3PRPA

Structural analysis of a viral otu domain protease from the crimean-congo hemorrhagic fever virus in complex with human ubiquitin
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
161
structure length
161
Chain Sequence
DFLRSLDWTQVIAGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGDVFTAVNLLHSGQTHFDALRILPQFE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords L protein
publication title Structural analysis of a viral ovarian tumor domain protease from the crimean-congo hemorrhagic Fever virus in complex with covalently bonded ubiquitin.
pubmed doi rcsb
source organism Crimean-congo hemorrhagic fever virus
molecule tags Hydrolase/hydrolase
total genus 47
structure length 161
sequence length 161
chains with identical sequence C
ec nomenclature
pdb deposition date 2010-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02338 OTU OTU-like cysteine protease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.70.80 Alpha Beta Alpha-Beta Complex Cathepsin B; Chain A Cathepsin B; Chain A 3prpA00
4HXDB 3PHUA 3C0RA 4BOZA 3ZNHA 3PT2A 4BOSA 4BOUA 4BOQA 5JZEA 3PRPA 3TMPA 3PSEA 4BOPA 3PHWA 3PRMA 3PHXA 3BY4A
chains in the Genus database with same CATH superfamily
2PNSA 3HHAA 3F5VA 2FQ9A 1PXVA 4RF0A 3P5UA 4BOSA 3B79A 1AIMA 3PNRA 3IHPA 4PP1A 3V6EA 4D8IA 4OELA 4RKXA 1GMYA 3O0UA 3MORA 4N4ZA 2H7JA 4YYVA 2XU5A 4BS6A 8PCHA 3MP2A 1GCBA 1U5IA 3WXFA 1NB3A 4G54A 3W30A 7PCKA 2PREA 2G7YA 2P7UA 4IUMA 1KXRA 2PADA 3IUTA 2F1GA 2FUDA 3E9SA 4MI7A 5JH3A 3PT2A 4AXLA 2C0YA 2DC9A 2PBHA 3O1GA 3QJ3A 1TU6A 4HXDB 1GECE 3NHEA 4BOUA 2FO5A 4M0WA 3BPMA 4RF1A 3KSEA 2DCBA 3OF9A 4P6EA 1PE6A 4YYUA 5PADA 1Y4HA 1NLJA 2G6DA 2J7QC 2R9MA 1BP4A 1CB5A 3WXGA 5JZEA 1F2CA 2FE8A 3H7DA 5CHTA 1AU4A 4BS5A 2BTWB 2JRIA 4MZSA 2FYEA 3D6SA 4OVZB 1GLOA 1O0EA 3KWZA 2DCDA 2YJCA 4MM3B 2DCCA 2AIMA 4RNAA 3P5XA 1QMYA 3OVZA 3S3QA 4FK5A 5J94A 2HH5A 1AYUA 3N3KA 3OF8A 3H8CA 1U9XA 1U9VA 4YV8A 4I04A 1X9YA 2DJGB 4BOZA 1QOLA 5KO3A 3HWNA 1DEUA 3OQCA 4PI3A 4OVZA 2XU4A 4AXMA 3QT4A 2E00A 2JQFR 4YYWA 3B21A 3CBKA 1PPDA 3QSDA 4Q8HA 2P86A 1AYWA 3OISA 1PPNA 3N4CA 3MJ5A 4N8WA 4BSQA 1EF7A 4X6JA 1PCIA 1CSBB 2E03A 4I05A 2HD5A 3RVWA 4CDDB 4FIPA 1SP4B 4IP3A 1CTEA 2G8JA 2FRAA 5EZQA 2BDZA 1F29A 2DJFB 2R9CA 3KFQA 4FJCA 3PHUA 1ME3A 3LXSA 4CDFB 3K24A 2Z84A 3PHXA 9PAPA 1IWDA 2OP3A 1STFE 5EF4A 1F2BA 4D8BA 2IPPB 2BU3A 2FRQA 1KHQA 4W4UA 2VHFA 4QH6A 4I07A 1CQDA 2ARYA 5EZSA 4WA6A 2AUXA 1A6RA 3KX1A 3DF0A 3K8UA 2R6NA 3H6SA 2OULA 3PRMA 1MEGA 3ZUAA 4MSXA 3C9EA 2F7DA 2NQDB 2YJ9A 2HXZA 2CB5A 2CIOA 2B1NA 3BBAA 1KHPA 2XU3A 1AU0A 1YK8A 3IMAA 4W5BA 5CVMA 4PP2E 1CJLA 3BY4A 1ME4A 3ZNHA 1M6DA 6PADA 1QXPA 3E1ZB 4WURA 1PIPA 5EGWA 4ZTBA 1MHWA 3I06A 1ZIVA 3N3GA 3H8BA 1YZBA 2DC7A 3AI8A 3U8EA 3C0RA 4XUIA 3GCBA 1ATKA 1QDQA 4DMYA 2GHUA 1YALA 3BB7A 2DZYA 3RVVA 2AS8A 1EWLA 3P5WA 1AECA 1TL9A 2HWKA 3IEJA 2BTWA 1JQPA 2FT2A 1Y08A 4CDEB 4Q8GA 4XZXA 1S4VA 3USVA 2E01A 4D8EA 1BGOA 1YK7A 2B1MA 2JTCA 2R9NA 1TLOA 2AUZA 4CDCB 3I3TA 1AU3A 2AYNA 3BC3A 3BCNA 3MTVA 2VHSA 1NQCA 2P0RA 3M99A 1KFXL 4CZWA 5JA7A 1VSNA 1F2AA 3RNVA 2G8EA 3K9MA 4QRGA 3BWKA 3TRKA 1AYVA 2YJ8A 2ACTA 1EWOA 3OVXA 4OW0A 1UKFA 4REZA 2DZZA 2Y5BA 2DOSA 3KKUA 4HWYA 3BOWA 1ICFA 3KW9A 3MHHA 1PVJA 1EWMA 4YYQA 3PW3A 2JQGR 4X6HA 3V6CA 3IV2A 4YYRA 3S3RA 4QBBA 5CVOB 4P6GA 1PPPA 3PDFA 2J7QA 4BOQA 1CV8A 3PRPA 3PSEA 4PT5A 4W5CA 2YJ2A 4X6IA 1PBHA 3BPFA 4BOPA 1Q6KA 2R9FA 4YYSA 4A5UA 4BQVA 2Y6EA 2AYOA 1FH0A 1U9QX 3F75A 1BQIA 4XR7A 3WXEA 3MHSA 1MDWA 1EWPA 2NQIA 4ZUXU 3KWBX 1AU2A 1DKIA 1U9WA 2XU1A 4DMXA 5F02A 4PADA 3P5VA 1XKGA 3W31A 1HUCB 1K3BB 4P16A 2NQAA 1THEA 2AVWA 1YVBA 1NL6A 1YT7A 1MEMA 2AGAA 2O6XA 4N79A 2WBFX 5K16A 1NB5A 4QRVA 1PADA 1MIRA 2IBIA 1ZCMA 3TMPA 4K7CA 3PHWA 2HHNA 2UZJA 1CVZA 3CH3X 1PPOA 2GFOA 2DC8A 4KLBA 1CPJA 4YVAA 1POPA 2DC6A 1MS6A 3CH2X 1CS8A 2YJBA 3MTNA 3RVXA 4R3DA 1NPZA 3H89A 3HD3A 2FTDA 3IOQA 2E02A 2AU1A 5CHVA 4MZOA 4RY2A 2NQGA 5A24A 2R9OA 2ATOA 5E6JA 3HHIA 2BDLA 2OZ2A 4OEMA 1KFUL 3PBHA 3CBJA 3IFUA 1ITOA 1VJVA 3ERVA 2DCAA 3TNXA 4GUAA 3LFYA 1DF0A 4QRXA 5FPWA 1BY8A 5CVNB 1SNKA 4BPVA 3O65A
chains in the Genus database with same CATH topology
4A5UA 4OVZA 4RF0A 1YZBA 3B21A 3C0RA 4BOSA 4D8IA 4RKXA 3MJ5A 3BB7A 3MP2A 1DKIA 2HWKA 3W30A 2BTWA 3W31A 4IUMA 4IP3A 4P16A 5EZQA 4XZXA 2AGAA 3E9SA 4MI7A 3PT2A 3PHUA 4D8EA 2JTCA 2Z84A 3TMPA 3PHWA 3PHXA 4HXDB 4BOUA 2UZJA 3MTVA 4D8BA 4M0WA 2BU3A 4RF1A 3RNVA 2J7QC 5EZSA 3TRKA 5JZEA 2FE8A 2BTWB 2JRIA 4OW0A 1UKFA 4OVZB 4R3DA 4REZA 3PRMA 2DOSA 4MM3B 4RNAA 1PVJA 3BBAA 5E6JA 2J7QA 3IFUA 3BY4A 3ZNHA 4BOQA 4GUAA 3PRPA 4WURA 3PSEA 4PT5A 4BOZA 4ZTBA 5KO3A 4BOPA 3O65A 3OQCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4HXD B;  3PHU A;  3C0R A;  4BOZ A;  3ZNH A;  3PT2 A;  4BOS A;  4BOU A;  4BOQ A;  5JZE A;  3PRP A;  3TMP A;  3PSE A;  4BOP A;  3PHW A;  3PRM A;  3PHX A;  3BY4 A; 
#chains in the Genus database with same CATH topology
 2PNS A;  3HHA A;  3F5V A;  2FQ9 A;  1PXV A;  4RF0 A;  3P5U A;  4BOS A;  3B79 A;  1AIM A;  3PNR A;  3IHP A;  4PP1 A;  3V6E A;  4D8I A;  4OEL A;  4RKX A;  1GMY A;  3O0U A;  3MOR A;  4N4Z A;  2H7J A;  4YYV A;  2XU5 A;  4BS6 A;  8PCH A;  3MP2 A;  1GCB A;  1U5I A;  3WXF A;  1NB3 A;  4G54 A;  3W30 A;  7PCK A;  2PRE A;  2G7Y A;  2P7U A;  4IUM A;  1KXR A;  2PAD A;  3IUT A;  2F1G A;  2FUD A;  3E9S A;  4MI7 A;  5JH3 A;  3PT2 A;  4AXL A;  2C0Y A;  2DC9 A;  2PBH A;  3O1G A;  3QJ3 A;  1TU6 A;  4HXD B;  1GEC E;  3NHE A;  4BOU A;  2FO5 A;  4M0W A;  3BPM A;  4RF1 A;  3KSE A;  2DCB A;  3OF9 A;  4P6E A;  1PE6 A;  4YYU A;  5PAD A;  1Y4H A;  1NLJ A;  2G6D A;  2J7Q C;  2R9M A;  1BP4 A;  1CB5 A;  3WXG A;  5JZE A;  1F2C A;  2FE8 A;  3H7D A;  5CHT A;  1AU4 A;  4BS5 A;  2BTW B;  2JRI A;  4MZS A;  2FYE A;  3D6S A;  4OVZ B;  1GLO A;  1O0E A;  3KWZ A;  2DCD A;  2YJC A;  4MM3 B;  2DCC A;  2AIM A;  4RNA A;  3P5X A;  1QMY A;  3OVZ A;  3S3Q A;  4FK5 A;  5J94 A;  2HH5 A;  1AYU A;  3N3K A;  3OF8 A;  3H8C A;  1U9X A;  1U9V A;  4YV8 A;  4I04 A;  1X9Y A;  2DJG B;  4BOZ A;  1QOL A;  5KO3 A;  3HWN A;  1DEU A;  3OQC A;  4PI3 A;  4OVZ A;  2XU4 A;  4AXM A;  3QT4 A;  2E00 A;  2JQF R;  4YYW A;  3B21 A;  3CBK A;  1PPD A;  3QSD A;  4Q8H A;  2P86 A;  1AYW A;  3OIS A;  1PPN A;  3N4C A;  3MJ5 A;  4N8W A;  4BSQ A;  1EF7 A;  4X6J A;  1PCI A;  1CSB B;  2E03 A;  4I05 A;  2HD5 A;  3RVW A;  4CDD B;  4FIP A;  1SP4 B;  4IP3 A;  1CTE A;  2G8J A;  2FRA A;  5EZQ A;  2BDZ A;  1F29 A;  2DJF B;  2R9C A;  3KFQ A;  4FJC A;  3PHU A;  1ME3 A;  3LXS A;  4CDF B;  3K24 A;  2Z84 A;  3PHX A;  9PAP A;  1IWD A;  2OP3 A;  1STF E;  5EF4 A;  1F2B A;  4D8B A;  2IPP B;  2BU3 A;  2FRQ A;  1KHQ A;  4W4U A;  2VHF A;  4QH6 A;  4I07 A;  1CQD A;  2ARY A;  5EZS A;  4WA6 A;  2AUX A;  1A6R A;  3KX1 A;  3DF0 A;  3K8U A;  2R6N A;  3H6S A;  2OUL A;  3PRM A;  1MEG A;  3ZUA A;  4MSX A;  3C9E A;  2F7D A;  2NQD B;  2YJ9 A;  2HXZ A;  2CB5 A;  2CIO A;  2B1N A;  3BBA A;  1KHP A;  2XU3 A;  1AU0 A;  1YK8 A;  3IMA A;  4W5B A;  5CVM A;  4PP2 E;  1CJL A;  3BY4 A;  1ME4 A;  3ZNH A;  1M6D A;  6PAD A;  1QXP A;  3E1Z B;  4WUR A;  1PIP A;  5EGW A;  4ZTB A;  1MHW A;  3I06 A;  1ZIV A;  3N3G A;  3H8B A;  1YZB A;  2DC7 A;  3AI8 A;  3U8E A;  3C0R A;  4XUI A;  3GCB A;  1ATK A;  1QDQ A;  4DMY A;  2GHU A;  1YAL A;  3BB7 A;  2DZY A;  3RVV A;  2AS8 A;  1EWL A;  3P5W A;  1AEC A;  1TL9 A;  2HWK A;  3IEJ A;  2BTW A;  1JQP A;  2FT2 A;  1Y08 A;  4CDE B;  4Q8G A;  4XZX A;  1S4V A;  3USV A;  2E01 A;  4D8E A;  1BGO A;  1YK7 A;  2B1M A;  2JTC A;  2R9N A;  1TLO A;  2AUZ A;  4CDC B;  3I3T A;  1AU3 A;  2AYN A;  3BC3 A;  3BCN A;  3MTV A;  2VHS A;  1NQC A;  2P0R A;  3M99 A;  1KFX L;  4CZW A;  5JA7 A;  1VSN A;  1F2A A;  3RNV A;  2G8E A;  3K9M A;  4QRG A;  3BWK A;  3TRK A;  1AYV A;  2YJ8 A;  2ACT A;  1EWO A;  3OVX A;  4OW0 A;  1UKF A;  4REZ A;  2DZZ A;  2Y5B A;  2DOS A;  3KKU A;  4HWY A;  3BOW A;  1ICF A;  3KW9 A;  3MHH A;  1PVJ A;  1EWM A;  4YYQ A;  3PW3 A;  2JQG R;  4X6H A;  3V6C A;  3IV2 A;  4YYR A;  3S3R A;  4QBB A;  5CVO B;  4P6G A;  1PPP A;  3PDF A;  2J7Q A;  4BOQ A;  1CV8 A;  3PRP A;  3PSE A;  4PT5 A;  4W5C A;  2YJ2 A;  4X6I A;  1PBH A;  3BPF A;  4BOP A;  1Q6K A;  2R9F A;  4YYS A;  4A5U A;  4BQV A;  2Y6E A;  2AYO A;  1FH0 A;  1U9Q X;  3F75 A;  1BQI A;  4XR7 A;  3WXE A;  3MHS A;  1MDW A;  1EWP A;  2NQI A;  4ZUX U;  3KWB X;  1AU2 A;  1DKI A;  1U9W A;  2XU1 A;  4DMX A;  5F02 A;  4PAD A;  3P5V A;  1XKG A;  3W31 A;  1HUC B;  1K3B B;  4P16 A;  2NQA A;  1THE A;  2AVW A;  1YVB A;  1NL6 A;  1YT7 A;  1MEM A;  2AGA A;  2O6X A;  4N79 A;  2WBF X;  5K16 A;  1NB5 A;  4QRV A;  1PAD A;  1MIR A;  2IBI A;  1ZCM A;  3TMP A;  4K7C A;  3PHW A;  2HHN A;  2UZJ A;  1CVZ A;  3CH3 X;  1PPO A;  2GFO A;  2DC8 A;  4KLB A;  1CPJ A;  4YVA A;  1POP A;  2DC6 A;  1MS6 A;  3CH2 X;  1CS8 A;  2YJB A;  3MTN A;  3RVX A;  4R3D A;  1NPZ A;  3H89 A;  3HD3 A;  2FTD A;  3IOQ A;  2E02 A;  2AU1 A;  5CHV A;  4MZO A;  4RY2 A;  2NQG A;  5A24 A;  2R9O A;  2ATO A;  5E6J A;  3HHI A;  2BDL A;  2OZ2 A;  4OEM A;  1KFU L;  3PBH A;  3CBJ A;  3IFU A;  1ITO A;  1VJV A;  3ERV A;  2DCA A;  3TNX A;  4GUA A;  3LFY A;  1DF0 A;  4QRX A;  5FPW A;  1BY8 A;  5CVN B;  1SNK A;  4BPV A;  3O65 A; 
#chains in the Genus database with same CATH homology
 4A5U A;  4OVZ A;  4RF0 A;  1YZB A;  3B21 A;  3C0R A;  4BOS A;  4D8I A;  4RKX A;  3MJ5 A;  3BB7 A;  3MP2 A;  1DKI A;  2HWK A;  3W30 A;  2BTW A;  3W31 A;  4IUM A;  4IP3 A;  4P16 A;  5EZQ A;  4XZX A;  2AGA A;  3E9S A;  4MI7 A;  3PT2 A;  3PHU A;  4D8E A;  2JTC A;  2Z84 A;  3TMP A;  3PHW A;  3PHX A;  4HXD B;  4BOU A;  2UZJ A;  3MTV A;  4D8B A;  4M0W A;  2BU3 A;  4RF1 A;  3RNV A;  2J7Q C;  5EZS A;  3TRK A;  5JZE A;  2FE8 A;  2BTW B;  2JRI A;  4OW0 A;  1UKF A;  4OVZ B;  4R3D A;  4REZ A;  3PRM A;  2DOS A;  4MM3 B;  4RNA A;  1PVJ A;  3BBA A;  5E6J A;  2J7Q A;  3IFU A;  3BY4 A;  3ZNH A;  4BOQ A;  4GUA A;  3PRP A;  4WUR A;  3PSE A;  4PT5 A;  4BOZ A;  4ZTB A;  5KO3 A;  4BOP A;  3O65 A;  3OQC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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