3HOUC

Complete rna polymerase ii elongation complex i with a t-u mismatch
Total Genus 50
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
50
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA.
pubmed doi rcsb
molecule tags Transcription,transferase/dna/rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 50
structure length 266
sequence length 266
chains with identical sequence O
ec nomenclature
pdb deposition date 2009-06-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3houC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3houC01
4G7OA 1IW7A 4A3CK 4QJVA 1SFOC 3GTQC 1Y1VC 4G7ZA 4AYBL 4BY1K 3GTLC 4A3EK 4LLGA 2JA5C 3PO2C 1I6HK 2R7ZC 4A3CC 1I50K 1SMYA 4A3KK 1R9TK 2NVYK 4A3LC 2WAQL 3CQZK 2NVTK 4X6AC 3H0GK 5C4XK 2PA8L 4KMUA 3GTLK 3H3VL 1TWAC 2R92K 3M3YC 3GTKK 3HKZD 2A6EA 4JK1A 2VUMK 2B63C 1TWGK 4C3IC 3FKIK 2NVXK 4A3IK 3S17C 3HOUC 4A3FC 4C3JK 3GTPK 3I4MK 4C2MK 4AYBD 4A3EC 4OIPA 2E2HC 4Y52C 2NVQC 1TWCC 4OIOA 2R92C 3S1QK 3I4MC 3HOVC 3S1RK 1R9TC 4G7HA 4BBRC 4Y52K 4A3IC 2WAQD 4C3JC 1TWFK 1I6HC 2A6HA 3M3YK 2JA5K 1Y1VK 3DXJA 1BDFA 5FLMK 5C4JC 3RZOC 3HOXC 3S16C 2WB1L 5M5WK 2YU9K 2NVYC 2R93C 5IP9C 3EQLA 3S2DK 5IYDK 2NVTC 4KN4A 2O5IA 1XPPA 2JA7C 4GZYA 4A3LK 1I3QC 3RZDK 3PO3C 5IP7K 2R93K 5IYDC 4BY1C 5M3FK 5C4JK 2VUMC 1SFOK 2YU9C 4A3MK 3M4OC 4A93K 1TWHC 4ZH4A 4A3BK 4XSZA 4C2MC 1YNJA 2PMZD 3S14K 3HOUK 4BBSC 1TWHK 4OINA 2JA6K 2E2IK 2WB1D 3S1QC 2PMZL 1K83K 3HOZC 5C44K 3RZDC 4MEXA 1TWFC 1I3QK 4BBSK 3CQZC 3S17K 3HKZL 1YNNA 4QIWL 3GTOC 3K7AC 4C3HK 3HOXK 4A3MC 3S16K 5FLMC 2O5JA 3S15K 3H0GC 5C4XC 3HOZK 4YG2A 4A3DC 3GTMC 3HOYC 3PO3K 3S1MC 3GTPC 4A3FK 2JA6C 4LJZA 2JA8C 3FKIC 5IP7C 4Y7NC 3S1NK 3S2HK 2R7ZK 3S1MK 5TMFA 2E2JC 3HOWC 4MEYA 5C44C 4Q5SA 4A3BC 2CW0A 2E2HK 4A3JC 2NVQK 4XLPA 2A69A 4X6AK 3WODA 1WCMK 5C3EK 2JA8K 4NOIA 4QIWD 2E2IC 2NVXC 3S1NC 4Y7NK 3GTGC 4A3GK 2PA8D 1K83C 3H3VD 2Y0SL 4A3JK 4A3DK 5IP9K 3S1RC 2A68A 3HOVK 4LK1A 4BXXK 4Q4ZA 4LK0A 1I6VA 3S2HC 3I4NC 4C3HC 1ZYRA 1TWCK 3K7AK 4OIQA 5FJ8K 2E2JK 1TWGC 2B63K 2Y0SD 3PO2K 4BY7C 5IYBK 3GTJK 1Y1WK 4A93C 3M4OK 3S15C 5C3EC 3RZOK 5M5YK 5IYCC 4MQ9A 3GTKC 1TWAK 4KN7A 3HOWK 2JA7K 3S14C 5IYBC 4BY7K 3GTOK 4XLNA 4YFKA 5M5XK 1I50C 4BXXC 4QJVB 1WCMC 4YFNA 1HQMA 4YFXA 4C3IK 3I4NK 3GTMK 3HOYK 2BE5A 4OIRA 5D4DA 5M3MK 3GTQK 3GTGK 4A3GC 3GTJC 1Y1WC 3S2DC 4XSXA 2PPBA 4BBRK 4A3KC 5IYCK 5TMCA
chains in the Genus database with same CATH superfamily
1FEUA 1IW7A 5L46A 3GTQC 3ADAC 3OEPA 2JA5A 4LLGA 2JA5C 3PO2C 3GTQA 4A3CC 4U67S 4KATA 4GFQA 2V6SA 2NVYK 1C0AA 3CQZK 4WJ4A 1VRQC 2R92K 5HL7S 3HKZD 3TFJA 1TWGK 2NVXA 3FKIK 4A3FC 1AB4A 3GTPK 3I4MK 3PIOS 3TFIA 1TWCC 4OIOA 4KM8A 4A3IC 4PAAA 4AH6A 2WAQD 3DLLS 1F7UA 3GTLA 1TWFK 1I6HC 1WOOA 3L4KA 1R9TA 4BLBA 1ZVUA 1KQ4A 3T01A 1XPPA 4GZYA 4KARA 3PO3C 3GDZA 5IP7K 4BY1C 1SFOK 2YU9C 3HXAA 3M4OC 4ZH4A 4P9SA 4A3BK 4C2MC 3S14K 1J6VA 1VGXA 1USMA 1DCHA 2GSUA 3HOZC 1O26A 2KPUA 1USOA 4KMAA 3SZYA 4C3HK 2O5JA 3S15K 4KASA 4WJ3M 1WQFA 3TFHA 2E2IA 4FZBA 2JA8C 3FKIC 4Y7NC 3GIRA 2E2JC 4MEYA 1VLOA 3GEIA 3CF5S 1TWHA 4X6AK 4LR2A 2E2IC 3S1NC 5CHPA 2JA7A 4GT9A 2P8TA 3GEHA 4LK1A 2GAHC 4LK0A 1I6VA 3IPJA 2ZJPS 2E2JK 4G0UA 3PO2K 1XZPB 1Y1VA 4KM9A 3MMLB 3PIPS 4MQ9A 4C45A 3S14C 5IYBC 4BY7K 4J3NA 2ZUFA 1ISEA 1I50C 4QJVB 2FQOA 2Y3PA 3GTMA 3Q3QA 5M3MK 1TWAA 5CJ9A 4A3GC 2KQ1A 1EQRA 3LPXA 3GTGC 2PPBA 3NUHA 4A3KC 5TMCA 4GTCA 1I6HK 3GTLC 3SZZA 1I50K 1JQWA 2ZUEA 1DCPA 1K83A 3H3VL 4JK1A 2B63C 1JOEA 4C3IC 4C2MK 2E2HC 2NVQC 2R92C 3AD7C 1O25A 2R93A 4IO9S 4G7HA 4WF9S 4PABA 4Y52K 2W7VA 2A6HA 1TWGA 3AQPA 3BUEA 3JSTA 2D6FC 1GE9A 1Y1VK 1BDFA 5C4JC 5M5WK 2R93C 3EQLA 3S2DK 5IYDK 2NVTC 3CQZA 5EGEA 3V4GA 1O2BA 4GTDA 1YNJA 4BBSC 1HI9A 1TWHK 3G4AA 4OINA 2KWAA 4GTEA 2E2IK 2WB1D 2GAGC 1F93A 1XXBA 2RGRA 2PMZL 4LQYA 5C44K 1BS2A 5JVGS 3CQZC 3T00A 4G0WA 4QIWL 3CAGA 3HOXK 3S16K 1UV7A 4GTBA 3HOZK 4YG2A 3GTMC 3HOYC 4BKWA 4G0VA 3GTPC 3FHZA 4A3FK 3ERED 2R7ZK 3S1MK 5TMFA 3AD9C 5C44C 2E2HA 2CW0A 4P5AA 2E2HK 1O2FB 2NVQK 3WODA 1IQ0A 3QX3A 2JA8K 1J98A 4Y7NK 2B63A 5IOQA 5E68A 4A3GK 1K83C 1XXCA 1B4AA 3S1RC 4Q4ZA 5IORA 3K7AK 1ZYRA 1YX2A 4OIQA 5FJ8K 1TWFA 1PJ5A 1ZXOA 3M4OK 3GTGA 4KAWX 3HOWK 4XLNA 3LAJA 3A8JA 4IOCS 3FKIA 4C3IK 1HQMA 4DDQA 1I50A 4WFBS 3BP3A 2NVYA 1G51A 2KXYA 3N0CA 4A3CK 4WFAS 1DD5A 3A8IA 4AYBL 1Y1VC 2V6UA 3TTGA 1BGWA 2GSNA 4KDDA 1DCOA 3T02A 1F7VA 1SMYA 3OREA 4A3KK 1R9TK 2RH6A 2NVTK 4X6AC 5C4XK 2PA8L 4KMUA 4O2DA 3GTLK 1XZPA 3GTKK 2A6EA 1PJ6A 3S17C 4KMDA 4C3JK 3OPFA 3I4MC 3S1RK 2ZFZA 1R9TC 5IOTA 3LAPA 1EFWA 2R7ZA 1IS1A 2L3UA 1XXAA 3HOXC 3S16C 2WB1L 1IL2A 5IP9C 2XCRB 4KN4A 4KMHA 4A3LK 3RZDK 1INNA 5HL8A 4WILA 5C4JK 2VUMC 4A3MK 4A93K 1EI6A 4XSZA 1IE0A 3HOUK 2JH3A 2EBBA 3S1QC 1K83K 3RZDC 4MEXA 5JFEA 4BBSK 3HKZL 1YNNA 2XCOA 3GTOC 3K7AC 4WCES 4A3MC 5FLMC 1WSVA 1Y1WA 5C4XC 4A3DC 2ZJRS 4LJZA 3S2HK 5IOSA 2CFAA 3HOWC 1TWCA 1L0WA 4Q5SA 4A3JC 2A69A 5C3EK 4NOIA 4QIWD 2NVXC 1YCLA 3N3YA 1PJ7A 3H3VD 4A3DK 4WFNS 1EK8A 1JVIA 3HOVK 4BXXK 3I4NC 3S2HC 1TWCK 5JVOA 3VA7A 1ZQ1C 1TWGC 3GTJK 4FM9A 5C3EC 3RZOK 5M5YK 3GTKC 5EGHA 1X31C 2R92A 2JA7K 3AQOA 1BJTA 4BXXC 1WCMC 4YFNA 3I4NK 4YFXA 2VUMA 2JA6A 3GTMK 3HOYK 2BE5A 4OIRA 1XZQA 4LOWA 3S0XA 3GTQK 3GTGK 3H0GA 3GTJC 3GEEA 5TJ3A 1B4BA 4G7OA 4QJVA 1SFOC 4BY1K 4G7ZA 4A3EK 2R7ZC 2XCQA 1O29A 4A3LC 4KC6A 2WAQL 5JVHS 2FQTA 3H0GK 1TWAC 1VH2A 3M3YC 2VUMK 1O27A 2NVXK 4A3IK 3HOUC 3AH5A 1J6XA 3A8KA 4AYBD 4A3EC 4OIPA 1WIHA 4Y52C 3S1QK 3HOVC 4BBRC 1RU0A 4C3JC 1WQHA 1O24A 3M3YK 2JA5K 3DXJA 5FLMK 3RZOC 2YU9K 2NVYC 4GTFA 2O5IA 2JA7C 1WOPA 1I3QC 2V6TA 1EH1A 1O2AA 2R93K 5IYDC 2PHCB 5HQHA 5M3FK 3AD8C 3L4JA 1TWHC 2PMZD 1ZBSA 2P5MA 3GSIA 2JA6K 4IOAS 1I3QA 1IBAA 1I3QK 1XZQB 1TWFC 1SFOA 3FOFA 3S17K 4KB4A 3G4CA 3GTJA 5DM6S 4ILDA 3H0GC 3PO3K 3S1MC 2JA6C 5IP7C 3S1NK 4A3BC 1VJEA 4XLPA 3GTKA 1WCMK 2YU9A 4KB2A 2L5NA 3GTPA 2PA8D 4BLAA 2Y0SL 4M1XA 4A3JK 5IP9K 1WQGA 3FOEA 4P5BA 2A68A 1WORA 4GTLA 4C3HC 2CFAB 4XCHA 2B63K 2Y0SD 4BY7C 5IYBK 1Y1WK 1WOSA 4A93C 3BP8C 3S15C 1J6WA 5IYCC 1TWAK 3LYWA 1O28A 4KN7A 1V5VA 3GTOK 4YFKA 4RMFA 5M5XK 1F9NA 3N0BA 1WCMA 5DM7S 5D4DA 1Y1WC 2GSOA 1WSRA 3S2DC 4GTAA 3GTOA 4XSXA 4BBRK 5IYCK 2ZJQS
chains in the Genus database with same CATH topology
4G7OA 1IW7A 4A3CK 4QJVA 1SFOC 3GTQC 1Y1VC 4G7ZA 4AYBL 4BY1K 3GTLC 4A3EK 4LLGA 2JA5C 3PO2C 1I6HK 2R7ZC 4A3CC 1I50K 1SMYA 4A3KK 1R9TK 2NVYK 4A3LC 2WAQL 3CQZK 2NVTK 4X6AC 3H0GK 5C4XK 2PA8L 4KMUA 3GTLK 3H3VL 1TWAC 2R92K 3M3YC 3GTKK 3HKZD 2A6EA 4JK1A 2VUMK 2B63C 1TWGK 4C3IC 3FKIK 2NVXK 4A3IK 3S17C 3HOUC 4A3FC 4C3JK 3GTPK 3I4MK 4C2MK 4AYBD 4A3EC 4OIPA 2E2HC 4Y52C 2NVQC 1TWCC 4OIOA 2R92C 3S1QK 3I4MC 3HOVC 3S1RK 1R9TC 4G7HA 4BBRC 4Y52K 4A3IC 2WAQD 4C3JC 1TWFK 1I6HC 2A6HA 3M3YK 2JA5K 1Y1VK 3DXJA 1BDFA 5FLMK 5C4JC 3RZOC 3HOXC 3S16C 2WB1L 5M5WK 2YU9K 2NVYC 2R93C 5IP9C 3EQLA 3S2DK 5IYDK 2NVTC 4KN4A 2O5IA 1XPPA 2JA7C 4GZYA 4A3LK 1I3QC 3RZDK 3PO3C 5IP7K 2R93K 5IYDC 4BY1C 5M3FK 5C4JK 2VUMC 1SFOK 2YU9C 4A3MK 3M4OC 4A93K 1TWHC 4ZH4A 4A3BK 4XSZA 4C2MC 1YNJA 2PMZD 3S14K 3HOUK 4BBSC 1TWHK 4OINA 2JA6K 2E2IK 2WB1D 3S1QC 2PMZL 1K83K 3HOZC 5C44K 3RZDC 4MEXA 1TWFC 1I3QK 4BBSK 3CQZC 3S17K 3HKZL 1YNNA 4QIWL 3GTOC 3K7AC 4C3HK 3HOXK 4A3MC 3S16K 5FLMC 2O5JA 3S15K 3H0GC 5C4XC 3HOZK 4YG2A 4A3DC 3GTMC 3HOYC 3PO3K 3S1MC 3GTPC 4A3FK 2JA6C 4LJZA 2JA8C 3FKIC 5IP7C 4Y7NC 3S1NK 3S2HK 2R7ZK 3S1MK 5TMFA 2E2JC 3HOWC 4MEYA 5C44C 4Q5SA 4A3BC 2CW0A 2E2HK 4A3JC 2NVQK 4XLPA 2A69A 4X6AK 3WODA 1WCMK 5C3EK 2JA8K 4NOIA 4QIWD 2E2IC 2NVXC 3S1NC 4Y7NK 3GTGC 4A3GK 2PA8D 1K83C 3H3VD 2Y0SL 4A3JK 4A3DK 5IP9K 3S1RC 2A68A 3HOVK 4LK1A 4BXXK 4Q4ZA 4LK0A 1I6VA 3S2HC 3I4NC 4C3HC 1ZYRA 1TWCK 3K7AK 4OIQA 5FJ8K 2E2JK 1TWGC 2B63K 2Y0SD 3PO2K 4BY7C 5IYBK 3GTJK 1Y1WK 4A93C 3M4OK 3S15C 5C3EC 3RZOK 5M5YK 5IYCC 4MQ9A 3GTKC 1TWAK 4KN7A 3HOWK 2JA7K 3S14C 5IYBC 4BY7K 3GTOK 4XLNA 4YFKA 5M5XK 1I50C 4BXXC 4QJVB 1WCMC 4YFNA 1HQMA 4YFXA 4C3IK 3I4NK 3GTMK 3HOYK 2BE5A 4OIRA 5D4DA 5M3MK 3GTQK 3GTGK 4A3GC 3GTJC 1Y1WC 3S2DC 4XSXA 2PPBA 4BBRK 4A3KC 5IYCK 5TMCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4G7O A;  1IW7 A;  4A3C K;  4QJV A;  1SFO C;  3GTQ C;  1Y1V C;  4G7Z A;  4AYB L;  4BY1 K;  3GTL C;  4A3E K;  4LLG A;  2JA5 C;  3PO2 C;  1I6H K;  2R7Z C;  4A3C C;  1I50 K;  1SMY A;  4A3K K;  1R9T K;  2NVY K;  4A3L C;  2WAQ L;  3CQZ K;  2NVT K;  4X6A C;  3H0G K;  5C4X K;  2PA8 L;  4KMU A;  3GTL K;  3H3V L;  1TWA C;  2R92 K;  3M3Y C;  3GTK K;  3HKZ D;  2A6E A;  4JK1 A;  2VUM K;  2B63 C;  1TWG K;  4C3I C;  3FKI K;  2NVX K;  4A3I K;  3S17 C;  3HOU C;  4A3F C;  4C3J K;  3GTP K;  3I4M K;  4C2M K;  4AYB D;  4A3E C;  4OIP A;  2E2H C;  4Y52 C;  2NVQ C;  1TWC C;  4OIO A;  2R92 C;  3S1Q K;  3I4M C;  3HOV C;  3S1R K;  1R9T C;  4G7H A;  4BBR C;  4Y52 K;  4A3I C;  2WAQ D;  4C3J C;  1TWF K;  1I6H C;  2A6H A;  3M3Y K;  2JA5 K;  1Y1V K;  3DXJ A;  1BDF A;  5FLM K;  5C4J C;  3RZO C;  3HOX C;  3S16 C;  2WB1 L;  5M5W K;  2YU9 K;  2NVY C;  2R93 C;  5IP9 C;  3EQL A;  3S2D K;  5IYD K;  2NVT C;  4KN4 A;  2O5I A;  1XPP A;  2JA7 C;  4GZY A;  4A3L K;  1I3Q C;  3RZD K;  3PO3 C;  5IP7 K;  2R93 K;  5IYD C;  4BY1 C;  5M3F K;  5C4J K;  2VUM C;  1SFO K;  2YU9 C;  4A3M K;  3M4O C;  4A93 K;  1TWH C;  4ZH4 A;  4A3B K;  4XSZ A;  4C2M C;  1YNJ A;  2PMZ D;  3S14 K;  3HOU K;  4BBS C;  1TWH K;  4OIN A;  2JA6 K;  2E2I K;  2WB1 D;  3S1Q C;  2PMZ L;  1K83 K;  3HOZ C;  5C44 K;  3RZD C;  4MEX A;  1TWF C;  1I3Q K;  4BBS K;  3CQZ C;  3S17 K;  3HKZ L;  1YNN A;  4QIW L;  3GTO C;  3K7A C;  4C3H K;  3HOX K;  4A3M C;  3S16 K;  5FLM C;  2O5J A;  3S15 K;  3H0G C;  5C4X C;  3HOZ K;  4YG2 A;  4A3D C;  3GTM C;  3HOY C;  3PO3 K;  3S1M C;  3GTP C;  4A3F K;  2JA6 C;  4LJZ A;  2JA8 C;  3FKI C;  5IP7 C;  4Y7N C;  3S1N K;  3S2H K;  2R7Z K;  3S1M K;  5TMF A;  2E2J C;  3HOW C;  4MEY A;  5C44 C;  4Q5S A;  4A3B C;  2CW0 A;  2E2H K;  4A3J C;  2NVQ K;  4XLP A;  2A69 A;  4X6A K;  3WOD A;  1WCM K;  5C3E K;  2JA8 K;  4NOI A;  4QIW D;  2E2I C;  2NVX C;  3S1N C;  4Y7N K;  3GTG C;  4A3G K;  2PA8 D;  1K83 C;  3H3V D;  2Y0S L;  4A3J K;  4A3D K;  5IP9 K;  3S1R C;  2A68 A;  3HOV K;  4LK1 A;  4BXX K;  4Q4Z A;  4LK0 A;  1I6V A;  3S2H C;  3I4N C;  4C3H C;  1ZYR A;  1TWC K;  3K7A K;  4OIQ A;  5FJ8 K;  2E2J K;  1TWG C;  2B63 K;  2Y0S D;  3PO2 K;  4BY7 C;  5IYB K;  3GTJ K;  1Y1W K;  4A93 C;  3M4O K;  3S15 C;  5C3E C;  3RZO K;  5M5Y K;  5IYC C;  4MQ9 A;  3GTK C;  1TWA K;  4KN7 A;  3HOW K;  2JA7 K;  3S14 C;  5IYB C;  4BY7 K;  3GTO K;  4XLN A;  4YFK A;  5M5X K;  1I50 C;  4BXX C;  4QJV B;  1WCM C;  4YFN A;  1HQM A;  4YFX A;  4C3I K;  3I4N K;  3GTM K;  3HOY K;  2BE5 A;  4OIR A;  5D4D A;  5M3M K;  3GTQ K;  3GTG K;  4A3G C;  3GTJ C;  1Y1W C;  3S2D C;  4XSX A;  2PPB A;  4BBR K;  4A3K C;  5IYC K;  5TMC A; 
#chains in the Genus database with same CATH topology
 1FEU A;  1IW7 A;  5L46 A;  3GTQ C;  3ADA C;  3OEP A;  2JA5 A;  4LLG A;  2JA5 C;  3PO2 C;  3GTQ A;  4A3C C;  4U67 S;  4KAT A;  4GFQ A;  2V6S A;  2NVY K;  1C0A A;  3CQZ K;  4WJ4 A;  1VRQ C;  2R92 K;  5HL7 S;  3HKZ D;  3TFJ A;  1TWG K;  2NVX A;  3FKI K;  4A3F C;  1AB4 A;  3GTP K;  3I4M K;  3PIO S;  3TFI A;  1TWC C;  4OIO A;  4KM8 A;  4A3I C;  4PAA A;  4AH6 A;  2WAQ D;  3DLL S;  1F7U A;  3GTL A;  1TWF K;  1I6H C;  1WOO A;  3L4K A;  1R9T A;  4BLB A;  1ZVU A;  1KQ4 A;  3T01 A;  1XPP A;  4GZY A;  4KAR A;  3PO3 C;  3GDZ A;  5IP7 K;  4BY1 C;  1SFO K;  2YU9 C;  3HXA A;  3M4O C;  4ZH4 A;  4P9S A;  4A3B K;  4C2M C;  3S14 K;  1J6V A;  1VGX A;  1USM A;  1DCH A;  2GSU A;  3HOZ C;  1O26 A;  2KPU A;  1USO A;  4KMA A;  3SZY A;  4C3H K;  2O5J A;  3S15 K;  4KAS A;  4WJ3 M;  1WQF A;  3TFH A;  2E2I A;  4FZB A;  2JA8 C;  3FKI C;  4Y7N C;  3GIR A;  2E2J C;  4MEY A;  1VLO A;  3GEI A;  3CF5 S;  1TWH A;  4X6A K;  4LR2 A;  2E2I C;  3S1N C;  5CHP A;  2JA7 A;  4GT9 A;  2P8T A;  3GEH A;  4LK1 A;  2GAH C;  4LK0 A;  1I6V A;  3IPJ A;  2ZJP S;  2E2J K;  4G0U A;  3PO2 K;  1XZP B;  1Y1V A;  4KM9 A;  3MML B;  3PIP S;  4MQ9 A;  4C45 A;  3S14 C;  5IYB C;  4BY7 K;  4J3N A;  2ZUF A;  1ISE A;  1I50 C;  4QJV B;  2FQO A;  2Y3P A;  3GTM A;  3Q3Q A;  5M3M K;  1TWA A;  5CJ9 A;  4A3G C;  2KQ1 A;  1EQR A;  3LPX A;  3GTG C;  2PPB A;  3NUH A;  4A3K C;  5TMC A;  4GTC A;  1I6H K;  3GTL C;  3SZZ A;  1I50 K;  1JQW A;  2ZUE A;  1DCP A;  1K83 A;  3H3V L;  4JK1 A;  2B63 C;  1JOE A;  4C3I C;  4C2M K;  2E2H C;  2NVQ C;  2R92 C;  3AD7 C;  1O25 A;  2R93 A;  4IO9 S;  4G7H A;  4WF9 S;  4PAB A;  4Y52 K;  2W7V A;  2A6H A;  1TWG A;  3AQP A;  3BUE A;  3JST A;  2D6F C;  1GE9 A;  1Y1V K;  1BDF A;  5C4J C;  5M5W K;  2R93 C;  3EQL A;  3S2D K;  5IYD K;  2NVT C;  3CQZ A;  5EGE A;  3V4G A;  1O2B A;  4GTD A;  1YNJ A;  4BBS C;  1HI9 A;  1TWH K;  3G4A A;  4OIN A;  2KWA A;  4GTE A;  2E2I K;  2WB1 D;  2GAG C;  1F93 A;  1XXB A;  2RGR A;  2PMZ L;  4LQY A;  5C44 K;  1BS2 A;  5JVG S;  3CQZ C;  3T00 A;  4G0W A;  4QIW L;  3CAG A;  3HOX K;  3S16 K;  1UV7 A;  4GTB A;  3HOZ K;  4YG2 A;  3GTM C;  3HOY C;  4BKW A;  4G0V A;  3GTP C;  3FHZ A;  4A3F K;  3ERE D;  2R7Z K;  3S1M K;  5TMF A;  3AD9 C;  5C44 C;  2E2H A;  2CW0 A;  4P5A A;  2E2H K;  1O2F B;  2NVQ K;  3WOD A;  1IQ0 A;  3QX3 A;  2JA8 K;  1J98 A;  4Y7N K;  2B63 A;  5IOQ A;  5E68 A;  4A3G K;  1K83 C;  1XXC A;  1B4A A;  3S1R C;  4Q4Z A;  5IOR A;  3K7A K;  1ZYR A;  1YX2 A;  4OIQ A;  5FJ8 K;  1TWF A;  1PJ5 A;  1ZXO A;  3M4O K;  3GTG A;  4KAW X;  3HOW K;  4XLN A;  3LAJ A;  3A8J A;  4IOC S;  3FKI A;  4C3I K;  1HQM A;  4DDQ A;  1I50 A;  4WFB S;  3BP3 A;  2NVY A;  1G51 A;  2KXY A;  3N0C A;  4A3C K;  4WFA S;  1DD5 A;  3A8I A;  4AYB L;  1Y1V C;  2V6U A;  3TTG A;  1BGW A;  2GSN A;  4KDD A;  1DCO A;  3T02 A;  1F7V A;  1SMY A;  3ORE A;  4A3K K;  1R9T K;  2RH6 A;  2NVT K;  4X6A C;  5C4X K;  2PA8 L;  4KMU A;  4O2D A;  3GTL K;  1XZP A;  3GTK K;  2A6E A;  1PJ6 A;  3S17 C;  4KMD A;  4C3J K;  3OPF A;  3I4M C;  3S1R K;  2ZFZ A;  1R9T C;  5IOT A;  3LAP A;  1EFW A;  2R7Z A;  1IS1 A;  2L3U A;  1XXA A;  3HOX C;  3S16 C;  2WB1 L;  1IL2 A;  5IP9 C;  2XCR B;  4KN4 A;  4KMH A;  4A3L K;  3RZD K;  1INN A;  5HL8 A;  4WIL A;  5C4J K;  2VUM C;  4A3M K;  4A93 K;  1EI6 A;  4XSZ A;  1IE0 A;  3HOU K;  2JH3 A;  2EBB A;  3S1Q C;  1K83 K;  3RZD C;  4MEX A;  5JFE A;  4BBS K;  3HKZ L;  1YNN A;  2XCO A;  3GTO C;  3K7A C;  4WCE S;  4A3M C;  5FLM C;  1WSV A;  1Y1W A;  5C4X C;  4A3D C;  2ZJR S;  4LJZ A;  3S2H K;  5IOS A;  2CFA A;  3HOW C;  1TWC A;  1L0W A;  4Q5S A;  4A3J C;  2A69 A;  5C3E K;  4NOI A;  4QIW D;  2NVX C;  1YCL A;  3N3Y A;  1PJ7 A;  3H3V D;  4A3D K;  4WFN S;  1EK8 A;  1JVI A;  3HOV K;  4BXX K;  3I4N C;  3S2H C;  1TWC K;  5JVO A;  3VA7 A;  1ZQ1 C;  1TWG C;  3GTJ K;  4FM9 A;  5C3E C;  3RZO K;  5M5Y K;  3GTK C;  5EGH A;  1X31 C;  2R92 A;  2JA7 K;  3AQO A;  1BJT A;  4BXX C;  1WCM C;  4YFN A;  3I4N K;  4YFX A;  2VUM A;  2JA6 A;  3GTM K;  3HOY K;  2BE5 A;  4OIR A;  1XZQ A;  4LOW A;  3S0X A;  3GTQ K;  3GTG K;  3H0G A;  3GTJ C;  3GEE A;  5TJ3 A;  1B4B A;  4G7O A;  4QJV A;  1SFO C;  4BY1 K;  4G7Z A;  4A3E K;  2R7Z C;  2XCQ A;  1O29 A;  4A3L C;  4KC6 A;  2WAQ L;  5JVH S;  2FQT A;  3H0G K;  1TWA C;  1VH2 A;  3M3Y C;  2VUM K;  1O27 A;  2NVX K;  4A3I K;  3HOU C;  3AH5 A;  1J6X A;  3A8K A;  4AYB D;  4A3E C;  4OIP A;  1WIH A;  4Y52 C;  3S1Q K;  3HOV C;  4BBR C;  1RU0 A;  4C3J C;  1WQH A;  1O24 A;  3M3Y K;  2JA5 K;  3DXJ A;  5FLM K;  3RZO C;  2YU9 K;  2NVY C;  4GTF A;  2O5I A;  2JA7 C;  1WOP A;  1I3Q C;  2V6T A;  1EH1 A;  1O2A A;  2R93 K;  5IYD C;  2PHC B;  5HQH A;  5M3F K;  3AD8 C;  3L4J A;  1TWH C;  2PMZ D;  1ZBS A;  2P5M A;  3GSI A;  2JA6 K;  4IOA S;  1I3Q A;  1IBA A;  1I3Q K;  1XZQ B;  1TWF C;  1SFO A;  3FOF A;  3S17 K;  4KB4 A;  3G4C A;  3GTJ A;  5DM6 S;  4ILD A;  3H0G C;  3PO3 K;  3S1M C;  2JA6 C;  5IP7 C;  3S1N K;  4A3B C;  1VJE A;  4XLP A;  3GTK A;  1WCM K;  2YU9 A;  4KB2 A;  2L5N A;  3GTP A;  2PA8 D;  4BLA A;  2Y0S L;  4M1X A;  4A3J K;  5IP9 K;  1WQG A;  3FOE A;  4P5B A;  2A68 A;  1WOR A;  4GTL A;  4C3H C;  2CFA B;  4XCH A;  2B63 K;  2Y0S D;  4BY7 C;  5IYB K;  1Y1W K;  1WOS A;  4A93 C;  3BP8 C;  3S15 C;  1J6W A;  5IYC C;  1TWA K;  3LYW A;  1O28 A;  4KN7 A;  1V5V A;  3GTO K;  4YFK A;  4RMF A;  5M5X K;  1F9N A;  3N0B A;  1WCM A;  5DM7 S;  5D4D A;  1Y1W C;  2GSO A;  1WSR A;  3S2D C;  4GTA A;  3GTO A;  4XSX A;  4BBR K;  5IYC K;  2ZJQ S; 
#chains in the Genus database with same CATH homology
 4G7O A;  1IW7 A;  4A3C K;  4QJV A;  1SFO C;  3GTQ C;  1Y1V C;  4G7Z A;  4AYB L;  4BY1 K;  3GTL C;  4A3E K;  4LLG A;  2JA5 C;  3PO2 C;  1I6H K;  2R7Z C;  4A3C C;  1I50 K;  1SMY A;  4A3K K;  1R9T K;  2NVY K;  4A3L C;  2WAQ L;  3CQZ K;  2NVT K;  4X6A C;  3H0G K;  5C4X K;  2PA8 L;  4KMU A;  3GTL K;  3H3V L;  1TWA C;  2R92 K;  3M3Y C;  3GTK K;  3HKZ D;  2A6E A;  4JK1 A;  2VUM K;  2B63 C;  1TWG K;  4C3I C;  3FKI K;  2NVX K;  4A3I K;  3S17 C;  3HOU C;  4A3F C;  4C3J K;  3GTP K;  3I4M K;  4C2M K;  4AYB D;  4A3E C;  4OIP A;  2E2H C;  4Y52 C;  2NVQ C;  1TWC C;  4OIO A;  2R92 C;  3S1Q K;  3I4M C;  3HOV C;  3S1R K;  1R9T C;  4G7H A;  4BBR C;  4Y52 K;  4A3I C;  2WAQ D;  4C3J C;  1TWF K;  1I6H C;  2A6H A;  3M3Y K;  2JA5 K;  1Y1V K;  3DXJ A;  1BDF A;  5FLM K;  5C4J C;  3RZO C;  3HOX C;  3S16 C;  2WB1 L;  5M5W K;  2YU9 K;  2NVY C;  2R93 C;  5IP9 C;  3EQL A;  3S2D K;  5IYD K;  2NVT C;  4KN4 A;  2O5I A;  1XPP A;  2JA7 C;  4GZY A;  4A3L K;  1I3Q C;  3RZD K;  3PO3 C;  5IP7 K;  2R93 K;  5IYD C;  4BY1 C;  5M3F K;  5C4J K;  2VUM C;  1SFO K;  2YU9 C;  4A3M K;  3M4O C;  4A93 K;  1TWH C;  4ZH4 A;  4A3B K;  4XSZ A;  4C2M C;  1YNJ A;  2PMZ D;  3S14 K;  3HOU K;  4BBS C;  1TWH K;  4OIN A;  2JA6 K;  2E2I K;  2WB1 D;  3S1Q C;  2PMZ L;  1K83 K;  3HOZ C;  5C44 K;  3RZD C;  4MEX A;  1TWF C;  1I3Q K;  4BBS K;  3CQZ C;  3S17 K;  3HKZ L;  1YNN A;  4QIW L;  3GTO C;  3K7A C;  4C3H K;  3HOX K;  4A3M C;  3S16 K;  5FLM C;  2O5J A;  3S15 K;  3H0G C;  5C4X C;  3HOZ K;  4YG2 A;  4A3D C;  3GTM C;  3HOY C;  3PO3 K;  3S1M C;  3GTP C;  4A3F K;  2JA6 C;  4LJZ A;  2JA8 C;  3FKI C;  5IP7 C;  4Y7N C;  3S1N K;  3S2H K;  2R7Z K;  3S1M K;  5TMF A;  2E2J C;  3HOW C;  4MEY A;  5C44 C;  4Q5S A;  4A3B C;  2CW0 A;  2E2H K;  4A3J C;  2NVQ K;  4XLP A;  2A69 A;  4X6A K;  3WOD A;  1WCM K;  5C3E K;  2JA8 K;  4NOI A;  4QIW D;  2E2I C;  2NVX C;  3S1N C;  4Y7N K;  3GTG C;  4A3G K;  2PA8 D;  1K83 C;  3H3V D;  2Y0S L;  4A3J K;  4A3D K;  5IP9 K;  3S1R C;  2A68 A;  3HOV K;  4LK1 A;  4BXX K;  4Q4Z A;  4LK0 A;  1I6V A;  3S2H C;  3I4N C;  4C3H C;  1ZYR A;  1TWC K;  3K7A K;  4OIQ A;  5FJ8 K;  2E2J K;  1TWG C;  2B63 K;  2Y0S D;  3PO2 K;  4BY7 C;  5IYB K;  3GTJ K;  1Y1W K;  4A93 C;  3M4O K;  3S15 C;  5C3E C;  3RZO K;  5M5Y K;  5IYC C;  4MQ9 A;  3GTK C;  1TWA K;  4KN7 A;  3HOW K;  2JA7 K;  3S14 C;  5IYB C;  4BY7 K;  3GTO K;  4XLN A;  4YFK A;  5M5X K;  1I50 C;  4BXX C;  4QJV B;  1WCM C;  4YFN A;  1HQM A;  4YFX A;  4C3I K;  3I4N K;  3GTM K;  3HOY K;  2BE5 A;  4OIR A;  5D4D A;  5M3M K;  3GTQ K;  3GTG K;  4A3G C;  3GTJ C;  1Y1W C;  3S2D C;  4XSX A;  2PPB A;  4BBR K;  4A3K C;  5IYC K;  5TMC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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