1I6HI

Rna polymerase ii elongation complex
Total Genus 9

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYTIV1 (7-10)TII'1 (8-11)TIV3 (29-32)S2 (24-28)S1 (15-19)TIV2 (19-22)TI1 (20-23)S3 (35-37)TIV4 (30-33)TII1 (51-54)TVIII1 (47-50)TI2 (59-62)TIV6 (55-58)TI5 (103-106)3H1 (62-64)TI3 (65-68)S4 (83-87)TIV7 (75-78)TIV8 (76-79)S5 (99-103)TI4 (92-95)S6 (108-111)TI6 (104-107)TIV9 (113-116)Updating...
connected with : NaN
molecule tags Transcription/dna-rna hybrid
source organism Saccharomyces cerevisiae
publication title Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.
pubmed doi rcsb
molecule keywords 5'-D(P*AP*AP*AP*TP*GP*CP*CP*TP*GP*GP*TP*CP*T)-3'
total genus 9
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2001-03-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 1i6hI02
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 1i6hI01
1Y1VS 3GTMI 2E2JI 1USPA 4NBCA 2P3YA 5IP9I 3HOZI 2PK7A 4NBHA 5IP7I 4XX2A 3H0GI 3GKQA 4NOZA 3HOWI 3S16I 2JR6A 4A3MI 2JA5I 2JA8I 2NVTI 1I3QI 1X3ZA 4BY1I 1I6HI 3HOYI 1L1OC 4NBFA 4MH4A 4A3II 5C3EI 3VMGA 2YU9I 2DE6A 1TWCI 3S15I 3EERA 4A3FI 4A3BI 2DE7A 4NBAA 1X3WA 2NVQI 2B63I 3M4OI 3S1NI 2F4MA 4NBEA 1TFIA 2KPIA 1RO4A 4NB8A 3D6WA 2K5RA 3PO3S 2R93I 4BBRI 3I4NI 3S17I 3HOUI 2HF1A 4BY7I 3H3VJ 1R9TI 3LUSA 2JA6I 3Q87A 3K7AI 5C4XI 2E2II 4A3EI 1Y1VI 3GTJI 1QYPA 1ZB9A 4A3JI 3VMHA 2RBLA 4NB9A 3GTLI 2VUMI 3U50C 3PO2I 3FKII 2NVYI 1PFTA 1Y1WI 1TWHI 4BXXI 1ZB8A 3GTOI 3S1MI 2NVXI 1TWAI 1ML8A 2F4OA 1YUAA 5CM2M 4NBGA 1VLAA 3S2DI 2R7ZI 4Y7NI 1N2FA 3GTMS 1WCMI 4QTTA 4X6AI 4A3KI 2JNYA 3I07A 3GTQI 4NBBA 3VMIA 2BJOA 3ESWA 3I4MI 3PO3I 2J6AA 4NBDA 3GCFA 3S2HI 1I50I 2DE5A 2JS4A 2E2HI 4A93I 2AKLA 1K83I 3CQZI 3M3YI 4Y52I 3HOVI 3GTGI 5C4JI 5C44I 4BBSI 4A3GI 4A3LI 1TWFI 3VB9A 3HOXI 1SFOI 5FLMI 3S14I 1WW9A 3RZOI 4A3DI 1TWGI 3GTKI 4A3CI 1RLYA 1USPB 3S1QI 1LQLA 3RZDI 3GTPI 4QTUA 1NUIA 2R92I 1DL6A 2JA7I 3S1RI
chains in the Genus database with same CATH superfamily
1Y1VS 5FLXf 1RO0A 3KIFA 5IP9I 1YJNZ 3J80b 2KI7B 2PK7A 3HOWI 3CPWZ 2JA5I 2JMOA 4BY1I 1L1OC 2JIRA 3CCRZ 4NBFA 1Q822 2EGTA 1YITZ 4E2WA 1VQ81 4A3BI 4MD8A 4NBAA 2NVQI 5LL6f 2IZ3A 1Q16A 3FQQA 4NB8A 1YHQ1 3I4NI 3CC71 4MXUA 1VQ7Z 1K9M2 1KD12 4A3EI 3I561 3CCQ1 3JAMb 2V8IA 2QA4Z 3T4NB 3CCM1 2P28A 1VQ41 2YADA 4MRIA 1TWHI 1RQFA 3GTOI 1TWAI 3FQMA 2V8JA 3S2DI 1VLAA 3CCLZ 2GTIA 2QRDB 2JNYA 3CC2Z 3CCJZ 1QVGZ 1VQ5Z 1QVGY 4E31A 3I4MI 4DK1A 3PO3I 3TE5B 3VTNA 3CCU1 2PMZA 1Q812 2PM9A 4RVHA 1M1K2 1VQL1 3CCS1 2JS4A 2NAPA 3CQZI 2RHBA 3M3YI 3G6EZ 4RVFA 4A3LI 3S14I 1KRLA 4A3DI 2OZKA 3CCV1 1YJ9Z 1Y8CA 1USPB 3BG1B 3J81b 1NJI2 3S1QI 1LQLA 1VQPZ 3GTPI 2Y0SA 3S1RI 1K8A1 2JUBA 4RVDA 1USPA 1YIJZ 4NBCA 2P3YA 5T64A 4S1TA 4EWCA 1VQ61 3HOZI 2JIQA 1WJ2A 4NBHA 5IP7I 3H0GI 3GKQA 2K3RA 2NVTI 1I3QI 4RS4A 1NP6A 2YU9I 3D2LA 3IX0A 3I55Z 4E33A 1W2BZ 3NDJA 3CME1 1W2BY 1TFIA 2KPIA 5D1OB 2JIPA 3D6WA 4BBRI 1KC82 3S17I 2V45A 4E32A 5AN9F 3D9XA 1WIIA 4E30A 1Q821 5C4XI 1Y1VI 3GTJI 5D1OA 5IT9b 2RBLA 3J81f 3CCEZ 2IZ4A 3PO2I 2VPYA 2I3CA 2VUGA 1VQ91 1Y1WI 3MZKB 2O4HA 1ZB8A 1K9M1 5A2Qb 1KD11 2F4OA 2M6NA 4HGYA 1YUAA 5T6BA 3CCL1 4Y7NI 3CC21 3GTMS 1WCMI 2V3VA 3CMAZ 3G711 3CCJ1 4A3KI 3GTQI 1YJWZ 4NBBA 1Q862 2OTLZ 1WZNA 2BJOA 3NFZA 2JIOA 3J7A4 1YI2Z 2OOXB 2Q4ZA 3S2HI 1K732 3NH5A 3IF8A 2VPZA 4A93I 2E2HI 2AKLA 4Y52I 1VQN1 2OTJ1 1TWFI 2E7ZA 3VB9A 3J80f 5FLMI 1VQO1 2RPRA 1WW9A 1SIWA 3F3FC 1VQK1 2VF1A 3CC41 1QVFZ 1QVFY 2WAQA 1Q811 1FDIA 1S72Z 3MONA 1M1K1 1NUIA 2R92I 4TNUA 2JA7I 2QREB 1VQMZ 1VQ8Z 3CXCZ 3CXCY 3QWUA 2E2JI 4NH1C 5A2Qf 3CC7Z 4NOZA 2LFUA 2JR6A 1NJI1 2QEX1 1M902 3I56Z 1X3ZA 3CCQZ 3EEDA 1I6HI 1ZH1A 3HOYI 1Q7Y1 5C3EI 3VMGA 3JAMf 3CCMZ 2E9HA 1TWCI 3EERA 4A3FI 1VQ4Z 2AYDA 5FLXb 3CD61 2M48A 2B63I 2F4MA 1RO4A 1YJN1 1FDOA 1RO2A 3H3VJ 2RT9A 2JA6I 3K7AI 2V8KA 2G2KA 3CCR1 4NB9A 3CCE1 2VUMI 1YIT1 3FKII 4RV9A 2NVYI 1AA6A 1PFTA 1KC81 3TDHB 4BXXI 3S1MI 3CCSZ 2VPXA 1ML8A 5CM2M 1VQ71 2WB1A 4X6AI 4QTTA 3I07A 3CCVZ 4RVGA 1N8R2 2W03A 3VMIA 4E2ZA 2VPWA 2QR1B 4MD7A 2QA41 4NBDA 1QF8A 3NH8A 3GCFA 1I50I 2DE5A 1Z01A 1KQSZ 1KQSY 1JWHC 3F3PC 1VQ6Z 4BBSI 5C4JI 1QXFA 3NH4A 2H85A 3G4SZ 1Q861 4DGLA 1SFOI 3CPWY 1TWGI 3GTKI 4A3CI 2LEXA 1RLYA 4MD9A 1VQ51 1S721 1P9NA 1K731 2ZAEB 3RZDI 2IV2X 4QTUA 1YUKA 1VQM1 1DL6A 3P5JB 3GTMI 3CMEZ 3HKZA 4AYBA 3G6E1 2GU2A 1RNIA 4E2XA 2GTHA 4XX2A 3S16I 2HU9A 3NDIA 3MZLB 4E2YA 4A3MI 5D1PA 2JA8I 1YJ91 4MH4A 1VQP1 4A3II 1S7MA 5IT9f 2DE6A 3S15I 1VQ9Z 2DE7A 1X3WA 3M4OI 3S1NI 4HH4A 4NBEA 2LIYA 1YIJ1 3PO3S 2R93I 2K5RA 3KIHA 1YHQZ 1M901 2W04A 3HOUI 2HF1A 4BY7I 1R9TI 3LUSA 3G71Z 3Q87A 3OW2Z 3OW2Y 2E2II 1QYPA 1ZB9A 2QRCB 3IR7A 4A3JI 3VMHA 3GTLI 3U50C 3I551 2R6MA 4NFRA 4CL1A 2NVXI 5T67A 4NBGA 1VQNZ 2R7ZI 2OTJZ 1VQOZ 1N2FA 2JIMA 2OOYB 1VQKZ 3CC4Z 1Z03A 3ESWA 2J6AA 1Q7Y2 2Q51A 3CCUZ 1JJ2Z 1K83I 1VQLZ 1JJ2Y 4HGZA 3HOVI 3IFUA 3G4S1 1K8A2 3GTGI 5C44I 1N8R1 4A3GI 3HOXI 3RZOI 3CMA1 2QEXZ 1YJW1 4MONA 4DQYB 2OTL1 3BG0B 2QLVB 1YI21 1Z02A 2O53A 1X0TA 3CD6Z 2QKDA 2RIQA
chains in the Genus database with same CATH topology
1Y1VS 5FLXf 1RO0A 3KIFA 5IP9I 1YJNZ 3J80b 2KI7B 2PK7A 3HOWI 3CPWZ 2JA5I 2JMOA 4BY1I 1L1OC 3CCRZ 4NBFA 1Q822 2EGTA 1YITZ 4E2WA 1VQ81 4A3BI 4MD8A 4NBAA 2NVQI 5LL6f 2IZ3A 3FQQA 4NB8A 1YHQ1 3I4NI 3CC71 4MXUA 1VQ7Z 1K9M2 1KD12 4A3EI 3I561 3CCQ1 3JAMb 2V8IA 2QA4Z 3T4NB 3CCM1 2P28A 1VQ41 2YADA 4MRIA 1TWHI 1RQFA 3GTOI 1TWAI 3FQMA 2V8JA 3S2DI 1VLAA 3CCLZ 2GTIA 2QRDB 2JNYA 3CC2Z 3CCJZ 1QVGZ 1VQ5Z 1QVGY 4E31A 3I4MI 4DK1A 3PO3I 3TE5B 3VTNA 3CCU1 2PMZA 1Q812 2PM9A 4RVHA 1M1K2 1VQL1 3CCS1 2JS4A 3CQZI 2RHBA 3M3YI 3G6EZ 4RVFA 4A3LI 3S14I 1KRLA 4A3DI 2OZKA 3CCV1 1YJ9Z 1USPB 3BG1B 3J81b 1NJI2 3S1QI 1LQLA 1VQPZ 3GTPI 2Y0SA 3S1RI 1K8A1 2JUBA 4RVDA 1USPA 1YIJZ 4NBCA 2P3YA 5T64A 4S1TA 4EWCA 1VQ61 3HOZI 4NBHA 5IP7I 3H0GI 3GKQA 2K3RA 2NVTI 1I3QI 4RS4A 1NP6A 2YU9I 3IX0A 3I55Z 4E33A 1W2BZ 3NDJA 3CME1 1W2BY 1TFIA 2KPIA 5D1OB 3D6WA 4BBRI 1KC82 3S17I 4E32A 5AN9F 3D9XA 1WIIA 4E30A 1Q821 5C4XI 1Y1VI 3GTJI 5D1OA 5IT9b 2RBLA 3J81f 3CCEZ 2IZ4A 3PO2I 2I3CA 2VUGA 1VQ91 1Y1WI 3MZKB 2O4HA 1ZB8A 1K9M1 5A2Qb 1KD11 2F4OA 2M6NA 4HGYA 1YUAA 5T6BA 3CCL1 4Y7NI 3CC21 3GTMS 1WCMI 3CMAZ 3G711 3CCJ1 4A3KI 3GTQI 1YJWZ 4NBBA 1Q862 2OTLZ 2BJOA 3NFZA 3J7A4 1YI2Z 2OOXB 2Q4ZA 3S2HI 1K732 3NH5A 3IF8A 4A93I 2E2HI 2AKLA 4Y52I 1VQN1 2OTJ1 1TWFI 3VB9A 3J80f 1VQO1 5FLMI 2RPRA 1WW9A 3F3FC 1VQK1 2VF1A 3CC41 1QVFZ 1QVFY 2WAQA 1Q811 1S72Z 3MONA 1M1K1 1NUIA 2R92I 4TNUA 2JA7I 2QREB 1VQMZ 1VQ8Z 3CXCZ 3CXCY 3QWUA 2E2JI 4NH1C 5A2Qf 3CC7Z 4NOZA 2LFUA 2JR6A 1NJI1 2QEX1 1M902 3I56Z 1X3ZA 3CCQZ 3EEDA 1I6HI 1ZH1A 3HOYI 1Q7Y1 5C3EI 3VMGA 3JAMf 3CCMZ 2E9HA 1TWCI 3EERA 4A3FI 1VQ4Z 5FLXb 3CD61 2M48A 2B63I 2F4MA 1RO4A 1YJN1 1RO2A 3H3VJ 2RT9A 2JA6I 3K7AI 2V8KA 2G2KA 3CCR1 4NB9A 3CCE1 2VUMI 1YIT1 3FKII 4RV9A 2NVYI 1PFTA 1KC81 3TDHB 4BXXI 3S1MI 3CCSZ 1ML8A 5CM2M 1VQ71 2WB1A 4X6AI 4QTTA 3I07A 3CCVZ 4RVGA 1N8R2 2W03A 3VMIA 4E2ZA 2QR1B 4MD7A 2QA41 4NBDA 1QF8A 3NH8A 3GCFA 1I50I 2DE5A 1Z01A 1KQSZ 1KQSY 1JWHC 3F3PC 1VQ6Z 4BBSI 5C4JI 3NH4A 2H85A 3G4SZ 1Q861 4DGLA 1SFOI 3CPWY 1TWGI 3GTKI 4A3CI 1RLYA 4MD9A 1VQ51 1S721 1P9NA 1K731 2ZAEB 3RZDI 4QTUA 1YUKA 1VQM1 1DL6A 3P5JB 3GTMI 3CMEZ 3HKZA 4AYBA 3G6E1 2GU2A 1RNIA 4E2XA 2GTHA 4XX2A 3S16I 2HU9A 3NDIA 3MZLB 4E2YA 4A3MI 5D1PA 2JA8I 1YJ91 4MH4A 1VQP1 4A3II 1S7MA 5IT9f 2DE6A 3S15I 1VQ9Z 2DE7A 1X3WA 3M4OI 3S1NI 4HH4A 4NBEA 2LIYA 1YIJ1 3PO3S 2R93I 2K5RA 3KIHA 1YHQZ 1M901 2W04A 3HOUI 2HF1A 4BY7I 1R9TI 3LUSA 3G71Z 3Q87A 3OW2Z 3OW2Y 2E2II 1QYPA 1ZB9A 2QRCB 4A3JI 3VMHA 3GTLI 3U50C 3I551 2R6MA 4NFRA 4CL1A 2NVXI 5T67A 4NBGA 1VQNZ 2R7ZI 2OTJZ 1VQOZ 1N2FA 2OOYB 1VQKZ 3CC4Z 1Z03A 3ESWA 2J6AA 1Q7Y2 2Q51A 3CCUZ 1JJ2Z 1K83I 1VQLZ 1JJ2Y 4HGZA 3HOVI 3IFUA 3G4S1 1K8A2 3GTGI 5C44I 1N8R1 4A3GI 3HOXI 3RZOI 3CMA1 2QEXZ 1YJW1 4MONA 4DQYB 2OTL1 3BG0B 2QLVB 1YI21 1Z02A 2O53A 1X0TA 3CD6Z 2QKDA 2RIQA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1Y1V S;  3GTM I;  2E2J I;  1USP A;  4NBC A;  2P3Y A;  5IP9 I;  3HOZ I;  2PK7 A;  4NBH A;  5IP7 I;  4XX2 A;  3H0G I;  3GKQ A;  4NOZ A;  3HOW I;  3S16 I;  2JR6 A;  4A3M I;  2JA5 I;  2JA8 I;  2NVT I;  1I3Q I;  1X3Z A;  4BY1 I;  1I6H I;  3HOY I;  1L1O C;  4NBF A;  4MH4 A;  4A3I I;  5C3E I;  3VMG A;  2YU9 I;  2DE6 A;  1TWC I;  3S15 I;  3EER A;  4A3F I;  4A3B I;  2DE7 A;  4NBA A;  1X3W A;  2NVQ I;  2B63 I;  3M4O I;  3S1N I;  2F4M A;  4NBE A;  1TFI A;  2KPI A;  1RO4 A;  4NB8 A;  3D6W A;  2K5R A;  3PO3 S;  2R93 I;  4BBR I;  3I4N I;  3S17 I;  3HOU I;  2HF1 A;  4BY7 I;  3H3V J;  1R9T I;  3LUS A;  2JA6 I;  3Q87 A;  3K7A I;  5C4X I;  2E2I I;  4A3E I;  1Y1V I;  3GTJ I;  1QYP A;  1ZB9 A;  4A3J I;  3VMH A;  2RBL A;  4NB9 A;  3GTL I;  2VUM I;  3U50 C;  3PO2 I;  3FKI I;  2NVY I;  1PFT A;  1Y1W I;  1TWH I;  4BXX I;  1ZB8 A;  3GTO I;  3S1M I;  2NVX I;  1TWA I;  1ML8 A;  2F4O A;  1YUA A;  5CM2 M;  4NBG A;  1VLA A;  3S2D I;  2R7Z I;  4Y7N I;  1N2F A;  3GTM S;  1WCM I;  4QTT A;  4X6A I;  4A3K I;  2JNY A;  3I07 A;  3GTQ I;  4NBB A;  3VMI A;  2BJO A;  3ESW A;  3I4M I;  3PO3 I;  2J6A A;  4NBD A;  3GCF A;  3S2H I;  1I50 I;  2DE5 A;  2JS4 A;  2E2H I;  4A93 I;  2AKL A;  1K83 I;  3CQZ I;  3M3Y I;  4Y52 I;  3HOV I;  3GTG I;  5C4J I;  5C44 I;  4BBS I;  4A3G I;  4A3L I;  1TWF I;  3VB9 A;  3HOX I;  1SFO I;  5FLM I;  3S14 I;  1WW9 A;  3RZO I;  4A3D I;  1TWG I;  3GTK I;  4A3C I;  1RLY A;  1USP B;  3S1Q I;  1LQL A;  3RZD I;  3GTP I;  4QTU A;  1NUI A;  2R92 I;  1DL6 A;  2JA7 I;  3S1R I; 
#chains in the Genus database with same CATH topology
 1Y1V S;  5FLX f;  1RO0 A;  3KIF A;  5IP9 I;  1YJN Z;  3J80 b;  2KI7 B;  2PK7 A;  3HOW I;  3CPW Z;  2JA5 I;  2JMO A;  4BY1 I;  1L1O C;  2JIR A;  3CCR Z;  4NBF A;  1Q82 2;  2EGT A;  1YIT Z;  4E2W A;  1VQ8 1;  4A3B I;  4MD8 A;  4NBA A;  2NVQ I;  5LL6 f;  2IZ3 A;  1Q16 A;  3FQQ A;  4NB8 A;  1YHQ 1;  3I4N I;  3CC7 1;  4MXU A;  1VQ7 Z;  1K9M 2;  1KD1 2;  4A3E I;  3I56 1;  3CCQ 1;  3JAM b;  2V8I A;  2QA4 Z;  3T4N B;  3CCM 1;  2P28 A;  1VQ4 1;  2YAD A;  4MRI A;  1TWH I;  1RQF A;  3GTO I;  1TWA I;  3FQM A;  2V8J A;  3S2D I;  1VLA A;  3CCL Z;  2GTI A;  2QRD B;  2JNY A;  3CC2 Z;  3CCJ Z;  1QVG Z;  1VQ5 Z;  1QVG Y;  4E31 A;  3I4M I;  4DK1 A;  3PO3 I;  3TE5 B;  3VTN A;  3CCU 1;  2PMZ A;  1Q81 2;  2PM9 A;  4RVH A;  1M1K 2;  1VQL 1;  3CCS 1;  2JS4 A;  2NAP A;  3CQZ I;  2RHB A;  3M3Y I;  3G6E Z;  4RVF A;  4A3L I;  3S14 I;  1KRL A;  4A3D I;  2OZK A;  3CCV 1;  1YJ9 Z;  1Y8C A;  1USP B;  3BG1 B;  3J81 b;  1NJI 2;  3S1Q I;  1LQL A;  1VQP Z;  3GTP I;  2Y0S A;  3S1R I;  1K8A 1;  2JUB A;  4RVD A;  1USP A;  1YIJ Z;  4NBC A;  2P3Y A;  5T64 A;  4S1T A;  4EWC A;  1VQ6 1;  3HOZ I;  2JIQ A;  1WJ2 A;  4NBH A;  5IP7 I;  3H0G I;  3GKQ A;  2K3R A;  2NVT I;  1I3Q I;  4RS4 A;  1NP6 A;  2YU9 I;  3D2L A;  3IX0 A;  3I55 Z;  4E33 A;  1W2B Z;  3NDJ A;  3CME 1;  1W2B Y;  1TFI A;  2KPI A;  5D1O B;  2JIP A;  3D6W A;  4BBR I;  1KC8 2;  3S17 I;  2V45 A;  4E32 A;  5AN9 F;  3D9X A;  1WII A;  4E30 A;  1Q82 1;  5C4X I;  1Y1V I;  3GTJ I;  5D1O A;  5IT9 b;  2RBL A;  3J81 f;  3CCE Z;  2IZ4 A;  3PO2 I;  2VPY A;  2I3C A;  2VUG A;  1VQ9 1;  1Y1W I;  3MZK B;  2O4H A;  1ZB8 A;  1K9M 1;  5A2Q b;  1KD1 1;  2F4O A;  2M6N A;  4HGY A;  1YUA A;  5T6B A;  3CCL 1;  4Y7N I;  3CC2 1;  3GTM S;  1WCM I;  2V3V A;  3CMA Z;  3G71 1;  3CCJ 1;  4A3K I;  3GTQ I;  1YJW Z;  4NBB A;  1Q86 2;  2OTL Z;  1WZN A;  2BJO A;  3NFZ A;  2JIO A;  3J7A 4;  1YI2 Z;  2OOX B;  2Q4Z A;  3S2H I;  1K73 2;  3NH5 A;  3IF8 A;  2VPZ A;  4A93 I;  2E2H I;  2AKL A;  4Y52 I;  1VQN 1;  2OTJ 1;  1TWF I;  2E7Z A;  3VB9 A;  3J80 f;  5FLM I;  1VQO 1;  2RPR A;  1WW9 A;  1SIW A;  3F3F C;  1VQK 1;  2VF1 A;  3CC4 1;  1QVF Z;  1QVF Y;  2WAQ A;  1Q81 1;  1FDI A;  1S72 Z;  3MON A;  1M1K 1;  1NUI A;  2R92 I;  4TNU A;  2JA7 I;  2QRE B;  1VQM Z;  1VQ8 Z;  3CXC Z;  3CXC Y;  3QWU A;  2E2J I;  4NH1 C;  5A2Q f;  3CC7 Z;  4NOZ A;  2LFU A;  2JR6 A;  1NJI 1;  2QEX 1;  1M90 2;  3I56 Z;  1X3Z A;  3CCQ Z;  3EED A;  1I6H I;  1ZH1 A;  3HOY I;  1Q7Y 1;  5C3E I;  3VMG A;  3JAM f;  3CCM Z;  2E9H A;  1TWC I;  3EER A;  4A3F I;  1VQ4 Z;  2AYD A;  5FLX b;  3CD6 1;  2M48 A;  2B63 I;  2F4M A;  1RO4 A;  1YJN 1;  1FDO A;  1RO2 A;  3H3V J;  2RT9 A;  2JA6 I;  3K7A I;  2V8K A;  2G2K A;  3CCR 1;  4NB9 A;  3CCE 1;  2VUM I;  1YIT 1;  3FKI I;  4RV9 A;  2NVY I;  1AA6 A;  1PFT A;  1KC8 1;  3TDH B;  4BXX I;  3S1M I;  3CCS Z;  2VPX A;  1ML8 A;  5CM2 M;  1VQ7 1;  2WB1 A;  4X6A I;  4QTT A;  3I07 A;  3CCV Z;  4RVG A;  1N8R 2;  2W03 A;  3VMI A;  4E2Z A;  2VPW A;  2QR1 B;  4MD7 A;  2QA4 1;  4NBD A;  1QF8 A;  3NH8 A;  3GCF A;  1I50 I;  2DE5 A;  1Z01 A;  1KQS Z;  1KQS Y;  1JWH C;  3F3P C;  1VQ6 Z;  4BBS I;  5C4J I;  1QXF A;  3NH4 A;  2H85 A;  3G4S Z;  1Q86 1;  4DGL A;  1SFO I;  3CPW Y;  1TWG I;  3GTK I;  4A3C I;  2LEX A;  1RLY A;  4MD9 A;  1VQ5 1;  1S72 1;  1P9N A;  1K73 1;  2ZAE B;  3RZD I;  2IV2 X;  4QTU A;  1YUK A;  1VQM 1;  1DL6 A;  3P5J B;  3GTM I;  3CME Z;  3HKZ A;  4AYB A;  3G6E 1;  2GU2 A;  1RNI A;  4E2X A;  2GTH A;  4XX2 A;  3S16 I;  2HU9 A;  3NDI A;  3MZL B;  4E2Y A;  4A3M I;  5D1P A;  2JA8 I;  1YJ9 1;  4MH4 A;  1VQP 1;  4A3I I;  1S7M A;  5IT9 f;  2DE6 A;  3S15 I;  1VQ9 Z;  2DE7 A;  1X3W A;  3M4O I;  3S1N I;  4HH4 A;  4NBE A;  2LIY A;  1YIJ 1;  3PO3 S;  2R93 I;  2K5R A;  3KIH A;  1YHQ Z;  1M90 1;  2W04 A;  3HOU I;  2HF1 A;  4BY7 I;  1R9T I;  3LUS A;  3G71 Z;  3Q87 A;  3OW2 Z;  3OW2 Y;  2E2I I;  1QYP A;  1ZB9 A;  2QRC B;  3IR7 A;  4A3J I;  3VMH A;  3GTL I;  3U50 C;  3I55 1;  2R6M A;  4NFR A;  4CL1 A;  2NVX I;  5T67 A;  4NBG A;  1VQN Z;  2R7Z I;  2OTJ Z;  1VQO Z;  1N2F A;  2JIM A;  2OOY B;  1VQK Z;  3CC4 Z;  1Z03 A;  3ESW A;  2J6A A;  1Q7Y 2;  2Q51 A;  3CCU Z;  1JJ2 Z;  1K83 I;  1VQL Z;  1JJ2 Y;  4HGZ A;  3HOV I;  3IFU A;  3G4S 1;  1K8A 2;  3GTG I;  5C44 I;  1N8R 1;  4A3G I;  3HOX I;  3RZO I;  3CMA 1;  2QEX Z;  1YJW 1;  4MON A;  4DQY B;  2OTL 1;  3BG0 B;  2QLV B;  1YI2 1;  1Z02 A;  2O53 A;  1X0T A;  3CD6 Z;  2QKD A;  2RIQ A; 
#chains in the Genus database with same CATH homology
 1Y1V S;  5FLX f;  1RO0 A;  3KIF A;  5IP9 I;  1YJN Z;  3J80 b;  2KI7 B;  2PK7 A;  3HOW I;  3CPW Z;  2JA5 I;  2JMO A;  4BY1 I;  1L1O C;  3CCR Z;  4NBF A;  1Q82 2;  2EGT A;  1YIT Z;  4E2W A;  1VQ8 1;  4A3B I;  4MD8 A;  4NBA A;  2NVQ I;  5LL6 f;  2IZ3 A;  3FQQ A;  4NB8 A;  1YHQ 1;  3I4N I;  3CC7 1;  4MXU A;  1VQ7 Z;  1K9M 2;  1KD1 2;  4A3E I;  3I56 1;  3CCQ 1;  3JAM b;  2V8I A;  2QA4 Z;  3T4N B;  3CCM 1;  2P28 A;  1VQ4 1;  2YAD A;  4MRI A;  1TWH I;  1RQF A;  3GTO I;  1TWA I;  3FQM A;  2V8J A;  3S2D I;  1VLA A;  3CCL Z;  2GTI A;  2QRD B;  2JNY A;  3CC2 Z;  3CCJ Z;  1QVG Z;  1VQ5 Z;  1QVG Y;  4E31 A;  3I4M I;  4DK1 A;  3PO3 I;  3TE5 B;  3VTN A;  3CCU 1;  2PMZ A;  1Q81 2;  2PM9 A;  4RVH A;  1M1K 2;  1VQL 1;  3CCS 1;  2JS4 A;  3CQZ I;  2RHB A;  3M3Y I;  3G6E Z;  4RVF A;  4A3L I;  3S14 I;  1KRL A;  4A3D I;  2OZK A;  3CCV 1;  1YJ9 Z;  1USP B;  3BG1 B;  3J81 b;  1NJI 2;  3S1Q I;  1LQL A;  1VQP Z;  3GTP I;  2Y0S A;  3S1R I;  1K8A 1;  2JUB A;  4RVD A;  1USP A;  1YIJ Z;  4NBC A;  2P3Y A;  5T64 A;  4S1T A;  4EWC A;  1VQ6 1;  3HOZ I;  4NBH A;  5IP7 I;  3H0G I;  3GKQ A;  2K3R A;  2NVT I;  1I3Q I;  4RS4 A;  1NP6 A;  2YU9 I;  3IX0 A;  3I55 Z;  4E33 A;  1W2B Z;  3NDJ A;  3CME 1;  1W2B Y;  1TFI A;  2KPI A;  5D1O B;  3D6W A;  4BBR I;  1KC8 2;  3S17 I;  4E32 A;  5AN9 F;  3D9X A;  1WII A;  4E30 A;  1Q82 1;  5C4X I;  1Y1V I;  3GTJ I;  5D1O A;  5IT9 b;  2RBL A;  3J81 f;  3CCE Z;  2IZ4 A;  3PO2 I;  2I3C A;  2VUG A;  1VQ9 1;  1Y1W I;  3MZK B;  2O4H A;  1ZB8 A;  1K9M 1;  5A2Q b;  1KD1 1;  2F4O A;  2M6N A;  4HGY A;  1YUA A;  5T6B A;  3CCL 1;  4Y7N I;  3CC2 1;  3GTM S;  1WCM I;  3CMA Z;  3G71 1;  3CCJ 1;  4A3K I;  3GTQ I;  1YJW Z;  4NBB A;  1Q86 2;  2OTL Z;  2BJO A;  3NFZ A;  3J7A 4;  1YI2 Z;  2OOX B;  2Q4Z A;  3S2H I;  1K73 2;  3NH5 A;  3IF8 A;  4A93 I;  2E2H I;  2AKL A;  4Y52 I;  1VQN 1;  2OTJ 1;  1TWF I;  3VB9 A;  3J80 f;  1VQO 1;  5FLM I;  2RPR A;  1WW9 A;  3F3F C;  1VQK 1;  2VF1 A;  3CC4 1;  1QVF Z;  1QVF Y;  2WAQ A;  1Q81 1;  1S72 Z;  3MON A;  1M1K 1;  1NUI A;  2R92 I;  4TNU A;  2JA7 I;  2QRE B;  1VQM Z;  1VQ8 Z;  3CXC Z;  3CXC Y;  3QWU A;  2E2J I;  4NH1 C;  5A2Q f;  3CC7 Z;  4NOZ A;  2LFU A;  2JR6 A;  1NJI 1;  2QEX 1;  1M90 2;  3I56 Z;  1X3Z A;  3CCQ Z;  3EED A;  1I6H I;  1ZH1 A;  3HOY I;  1Q7Y 1;  5C3E I;  3VMG A;  3JAM f;  3CCM Z;  2E9H A;  1TWC I;  3EER A;  4A3F I;  1VQ4 Z;  5FLX b;  3CD6 1;  2M48 A;  2B63 I;  2F4M A;  1RO4 A;  1YJN 1;  1RO2 A;  3H3V J;  2RT9 A;  2JA6 I;  3K7A I;  2V8K A;  2G2K A;  3CCR 1;  4NB9 A;  3CCE 1;  2VUM I;  1YIT 1;  3FKI I;  4RV9 A;  2NVY I;  1PFT A;  1KC8 1;  3TDH B;  4BXX I;  3S1M I;  3CCS Z;  1ML8 A;  5CM2 M;  1VQ7 1;  2WB1 A;  4X6A I;  4QTT A;  3I07 A;  3CCV Z;  4RVG A;  1N8R 2;  2W03 A;  3VMI A;  4E2Z A;  2QR1 B;  4MD7 A;  2QA4 1;  4NBD A;  1QF8 A;  3NH8 A;  3GCF A;  1I50 I;  2DE5 A;  1Z01 A;  1KQS Z;  1KQS Y;  1JWH C;  3F3P C;  1VQ6 Z;  4BBS I;  5C4J I;  3NH4 A;  2H85 A;  3G4S Z;  1Q86 1;  4DGL A;  1SFO I;  3CPW Y;  1TWG I;  3GTK I;  4A3C I;  1RLY A;  4MD9 A;  1VQ5 1;  1S72 1;  1P9N A;  1K73 1;  2ZAE B;  3RZD I;  4QTU A;  1YUK A;  1VQM 1;  1DL6 A;  3P5J B;  3GTM I;  3CME Z;  3HKZ A;  4AYB A;  3G6E 1;  2GU2 A;  1RNI A;  4E2X A;  2GTH A;  4XX2 A;  3S16 I;  2HU9 A;  3NDI A;  3MZL B;  4E2Y A;  4A3M I;  5D1P A;  2JA8 I;  1YJ9 1;  4MH4 A;  1VQP 1;  4A3I I;  1S7M A;  5IT9 f;  2DE6 A;  3S15 I;  1VQ9 Z;  2DE7 A;  1X3W A;  3M4O I;  3S1N I;  4HH4 A;  4NBE A;  2LIY A;  1YIJ 1;  3PO3 S;  2R93 I;  2K5R A;  3KIH A;  1YHQ Z;  1M90 1;  2W04 A;  3HOU I;  2HF1 A;  4BY7 I;  1R9T I;  3LUS A;  3G71 Z;  3Q87 A;  3OW2 Z;  3OW2 Y;  2E2I I;  1QYP A;  1ZB9 A;  2QRC B;  4A3J I;  3VMH A;  3GTL I;  3U50 C;  3I55 1;  2R6M A;  4NFR A;  4CL1 A;  2NVX I;  5T67 A;  4NBG A;  1VQN Z;  2R7Z I;  2OTJ Z;  1VQO Z;  1N2F A;  2OOY B;  1VQK Z;  3CC4 Z;  1Z03 A;  3ESW A;  2J6A A;  1Q7Y 2;  2Q51 A;  3CCU Z;  1JJ2 Z;  1K83 I;  1VQL Z;  1JJ2 Y;  4HGZ A;  3HOV I;  3IFU A;  3G4S 1;  1K8A 2;  3GTG I;  5C44 I;  1N8R 1;  4A3G I;  3HOX I;  3RZO I;  3CMA 1;  2QEX Z;  1YJW 1;  4MON A;  4DQY B;  2OTL 1;  3BG0 B;  2QLV B;  1YI2 1;  1Z02 A;  2O53 A;  1X0T A;  3CD6 Z;  2QKD A;  2RIQ A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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