3S17C

Rna polymerase ii initiation complex with a 9-nt rna
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule tags Transcription/rna/dna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s17C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s17C01
4KN4A 4BXXC 2CW0A 2WAQD 3S1MC 5IP9K 4A3CC 2BE5A 4A3DK 3GTKK 2YU9K 3I4MK 4Y7NK 2Y0SD 3S17K 4LJZA 2Y0SL 4C2MK 3S2HK 1SFOK 4G7HA 5C44C 2R7ZC 1Y1WC 3RZOC 4C3IK 4MEXA 2NVQC 1I50K 4BY1C 2JA5C 3S15K 3GTMK 3GTKC 4C3HC 3HOYC 4Y52C 4A93K 2PA8L 4X6AC 1TWHC 5C4JK 4A3JK 4LLGA 4A3FK 4QIWL 1Y1VC 2WAQL 4X6AK 1K83K 3S16K 4A3BC 4A3MC 2WB1L 4YFNA 4OIQA 5TMFA 3GTQC 1I3QC 3DXJA 3GTGC 2E2IC 5M5XK 4XLNA 4A3BK 1TWGC 3S1MK 5IYCC 2R93K 2JA8C 3GTJK 2NVTC 1YNJA 1I3QK 2VUMK 3GTGK 2E2JK 2A6HA 3FKIC 1TWHK 3H0GK 3S1RK 4BY7K 4A3LC 4OINA 5IP7C 4A3EK 2A6EA 5D4DA 3GTLC 3HOWK 4YG2A 2NVXC 3PO2C 4A3GC 3CQZK 4QIWD 2YU9C 2E2HK 1R9TC 1I6HC 4XSXA 4QJVB 5M3FK 3RZDK 4YFXA 3I4NC 1I50C 4A3IC 2NVQK 1R9TK 3GTPC 4BBRC 1K83C 3H0GC 3S1RC 4Q4ZA 4Y52K 3K7AK 3HOUK 1I6VA 4XSZA 2NVYC 3S1QC 4A3FC 5C4XC 4AYBD 5IYDC 1TWGK 3S16C 4BXXK 2NVYK 2R92K 2VUMC 4C2MC 2JA5K 3S1QK 3PO3K 3RZDC 3M3YK 1SMYA 3M4OC 3I4MC 1TWFC 2JA6K 3HOZK 4BBSK 3S14K 3GTPK 1IW7A 2A68A 3HKZD 3GTQK 4A3CK 3M3YC 4Q5SA 3S14C 3H3VL 5IP9C 3GTMC 4OIPA 3FKIK 4C3JC 3HOVK 3S1NK 4C3IC 4MEYA 4KN7A 4A93C 2PMZL 5FLMK 2PMZD 4A3EC 5IP7K 2E2HC 4A3GK 1WCMC 4MQ9A 3HOVC 5IYBC 3HOWC 3S1NC 4A3KK 2B63C 2E2IK 4Y7NC 5FJ8K 4NOIA 1TWCC 4G7OA 5C4JC 1XPPA 2NVTK 3S2HC 4A3KC 3HOXC 3GTOC 4A3DC 2A69A 5M3MK 1Y1VK 1TWCK 2JA7K 2R92C 2PPBA 4BY1K 3GTJC 4OIOA 1TWAC 3M4OK 5C4XK 3HKZL 1SFOC 5FLMC 4KMUA 2NVXK 4LK1A 4A3JC 5IYBK 3S2DK 5IYDK 3H3VD 4XLPA 1Y1WK 2WB1D 4YFKA 4C3HK 3HOYK 4G7ZA 1TWFK 4A3LK 2R93C 5IYCK 3HOUC 3S15C 3WODA 3PO3C 4C3JK 2E2JC 4BBRK 1HQMA 2JA7C 4LK0A 3HOZC 5C3EK 1BDFA 5C44K 2R7ZK 4AYBL 3RZOK 3CQZC 2O5JA 4A3IK 3PO2K 2O5IA 4A3MK 4GZYA 3HOXK 3GTOK 3S2DC 3S17C 2PA8D 3GTLK 1I6HK 5M5WK 1YNNA 3K7AC 2B63K 2JA6C 4JK1A 4BBSC 2JA8K 3I4NK 1WCMK 3EQLA 4BY7C 1ZYRA 1TWAK 4ZH4A 4OIRA 5M5YK 5C3EC 5TMCA 4QJVA
chains in the Genus database with same CATH superfamily
2EBBA 2CFAA 3S1MC 4KM8A 2P8TA 3I4MK 4Y7NK 3GTOA 3Q3QA 1SFOK 2R7ZC 1VH2A 2JH3A 4MEXA 4KC6A 1WIHA 3ADAC 2PA8L 4X6AC 4A3JK 4A3FK 2WB1L 1WQFA 1J98A 1I3QA 1I3QC 1L0WA 4XLNA 4A3BK 1VJEA 3GTGK 2E2JK 2A6HA 1KQ4A 1TWAA 1F7VA 1EFWA 3HOWK 4LR2A 2YU9C 1R9TC 1I6HC 4QJVB 3N0BA 5M3FK 1O2FB 4YFXA 4A3IC 2ZUEA 1K83C 3S1RC 4Q4ZA 4J3NA 1EH1A 3HOUK 2XCRB 2NVYC 5IORA 1YX2A 2R92K 2FQTA 2JA5K 3RZDC 4LOWA 3T01A 4BBSK 3HOZK 3S14K 2V6SA 3HKZD 3LAJA 5DM7S 1O24A 2JA5A 3H3VL 2VUMA 1BS2A 3GTMC 4OIPA 2E2IA 3FKIK 4C3JC 3S1NK 1XXBA 4C3IC 4MEYA 2PMZL 3SZZA 4AH6A 5FLMK 4A3GK 1Y1VA 4A3KK 2B63C 1TWCC 5C4JC 3GTOC 4WILA 1Y1VK 3AD9C 2ZJPS 2PPBA 1TWAC 4GTFA 5FLMC 3N3YA 4LK1A 3H3VD 4XLPA 2ZUFA 1IE0A 3HOYK 1J6WA 2R93C 5IYCK 3S15C 3WODA 5E68A 2JA7C 4LK0A 3HOZC 4G0UA 1AB4A 3PO2K 4XCHA 4IO9S 3HOXK 3GTLK 1O27A 3K7AC 3I4NK 4BBSC 3H0GA 1C0AA 1ZYRA 4ZH4A 5CHPA 1I6HK 4QJVA 4A3CC 2ZJRS 1X31C 3GTPA 1TWCA 1VGXA 3A8IA 2JA6A 3S17K 3GEIA 1JVIA 3HXAA 4C3IK 4PAAA 3AQOA 1WCMA 2V6UA 4KM9A 4C3HC 4Y52C 2PHCB 4WF9S 2WAQL 4X6AK 4WFAS 3TFIA 4A3BC 4A3MC 2RGRA 4GTEA 4YFNA 5TMFA 3GTQC 3DXJA 3GTGC 5JVHS 1EQRA 1WOPA 5M5XK 5IYCC 4BLBA 2R93K 2JA8C 1I3QK 4KB4A 1O26A 3H0GK 4A3LC 5JVOA 4OINA 1DCHA 5IP7C 4A3EK 5D4DA 1INNA 3FOEA 1J6XA 1EK8A 2D6FC 1V5VA 2NVXC 3CQZK 2E2HK 1USOA 1R9TA 1HI9A 2L3UA 3I4NC 1FEUA 1I50C 2NVQK 1R9TK 3CQZA 2L5NA 3H0GC 3GIRA 4Y52K 3K7AK 1WSRA 4XSZA 3S1QC 5IYDC 1I50A 3S16C 4BXXK 3GTKA 4WFNS 1ZXOA 3M4OC 1USMA 1O2AA 1TWFC 3ERED 5EGEA 3GTQK 3G4AA 1B4AA 4KDDA 1VRQC 5IP9C 2PMZD 4A3EC 5IP7K 2E2HC 4WFBS 4MQ9A 3HOVC 4NOIA 4LQYA 3LPXA 4A3KC 3HOXC 1IL2A 2XCQA 3OPFA 4KMAA 1TWCK 2R7ZA 4KASA 4BY1K 4OIOA 4KMUA 5IYBK 3S2DK 5IYDK 1XZPB 1Y1WK 4YFKA 3VA7A 4KMHA 3PO3C 4C3JK 4G0VA 5C3EK 4AYBL 1GE9A 4GTAA 3GTOK 2PA8D 3L4JA 1ISEA 5IOQA 4U67S 1VLOA 2JA6C 3EQLA 4BY7C 1BJTA 1TWAK 3JSTA 5C3EC 3GTKK 4KN4A 1WQGA 2CW0A 2WAQD 5IP9K 2BE5A 1IS1A 2YU9K 3BP3A 3GEEA 4WCES 2Y0SD 4LJZA 2XCOA 5HQHA 4G7HA 1Y1WC 3CAGA 2ZJQS 4IOAS 3GTMK 3GTKC 2FQOA 3GEHA 1XZPA 3L4KA 1G51A 5HL8A 1DCOA 2W7VA 4OIQA 1ZQ1C 3FOFA 1WORA 1TWGC 1JOEA 1YNJA 1WOSA 5L46A 1BGWA 3SZYA 3FKIC 3S1RK 4BY7K 3GTQA 2A6EA 2KXYA 3GTLC 3T02A 5TJ3A 4YG2A 2RH6A 4A3GC 1XZQA 4QIWD 2Y3PA 4O2DA 4XSXA 5EGHA 3AD8C 1ZBSA 3RZDK 4DDQA 1RU0A 3AH5A 3BUEA 1TWFA 1WOOA 3TFHA 4A3FC 5C4XC 1DCPA 3S1QK 2VUMC 5HL7S 3PIPS 1O28A 3I4MC 2ZFZA 2V6TA 4A3CK 3M3YC 4ILDA 3IPJA 3QX3A 3HOVK 4KN7A 4C45A 1JQWA 3HOWC 1XXAA 1F7UA 4WJ3M 1B4BA 4Y7NC 2GAGC 2GSNA 4G7OA 1XPPA 5IOSA 4A3DC 2A69A 1PJ6A 5M3MK 5DM6S 2JA7K 1IBAA 2YU9A 2R93A 3FKIA 1XZQB 3M4OK 3G4CA 3HKZL 1ZVUA 5C4XK 2JA7A 4A3JC 1TWGA 1IQ0A 4G0WA 4C3HK 3TFJA 4A3LK 4FM9A 1O2BA 2P5MA 1HQMA 2R7ZK 1BDFA 3A8KA 3CQZC 3MMLB 1EI6A 4A3IK 4P9SA 2O5IA 2CFAB 2GAHC 4KATA 4RMFA 3LAPA 1UV7A 4A3MK 4FZBA 3BP8C 3S17C 4M1XA 1YNNA 2B63K 4JK1A 1WSVA 2JA8K 5M5YK 5TMCA 4BXXC 3FHZA 4A3DK 2B63A 4PABA 3OEPA 2Y0SL 3AQPA 4C2MK 3S2HK 1O29A 5C44C 3RZOC 2NVQC 1I50K 1XXCA 4BY1C 2JA5C 3S15K 4GTCA 3HOYC 3GDZA 5CJ9A 4A93K 1TWHC 5C4JK 4LLGA 4QIWL 1Y1VC 1K83K 4GTDA 3LYWA 4GFQA 3GTGA 1O25A 2E2IC 3S0XA 3GTMA 3S1MK 1F93A 2NVTC 3GTJK 2VUMK 2KPUA 3T00A 4KB2A 1TWHK 3AD7C 3DLLS 1PJ7A 3GTLA 4BLAA 3PO2C 2R92A 3GTPC 4BBRC 4KAWX 1I6VA 4AYBD 1TWGK 4IOCS 3PIOS 2NVYK 1WQHA 4GTLA 4C2MC 5JFEA 3PO3K 3M3YK 1SMYA 2KQ1A 2JA6K 3GTPK 1IW7A 2A68A 1Y1WA 4GTBA 4Q5SA 3S14C 2KWAA 4P5AA 4A93C 1WCMC 3S1NC 5IYBC 2E2IK 4KMDA 5FJ8K 3V4GA 3TTGA 2NVTK 3S2HC 4KARA 4P5BA 2NVXA 2R92C 2E2HA 3CF5S 3GTJC 4BKWA 3N0CA 3NUHA 1SFOC 1YCLA 1SFOA 2NVXK 1F9NA 1TWHA 2WB1D 4G7ZA 1TWFK 3GTJA 3HOUC 2GSUA 2E2JC 4BBRK 5C44K 3RZOK 2O5JA 2GSOA 1K83A 3OREA 4GT9A 4GZYA 1PJ5A 3S2DC 1J6VA 4WJ4A 1DD5A 5M5WK 5JVGS 3GSIA 3S16K 1WCMK 4OIRA 3A8JA 2NVYA 5IOTA
chains in the Genus database with same CATH topology
4KN4A 4BXXC 2CW0A 2WAQD 3S1MC 5IP9K 4A3CC 2BE5A 4A3DK 3GTKK 2YU9K 3I4MK 4Y7NK 2Y0SD 3S17K 4LJZA 2Y0SL 4C2MK 3S2HK 1SFOK 4G7HA 5C44C 2R7ZC 1Y1WC 3RZOC 4C3IK 4MEXA 2NVQC 1I50K 4BY1C 2JA5C 3S15K 3GTMK 3GTKC 4C3HC 3HOYC 4Y52C 4A93K 2PA8L 4X6AC 1TWHC 5C4JK 4A3JK 4LLGA 4A3FK 4QIWL 1Y1VC 2WAQL 4X6AK 1K83K 3S16K 4A3BC 4A3MC 2WB1L 4YFNA 4OIQA 5TMFA 3GTQC 1I3QC 3DXJA 3GTGC 2E2IC 5M5XK 4XLNA 4A3BK 1TWGC 3S1MK 5IYCC 2R93K 2JA8C 3GTJK 2NVTC 1YNJA 1I3QK 2VUMK 3GTGK 2E2JK 2A6HA 3FKIC 1TWHK 3H0GK 3S1RK 4BY7K 4A3LC 4OINA 5IP7C 4A3EK 2A6EA 5D4DA 3GTLC 3HOWK 4YG2A 2NVXC 3PO2C 4A3GC 3CQZK 4QIWD 2YU9C 2E2HK 1R9TC 1I6HC 4XSXA 4QJVB 5M3FK 3RZDK 4YFXA 3I4NC 1I50C 4A3IC 2NVQK 1R9TK 3GTPC 4BBRC 1K83C 3H0GC 3S1RC 4Q4ZA 4Y52K 3K7AK 3HOUK 1I6VA 4XSZA 2NVYC 3S1QC 4A3FC 5C4XC 4AYBD 5IYDC 1TWGK 3S16C 4BXXK 2NVYK 2R92K 2VUMC 4C2MC 2JA5K 3S1QK 3PO3K 3RZDC 3M3YK 1SMYA 3M4OC 3I4MC 1TWFC 2JA6K 3HOZK 4BBSK 3S14K 3GTPK 1IW7A 2A68A 3HKZD 3GTQK 4A3CK 3M3YC 4Q5SA 3S14C 3H3VL 5IP9C 3GTMC 4OIPA 3FKIK 4C3JC 3HOVK 3S1NK 4C3IC 4MEYA 4KN7A 4A93C 2PMZL 5FLMK 2PMZD 4A3EC 5IP7K 2E2HC 4A3GK 1WCMC 4MQ9A 3HOVC 5IYBC 3HOWC 3S1NC 4A3KK 2B63C 2E2IK 4Y7NC 5FJ8K 4NOIA 1TWCC 4G7OA 5C4JC 1XPPA 2NVTK 3S2HC 4A3KC 3HOXC 3GTOC 4A3DC 2A69A 5M3MK 1Y1VK 1TWCK 2JA7K 2R92C 2PPBA 4BY1K 3GTJC 4OIOA 1TWAC 3M4OK 5C4XK 3HKZL 1SFOC 5FLMC 4KMUA 2NVXK 4LK1A 4A3JC 5IYBK 3S2DK 5IYDK 3H3VD 4XLPA 1Y1WK 2WB1D 4YFKA 4C3HK 3HOYK 4G7ZA 1TWFK 4A3LK 2R93C 5IYCK 3HOUC 3S15C 3WODA 3PO3C 4C3JK 2E2JC 4BBRK 1HQMA 2JA7C 4LK0A 3HOZC 5C3EK 1BDFA 5C44K 2R7ZK 4AYBL 3RZOK 3CQZC 2O5JA 4A3IK 3PO2K 2O5IA 4A3MK 4GZYA 3HOXK 3GTOK 3S2DC 3S17C 2PA8D 3GTLK 1I6HK 5M5WK 1YNNA 3K7AC 2B63K 2JA6C 4JK1A 4BBSC 2JA8K 3I4NK 1WCMK 3EQLA 4BY7C 1ZYRA 1TWAK 4ZH4A 4OIRA 5M5YK 5C3EC 5TMCA 4QJVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KN4 A;  4BXX C;  2CW0 A;  2WAQ D;  3S1M C;  5IP9 K;  4A3C C;  2BE5 A;  4A3D K;  3GTK K;  2YU9 K;  3I4M K;  4Y7N K;  2Y0S D;  3S17 K;  4LJZ A;  2Y0S L;  4C2M K;  3S2H K;  1SFO K;  4G7H A;  5C44 C;  2R7Z C;  1Y1W C;  3RZO C;  4C3I K;  4MEX A;  2NVQ C;  1I50 K;  4BY1 C;  2JA5 C;  3S15 K;  3GTM K;  3GTK C;  4C3H C;  3HOY C;  4Y52 C;  4A93 K;  2PA8 L;  4X6A C;  1TWH C;  5C4J K;  4A3J K;  4LLG A;  4A3F K;  4QIW L;  1Y1V C;  2WAQ L;  4X6A K;  1K83 K;  3S16 K;  4A3B C;  4A3M C;  2WB1 L;  4YFN A;  4OIQ A;  5TMF A;  3GTQ C;  1I3Q C;  3DXJ A;  3GTG C;  2E2I C;  5M5X K;  4XLN A;  4A3B K;  1TWG C;  3S1M K;  5IYC C;  2R93 K;  2JA8 C;  3GTJ K;  2NVT C;  1YNJ A;  1I3Q K;  2VUM K;  3GTG K;  2E2J K;  2A6H A;  3FKI C;  1TWH K;  3H0G K;  3S1R K;  4BY7 K;  4A3L C;  4OIN A;  5IP7 C;  4A3E K;  2A6E A;  5D4D A;  3GTL C;  3HOW K;  4YG2 A;  2NVX C;  3PO2 C;  4A3G C;  3CQZ K;  4QIW D;  2YU9 C;  2E2H K;  1R9T C;  1I6H C;  4XSX A;  4QJV B;  5M3F K;  3RZD K;  4YFX A;  3I4N C;  1I50 C;  4A3I C;  2NVQ K;  1R9T K;  3GTP C;  4BBR C;  1K83 C;  3H0G C;  3S1R C;  4Q4Z A;  4Y52 K;  3K7A K;  3HOU K;  1I6V A;  4XSZ A;  2NVY C;  3S1Q C;  4A3F C;  5C4X C;  4AYB D;  5IYD C;  1TWG K;  3S16 C;  4BXX K;  2NVY K;  2R92 K;  2VUM C;  4C2M C;  2JA5 K;  3S1Q K;  3PO3 K;  3RZD C;  3M3Y K;  1SMY A;  3M4O C;  3I4M C;  1TWF C;  2JA6 K;  3HOZ K;  4BBS K;  3S14 K;  3GTP K;  1IW7 A;  2A68 A;  3HKZ D;  3GTQ K;  4A3C K;  3M3Y C;  4Q5S A;  3S14 C;  3H3V L;  5IP9 C;  3GTM C;  4OIP A;  3FKI K;  4C3J C;  3HOV K;  3S1N K;  4C3I C;  4MEY A;  4KN7 A;  4A93 C;  2PMZ L;  5FLM K;  2PMZ D;  4A3E C;  5IP7 K;  2E2H C;  4A3G K;  1WCM C;  4MQ9 A;  3HOV C;  5IYB C;  3HOW C;  3S1N C;  4A3K K;  2B63 C;  2E2I K;  4Y7N C;  5FJ8 K;  4NOI A;  1TWC C;  4G7O A;  5C4J C;  1XPP A;  2NVT K;  3S2H C;  4A3K C;  3HOX C;  3GTO C;  4A3D C;  2A69 A;  5M3M K;  1Y1V K;  1TWC K;  2JA7 K;  2R92 C;  2PPB A;  4BY1 K;  3GTJ C;  4OIO A;  1TWA C;  3M4O K;  5C4X K;  3HKZ L;  1SFO C;  5FLM C;  4KMU A;  2NVX K;  4LK1 A;  4A3J C;  5IYB K;  3S2D K;  5IYD K;  3H3V D;  4XLP A;  1Y1W K;  2WB1 D;  4YFK A;  4C3H K;  3HOY K;  4G7Z A;  1TWF K;  4A3L K;  2R93 C;  5IYC K;  3HOU C;  3S15 C;  3WOD A;  3PO3 C;  4C3J K;  2E2J C;  4BBR K;  1HQM A;  2JA7 C;  4LK0 A;  3HOZ C;  5C3E K;  1BDF A;  5C44 K;  2R7Z K;  4AYB L;  3RZO K;  3CQZ C;  2O5J A;  4A3I K;  3PO2 K;  2O5I A;  4A3M K;  4GZY A;  3HOX K;  3GTO K;  3S2D C;  3S17 C;  2PA8 D;  3GTL K;  1I6H K;  5M5W K;  1YNN A;  3K7A C;  2B63 K;  2JA6 C;  4JK1 A;  4BBS C;  2JA8 K;  3I4N K;  1WCM K;  3EQL A;  4BY7 C;  1ZYR A;  1TWA K;  4ZH4 A;  4OIR A;  5M5Y K;  5C3E C;  5TMC A;  4QJV A; 
#chains in the Genus database with same CATH topology
 2EBB A;  2CFA A;  3S1M C;  4KM8 A;  2P8T A;  3I4M K;  4Y7N K;  3GTO A;  3Q3Q A;  1SFO K;  2R7Z C;  1VH2 A;  2JH3 A;  4MEX A;  4KC6 A;  1WIH A;  3ADA C;  2PA8 L;  4X6A C;  4A3J K;  4A3F K;  2WB1 L;  1WQF A;  1J98 A;  1I3Q A;  1I3Q C;  1L0W A;  4XLN A;  4A3B K;  1VJE A;  3GTG K;  2E2J K;  2A6H A;  1KQ4 A;  1TWA A;  1F7V A;  1EFW A;  3HOW K;  4LR2 A;  2YU9 C;  1R9T C;  1I6H C;  4QJV B;  3N0B A;  5M3F K;  1O2F B;  4YFX A;  4A3I C;  2ZUE A;  1K83 C;  3S1R C;  4Q4Z A;  4J3N A;  1EH1 A;  3HOU K;  2XCR B;  2NVY C;  5IOR A;  1YX2 A;  2R92 K;  2FQT A;  2JA5 K;  3RZD C;  4LOW A;  3T01 A;  4BBS K;  3HOZ K;  3S14 K;  2V6S A;  3HKZ D;  3LAJ A;  5DM7 S;  1O24 A;  2JA5 A;  3H3V L;  2VUM A;  1BS2 A;  3GTM C;  4OIP A;  2E2I A;  3FKI K;  4C3J C;  3S1N K;  1XXB A;  4C3I C;  4MEY A;  2PMZ L;  3SZZ A;  4AH6 A;  5FLM K;  4A3G K;  1Y1V A;  4A3K K;  2B63 C;  1TWC C;  5C4J C;  3GTO C;  4WIL A;  1Y1V K;  3AD9 C;  2ZJP S;  2PPB A;  1TWA C;  4GTF A;  5FLM C;  3N3Y A;  4LK1 A;  3H3V D;  4XLP A;  2ZUF A;  1IE0 A;  3HOY K;  1J6W A;  2R93 C;  5IYC K;  3S15 C;  3WOD A;  5E68 A;  2JA7 C;  4LK0 A;  3HOZ C;  4G0U A;  1AB4 A;  3PO2 K;  4XCH A;  4IO9 S;  3HOX K;  3GTL K;  1O27 A;  3K7A C;  3I4N K;  4BBS C;  3H0G A;  1C0A A;  1ZYR A;  4ZH4 A;  5CHP A;  1I6H K;  4QJV A;  4A3C C;  2ZJR S;  1X31 C;  3GTP A;  1TWC A;  1VGX A;  3A8I A;  2JA6 A;  3S17 K;  3GEI A;  1JVI A;  3HXA A;  4C3I K;  4PAA A;  3AQO A;  1WCM A;  2V6U A;  4KM9 A;  4C3H C;  4Y52 C;  2PHC B;  4WF9 S;  2WAQ L;  4X6A K;  4WFA S;  3TFI A;  4A3B C;  4A3M C;  2RGR A;  4GTE A;  4YFN A;  5TMF A;  3GTQ C;  3DXJ A;  3GTG C;  5JVH S;  1EQR A;  1WOP A;  5M5X K;  5IYC C;  4BLB A;  2R93 K;  2JA8 C;  1I3Q K;  4KB4 A;  1O26 A;  3H0G K;  4A3L C;  5JVO A;  4OIN A;  1DCH A;  5IP7 C;  4A3E K;  5D4D A;  1INN A;  3FOE A;  1J6X A;  1EK8 A;  2D6F C;  1V5V A;  2NVX C;  3CQZ K;  2E2H K;  1USO A;  1R9T A;  1HI9 A;  2L3U A;  3I4N C;  1FEU A;  1I50 C;  2NVQ K;  1R9T K;  3CQZ A;  2L5N A;  3H0G C;  3GIR A;  4Y52 K;  3K7A K;  1WSR A;  4XSZ A;  3S1Q C;  5IYD C;  1I50 A;  3S16 C;  4BXX K;  3GTK A;  4WFN S;  1ZXO A;  3M4O C;  1USM A;  1O2A A;  1TWF C;  3ERE D;  5EGE A;  3GTQ K;  3G4A A;  1B4A A;  4KDD A;  1VRQ C;  5IP9 C;  2PMZ D;  4A3E C;  5IP7 K;  2E2H C;  4WFB S;  4MQ9 A;  3HOV C;  4NOI A;  4LQY A;  3LPX A;  4A3K C;  3HOX C;  1IL2 A;  2XCQ A;  3OPF A;  4KMA A;  1TWC K;  2R7Z A;  4KAS A;  4BY1 K;  4OIO A;  4KMU A;  5IYB K;  3S2D K;  5IYD K;  1XZP B;  1Y1W K;  4YFK A;  3VA7 A;  4KMH A;  3PO3 C;  4C3J K;  4G0V A;  5C3E K;  4AYB L;  1GE9 A;  4GTA A;  3GTO K;  2PA8 D;  3L4J A;  1ISE A;  5IOQ A;  4U67 S;  1VLO A;  2JA6 C;  3EQL A;  4BY7 C;  1BJT A;  1TWA K;  3JST A;  5C3E C;  3GTK K;  4KN4 A;  1WQG A;  2CW0 A;  2WAQ D;  5IP9 K;  2BE5 A;  1IS1 A;  2YU9 K;  3BP3 A;  3GEE A;  4WCE S;  2Y0S D;  4LJZ A;  2XCO A;  5HQH A;  4G7H A;  1Y1W C;  3CAG A;  2ZJQ S;  4IOA S;  3GTM K;  3GTK C;  2FQO A;  3GEH A;  1XZP A;  3L4K A;  1G51 A;  5HL8 A;  1DCO A;  2W7V A;  4OIQ A;  1ZQ1 C;  3FOF A;  1WOR A;  1TWG C;  1JOE A;  1YNJ A;  1WOS A;  5L46 A;  1BGW A;  3SZY A;  3FKI C;  3S1R K;  4BY7 K;  3GTQ A;  2A6E A;  2KXY A;  3GTL C;  3T02 A;  5TJ3 A;  4YG2 A;  2RH6 A;  4A3G C;  1XZQ A;  4QIW D;  2Y3P A;  4O2D A;  4XSX A;  5EGH A;  3AD8 C;  1ZBS A;  3RZD K;  4DDQ A;  1RU0 A;  3AH5 A;  3BUE A;  1TWF A;  1WOO A;  3TFH A;  4A3F C;  5C4X C;  1DCP A;  3S1Q K;  2VUM C;  5HL7 S;  3PIP S;  1O28 A;  3I4M C;  2ZFZ A;  2V6T A;  4A3C K;  3M3Y C;  4ILD A;  3IPJ A;  3QX3 A;  3HOV K;  4KN7 A;  4C45 A;  1JQW A;  3HOW C;  1XXA A;  1F7U A;  4WJ3 M;  1B4B A;  4Y7N C;  2GAG C;  2GSN A;  4G7O A;  1XPP A;  5IOS A;  4A3D C;  2A69 A;  1PJ6 A;  5M3M K;  5DM6 S;  2JA7 K;  1IBA A;  2YU9 A;  2R93 A;  3FKI A;  1XZQ B;  3M4O K;  3G4C A;  3HKZ L;  1ZVU A;  5C4X K;  2JA7 A;  4A3J C;  1TWG A;  1IQ0 A;  4G0W A;  4C3H K;  3TFJ A;  4A3L K;  4FM9 A;  1O2B A;  2P5M A;  1HQM A;  2R7Z K;  1BDF A;  3A8K A;  3CQZ C;  3MML B;  1EI6 A;  4A3I K;  4P9S A;  2O5I A;  2CFA B;  2GAH C;  4KAT A;  4RMF A;  3LAP A;  1UV7 A;  4A3M K;  4FZB A;  3BP8 C;  3S17 C;  4M1X A;  1YNN A;  2B63 K;  4JK1 A;  1WSV A;  2JA8 K;  5M5Y K;  5TMC A;  4BXX C;  3FHZ A;  4A3D K;  2B63 A;  4PAB A;  3OEP A;  2Y0S L;  3AQP A;  4C2M K;  3S2H K;  1O29 A;  5C44 C;  3RZO C;  2NVQ C;  1I50 K;  1XXC A;  4BY1 C;  2JA5 C;  3S15 K;  4GTC A;  3HOY C;  3GDZ A;  5CJ9 A;  4A93 K;  1TWH C;  5C4J K;  4LLG A;  4QIW L;  1Y1V C;  1K83 K;  4GTD A;  3LYW A;  4GFQ A;  3GTG A;  1O25 A;  2E2I C;  3S0X A;  3GTM A;  3S1M K;  1F93 A;  2NVT C;  3GTJ K;  2VUM K;  2KPU A;  3T00 A;  4KB2 A;  1TWH K;  3AD7 C;  3DLL S;  1PJ7 A;  3GTL A;  4BLA A;  3PO2 C;  2R92 A;  3GTP C;  4BBR C;  4KAW X;  1I6V A;  4AYB D;  1TWG K;  4IOC S;  3PIO S;  2NVY K;  1WQH A;  4GTL A;  4C2M C;  5JFE A;  3PO3 K;  3M3Y K;  1SMY A;  2KQ1 A;  2JA6 K;  3GTP K;  1IW7 A;  2A68 A;  1Y1W A;  4GTB A;  4Q5S A;  3S14 C;  2KWA A;  4P5A A;  4A93 C;  1WCM C;  3S1N C;  5IYB C;  2E2I K;  4KMD A;  5FJ8 K;  3V4G A;  3TTG A;  2NVT K;  3S2H C;  4KAR A;  4P5B A;  2NVX A;  2R92 C;  2E2H A;  3CF5 S;  3GTJ C;  4BKW A;  3N0C A;  3NUH A;  1SFO C;  1YCL A;  1SFO A;  2NVX K;  1F9N A;  1TWH A;  2WB1 D;  4G7Z A;  1TWF K;  3GTJ A;  3HOU C;  2GSU A;  2E2J C;  4BBR K;  5C44 K;  3RZO K;  2O5J A;  2GSO A;  1K83 A;  3ORE A;  4GT9 A;  4GZY A;  1PJ5 A;  3S2D C;  1J6V A;  4WJ4 A;  1DD5 A;  5M5W K;  5JVG S;  3GSI A;  3S16 K;  1WCM K;  4OIR A;  3A8J A;  2NVY A;  5IOT A; 
#chains in the Genus database with same CATH homology
 4KN4 A;  4BXX C;  2CW0 A;  2WAQ D;  3S1M C;  5IP9 K;  4A3C C;  2BE5 A;  4A3D K;  3GTK K;  2YU9 K;  3I4M K;  4Y7N K;  2Y0S D;  3S17 K;  4LJZ A;  2Y0S L;  4C2M K;  3S2H K;  1SFO K;  4G7H A;  5C44 C;  2R7Z C;  1Y1W C;  3RZO C;  4C3I K;  4MEX A;  2NVQ C;  1I50 K;  4BY1 C;  2JA5 C;  3S15 K;  3GTM K;  3GTK C;  4C3H C;  3HOY C;  4Y52 C;  4A93 K;  2PA8 L;  4X6A C;  1TWH C;  5C4J K;  4A3J K;  4LLG A;  4A3F K;  4QIW L;  1Y1V C;  2WAQ L;  4X6A K;  1K83 K;  3S16 K;  4A3B C;  4A3M C;  2WB1 L;  4YFN A;  4OIQ A;  5TMF A;  3GTQ C;  1I3Q C;  3DXJ A;  3GTG C;  2E2I C;  5M5X K;  4XLN A;  4A3B K;  1TWG C;  3S1M K;  5IYC C;  2R93 K;  2JA8 C;  3GTJ K;  2NVT C;  1YNJ A;  1I3Q K;  2VUM K;  3GTG K;  2E2J K;  2A6H A;  3FKI C;  1TWH K;  3H0G K;  3S1R K;  4BY7 K;  4A3L C;  4OIN A;  5IP7 C;  4A3E K;  2A6E A;  5D4D A;  3GTL C;  3HOW K;  4YG2 A;  2NVX C;  3PO2 C;  4A3G C;  3CQZ K;  4QIW D;  2YU9 C;  2E2H K;  1R9T C;  1I6H C;  4XSX A;  4QJV B;  5M3F K;  3RZD K;  4YFX A;  3I4N C;  1I50 C;  4A3I C;  2NVQ K;  1R9T K;  3GTP C;  4BBR C;  1K83 C;  3H0G C;  3S1R C;  4Q4Z A;  4Y52 K;  3K7A K;  3HOU K;  1I6V A;  4XSZ A;  2NVY C;  3S1Q C;  4A3F C;  5C4X C;  4AYB D;  5IYD C;  1TWG K;  3S16 C;  4BXX K;  2NVY K;  2R92 K;  2VUM C;  4C2M C;  2JA5 K;  3S1Q K;  3PO3 K;  3RZD C;  3M3Y K;  1SMY A;  3M4O C;  3I4M C;  1TWF C;  2JA6 K;  3HOZ K;  4BBS K;  3S14 K;  3GTP K;  1IW7 A;  2A68 A;  3HKZ D;  3GTQ K;  4A3C K;  3M3Y C;  4Q5S A;  3S14 C;  3H3V L;  5IP9 C;  3GTM C;  4OIP A;  3FKI K;  4C3J C;  3HOV K;  3S1N K;  4C3I C;  4MEY A;  4KN7 A;  4A93 C;  2PMZ L;  5FLM K;  2PMZ D;  4A3E C;  5IP7 K;  2E2H C;  4A3G K;  1WCM C;  4MQ9 A;  3HOV C;  5IYB C;  3HOW C;  3S1N C;  4A3K K;  2B63 C;  2E2I K;  4Y7N C;  5FJ8 K;  4NOI A;  1TWC C;  4G7O A;  5C4J C;  1XPP A;  2NVT K;  3S2H C;  4A3K C;  3HOX C;  3GTO C;  4A3D C;  2A69 A;  5M3M K;  1Y1V K;  1TWC K;  2JA7 K;  2R92 C;  2PPB A;  4BY1 K;  3GTJ C;  4OIO A;  1TWA C;  3M4O K;  5C4X K;  3HKZ L;  1SFO C;  5FLM C;  4KMU A;  2NVX K;  4LK1 A;  4A3J C;  5IYB K;  3S2D K;  5IYD K;  3H3V D;  4XLP A;  1Y1W K;  2WB1 D;  4YFK A;  4C3H K;  3HOY K;  4G7Z A;  1TWF K;  4A3L K;  2R93 C;  5IYC K;  3HOU C;  3S15 C;  3WOD A;  3PO3 C;  4C3J K;  2E2J C;  4BBR K;  1HQM A;  2JA7 C;  4LK0 A;  3HOZ C;  5C3E K;  1BDF A;  5C44 K;  2R7Z K;  4AYB L;  3RZO K;  3CQZ C;  2O5J A;  4A3I K;  3PO2 K;  2O5I A;  4A3M K;  4GZY A;  3HOX K;  3GTO K;  3S2D C;  3S17 C;  2PA8 D;  3GTL K;  1I6H K;  5M5W K;  1YNN A;  3K7A C;  2B63 K;  2JA6 C;  4JK1 A;  4BBS C;  2JA8 K;  3I4N K;  1WCM K;  3EQL A;  4BY7 C;  1ZYR A;  1TWA K;  4ZH4 A;  4OIR A;  5M5Y K;  5C3E C;  5TMC A;  4QJV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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