4KN4A 1TWAC 2VUMC 3S2HC 2NVYC 2B63K 2JA8K 4YFKA 4C3HK 3EQLA 1Y1VC 4BXXC 2NVTK 3HOZK 5FLMK 4A93K 4X6AK 1BDFA 2PPBA 3GTKC 2PA8L 1I3QC 3GTQK 2A68A 3HOUC 1TWAK 4BBRC 3S2HK 2NVYK 4QJVA 1R9TC 4A3FC 4Q5SA 1Y1VK 4BXXK 3M3YK 1TWFK 5M5XK 3HOWC 3HKZD 3GTJC 2E2JK 3GTKK 1I3QK 5IYDK 2WAQD 4XSXA 5D4DA 4A3CC 5C4XC 3FKIK 3S2DC 1WCMK 2PMZL 4KMUA 3GTPC 2JA5K 3RZOK 5IP9K 3GTGK 1R9TK 2NVQC 4BBSC 4A3MK 4C3JC 3HOWK 3GTJK 1I50C 4A3CK 2NVXC 3I4MC 5C4XK 5IYCC 4OIQA 3CQZK 3S2DK 3S17C 4A3BK 3S1RC 2NVQK 4BBSK 2A69A 1YNJA 5C4JC 2BE5A 2PA8D 5C44C 2R7ZC 1I50K 2NVXK 4BY7C 4LK0A 5IYCK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YU9 C;  3S1R K;  4YFN A;  1TWG C;  5M5W K;  3M4O K;  4Y52 C;  3S14 C;  2CW0 A;  5C4J K;  4A3E C;  4QIW L;  4KN7 A;  1I6H C;  4AYB L;  2VUM K;  2O5J A;  1IW7 A;  1ZYR A;  2PMZ D;  2WB1 L;  1TWG K;  4XLP A;  3HOV C;  4Y7N C;  4QJV B;  4A3E K;  3HOU K;  3HOX C;  4BBR K;  3WOD A;  3GTM C;  1I6H K;  1SMY A;  4OIR A;  5TMC A;  3RZD C;  2E2I C;  4G7O A;  4A3F K;  1TWH C;  3GTL C;  1TWC C;  3PO3 C;  5FJ8 K;  4LLG A;  2A6H A;  4LK1 A;  4OIN A;  2JA6 C;  2JA7 C;  1K83 C;  3HOY C;  3S15 C;  4GZY A;  3HOX K;  5IP7 C;  3GTP K;  3GTM K;  3S1M C;  3S1Q C;  1TWH K;  4C3J K;  3I4N C;  4YG2 A;  3PO3 K;  3I4M K;  4C2M C;  4QIW D;  1HQM A;  4AYB D;  2R92 C;  4A3G C;  4MEX A;  3HOY K;  3S17 K;  5IP7 K;  4LJZ A;  4OIP A;  3S1Q K;  4XLN A;  2WB1 D;  4YFX A;  3S16 C;  5C44 K;  2R7Z K;  4JK1 A;  4BY7 K;  2A6E A;  4C2M K;  4A3G K;  2YU9 K;  4MQ9 A;  4C3I C;  2Y0S D;  1YNN A;  4Y52 K;  3S14 K;  3S16 K;  4A3D C;  3S1N C;  4ZH4 A;  2B63 C;  2Y0S L;  4Q4Z A;  1SFO C;  2E2H C;  1I6V A;  2NVT C;  5TMF A;  3HOZ C;  5FLM C;  4NOI A;  4A3K C;  4A93 C;  2R93 C;  4Y7N K;  3HOV K;  3GTQ C;  5M3M K;  3RZD K;  2E2I K;  1SFO K;  2E2H K;  3H3V L;  3GTO C;  2R93 K;  4G7H A;  3M3Y C;  1TWF C;  2E2J C;  1XPP A;  1Y1W C;  4A3K K;  5IYD C;  1TWC K;  3GTL K;  2JA7 K;  2JA6 K;  3FKI C;  3K7A C;  1WCM C;  4A3J C;  1K83 K;  3S15 K;  2JA5 C;  3RZO C;  5IP9 C;  5C3E C;  3GTG C;  3PO2 C;  3S1M K;  2O5I A;  3GTO K;  4A3M C;  4BY1 C;  1Y1W K;  3I4N K;  4A3L C;  5M3F K;  4MEY A;  3K7A K;  3CQZ C;  4A3J K;  2R92 K;  4G7Z A;  5C3E K;  4A3B C;  3PO2 K;  3HKZ L;  3H0G C;  4BY1 K;  5M5Y K;  2WAQ L;  5IYB C;  4A3I C;  4A3L K;  3DXJ A;  4OIO A;  2JA8 C;  4C3H C;  4C3I K;  4XSZ A;  4X6A C;  3H3V D;  3M4O C;  3H0G K;  5IYB K;  4A3I K;  3S1N K;  4A3D K;  4KN4 A;  1TWA C;  2VUM C;  3S2H C;  2NVY C;  2B63 K;  2JA8 K;  4YFK A;  4C3H K;  3EQL A;  1Y1V C;  4BXX C;  2NVT K;  3HOZ K;  5FLM K;  4A93 K;  4X6A K;  1BDF A;  2PPB A;  3GTK C;  2PA8 L;  1I3Q C;  3GTQ K;  2A68 A;  3HOU C;  1TWA K;  4BBR C;  3S2H K;  2NVY K;  4QJV A;  1R9T C;  4A3F C;  4Q5S A;  1Y1V K;  4BXX K;  3M3Y K;  1TWF K;  5M5X K;  3HOW C;  3HKZ D;  3GTJ C;  2E2J K;  3GTK K;  1I3Q K;  5IYD K;  2WAQ D;  4XSX A;  5D4D A;  4A3C C;  5C4X C;  3FKI K;  3S2D C;  1WCM K;  2PMZ L;  4KMU A;  3GTP C;  2JA5 K;  3RZO K;  5IP9 K;  3GTG K;  1R9T K;  2NVQ C;  4BBS C;  4A3M K;  4C3J C;  3HOW K;  3GTJ K;  1I50 C;  4A3C K;  2NVX C;  3I4M C;  5C4X K;  5IYC C;  4OIQ A;  3CQZ K;  3S2D K;  3S17 C;  4A3B K;  3S1R C;  2NVQ K;  4BBS K;  2A69 A;  1YNJ A;  5C4J C;  2BE5 A;  2PA8 D;  5C44 C;  2R7Z C;  1I50 K;  2NVX K;  4BY7 C;  4LK0 A;  5IYC K; 
#chains in the Genus database with same CATH topology
 3SZY A;  4GTL A;  1TWG C;  2VUM A;  4A3E C;  4AYB L;  1IW7 A;  1ZYR A;  2WB1 L;  1JQW A;  3A8K A;  4WF9 S;  1ZXO A;  4OIR A;  3AQP A;  4LR2 A;  1WQG A;  4GTF A;  3FOE A;  1VGX A;  3GTM A;  5FJ8 K;  4LK1 A;  3HOX K;  3S15 C;  4GZY A;  3GTP K;  3BP3 A;  1VJE A;  3LYW A;  1XZP B;  3I4M K;  3ADA C;  2R92 C;  1WIH A;  3L4K A;  1DCO A;  4XLN A;  2R7Z A;  1DCP A;  3CAG A;  1J6V A;  4WIL A;  4A3G K;  1TWG A;  1ZVU A;  5JVH S;  4ILD A;  5IOS A;  3S14 K;  3S16 K;  1UV7 A;  5IOT A;  1RU0 A;  1I6V A;  2NVT C;  5M3F K;  3HOZ C;  4A3K C;  2ZUE A;  1USM A;  4RMF A;  2E2H A;  1SFO K;  2CFA A;  3AH5 A;  5HQH A;  2R93 K;  1Y1W C;  1F93 A;  1TWC K;  2JA7 K;  3FKI C;  1K83 K;  1WCM C;  3TTG A;  5IP9 C;  3GTG C;  2ZJP S;  4A3M C;  1DCH A;  2R92 A;  3N0B A;  1VLO A;  5IOQ A;  1XZQ A;  1XXC A;  3QX3 A;  1O27 A;  3VA7 A;  4BY1 K;  4A3L K;  3DXJ A;  3H3V D;  3H0G K;  4DDQ A;  1AB4 A;  4GTB A;  3OPF A;  2JA8 K;  1O24 A;  4C3H K;  3EQL A;  1Y1V C;  4U67 S;  4X6A K;  1BDF A;  2PA8 L;  4P5B A;  1TWA K;  4IO9 S;  2NVY K;  4QJV A;  2KXY A;  1ZQ1 C;  3AD9 C;  4BXX K;  1V5V A;  5JFE A;  3HKZ D;  3FKI A;  1WCM A;  3G4C A;  1I3Q K;  3GTG A;  1R9T A;  4P9S A;  4KMU A;  3GTP C;  1G51 A;  3RZO K;  1I50 C;  4A3C K;  2NVX C;  3I4M C;  4IOA S;  4BBS K;  3IPJ A;  5C4J C;  1PJ6 A;  2GAG C;  4YFN A;  5M5W K;  4FZB A;  3M4O K;  3S14 C;  3A8J A;  4QIW L;  1WQF A;  1I6H C;  3GSI A;  4XLP A;  3GTM C;  4G7O A;  1B4B A;  1YCL A;  1TWC C;  3GTP A;  1C0A A;  2A6H A;  2JA7 C;  1K83 C;  3HOY C;  3S1Q C;  2GSU A;  1TWH K;  4C3J K;  2D6F C;  4YG2 A;  3PO3 K;  2P8T A;  5IP7 K;  2KPU A;  3CF5 S;  3GEE A;  4YFX A;  1ZBS A;  4KC6 A;  4JK1 A;  4BY7 K;  2A6E A;  4C2M K;  2YU9 K;  3L4J A;  4MQ9 A;  3TFJ A;  3JST A;  1VH2 A;  3BP8 C;  4BLB A;  2E2H C;  4XCH A;  3T02 A;  1F9N A;  1SFO A;  5DM7 S;  3RZD K;  4KMD A;  1TWC A;  1XPP A;  2JA7 A;  1K83 A;  2JA6 K;  1J98 A;  3GDZ A;  3N3Y A;  3RZO C;  5C3E C;  3PO2 C;  3S1M K;  2O5I A;  1YX2 A;  3GTO K;  2P5M A;  2ZUF A;  3K7A K;  4A3J K;  4WFA S;  4G7Z A;  1EQR A;  5E68 A;  1O2F B;  4KM9 A;  5HL8 A;  2EBB A;  5IYB C;  4A3I C;  1O2A A;  4KMH A;  3AQO A;  4OIO A;  1ISE A;  1WOS A;  1XZP A;  3H0G A;  4KAR A;  3M4O C;  3TFH A;  4BLA A;  3S1N K;  4KN4 A;  3S2H C;  3ORE A;  4P5A A;  5L46 A;  5FLM K;  3GTK C;  2PPB A;  1TWA A;  2PHC B;  2GSO A;  2NVY A;  5TJ3 A;  4C45 A;  4PAB A;  1R9T C;  2KQ1 A;  1WOR A;  2V6S A;  1I3Q A;  1O25 A;  1TWF K;  5IYD K;  2WAQ D;  5C4X C;  1HI9 A;  2JA5 K;  5HL7 S;  4C3J C;  3HOW K;  3GTJ K;  4KM8 A;  3S2D K;  4OIQ A;  3CQZ K;  2NVQ K;  1O29 A;  4BY7 C;  4LK0 A;  2XCO A;  5IYC K;  5CJ9 A;  2YU9 C;  3S1R K;  4G0W A;  3T01 A;  4KN7 A;  3S0X A;  2O5J A;  2PMZ D;  3GTK A;  2ZJQ S;  2L5N A;  1O2B A;  1TWG K;  4QJV B;  2FQT A;  1VRQ C;  4A3E K;  3HOX C;  4BBR K;  3WOD A;  3A8I A;  5TMC A;  3RZD C;  4A3F K;  2Y3P A;  4OIN A;  2JA6 C;  1TWH A;  3FHZ A;  3S1M C;  4O2D A;  1EK8 A;  5DM6 S;  5EGH A;  1KQ4 A;  4AYB D;  4A3G C;  4GFQ A;  5EGE A;  4LJZ A;  2WB1 D;  3DLL S;  3LAP A;  3S16 C;  5C44 K;  1IL2 A;  2YU9 A;  3GEH A;  4GTC A;  1B4A A;  3G4A A;  1YNN A;  4Y52 K;  1BS2 A;  3S1N C;  1WOP A;  4WFB S;  2Y0S L;  4Q4Z A;  1SFO C;  1INN A;  3N0C A;  2R93 C;  5TMF A;  1USO A;  5FLM C;  4NOI A;  3HOV K;  4Y7N K;  3GIR A;  5M3M K;  3AD8 C;  1IS1 A;  2E2I K;  3H3V L;  1TWF C;  4A3K K;  3GTL K;  2JA6 A;  5IYD C;  2L3U A;  1F7V A;  1X31 C;  3PIP S;  3GTO A;  5JVG S;  2JA5 C;  4WJ3 M;  4KMA A;  4BY1 C;  1Y1W K;  3I4N K;  4A3L C;  3ERE D;  4MEY A;  3CQZ C;  1PJ7 A;  3HKZ L;  3H0G C;  2JA8 C;  5JVO A;  4C3H C;  4C3I K;  1IBA A;  4XSZ A;  4X6A C;  4A3D K;  4M1X A;  1TWA C;  2NVY C;  2R93 A;  2B63 K;  4GTE A;  3BUE A;  4BXX C;  4A93 K;  2ZJR S;  1I3Q C;  3GTQ K;  2A68 A;  3MML B;  4BBR C;  3T00 A;  1TWF A;  4A3F C;  4WCE S;  1Y1V K;  3M3Y K;  5M5X K;  4KAW X;  2E2J K;  2JA5 A;  5D4D A;  4A3C C;  1IE0 A;  2RGR A;  3GTJ A;  4BBS C;  1FEU A;  2GAH C;  1EI6 A;  3CQZ A;  1DD5 A;  4A3B K;  3NUH A;  2A69 A;  1YNJ A;  2GSN A;  2PA8 D;  5C44 C;  1O26 A;  1I50 K;  2NVX K;  4LOW A;  1J6W A;  4KAT A;  4Y52 C;  5C4J K;  2CW0 A;  2CFA B;  2VUM K;  4GTD A;  2V6U A;  3HOV C;  4Y7N C;  4FM9 A;  1WQH A;  3HOU K;  1I6H K;  2V6T A;  1SMY A;  2E2I C;  1EFW A;  1TWH C;  1XZQ B;  3GTL C;  3SZZ A;  4GTA A;  3PO3 C;  4PAA A;  4LLG A;  3GTM K;  4GT9 A;  5IP7 C;  3PIO S;  4KB4 A;  3LPX A;  2KWA A;  3I4N C;  1JOE A;  4C2M C;  4QIW D;  1HQM A;  3TFI A;  3HOY K;  3S17 K;  4MEX A;  4OIP A;  3S1Q K;  1JVI A;  3AD7 C;  2R7Z K;  1EH1 A;  4C3I C;  2Y0S D;  4AH6 A;  4A3D C;  4ZH4 A;  1GE9 A;  1XXA A;  4KDD A;  2B63 C;  1BJT A;  4WJ4 A;  2ZFZ A;  4A93 C;  3GTQ C;  1WOO A;  2E2I A;  1IQ0 A;  2E2H K;  4WFN S;  3GTL A;  3GTO C;  4G7H A;  3M3Y C;  2E2J C;  2JH3 A;  1WSV A;  4BKW A;  3K7A C;  4A3J C;  3S15 K;  2W7V A;  3GEI A;  1Y1W A;  4IOC S;  1WSR A;  5CHP A;  2R92 K;  5C3E K;  4A3B C;  3PO2 K;  3FOF A;  2XCR B;  5M5Y K;  2WAQ L;  1XXB A;  2XCQ A;  1O28 A;  3Q3Q A;  3LAJ A;  5IYB K;  4A3I K;  1F7U A;  2B63 A;  4KB2 A;  2VUM C;  1L0W A;  1BGW A;  4YFK A;  2NVT K;  4J3N A;  3HOZ K;  3GTQ A;  3HXA A;  1PJ5 A;  3HOU C;  3S2H K;  1Y1V A;  4G0U A;  4Q5S A;  3HOW C;  3GTK K;  3GTJ C;  4XSX A;  5IOR A;  3FKI K;  3S2D C;  1WCM K;  2PMZ L;  4KAS A;  4G0V A;  5IP9 K;  2RH6 A;  1R9T K;  1J6X A;  2NVQ C;  3GTG K;  4A3M K;  3OEP A;  5C4X K;  5IYC C;  3S17 C;  3S1R C;  1I50 A;  2NVX A;  2BE5 A;  4LQY A;  2R7Z C;  3V4G A;  2FQO A; 
#chains in the Genus database with same CATH homology
 2YU9 C;  3S1R K;  4YFN A;  1TWG C;  5M5W K;  3M4O K;  4Y52 C;  3S14 C;  2CW0 A;  5C4J K;  4A3E C;  4QIW L;  4KN7 A;  1I6H C;  4AYB L;  2VUM K;  2O5J A;  1IW7 A;  1ZYR A;  2PMZ D;  2WB1 L;  1TWG K;  4XLP A;  3HOV C;  4Y7N C;  4QJV B;  4A3E K;  3HOU K;  3HOX C;  4BBR K;  3WOD A;  3GTM C;  1I6H K;  1SMY A;  4OIR A;  5TMC A;  3RZD C;  2E2I C;  4G7O A;  4A3F K;  1TWH C;  3GTL C;  1TWC C;  3PO3 C;  5FJ8 K;  4LLG A;  2A6H A;  4LK1 A;  4OIN A;  2JA6 C;  2JA7 C;  1K83 C;  3HOY C;  3S15 C;  4GZY A;  3HOX K;  5IP7 C;  3GTP K;  3GTM K;  3S1M C;  3S1Q C;  1TWH K;  4C3J K;  3I4N C;  4YG2 A;  3PO3 K;  3I4M K;  4C2M C;  4QIW D;  1HQM A;  4AYB D;  2R92 C;  4A3G C;  4MEX A;  3HOY K;  3S17 K;  5IP7 K;  4LJZ A;  4OIP A;  3S1Q K;  4XLN A;  2WB1 D;  4YFX A;  3S16 C;  5C44 K;  2R7Z K;  4JK1 A;  4BY7 K;  2A6E A;  4C2M K;  4A3G K;  2YU9 K;  4MQ9 A;  4C3I C;  2Y0S D;  1YNN A;  4Y52 K;  3S14 K;  3S16 K;  4A3D C;  3S1N C;  4ZH4 A;  2B63 C;  2Y0S L;  4Q4Z A;  1SFO C;  2E2H C;  1I6V A;  2NVT C;  5TMF A;  3HOZ C;  5FLM C;  4NOI A;  4A3K C;  4A93 C;  2R93 C;  4Y7N K;  3HOV K;  3GTQ C;  5M3M K;  3RZD K;  2E2I K;  1SFO K;  2E2H K;  3H3V L;  3GTO C;  2R93 K;  4G7H A;  3M3Y C;  1TWF C;  2E2J C;  1XPP A;  1Y1W C;  4A3K K;  5IYD C;  1TWC K;  3GTL K;  2JA7 K;  2JA6 K;  3FKI C;  3K7A C;  1WCM C;  4A3J C;  1K83 K;  3S15 K;  2JA5 C;  3RZO C;  5IP9 C;  5C3E C;  3GTG C;  3PO2 C;  3S1M K;  2O5I A;  3GTO K;  4A3M C;  4BY1 C;  1Y1W K;  3I4N K;  4A3L C;  5M3F K;  4MEY A;  3K7A K;  3CQZ C;  4A3J K;  2R92 K;  4G7Z A;  5C3E K;  4A3B C;  3PO2 K;  3HKZ L;  3H0G C;  4BY1 K;  5M5Y K;  2WAQ L;  5IYB C;  4A3I C;  4A3L K;  3DXJ A;  4OIO A;  2JA8 C;  4C3H C;  4C3I K;  4XSZ A;  4X6A C;  3H3V D;  3M4O C;  3H0G K;  5IYB K;  4A3I K;  3S1N K;  4A3D K;  4KN4 A;  1TWA C;  2VUM C;  3S2H C;  2NVY C;  2B63 K;  2JA8 K;  4YFK A;  4C3H K;  3EQL A;  1Y1V C;  4BXX C;  2NVT K;  3HOZ K;  5FLM K;  4A93 K;  4X6A K;  1BDF A;  2PPB A;  3GTK C;  2PA8 L;  1I3Q C;  3GTQ K;  2A68 A;  3HOU C;  1TWA K;  4BBR C;  3S2H K;  2NVY K;  4QJV A;  1R9T C;  4A3F C;  4Q5S A;  1Y1V K;  4BXX K;  3M3Y K;  1TWF K;  5M5X K;  3HOW C;  3HKZ D;  3GTJ C;  2E2J K;  3GTK K;  1I3Q K;  5IYD K;  2WAQ D;  4XSX A;  5D4D A;  4A3C C;  5C4X C;  3FKI K;  3S2D C;  1WCM K;  2PMZ L;  4KMU A;  3GTP C;  2JA5 K;  3RZO K;  5IP9 K;  3GTG K;  1R9T K;  2NVQ C;  4BBS C;  4A3M K;  4C3J C;  3HOW K;  3GTJ K;  1I50 C;  4A3C K;  2NVX C;  3I4M C;  5C4X K;  5IYC C;  4OIQ A;  3CQZ K;  3S2D K;  3S17 C;  4A3B K;  3S1R C;  2NVQ K;  4BBS K;  2A69 A;  1YNJ A;  5C4J C;  2BE5 A;  2PA8 D;  5C44 C;  2R7Z C;  1I50 K;  2NVX K;  4BY7 C;  4LK0 A;  5IYC K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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