3HOUC

Complete rna polymerase ii elongation complex i with a t-u mismatch
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 50
structure length 266
sequence length 266
chains with identical sequence O
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3houC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3houC01
4GZYA 3RZDK 2E2JK 2E2IK 2NVXC 3H3VD 4BY1C 2O5IA 5C4XK 1Y1WK 3PO2K 5C3EK 4Y7NC 5IYDK 2B63C 1TWGK 3PO3C 4YFNA 4C3IK 1IW7A 1Y1WC 4Q4ZA 2YU9C 4C3JK 3DXJA 3PO3K 2PA8L 1TWHC 2JA5C 1SFOC 3S14C 2R93C 4KMUA 5IYCC 3S1QC 3RZDC 2PA8D 2E2JC 3S1MK 4A3EK 4A3KC 3GTMC 5M3MK 2R92K 2NVTK 1Y1VK 2PMZL 1I3QK 4XSXA 4YFKA 5IYDC 3S17K 3I4MK 4A3BK 2NVTC 5M5XK 4A3EC 4LK0A 1I50K 2A6EA 4A3LK 2NVYK 3S2DC 3H3VL 1BDFA 3HKZD 4A3CC 3HOYK 3M3YK 1R9TC 4A3JK 1I6VA 2NVYC 3HOYC 3M3YC 4A3GC 4C3HK 5M5YK 3HOUC 2JA6K 2VUMC 4A3JC 1R9TK 2JA7K 2WB1D 4AYBL 4XLNA 4Y7NK 2O5JA 1TWAC 2R7ZC 2R92C 3I4NK 2JA6C 3HOUK 4G7ZA 3FKIK 3S17C 3GTPK 4OIPA 4A3FK 3EQLA 4BY1K 4YFXA 3M4OC 4A3FC 4QIWD 4A93C 3S15C 4OIOA 4ZH4A 3S2HK 1I3QC 4A3BC 1I50C 4A3LC 5FJ8K 4C2MK 1TWFC 4MEYA 3I4NC 4MEXA 4BY7C 2E2IC 4BBSC 3HOXK 3S1QK 1K83K 4A3MK 5C3EC 1WCMK 2VUMK 1TWCC 4BBRK 4MQ9A 5C4JK 4A3KK 3GTMK 2PPBA 3HKZL 4C3HC 4A3GK 4OINA 4BXXC 3HOZK 1WCMC 1XPPA 4X6AK 1K83C 4A3MC 5C44C 3WODA 3CQZK 3FKIC 4Y52C 4KN7A 1TWFK 1TWAK 2R7ZK 4XSZA 2Y0SL 3H0GK 4LLGA 3RZOK 3M4OK 5IP7K 4A3DK 4NOIA 3RZOC 4BBSK 4YG2A 3H0GC 5M3FK 3K7AK 2Y0SD 3S16C 1TWHK 2JA5K 3S14K 2NVQC 5IYBK 3CQZC 4QJVB 5TMFA 1SMYA 2JA8C 4LK1A 3S16K 4KN4A 4G7OA 4C2MC 4JK1A 5FLMC 1I6HC 2WAQL 3GTJK 5C4JC 4QIWL 4G7HA 2CW0A 5IP9C 2JA7C 1HQMA 2NVQK 4OIQA 3HOZC 3HOWK 3GTJC 5TMCA 2NVXK 5FLMK 3GTLC 3HOVK 1I6HK 3GTGK 4Y52K 1YNNA 5IP9K 4XLPA 3GTOC 5IYBC 2A68A 5C44K 5D4DA 4BY7K 3GTGC 3K7AC 2E2HC 3HOVC 3GTKC 4Q5SA 4AYBD 4C3IC 2WB1L 3GTLK 3GTQK 3S1NC 4BBRC 1TWCK 2R93K 4A93K 3S1MC 3S15K 3PO2C 5C4XC 3S1RC 4A3CK 4BXXK 3S1NK 1ZYRA 2A6HA 3GTQC 3GTKK 5M5WK 5IYCK 3S1RK 2JA8K 2WAQD 3I4MC 3HOXC 1TWGC 2B63K 3GTOK 2BE5A 4A3IC 4OIRA 1Y1VC 4LJZA 2A69A 4C3JC 2E2HK 2YU9K 2PMZD 4A3IK 3HOWC 3S2HC 5IP7C 4A3DC 4X6AC 4QJVA 1YNJA 1SFOK 3GTPC 3S2DK
chains in the Genus database with same CATH superfamily
4KAWX 1RU0A 2E2IK 4BY1C 1Y1WK 4Y7NC 4P5BA 4XCHA 2YU9C 1J6VA 2L5NA 3PO3K 5IORA 1DD5A 4KMUA 2JH3A 1TWAA 2E2JC 4LR2A 4A3KC 3GTMC 5DM6S 1JQWA 2VUMA 3S17K 1EK8A 5M5XK 2JA7A 2KWAA 4LK0A 2A6EA 3LAJA 3HOYK 3S2DC 1ZQ1C 3HKZD 1X31C 1VRQC 5TJ3A 2D6FC 3IPJA 2VUMC 4A3JC 4LQYA 1USOA 2WB1D 4Y7NK 3FHZA 2O5JA 3FOEA 2R7ZC 2R92C 3LAPA 4KDDA 2JA6C 1UV7A 3FKIK 4OIPA 4A3FK 4G0WA 3GIRA 1O27A 1PJ7A 5DM7S 1WCMA 4QIWD 2CFAA 4A93C 4OIOA 1I50C 1TWFC 4MEXA 3S1QK 5JVHS 4A3MK 5C3EC 1BGWA 1I50A 1O2AA 4A3KK 4MQ9A 3GTMK 3AD9C 4A3GK 1WIHA 1L0WA 4X6AK 4A3MC 3V4GA 3WODA 1JOEA 1XXCA 4KM9A 3S0XA 4Y52C 4P5AA 1JVIA 3RZOK 3M4OK 4A3DK 4BBSK 4KM8A 5M3FK 1IE0A 3BUEA 3K7AK 1O29A 3MMLB 3CQZC 4GTEA 2XCOA 4BLAA 5FLMC 1XXAA 2CFAB 1VJEA 1SFOA 2KXYA 2ZJQS 4QIWL 2ZJRS 1HQMA 2JA7C 4KARA 3GTOA 1IBAA 5TMCA 1O25A 5FLMK 1KQ4A 3GTGK 5IOSA 4XLPA 3GTOC 4J3NA 3GTGC 1TWHA 1WQHA 3L4JA 2WB1L 3S1NC 4BBRC 1TWCK 1F7VA 2R93K 3S1MC 4KC6A 1XZPA 1ZYRA 1WOSA 3GTQC 1F9NA 3L4KA 2JA8K 2WAQD 2Y3PA 1BS2A 2B63K 3AD8C 1Y1VC 4LJZA 3T02A 2YU9K 1WOOA 1WSVA 4A3DC 1FEUA 3GTPC 2GAHC 3ERED 2E2JK 4KMDA 2O5IA 5C4XK 3PO2K 5C3EK 4KB2A 5IYDK 1TWGK 3PO3C 4C3IK 4IOCS 1TWFA 3OREA 2JA5C 3S14C 2R93C 3S1QC 1WSRA 3N0BA 3CQZA 4A3BK 2RH6A 1XZPB 4FZBA 1VH2A 4DDQA 4WFAS 3H3VL 1BDFA 4A3CC 5IOTA 3A8IA 4A3JK 3GEEA 1I6VA 2NVYC 3M3YC 1ZBSA 2JA6K 1R9TK 2P5MA 4XLNA 4KMAA 5L46A 4G7ZA 3S17C 5EGHA 4KATA 4WFBS 3GTPK 3TTGA 1VLOA 3EQLA 1G51A 4M1XA 4A3LC 1AB4A 4FM9A 1O26A 3QX3A 3JSTA 1K83K 2VUMK 1TWCC 4BBRK 2PPBA 3HKZL 1K83C 3CQZK 3FKIC 3AQOA 3T01A 2R7ZK 4XSZA 1XXBA 2W7VA 3ADAC 1YX2A 4GT9A 3SZYA 1C0AA 2Y0SD 2NVQC 2NVYA 2ZUFA 3S16K 1I6HC 3GSIA 2E2HA 2NVQK 4WJ3M 2V6TA 3HOWK 2NVXK 1B4BA 1I6HK 4Y52K 1YNNA 5IYBC 2A68A 4KASA 2R93A 4BY7K 2E2HC 3GTQK 4AYBD 1DCOA 1BJTA 3LYWA 3OEPA 3S15K 4A3CK 2FQTA 3GTKK 5IYCK 3I4MC 3HOXC 1USMA 2BE5A 2A69A 1O28A 1IS1A 2V6UA 3S2DK 4GZYA 2NVXC 1TWCA 3GTLA 4Q4ZA 2PA8L 1TWHC 3GTGA 4AH6A 1ZVUA 2R7ZA 3RZDC 2PA8D 4A3EK 1INNA 3PIPS 1Y1VK 2PMZL 1I3QK 4XSXA 4YFKA 4GTLA 3TFHA 3GTJA 3AQPA 1R9TA 3SZZA 4A3EC 1I50K 4WILA 2NVYK 3M3YK 1IL2A 1DCPA 4PABA 3GDZA 1R9TC 4C3HK 1WQGA 2JA7K 5HL8A 1J6XA 1TWAC 3HOUK 3VA7A 4G0UA 4IOAS 3M4OC 1B4AA 2RGRA 3S2HK 4A3BC 1WQFA 4MEYA 3I4NC 4BY7C 3AD7C 3DLLS 4BBSC 3GEHA 1F7UA 3BP3A 1WCMK 5C4JK 5HL7S 4BXXC 3HOZK 1WCMC 1XPPA 4ILDA 3GTPA 5C44C 5JFEA 1TWFK 1WOPA 1O2BA 2Y0SL 1TWGA 4NOIA 4GTAA 4YG2A 3H0GC 3GTQA 2GSUA 3S16C 2JA5K 3S14K 3A8JA 5TMFA 2JA8C 4LK1A 5JVOA 4JK1A 2WAQL 3NUHA 2P8TA 4BLBA 3GTJK 4PAAA 2CW0A 4OIQA 3GTJC 3HOVK 2B63A 1HI9A 1ZXOA 4C45A 2PHCB 1O2FB 3G4AA 3K7AC 5JVGS 3HOVC 3GTKC 4Q5SA 4C3IC 4GTCA 3PO2C 5C4XC 3S1RC 4BXXK 1EFWA 3H0GA 3S1RK 2NVXA 1TWGC 4OIRA 2PMZD 3HOWC 3S2HC 1EI6A 4X6AC 1YNJA 3S1MK 3GTKA 1PJ5A 3CF5S 3RZDK 1XZQB 3H3VD 4GTBA 4KB4A 2GSNA 2B63C 1F93A 2FQOA 4O2DA 4YFNA 1IW7A 1Y1WC 3G4CA 2GAGC 4C3JK 3DXJA 3FOFA 4U67S 1SFOC 2XCQA 5IYCC 2ZJPS 4WF9S 3A8KA 4RMFA 3T00A 2KQ1A 1WORA 3OPFA 5M3MK 2R92K 2NVTK 1V5VA 5IYDC 3I4MK 2NVTC 1DCHA 3PIOS 2JA6A 4A3LK 3HOYC 4A3GC 5M5YK 2ZUEA 3HOUC 2L3UA 4AYBL 4GFQA 4BKWA 1XZQA 5CHPA 3I4NK 4P9SA 5EGEA 3FKIA 4BY1K 3LPXA 4YFXA 4WFNS 3GTMA 4A3FC 3GEIA 1J98A 4ZH4A 3CAGA 1I3QC 4WCES 5FJ8K 2EBBA 4C2MK 2E2IC 1GE9A 2E2IA 3HOXK 2ZFZA 1I3QA 1EQRA 1Y1VA 2R92A 4C3HC 1EH1A 4OINA 3BP8C 5CJ9A 4KN7A 1TWAK 3H0GK 4LLGA 5IP7K 5IOQA 3RZOC 1IQ0A 3HXAA 5HQHA 1TWHK 1PJ6A 5IYBK 4QJVB 3TFJA 3AH5A 4G0VA 1SMYA 4KN4A 4G7OA 4GTFA 4WJ4A 4C2MC 1O24A 5C4JC 4G7HA 5IP9C 4KMHA 3HOZC 3N0CA 2YU9A 3GTLC 2GSOA 2XCRB 4IO9S 3TFIA 2KPUA 5IP9K 3Q3QA 5C44K 5D4DA 2JA5A 3N3YA 2V6SA 3GTLK 1J6WA 4A93K 4LOWA 1Y1WA 3S1NK 2A6HA 5M5WK 4GTDA 3GTOK 4A3IC 4C3JC 2E2HK 4A3IK 5E68A 5IP7C 1ISEA 4QJVA 3S15C 1SFOK 1VGXA 1K83A 1YCLA
chains in the Genus database with same CATH topology
4GZYA 3RZDK 2E2JK 2E2IK 2NVXC 3H3VD 4BY1C 2O5IA 5C4XK 1Y1WK 3PO2K 5C3EK 4Y7NC 5IYDK 2B63C 1TWGK 3PO3C 4YFNA 4C3IK 1IW7A 1Y1WC 4Q4ZA 2YU9C 4C3JK 3DXJA 3PO3K 2PA8L 1TWHC 2JA5C 1SFOC 3S14C 2R93C 4KMUA 5IYCC 3S1QC 3RZDC 2PA8D 2E2JC 3S1MK 4A3EK 4A3KC 3GTMC 5M3MK 2R92K 2NVTK 1Y1VK 2PMZL 1I3QK 4XSXA 4YFKA 5IYDC 3S17K 3I4MK 4A3BK 2NVTC 5M5XK 4A3EC 4LK0A 1I50K 2A6EA 4A3LK 2NVYK 3S2DC 3H3VL 1BDFA 3HKZD 4A3CC 3HOYK 3M3YK 1R9TC 4A3JK 1I6VA 2NVYC 3HOYC 3M3YC 4A3GC 4C3HK 5M5YK 3HOUC 2JA6K 2VUMC 4A3JC 1R9TK 2JA7K 2WB1D 4AYBL 4XLNA 4Y7NK 2O5JA 1TWAC 2R7ZC 2R92C 3I4NK 2JA6C 3HOUK 4G7ZA 3FKIK 3S17C 3GTPK 4OIPA 4A3FK 3EQLA 4BY1K 4YFXA 3M4OC 4A3FC 4QIWD 4A93C 3S15C 4OIOA 4ZH4A 3S2HK 1I3QC 4A3BC 1I50C 4A3LC 5FJ8K 4C2MK 1TWFC 4MEYA 3I4NC 4MEXA 4BY7C 2E2IC 4BBSC 3HOXK 3S1QK 1K83K 4A3MK 5C3EC 1WCMK 2VUMK 1TWCC 4BBRK 4MQ9A 5C4JK 4A3KK 3GTMK 2PPBA 3HKZL 4C3HC 4A3GK 4OINA 4BXXC 3HOZK 1WCMC 1XPPA 4X6AK 1K83C 4A3MC 5C44C 3WODA 3CQZK 3FKIC 4Y52C 4KN7A 1TWFK 1TWAK 2R7ZK 4XSZA 2Y0SL 3H0GK 4LLGA 3RZOK 3M4OK 5IP7K 4A3DK 4NOIA 3RZOC 4BBSK 4YG2A 3H0GC 5M3FK 3K7AK 2Y0SD 3S16C 1TWHK 2JA5K 3S14K 2NVQC 5IYBK 3CQZC 4QJVB 5TMFA 1SMYA 2JA8C 4LK1A 3S16K 4KN4A 4G7OA 4C2MC 4JK1A 5FLMC 1I6HC 2WAQL 3GTJK 5C4JC 4QIWL 4G7HA 2CW0A 5IP9C 2JA7C 1HQMA 2NVQK 4OIQA 3HOZC 3HOWK 3GTJC 5TMCA 2NVXK 5FLMK 3GTLC 3HOVK 1I6HK 3GTGK 4Y52K 1YNNA 5IP9K 4XLPA 3GTOC 5IYBC 2A68A 5C44K 5D4DA 4BY7K 3GTGC 3K7AC 2E2HC 3HOVC 3GTKC 4Q5SA 4AYBD 4C3IC 2WB1L 3GTLK 3GTQK 3S1NC 4BBRC 1TWCK 2R93K 4A93K 3S1MC 3S15K 3PO2C 5C4XC 3S1RC 4A3CK 4BXXK 3S1NK 1ZYRA 2A6HA 3GTQC 3GTKK 5M5WK 5IYCK 3S1RK 2JA8K 2WAQD 3I4MC 3HOXC 1TWGC 2B63K 3GTOK 2BE5A 4A3IC 4OIRA 1Y1VC 4LJZA 2A69A 4C3JC 2E2HK 2YU9K 2PMZD 4A3IK 3HOWC 3S2HC 5IP7C 4A3DC 4X6AC 4QJVA 1YNJA 1SFOK 3GTPC 3S2DK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GZY A;  3RZD K;  2E2J K;  2E2I K;  2NVX C;  3H3V D;  4BY1 C;  2O5I A;  5C4X K;  1Y1W K;  3PO2 K;  5C3E K;  4Y7N C;  5IYD K;  2B63 C;  1TWG K;  3PO3 C;  4YFN A;  4C3I K;  1IW7 A;  1Y1W C;  4Q4Z A;  2YU9 C;  4C3J K;  3DXJ A;  3PO3 K;  2PA8 L;  1TWH C;  2JA5 C;  1SFO C;  3S14 C;  2R93 C;  4KMU A;  5IYC C;  3S1Q C;  3RZD C;  2PA8 D;  2E2J C;  3S1M K;  4A3E K;  4A3K C;  3GTM C;  5M3M K;  2R92 K;  2NVT K;  1Y1V K;  2PMZ L;  1I3Q K;  4XSX A;  4YFK A;  5IYD C;  3S17 K;  3I4M K;  4A3B K;  2NVT C;  5M5X K;  4A3E C;  4LK0 A;  1I50 K;  2A6E A;  4A3L K;  2NVY K;  3S2D C;  3H3V L;  1BDF A;  3HKZ D;  4A3C C;  3HOY K;  3M3Y K;  1R9T C;  4A3J K;  1I6V A;  2NVY C;  3HOY C;  3M3Y C;  4A3G C;  4C3H K;  5M5Y K;  3HOU C;  2JA6 K;  2VUM C;  4A3J C;  1R9T K;  2JA7 K;  2WB1 D;  4AYB L;  4XLN A;  4Y7N K;  2O5J A;  1TWA C;  2R7Z C;  2R92 C;  3I4N K;  2JA6 C;  3HOU K;  4G7Z A;  3FKI K;  3S17 C;  3GTP K;  4OIP A;  4A3F K;  3EQL A;  4BY1 K;  4YFX A;  3M4O C;  4A3F C;  4QIW D;  4A93 C;  3S15 C;  4OIO A;  4ZH4 A;  3S2H K;  1I3Q C;  4A3B C;  1I50 C;  4A3L C;  5FJ8 K;  4C2M K;  1TWF C;  4MEY A;  3I4N C;  4MEX A;  4BY7 C;  2E2I C;  4BBS C;  3HOX K;  3S1Q K;  1K83 K;  4A3M K;  5C3E C;  1WCM K;  2VUM K;  1TWC C;  4BBR K;  4MQ9 A;  5C4J K;  4A3K K;  3GTM K;  2PPB A;  3HKZ L;  4C3H C;  4A3G K;  4OIN A;  4BXX C;  3HOZ K;  1WCM C;  1XPP A;  4X6A K;  1K83 C;  4A3M C;  5C44 C;  3WOD A;  3CQZ K;  3FKI C;  4Y52 C;  4KN7 A;  1TWF K;  1TWA K;  2R7Z K;  4XSZ A;  2Y0S L;  3H0G K;  4LLG A;  3RZO K;  3M4O K;  5IP7 K;  4A3D K;  4NOI A;  3RZO C;  4BBS K;  4YG2 A;  3H0G C;  5M3F K;  3K7A K;  2Y0S D;  3S16 C;  1TWH K;  2JA5 K;  3S14 K;  2NVQ C;  5IYB K;  3CQZ C;  4QJV B;  5TMF A;  1SMY A;  2JA8 C;  4LK1 A;  3S16 K;  4KN4 A;  4G7O A;  4C2M C;  4JK1 A;  5FLM C;  1I6H C;  2WAQ L;  3GTJ K;  5C4J C;  4QIW L;  4G7H A;  2CW0 A;  5IP9 C;  2JA7 C;  1HQM A;  2NVQ K;  4OIQ A;  3HOZ C;  3HOW K;  3GTJ C;  5TMC A;  2NVX K;  5FLM K;  3GTL C;  3HOV K;  1I6H K;  3GTG K;  4Y52 K;  1YNN A;  5IP9 K;  4XLP A;  3GTO C;  5IYB C;  2A68 A;  5C44 K;  5D4D A;  4BY7 K;  3GTG C;  3K7A C;  2E2H C;  3HOV C;  3GTK C;  4Q5S A;  4AYB D;  4C3I C;  2WB1 L;  3GTL K;  3GTQ K;  3S1N C;  4BBR C;  1TWC K;  2R93 K;  4A93 K;  3S1M C;  3S15 K;  3PO2 C;  5C4X C;  3S1R C;  4A3C K;  4BXX K;  3S1N K;  1ZYR A;  2A6H A;  3GTQ C;  3GTK K;  5M5W K;  5IYC K;  3S1R K;  2JA8 K;  2WAQ D;  3I4M C;  3HOX C;  1TWG C;  2B63 K;  3GTO K;  2BE5 A;  4A3I C;  4OIR A;  1Y1V C;  4LJZ A;  2A69 A;  4C3J C;  2E2H K;  2YU9 K;  2PMZ D;  4A3I K;  3HOW C;  3S2H C;  5IP7 C;  4A3D C;  4X6A C;  4QJV A;  1YNJ A;  1SFO K;  3GTP C;  3S2D K; 
#chains in the Genus database with same CATH topology
 4KAW X;  1RU0 A;  2E2I K;  4BY1 C;  1Y1W K;  4Y7N C;  4P5B A;  4XCH A;  2YU9 C;  1J6V A;  2L5N A;  3PO3 K;  5IOR A;  1DD5 A;  4KMU A;  2JH3 A;  1TWA A;  2E2J C;  4LR2 A;  4A3K C;  3GTM C;  5DM6 S;  1JQW A;  2VUM A;  3S17 K;  1EK8 A;  5M5X K;  2JA7 A;  2KWA A;  4LK0 A;  2A6E A;  3LAJ A;  3HOY K;  3S2D C;  1ZQ1 C;  3HKZ D;  1X31 C;  1VRQ C;  5TJ3 A;  2D6F C;  3IPJ A;  2VUM C;  4A3J C;  4LQY A;  1USO A;  2WB1 D;  4Y7N K;  3FHZ A;  2O5J A;  3FOE A;  2R7Z C;  2R92 C;  3LAP A;  4KDD A;  2JA6 C;  1UV7 A;  3FKI K;  4OIP A;  4A3F K;  4G0W A;  3GIR A;  1O27 A;  1PJ7 A;  5DM7 S;  1WCM A;  4QIW D;  2CFA A;  4A93 C;  4OIO A;  1I50 C;  1TWF C;  4MEX A;  3S1Q K;  5JVH S;  4A3M K;  5C3E C;  1BGW A;  1I50 A;  1O2A A;  4A3K K;  4MQ9 A;  3GTM K;  3AD9 C;  4A3G K;  1WIH A;  1L0W A;  4X6A K;  4A3M C;  3V4G A;  3WOD A;  1JOE A;  1XXC A;  4KM9 A;  3S0X A;  4Y52 C;  4P5A A;  1JVI A;  3RZO K;  3M4O K;  4A3D K;  4BBS K;  4KM8 A;  5M3F K;  1IE0 A;  3BUE A;  3K7A K;  1O29 A;  3MML B;  3CQZ C;  4GTE A;  2XCO A;  4BLA A;  5FLM C;  1XXA A;  2CFA B;  1VJE A;  1SFO A;  2KXY A;  2ZJQ S;  4QIW L;  2ZJR S;  1HQM A;  2JA7 C;  4KAR A;  3GTO A;  1IBA A;  5TMC A;  1O25 A;  5FLM K;  1KQ4 A;  3GTG K;  5IOS A;  4XLP A;  3GTO C;  4J3N A;  3GTG C;  1TWH A;  1WQH A;  3L4J A;  2WB1 L;  3S1N C;  4BBR C;  1TWC K;  1F7V A;  2R93 K;  3S1M C;  4KC6 A;  1XZP A;  1ZYR A;  1WOS A;  3GTQ C;  1F9N A;  3L4K A;  2JA8 K;  2WAQ D;  2Y3P A;  1BS2 A;  2B63 K;  3AD8 C;  1Y1V C;  4LJZ A;  3T02 A;  2YU9 K;  1WOO A;  1WSV A;  4A3D C;  1FEU A;  3GTP C;  2GAH C;  3ERE D;  2E2J K;  4KMD A;  2O5I A;  5C4X K;  3PO2 K;  5C3E K;  4KB2 A;  5IYD K;  1TWG K;  3PO3 C;  4C3I K;  4IOC S;  1TWF A;  3ORE A;  2JA5 C;  3S14 C;  2R93 C;  3S1Q C;  1WSR A;  3N0B A;  3CQZ A;  4A3B K;  2RH6 A;  1XZP B;  4FZB A;  1VH2 A;  4DDQ A;  4WFA S;  3H3V L;  1BDF A;  4A3C C;  5IOT A;  3A8I A;  4A3J K;  3GEE A;  1I6V A;  2NVY C;  3M3Y C;  1ZBS A;  2JA6 K;  1R9T K;  2P5M A;  4XLN A;  4KMA A;  5L46 A;  4G7Z A;  3S17 C;  5EGH A;  4KAT A;  4WFB S;  3GTP K;  3TTG A;  1VLO A;  3EQL A;  1G51 A;  4M1X A;  4A3L C;  1AB4 A;  4FM9 A;  1O26 A;  3QX3 A;  3JST A;  1K83 K;  2VUM K;  1TWC C;  4BBR K;  2PPB A;  3HKZ L;  1K83 C;  3CQZ K;  3FKI C;  3AQO A;  3T01 A;  2R7Z K;  4XSZ A;  1XXB A;  2W7V A;  3ADA C;  1YX2 A;  4GT9 A;  3SZY A;  1C0A A;  2Y0S D;  2NVQ C;  2NVY A;  2ZUF A;  3S16 K;  1I6H C;  3GSI A;  2E2H A;  2NVQ K;  4WJ3 M;  2V6T A;  3HOW K;  2NVX K;  1B4B A;  1I6H K;  4Y52 K;  1YNN A;  5IYB C;  2A68 A;  4KAS A;  2R93 A;  4BY7 K;  2E2H C;  3GTQ K;  4AYB D;  1DCO A;  1BJT A;  3LYW A;  3OEP A;  3S15 K;  4A3C K;  2FQT A;  3GTK K;  5IYC K;  3I4M C;  3HOX C;  1USM A;  2BE5 A;  2A69 A;  1O28 A;  1IS1 A;  2V6U A;  3S2D K;  4GZY A;  2NVX C;  1TWC A;  3GTL A;  4Q4Z A;  2PA8 L;  1TWH C;  3GTG A;  4AH6 A;  1ZVU A;  2R7Z A;  3RZD C;  2PA8 D;  4A3E K;  1INN A;  3PIP S;  1Y1V K;  2PMZ L;  1I3Q K;  4XSX A;  4YFK A;  4GTL A;  3TFH A;  3GTJ A;  3AQP A;  1R9T A;  3SZZ A;  4A3E C;  1I50 K;  4WIL A;  2NVY K;  3M3Y K;  1IL2 A;  1DCP A;  4PAB A;  3GDZ A;  1R9T C;  4C3H K;  1WQG A;  2JA7 K;  5HL8 A;  1J6X A;  1TWA C;  3HOU K;  3VA7 A;  4G0U A;  4IOA S;  3M4O C;  1B4A A;  2RGR A;  3S2H K;  4A3B C;  1WQF A;  4MEY A;  3I4N C;  4BY7 C;  3AD7 C;  3DLL S;  4BBS C;  3GEH A;  1F7U A;  3BP3 A;  1WCM K;  5C4J K;  5HL7 S;  4BXX C;  3HOZ K;  1WCM C;  1XPP A;  4ILD A;  3GTP A;  5C44 C;  5JFE A;  1TWF K;  1WOP A;  1O2B A;  2Y0S L;  1TWG A;  4NOI A;  4GTA A;  4YG2 A;  3H0G C;  3GTQ A;  2GSU A;  3S16 C;  2JA5 K;  3S14 K;  3A8J A;  5TMF A;  2JA8 C;  4LK1 A;  5JVO A;  4JK1 A;  2WAQ L;  3NUH A;  2P8T A;  4BLB A;  3GTJ K;  4PAA A;  2CW0 A;  4OIQ A;  3GTJ C;  3HOV K;  2B63 A;  1HI9 A;  1ZXO A;  4C45 A;  2PHC B;  1O2F B;  3G4A A;  3K7A C;  5JVG S;  3HOV C;  3GTK C;  4Q5S A;  4C3I C;  4GTC A;  3PO2 C;  5C4X C;  3S1R C;  4BXX K;  1EFW A;  3H0G A;  3S1R K;  2NVX A;  1TWG C;  4OIR A;  2PMZ D;  3HOW C;  3S2H C;  1EI6 A;  4X6A C;  1YNJ A;  3S1M K;  3GTK A;  1PJ5 A;  3CF5 S;  3RZD K;  1XZQ B;  3H3V D;  4GTB A;  4KB4 A;  2GSN A;  2B63 C;  1F93 A;  2FQO A;  4O2D A;  4YFN A;  1IW7 A;  1Y1W C;  3G4C A;  2GAG C;  4C3J K;  3DXJ A;  3FOF A;  4U67 S;  1SFO C;  2XCQ A;  5IYC C;  2ZJP S;  4WF9 S;  3A8K A;  4RMF A;  3T00 A;  2KQ1 A;  1WOR A;  3OPF A;  5M3M K;  2R92 K;  2NVT K;  1V5V A;  5IYD C;  3I4M K;  2NVT C;  1DCH A;  3PIO S;  2JA6 A;  4A3L K;  3HOY C;  4A3G C;  5M5Y K;  2ZUE A;  3HOU C;  2L3U A;  4AYB L;  4GFQ A;  4BKW A;  1XZQ A;  5CHP A;  3I4N K;  4P9S A;  5EGE A;  3FKI A;  4BY1 K;  3LPX A;  4YFX A;  4WFN S;  3GTM A;  4A3F C;  3GEI A;  1J98 A;  4ZH4 A;  3CAG A;  1I3Q C;  4WCE S;  5FJ8 K;  2EBB A;  4C2M K;  2E2I C;  1GE9 A;  2E2I A;  3HOX K;  2ZFZ A;  1I3Q A;  1EQR A;  1Y1V A;  2R92 A;  4C3H C;  1EH1 A;  4OIN A;  3BP8 C;  5CJ9 A;  4KN7 A;  1TWA K;  3H0G K;  4LLG A;  5IP7 K;  5IOQ A;  3RZO C;  1IQ0 A;  3HXA A;  5HQH A;  1TWH K;  1PJ6 A;  5IYB K;  4QJV B;  3TFJ A;  3AH5 A;  4G0V A;  1SMY A;  4KN4 A;  4G7O A;  4GTF A;  4WJ4 A;  4C2M C;  1O24 A;  5C4J C;  4G7H A;  5IP9 C;  4KMH A;  3HOZ C;  3N0C A;  2YU9 A;  3GTL C;  2GSO A;  2XCR B;  4IO9 S;  3TFI A;  2KPU A;  5IP9 K;  3Q3Q A;  5C44 K;  5D4D A;  2JA5 A;  3N3Y A;  2V6S A;  3GTL K;  1J6W A;  4A93 K;  4LOW A;  1Y1W A;  3S1N K;  2A6H A;  5M5W K;  4GTD A;  3GTO K;  4A3I C;  4C3J C;  2E2H K;  4A3I K;  5E68 A;  5IP7 C;  1ISE A;  4QJV A;  3S15 C;  1SFO K;  1VGX A;  1K83 A;  1YCL A; 
#chains in the Genus database with same CATH homology
 4GZY A;  3RZD K;  2E2J K;  2E2I K;  2NVX C;  3H3V D;  4BY1 C;  2O5I A;  5C4X K;  1Y1W K;  3PO2 K;  5C3E K;  4Y7N C;  5IYD K;  2B63 C;  1TWG K;  3PO3 C;  4YFN A;  4C3I K;  1IW7 A;  1Y1W C;  4Q4Z A;  2YU9 C;  4C3J K;  3DXJ A;  3PO3 K;  2PA8 L;  1TWH C;  2JA5 C;  1SFO C;  3S14 C;  2R93 C;  4KMU A;  5IYC C;  3S1Q C;  3RZD C;  2PA8 D;  2E2J C;  3S1M K;  4A3E K;  4A3K C;  3GTM C;  5M3M K;  2R92 K;  2NVT K;  1Y1V K;  2PMZ L;  1I3Q K;  4XSX A;  4YFK A;  5IYD C;  3S17 K;  3I4M K;  4A3B K;  2NVT C;  5M5X K;  4A3E C;  4LK0 A;  1I50 K;  2A6E A;  4A3L K;  2NVY K;  3S2D C;  3H3V L;  1BDF A;  3HKZ D;  4A3C C;  3HOY K;  3M3Y K;  1R9T C;  4A3J K;  1I6V A;  2NVY C;  3HOY C;  3M3Y C;  4A3G C;  4C3H K;  5M5Y K;  3HOU C;  2JA6 K;  2VUM C;  4A3J C;  1R9T K;  2JA7 K;  2WB1 D;  4AYB L;  4XLN A;  4Y7N K;  2O5J A;  1TWA C;  2R7Z C;  2R92 C;  3I4N K;  2JA6 C;  3HOU K;  4G7Z A;  3FKI K;  3S17 C;  3GTP K;  4OIP A;  4A3F K;  3EQL A;  4BY1 K;  4YFX A;  3M4O C;  4A3F C;  4QIW D;  4A93 C;  3S15 C;  4OIO A;  4ZH4 A;  3S2H K;  1I3Q C;  4A3B C;  1I50 C;  4A3L C;  5FJ8 K;  4C2M K;  1TWF C;  4MEY A;  3I4N C;  4MEX A;  4BY7 C;  2E2I C;  4BBS C;  3HOX K;  3S1Q K;  1K83 K;  4A3M K;  5C3E C;  1WCM K;  2VUM K;  1TWC C;  4BBR K;  4MQ9 A;  5C4J K;  4A3K K;  3GTM K;  2PPB A;  3HKZ L;  4C3H C;  4A3G K;  4OIN A;  4BXX C;  3HOZ K;  1WCM C;  1XPP A;  4X6A K;  1K83 C;  4A3M C;  5C44 C;  3WOD A;  3CQZ K;  3FKI C;  4Y52 C;  4KN7 A;  1TWF K;  1TWA K;  2R7Z K;  4XSZ A;  2Y0S L;  3H0G K;  4LLG A;  3RZO K;  3M4O K;  5IP7 K;  4A3D K;  4NOI A;  3RZO C;  4BBS K;  4YG2 A;  3H0G C;  5M3F K;  3K7A K;  2Y0S D;  3S16 C;  1TWH K;  2JA5 K;  3S14 K;  2NVQ C;  5IYB K;  3CQZ C;  4QJV B;  5TMF A;  1SMY A;  2JA8 C;  4LK1 A;  3S16 K;  4KN4 A;  4G7O A;  4C2M C;  4JK1 A;  5FLM C;  1I6H C;  2WAQ L;  3GTJ K;  5C4J C;  4QIW L;  4G7H A;  2CW0 A;  5IP9 C;  2JA7 C;  1HQM A;  2NVQ K;  4OIQ A;  3HOZ C;  3HOW K;  3GTJ C;  5TMC A;  2NVX K;  5FLM K;  3GTL C;  3HOV K;  1I6H K;  3GTG K;  4Y52 K;  1YNN A;  5IP9 K;  4XLP A;  3GTO C;  5IYB C;  2A68 A;  5C44 K;  5D4D A;  4BY7 K;  3GTG C;  3K7A C;  2E2H C;  3HOV C;  3GTK C;  4Q5S A;  4AYB D;  4C3I C;  2WB1 L;  3GTL K;  3GTQ K;  3S1N C;  4BBR C;  1TWC K;  2R93 K;  4A93 K;  3S1M C;  3S15 K;  3PO2 C;  5C4X C;  3S1R C;  4A3C K;  4BXX K;  3S1N K;  1ZYR A;  2A6H A;  3GTQ C;  3GTK K;  5M5W K;  5IYC K;  3S1R K;  2JA8 K;  2WAQ D;  3I4M C;  3HOX C;  1TWG C;  2B63 K;  3GTO K;  2BE5 A;  4A3I C;  4OIR A;  1Y1V C;  4LJZ A;  2A69 A;  4C3J C;  2E2H K;  2YU9 K;  2PMZ D;  4A3I K;  3HOW C;  3S2H C;  5IP7 C;  4A3D C;  4X6A C;  4QJV A;  1YNJ A;  1SFO K;  3GTP C;  3S2D K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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