5C3EI

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 8
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c3eI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c3eI02
5IP7I 2NVYI 1USPB 4NB9A 3HOUI 5IP9I 1DL6A 3GTMI 3PO3S 3K7AI 3S2DI 2NVTI 3S16I 2E2JI 3FKII 4NBBA 4NB8A 1NUIA 3S1QI 1K83I 1USPA 1Y1VI 1Y1WI 4NBDA 2AKLA 1SFOI 2J6AA 1RO4A 2DE7A 4NBHA 4BBRI 2B63I 4BBSI 2JA5I 2NVXI 2JA8I 3M4OI 3GTQI 3CQZI 2NVQI 4A3JI 2P3YA 1ML8A 2BJOA 1YUAA 2HF1A 3PO2I 2R7ZI 3S2HI 1I50I 4NBCA 4A3GI 1TWCI 3GKQA 4A3II 4NOZA 4A3FI 3LUSA 4BY7I 3H0GI 3M3YI 3RZOI 3GTMS 3Q87A 4QTUA 5C44I 3D6WA 2JA6I 1TFIA 3S17I 3S1RI 1TWFI 1N2FA 1ZB8A 1Y1VS 3S1MI 1TWAI 4XX2A 4BXXI 4NBEA 2DE5A 3S1NI 1TWGI 3S15I 1WCMI 1ZB9A 4NBAA 3GTKI 3HOXI 5C3EI 2RBLA 1VLAA 5C4XI 2R93I 2E2II 1RLYA 3VMIA 4Y7NI 3GTJI 3GTPI 3S14I 2F4OA 4NBFA 2JA7I 5FLMI 3VMHA 3I4NI 4A3EI 2KPIA 1X3ZA 1QYPA 4A3KI 1PFTA 4BY1I 3GCFA 3HOYI 4X6AI 3I4MI 2VUMI 2DE6A 1R9TI 3VMGA 2JR6A 3I07A 5CM2M 2JS4A 3PO3I 2E2HI 4A3DI 1I3QI 4QTTA 3GTLI 1TWHI 4A3BI 1WW9A 1X3WA 2F4MA 3HOZI 4A93I 4NBGA 2K5RA 3U50C 3GTGI 1L1OC 3EERA 4A3MI 4MH4A 2YU9I 5C4JI 3HOWI 3H3VJ 3VB9A 4A3LI 2R92I 2JNYA 4A3CI 1I6HI 3ESWA 3GTOI 1LQLA 3HOVI 2PK7A 3RZDI 4Y52I
chains in the Genus database with same CATH superfamily
4NB9A 1Q821 2VF1A 2QRDB 3CXCY 3GTMI 3CCR1 3CD6Z 1QVGZ 2E2JI 3D2LA 3QWUA 4NB8A 2V3VA 3CCMZ 3CCV1 3S1QI 1VQ71 1K732 1RQFA 1SFOI 2DE7A 1S721 3CC4Z 2JA5I 4RVFA 4CL1A 1Y8CA 3GTQI 2NVQI 4A3JI 2JUBA 3MZLB 2G2KA 1YUAA 1VQKZ 2HF1A 2R7ZI 3S2HI 4RS4A 4NBCA 1Q16A 2V8IA 1KC82 2ZAEB 3H0GI 4BY7I 3M3YI 3RZOI 2GTIA 3GTMS 1KD11 4QTUA 2V8KA 5AN9F 1JJ2Z 3CMAZ 1WZNA 3G6E1 4MONA 1QXFA 1Z03A 5D1PA 3S17I 2VUGA 4XX2A 2IV2X 1VQOZ 5T6BA 5T67A 1M902 2JIOA 3TE5B 2DE5A 4NBAA 3GTKI 5C3EI 1VLAA 3VMIA 4Y7NI 3GTJI 3I55Z 1VQM1 2AYDA 1NP6A 3VMHA 3I561 3I4NI 2KPIA 3JAMb 1KQSZ 1X3ZA 2RPRA 1K731 5A2Qb 2E7ZA 2W03A 1PFTA 3GCFA 4RVGA 4E2XA 3HOYI 1QVFY 3CD61 2DE6A 5CM2M 4RV9A 3P5JB 3CCVZ 4E2WA 1Q822 1S72Z 4A3BI 3CC41 2OOYB 1RO0A 4E30A 2F4MA 3HOZI 4NBGA 3FQMA 1K9M2 2GU2A 1YJW1 1L1OC 4MH4A 2LIYA 1I6HI 3CMEZ 3CCSZ 5D1OB 1LQLA 3OW2Z 3HOVI 1M901 2JIQA 1VQ4Z 3NH8A 3RZDI 2RIQA 3G6EZ 2IZ4A 4Y52I 5IP7I 3CMA1 1USPB 1DL6A 3K7AI 3S2DI 3J80f 1VQO1 1VQN1 2Y0SA 4E2ZA 3T4NB 3CCU1 1NUIA 2M6NA 1K83I 1W2BY 1P9NA 1Y1WI 4NBDA 3KIHA 2J6AA 1FDIA 2B63I 1YIT1 2NVXI 2JA8I 1WIIA 2KI7B 4MXUA 3M4OI 4MD8A 2BJOA 1YIJZ 1I50I 3GKQA 2WB1A 4A3FI 1K9M1 1TFIA 4E2YA 1KQSY 1N2FA 1VQL1 2P28A 3S1MI 2RT9A 3CPWY 1X0TA 1YJWZ 5FLXf 3S15I 1K8A1 1WCMI 3HOXI 2R6MA 2R93I 3CME1 3CCS1 2JA7I 1Q812 1VQ41 3IFUA 4A3KI 1S7MA 1VQNZ 3I07A 3CCUZ 4A3DI 1I3QI 4QTTA 1YITZ 2LFUA 2Q4ZA 3U50C 3CC71 1VQ61 3NDIA 3NH4A 3CCJ1 3H3VJ 1VQP1 1YIJ1 2QRCB 3MZKB 2QKDA 4A3LI 2HU9A 2JNYA 2VPZA 3ESWA 1N8R2 2I3CA 2PMZA 3CXCZ 1YHQZ 2OTL1 1WJ2A 3J80b 1RO2A 2QREB 3CCEZ 1VQLZ 5LL6f 1YJ9Z 2NVTI 5T64A 3S16I 3J81f 3FKII 4NBBA 1QVGY 3NH5A 1Y1VI 4BBSI 2AKLA 1Q811 3IF8A 1RO4A 4NBHA 1VQ5Z 4BBRI 1FDOA 4RVHA 2Q51A 3NFZA 2QR1B 2VPYA 3NDJA 2W04A 1ML8A 2P3YA 1K8A2 2K3RA 4A3GI 3G4SZ 1TWCI 1RNIA 5IT9f 3CC21 4NFRA 4DK1A 2GTHA 4TNUA 3Q87A 3D6WA 2JA6I 3F3FC 2OZKA 1JJ2Y 3D9XA 5FLXb 1M1K2 3S1RI 3EEDA 1TWFI 1ZB8A 1Y1VS 1TWAI 4BXXI 2JMOA 4NBEA 2QA41 3CC7Z 1VQ6Z 3BG0B 3CCJZ 3S1NI 1TWGI 1N8R1 1VQPZ 2OOXB 2RBLA 2V8JA 2E2II 2F4OA 4NBFA 5FLMI 2OTLZ 2O53A 3CCL1 4A3EI 1YHQ1 1QYPA 4NH1C 4BY1I 1YJN1 4X6AI 4E31A 3CCE1 1R9TI 3VMGA 2QEX1 1YJ91 1NJI1 2JS4A 1VQ9Z 3PO3I 1TWHI 3HKZA 4MD9A 1VQ51 1X3WA 1SIWA 3G71Z 4A93I 2K5RA 1VQ81 3GTGI 3EERA 4A3MI 5C4JI 3HOWI 1Q7Y2 2EGTA 3VB9A 2OTJ1 1KRLA 3CC2Z 1M1K1 2QLVB 3G4S1 2JIPA 1AA6A 3CCQ1 4A3CI 2JIRA 2PK7A 2VPXA 2NVYI 3J81b 2JIMA 3TDHB 3OW2Y 5IP9I 3HOUI 3MONA 3IR7A 4E32A 2E9HA 3PO3S 2VPWA 1YUKA 5D1OA 1W2BZ 1ZH1A 2QA4Z 2RHBA 4S1TA 2WAQA 1USPA 3F3PC 2O4HA 4HGYA 3CQZI 1Q862 2IZ3A 5IT9b 4AYBA 2V45A 3CCLZ 3PO2I 1YI2Z 1Z02A 1YJNZ 4A3II 4NOZA 3LUSA 4HGZA 2QEXZ 3J7A4 4HH4A 5C44I 1VQ91 4E33A 3CPWZ 1Q7Y1 3CCRZ 3FQQA 1JWHC 2YADA 2M48A 3G711 1VQ8Z 1NJI2 1VQ7Z 3CCM1 2NAPA 3VTNA 1ZB9A 2LEXA 2OTJZ 5C4XI 3CCQZ 1KC81 1RLYA 3GTPI 4RVDA 3S14I 1QF8A 1VQK1 4MD7A 4EWCA 3I4MI 2VUMI 4MRIA 3IX0A 3JAMf 2JR6A 5A2Qf 1Q861 2PM9A 2E2HI 3GTLI 2H85A 1WW9A 1KD12 1Z01A 3KIFA 2YU9I 4DGLA 4DQYB 1QVFZ 1YI21 3BG1B 2R92I 1VQMZ 3GTOI 3I551 3I56Z
chains in the Genus database with same CATH topology
4NB9A 1Q821 2VF1A 2QRDB 3CXCY 3GTMI 3CCR1 3CD6Z 1QVGZ 2E2JI 3QWUA 4NB8A 3CCV1 3CCMZ 3S1QI 1VQ71 1K732 1RQFA 1SFOI 2DE7A 1S721 3CC4Z 2JA5I 4RVFA 4CL1A 3GTQI 2NVQI 4A3JI 2JUBA 3MZLB 2G2KA 1YUAA 1VQKZ 2HF1A 2R7ZI 3S2HI 4RS4A 4NBCA 2V8IA 1KC82 2ZAEB 3H0GI 4BY7I 3M3YI 3RZOI 2GTIA 3GTMS 1KD11 4QTUA 2V8KA 5AN9F 1JJ2Z 3CMAZ 3G6E1 4MONA 1Z03A 5D1PA 3S17I 2VUGA 4XX2A 1VQOZ 5T6BA 5T67A 1M902 3TE5B 2DE5A 4NBAA 3GTKI 5C3EI 1VLAA 3VMIA 4Y7NI 3GTJI 3I55Z 1VQM1 1NP6A 3VMHA 3I561 3I4NI 2KPIA 3JAMb 1KQSZ 1X3ZA 2RPRA 1K731 5A2Qb 2W03A 1PFTA 3GCFA 4RVGA 4E2XA 3HOYI 1QVFY 3CD61 2DE6A 5CM2M 4RV9A 3P5JB 3CCVZ 4E2WA 1Q822 1S72Z 4A3BI 3CC41 2OOYB 1RO0A 4E30A 2F4MA 3HOZI 4NBGA 3FQMA 1K9M2 2GU2A 1YJW1 1L1OC 4MH4A 2LIYA 1I6HI 3CMEZ 3CCSZ 5D1OB 1LQLA 3OW2Z 3HOVI 1M901 1VQ4Z 3NH8A 3RZDI 2RIQA 3G6EZ 2IZ4A 4Y52I 5IP7I 3CMA1 1USPB 1DL6A 3K7AI 3S2DI 3J80f 1VQO1 1VQN1 2Y0SA 4E2ZA 3T4NB 3CCU1 1NUIA 2M6NA 1K83I 1W2BY 1P9NA 1Y1WI 4NBDA 3KIHA 2J6AA 2B63I 1YIT1 2NVXI 2JA8I 1WIIA 2KI7B 4MXUA 3M4OI 4MD8A 2BJOA 1YIJZ 1I50I 3GKQA 2WB1A 4A3FI 1K9M1 1TFIA 4E2YA 1KQSY 1N2FA 1VQL1 2P28A 3S1MI 2RT9A 3CPWY 1X0TA 1YJWZ 5FLXf 3S15I 1K8A1 1WCMI 3HOXI 2R6MA 2R93I 3CME1 3CCS1 2JA7I 1Q812 1VQ41 3IFUA 4A3KI 1S7MA 1VQNZ 3I07A 3CCUZ 4A3DI 1I3QI 4QTTA 1YITZ 2LFUA 2Q4ZA 3U50C 3CC71 1VQ61 3NDIA 3NH4A 3CCJ1 3H3VJ 1VQP1 1YIJ1 2QRCB 3MZKB 2QKDA 4A3LI 2HU9A 2JNYA 3ESWA 1N8R2 2I3CA 2PMZA 3CXCZ 1YHQZ 2OTL1 3J80b 1RO2A 2QREB 3CCEZ 1VQLZ 5LL6f 1YJ9Z 2NVTI 5T64A 3S16I 3J81f 3FKII 4NBBA 1QVGY 3NH5A 1Y1VI 4BBSI 2AKLA 1Q811 3IF8A 1RO4A 4NBHA 1VQ5Z 4BBRI 4RVHA 2Q51A 3NFZA 2QR1B 3NDJA 2W04A 1ML8A 2P3YA 1K8A2 2K3RA 4A3GI 3G4SZ 1TWCI 1RNIA 5IT9f 3CC21 4NFRA 4DK1A 2GTHA 4TNUA 3Q87A 3D6WA 2JA6I 3F3FC 2OZKA 1JJ2Y 3D9XA 5FLXb 1M1K2 3S1RI 3EEDA 1TWFI 1ZB8A 1Y1VS 1TWAI 4BXXI 2JMOA 4NBEA 2QA41 3CC7Z 1VQ6Z 3BG0B 3CCJZ 3S1NI 1TWGI 1N8R1 1VQPZ 2OOXB 2RBLA 2V8JA 2E2II 2F4OA 4NBFA 5FLMI 2OTLZ 2O53A 3CCL1 4A3EI 1YHQ1 1QYPA 4NH1C 4BY1I 1YJN1 4X6AI 4E31A 3CCE1 1R9TI 3VMGA 2QEX1 1YJ91 1NJI1 2JS4A 1VQ9Z 3PO3I 1TWHI 3HKZA 4MD9A 1VQ51 1X3WA 3G71Z 4A93I 2K5RA 1VQ81 3GTGI 3EERA 4A3MI 5C4JI 3HOWI 1Q7Y2 2EGTA 3VB9A 2OTJ1 1KRLA 3CC2Z 1M1K1 2QLVB 3G4S1 3CCQ1 4A3CI 2PK7A 2NVYI 3J81b 3TDHB 3OW2Y 5IP9I 3HOUI 3MONA 4E32A 2E9HA 3PO3S 1YUKA 5D1OA 1W2BZ 1ZH1A 2QA4Z 2RHBA 4S1TA 2WAQA 1USPA 3F3PC 2O4HA 4HGYA 3CQZI 1Q862 2IZ3A 5IT9b 4AYBA 3CCLZ 3PO2I 1YI2Z 1Z02A 1YJNZ 4A3II 4NOZA 3LUSA 4HGZA 2QEXZ 3J7A4 4HH4A 5C44I 1VQ91 4E33A 3CPWZ 1Q7Y1 3CCRZ 3FQQA 1JWHC 2YADA 2M48A 3G711 1VQ8Z 1NJI2 1VQ7Z 3CCM1 3VTNA 1ZB9A 2OTJZ 5C4XI 3CCQZ 1KC81 1RLYA 3GTPI 4RVDA 3S14I 1QF8A 1VQK1 4MD7A 4EWCA 3I4MI 2VUMI 4MRIA 3IX0A 3JAMf 2JR6A 5A2Qf 1Q861 2PM9A 2E2HI 3GTLI 2H85A 1WW9A 1KD12 1Z01A 3KIFA 2YU9I 4DGLA 4DQYB 1QVFZ 1YI21 3BG1B 2R92I 1VQMZ 3GTOI 3I551 3I56Z
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IP7 I;  2NVY I;  1USP B;  4NB9 A;  3HOU I;  5IP9 I;  1DL6 A;  3GTM I;  3PO3 S;  3K7A I;  3S2D I;  2NVT I;  3S16 I;  2E2J I;  3FKI I;  4NBB A;  4NB8 A;  1NUI A;  3S1Q I;  1K83 I;  1USP A;  1Y1V I;  1Y1W I;  4NBD A;  2AKL A;  1SFO I;  2J6A A;  1RO4 A;  2DE7 A;  4NBH A;  4BBR I;  2B63 I;  4BBS I;  2JA5 I;  2NVX I;  2JA8 I;  3M4O I;  3GTQ I;  3CQZ I;  2NVQ I;  4A3J I;  2P3Y A;  1ML8 A;  2BJO A;  1YUA A;  2HF1 A;  3PO2 I;  2R7Z I;  3S2H I;  1I50 I;  4NBC A;  4A3G I;  1TWC I;  3GKQ A;  4A3I I;  4NOZ A;  4A3F I;  3LUS A;  4BY7 I;  3H0G I;  3M3Y I;  3RZO I;  3GTM S;  3Q87 A;  4QTU A;  5C44 I;  3D6W A;  2JA6 I;  1TFI A;  3S17 I;  3S1R I;  1TWF I;  1N2F A;  1ZB8 A;  1Y1V S;  3S1M I;  1TWA I;  4XX2 A;  4BXX I;  4NBE A;  2DE5 A;  3S1N I;  1TWG I;  3S15 I;  1WCM I;  1ZB9 A;  4NBA A;  3GTK I;  3HOX I;  5C3E I;  2RBL A;  1VLA A;  5C4X I;  2R93 I;  2E2I I;  1RLY A;  3VMI A;  4Y7N I;  3GTJ I;  3GTP I;  3S14 I;  2F4O A;  4NBF A;  2JA7 I;  5FLM I;  3VMH A;  3I4N I;  4A3E I;  2KPI A;  1X3Z A;  1QYP A;  4A3K I;  1PFT A;  4BY1 I;  3GCF A;  3HOY I;  4X6A I;  3I4M I;  2VUM I;  2DE6 A;  1R9T I;  3VMG A;  2JR6 A;  3I07 A;  5CM2 M;  2JS4 A;  3PO3 I;  2E2H I;  4A3D I;  1I3Q I;  4QTT A;  3GTL I;  1TWH I;  4A3B I;  1WW9 A;  1X3W A;  2F4M A;  3HOZ I;  4A93 I;  4NBG A;  2K5R A;  3U50 C;  3GTG I;  1L1O C;  3EER A;  4A3M I;  4MH4 A;  2YU9 I;  5C4J I;  3HOW I;  3H3V J;  3VB9 A;  4A3L I;  2R92 I;  2JNY A;  4A3C I;  1I6H I;  3ESW A;  3GTO I;  1LQL A;  3HOV I;  2PK7 A;  3RZD I;  4Y52 I; 
#chains in the Genus database with same CATH topology
 4NB9 A;  1Q82 1;  2VF1 A;  2QRD B;  3CXC Y;  3GTM I;  3CCR 1;  3CD6 Z;  1QVG Z;  2E2J I;  3D2L A;  3QWU A;  4NB8 A;  2V3V A;  3CCM Z;  3CCV 1;  3S1Q I;  1VQ7 1;  1K73 2;  1RQF A;  1SFO I;  2DE7 A;  1S72 1;  3CC4 Z;  2JA5 I;  4RVF A;  4CL1 A;  1Y8C A;  3GTQ I;  2NVQ I;  4A3J I;  2JUB A;  3MZL B;  2G2K A;  1YUA A;  1VQK Z;  2HF1 A;  2R7Z I;  3S2H I;  4RS4 A;  4NBC A;  1Q16 A;  2V8I A;  1KC8 2;  2ZAE B;  3H0G I;  4BY7 I;  3M3Y I;  3RZO I;  2GTI A;  3GTM S;  1KD1 1;  4QTU A;  2V8K A;  5AN9 F;  1JJ2 Z;  3CMA Z;  1WZN A;  3G6E 1;  4MON A;  1QXF A;  1Z03 A;  5D1P A;  3S17 I;  2VUG A;  4XX2 A;  2IV2 X;  1VQO Z;  5T6B A;  5T67 A;  1M90 2;  2JIO A;  3TE5 B;  2DE5 A;  4NBA A;  3GTK I;  5C3E I;  1VLA A;  3VMI A;  4Y7N I;  3GTJ I;  3I55 Z;  1VQM 1;  2AYD A;  1NP6 A;  3VMH A;  3I56 1;  3I4N I;  2KPI A;  3JAM b;  1KQS Z;  1X3Z A;  2RPR A;  1K73 1;  5A2Q b;  2E7Z A;  2W03 A;  1PFT A;  3GCF A;  4RVG A;  4E2X A;  3HOY I;  1QVF Y;  3CD6 1;  2DE6 A;  5CM2 M;  4RV9 A;  3P5J B;  3CCV Z;  4E2W A;  1Q82 2;  1S72 Z;  4A3B I;  3CC4 1;  2OOY B;  1RO0 A;  4E30 A;  2F4M A;  3HOZ I;  4NBG A;  3FQM A;  1K9M 2;  2GU2 A;  1YJW 1;  1L1O C;  4MH4 A;  2LIY A;  1I6H I;  3CME Z;  3CCS Z;  5D1O B;  1LQL A;  3OW2 Z;  3HOV I;  1M90 1;  2JIQ A;  1VQ4 Z;  3NH8 A;  3RZD I;  2RIQ A;  3G6E Z;  2IZ4 A;  4Y52 I;  5IP7 I;  3CMA 1;  1USP B;  1DL6 A;  3K7A I;  3S2D I;  3J80 f;  1VQO 1;  1VQN 1;  2Y0S A;  4E2Z A;  3T4N B;  3CCU 1;  1NUI A;  2M6N A;  1K83 I;  1W2B Y;  1P9N A;  1Y1W I;  4NBD A;  3KIH A;  2J6A A;  1FDI A;  2B63 I;  1YIT 1;  2NVX I;  2JA8 I;  1WII A;  2KI7 B;  4MXU A;  3M4O I;  4MD8 A;  2BJO A;  1YIJ Z;  1I50 I;  3GKQ A;  2WB1 A;  4A3F I;  1K9M 1;  1TFI A;  4E2Y A;  1KQS Y;  1N2F A;  1VQL 1;  2P28 A;  3S1M I;  2RT9 A;  3CPW Y;  1X0T A;  1YJW Z;  5FLX f;  3S15 I;  1K8A 1;  1WCM I;  3HOX I;  2R6M A;  2R93 I;  3CME 1;  3CCS 1;  2JA7 I;  1Q81 2;  1VQ4 1;  3IFU A;  4A3K I;  1S7M A;  1VQN Z;  3I07 A;  3CCU Z;  4A3D I;  1I3Q I;  4QTT A;  1YIT Z;  2LFU A;  2Q4Z A;  3U50 C;  3CC7 1;  1VQ6 1;  3NDI A;  3NH4 A;  3CCJ 1;  3H3V J;  1VQP 1;  1YIJ 1;  2QRC B;  3MZK B;  2QKD A;  4A3L I;  2HU9 A;  2JNY A;  2VPZ A;  3ESW A;  1N8R 2;  2I3C A;  2PMZ A;  3CXC Z;  1YHQ Z;  2OTL 1;  1WJ2 A;  3J80 b;  1RO2 A;  2QRE B;  3CCE Z;  1VQL Z;  5LL6 f;  1YJ9 Z;  2NVT I;  5T64 A;  3S16 I;  3J81 f;  3FKI I;  4NBB A;  1QVG Y;  3NH5 A;  1Y1V I;  4BBS I;  2AKL A;  1Q81 1;  3IF8 A;  1RO4 A;  4NBH A;  1VQ5 Z;  4BBR I;  1FDO A;  4RVH A;  2Q51 A;  3NFZ A;  2QR1 B;  2VPY A;  3NDJ A;  2W04 A;  1ML8 A;  2P3Y A;  1K8A 2;  2K3R A;  4A3G I;  3G4S Z;  1TWC I;  1RNI A;  5IT9 f;  3CC2 1;  4NFR A;  4DK1 A;  2GTH A;  4TNU A;  3Q87 A;  3D6W A;  2JA6 I;  3F3F C;  2OZK A;  1JJ2 Y;  3D9X A;  5FLX b;  1M1K 2;  3S1R I;  3EED A;  1TWF I;  1ZB8 A;  1Y1V S;  1TWA I;  4BXX I;  2JMO A;  4NBE A;  2QA4 1;  3CC7 Z;  1VQ6 Z;  3BG0 B;  3CCJ Z;  3S1N I;  1TWG I;  1N8R 1;  1VQP Z;  2OOX B;  2RBL A;  2V8J A;  2E2I I;  2F4O A;  4NBF A;  5FLM I;  2OTL Z;  2O53 A;  3CCL 1;  4A3E I;  1YHQ 1;  1QYP A;  4NH1 C;  4BY1 I;  1YJN 1;  4X6A I;  4E31 A;  3CCE 1;  1R9T I;  3VMG A;  2QEX 1;  1YJ9 1;  1NJI 1;  2JS4 A;  1VQ9 Z;  3PO3 I;  1TWH I;  3HKZ A;  4MD9 A;  1VQ5 1;  1X3W A;  1SIW A;  3G71 Z;  4A93 I;  2K5R A;  1VQ8 1;  3GTG I;  3EER A;  4A3M I;  5C4J I;  3HOW I;  1Q7Y 2;  2EGT A;  3VB9 A;  2OTJ 1;  1KRL A;  3CC2 Z;  1M1K 1;  2QLV B;  3G4S 1;  2JIP A;  1AA6 A;  3CCQ 1;  4A3C I;  2JIR A;  2PK7 A;  2VPX A;  2NVY I;  3J81 b;  2JIM A;  3TDH B;  3OW2 Y;  5IP9 I;  3HOU I;  3MON A;  3IR7 A;  4E32 A;  2E9H A;  3PO3 S;  2VPW A;  1YUK A;  5D1O A;  1W2B Z;  1ZH1 A;  2QA4 Z;  2RHB A;  4S1T A;  2WAQ A;  1USP A;  3F3P C;  2O4H A;  4HGY A;  3CQZ I;  1Q86 2;  2IZ3 A;  5IT9 b;  4AYB A;  2V45 A;  3CCL Z;  3PO2 I;  1YI2 Z;  1Z02 A;  1YJN Z;  4A3I I;  4NOZ A;  3LUS A;  4HGZ A;  2QEX Z;  3J7A 4;  4HH4 A;  5C44 I;  1VQ9 1;  4E33 A;  3CPW Z;  1Q7Y 1;  3CCR Z;  3FQQ A;  1JWH C;  2YAD A;  2M48 A;  3G71 1;  1VQ8 Z;  1NJI 2;  1VQ7 Z;  3CCM 1;  2NAP A;  3VTN A;  1ZB9 A;  2LEX A;  2OTJ Z;  5C4X I;  3CCQ Z;  1KC8 1;  1RLY A;  3GTP I;  4RVD A;  3S14 I;  1QF8 A;  1VQK 1;  4MD7 A;  4EWC A;  3I4M I;  2VUM I;  4MRI A;  3IX0 A;  3JAM f;  2JR6 A;  5A2Q f;  1Q86 1;  2PM9 A;  2E2H I;  3GTL I;  2H85 A;  1WW9 A;  1KD1 2;  1Z01 A;  3KIF A;  2YU9 I;  4DGL A;  4DQY B;  1QVF Z;  1YI2 1;  3BG1 B;  2R92 I;  1VQM Z;  3GTO I;  3I55 1;  3I56 Z; 
#chains in the Genus database with same CATH homology
 4NB9 A;  1Q82 1;  2VF1 A;  2QRD B;  3CXC Y;  3GTM I;  3CCR 1;  3CD6 Z;  1QVG Z;  2E2J I;  3QWU A;  4NB8 A;  3CCV 1;  3CCM Z;  3S1Q I;  1VQ7 1;  1K73 2;  1RQF A;  1SFO I;  2DE7 A;  1S72 1;  3CC4 Z;  2JA5 I;  4RVF A;  4CL1 A;  3GTQ I;  2NVQ I;  4A3J I;  2JUB A;  3MZL B;  2G2K A;  1YUA A;  1VQK Z;  2HF1 A;  2R7Z I;  3S2H I;  4RS4 A;  4NBC A;  2V8I A;  1KC8 2;  2ZAE B;  3H0G I;  4BY7 I;  3M3Y I;  3RZO I;  2GTI A;  3GTM S;  1KD1 1;  4QTU A;  2V8K A;  5AN9 F;  1JJ2 Z;  3CMA Z;  3G6E 1;  4MON A;  1Z03 A;  5D1P A;  3S17 I;  2VUG A;  4XX2 A;  1VQO Z;  5T6B A;  5T67 A;  1M90 2;  3TE5 B;  2DE5 A;  4NBA A;  3GTK I;  5C3E I;  1VLA A;  3VMI A;  4Y7N I;  3GTJ I;  3I55 Z;  1VQM 1;  1NP6 A;  3VMH A;  3I56 1;  3I4N I;  2KPI A;  3JAM b;  1KQS Z;  1X3Z A;  2RPR A;  1K73 1;  5A2Q b;  2W03 A;  1PFT A;  3GCF A;  4RVG A;  4E2X A;  3HOY I;  1QVF Y;  3CD6 1;  2DE6 A;  5CM2 M;  4RV9 A;  3P5J B;  3CCV Z;  4E2W A;  1Q82 2;  1S72 Z;  4A3B I;  3CC4 1;  2OOY B;  1RO0 A;  4E30 A;  2F4M A;  3HOZ I;  4NBG A;  3FQM A;  1K9M 2;  2GU2 A;  1YJW 1;  1L1O C;  4MH4 A;  2LIY A;  1I6H I;  3CME Z;  3CCS Z;  5D1O B;  1LQL A;  3OW2 Z;  3HOV I;  1M90 1;  1VQ4 Z;  3NH8 A;  3RZD I;  2RIQ A;  3G6E Z;  2IZ4 A;  4Y52 I;  5IP7 I;  3CMA 1;  1USP B;  1DL6 A;  3K7A I;  3S2D I;  3J80 f;  1VQO 1;  1VQN 1;  2Y0S A;  4E2Z A;  3T4N B;  3CCU 1;  1NUI A;  2M6N A;  1K83 I;  1W2B Y;  1P9N A;  1Y1W I;  4NBD A;  3KIH A;  2J6A A;  2B63 I;  1YIT 1;  2NVX I;  2JA8 I;  1WII A;  2KI7 B;  4MXU A;  3M4O I;  4MD8 A;  2BJO A;  1YIJ Z;  1I50 I;  3GKQ A;  2WB1 A;  4A3F I;  1K9M 1;  1TFI A;  4E2Y A;  1KQS Y;  1N2F A;  1VQL 1;  2P28 A;  3S1M I;  2RT9 A;  3CPW Y;  1X0T A;  1YJW Z;  5FLX f;  3S15 I;  1K8A 1;  1WCM I;  3HOX I;  2R6M A;  2R93 I;  3CME 1;  3CCS 1;  2JA7 I;  1Q81 2;  1VQ4 1;  3IFU A;  4A3K I;  1S7M A;  1VQN Z;  3I07 A;  3CCU Z;  4A3D I;  1I3Q I;  4QTT A;  1YIT Z;  2LFU A;  2Q4Z A;  3U50 C;  3CC7 1;  1VQ6 1;  3NDI A;  3NH4 A;  3CCJ 1;  3H3V J;  1VQP 1;  1YIJ 1;  2QRC B;  3MZK B;  2QKD A;  4A3L I;  2HU9 A;  2JNY A;  3ESW A;  1N8R 2;  2I3C A;  2PMZ A;  3CXC Z;  1YHQ Z;  2OTL 1;  3J80 b;  1RO2 A;  2QRE B;  3CCE Z;  1VQL Z;  5LL6 f;  1YJ9 Z;  2NVT I;  5T64 A;  3S16 I;  3J81 f;  3FKI I;  4NBB A;  1QVG Y;  3NH5 A;  1Y1V I;  4BBS I;  2AKL A;  1Q81 1;  3IF8 A;  1RO4 A;  4NBH A;  1VQ5 Z;  4BBR I;  4RVH A;  2Q51 A;  3NFZ A;  2QR1 B;  3NDJ A;  2W04 A;  1ML8 A;  2P3Y A;  1K8A 2;  2K3R A;  4A3G I;  3G4S Z;  1TWC I;  1RNI A;  5IT9 f;  3CC2 1;  4NFR A;  4DK1 A;  2GTH A;  4TNU A;  3Q87 A;  3D6W A;  2JA6 I;  3F3F C;  2OZK A;  1JJ2 Y;  3D9X A;  5FLX b;  1M1K 2;  3S1R I;  3EED A;  1TWF I;  1ZB8 A;  1Y1V S;  1TWA I;  4BXX I;  2JMO A;  4NBE A;  2QA4 1;  3CC7 Z;  1VQ6 Z;  3BG0 B;  3CCJ Z;  3S1N I;  1TWG I;  1N8R 1;  1VQP Z;  2OOX B;  2RBL A;  2V8J A;  2E2I I;  2F4O A;  4NBF A;  5FLM I;  2OTL Z;  2O53 A;  3CCL 1;  4A3E I;  1YHQ 1;  1QYP A;  4NH1 C;  4BY1 I;  1YJN 1;  4X6A I;  4E31 A;  3CCE 1;  1R9T I;  3VMG A;  2QEX 1;  1YJ9 1;  1NJI 1;  2JS4 A;  1VQ9 Z;  3PO3 I;  1TWH I;  3HKZ A;  4MD9 A;  1VQ5 1;  1X3W A;  3G71 Z;  4A93 I;  2K5R A;  1VQ8 1;  3GTG I;  3EER A;  4A3M I;  5C4J I;  3HOW I;  1Q7Y 2;  2EGT A;  3VB9 A;  2OTJ 1;  1KRL A;  3CC2 Z;  1M1K 1;  2QLV B;  3G4S 1;  3CCQ 1;  4A3C I;  2PK7 A;  2NVY I;  3J81 b;  3TDH B;  3OW2 Y;  5IP9 I;  3HOU I;  3MON A;  4E32 A;  2E9H A;  3PO3 S;  1YUK A;  5D1O A;  1W2B Z;  1ZH1 A;  2QA4 Z;  2RHB A;  4S1T A;  2WAQ A;  1USP A;  3F3P C;  2O4H A;  4HGY A;  3CQZ I;  1Q86 2;  2IZ3 A;  5IT9 b;  4AYB A;  3CCL Z;  3PO2 I;  1YI2 Z;  1Z02 A;  1YJN Z;  4A3I I;  4NOZ A;  3LUS A;  4HGZ A;  2QEX Z;  3J7A 4;  4HH4 A;  5C44 I;  1VQ9 1;  4E33 A;  3CPW Z;  1Q7Y 1;  3CCR Z;  3FQQ A;  1JWH C;  2YAD A;  2M48 A;  3G71 1;  1VQ8 Z;  1NJI 2;  1VQ7 Z;  3CCM 1;  3VTN A;  1ZB9 A;  2OTJ Z;  5C4X I;  3CCQ Z;  1KC8 1;  1RLY A;  3GTP I;  4RVD A;  3S14 I;  1QF8 A;  1VQK 1;  4MD7 A;  4EWC A;  3I4M I;  2VUM I;  4MRI A;  3IX0 A;  3JAM f;  2JR6 A;  5A2Q f;  1Q86 1;  2PM9 A;  2E2H I;  3GTL I;  2H85 A;  1WW9 A;  1KD1 2;  1Z01 A;  3KIF A;  2YU9 I;  4DGL A;  4DQY B;  1QVF Z;  1YI2 1;  3BG1 B;  2R92 I;  1VQM Z;  3GTO I;  3I55 1;  3I56 Z; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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