5C44I

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase/dna/rna
molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 9
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I02
1TWGI 3GTOI 1ZB8A 1Y1WI 4NBGA 3PO3S 3I4NI 4A3FI 4BY1I 1K83I 3S15I 4NB8A 4NB9A 3GTMI 2R93I 3S17I 3H0GI 4QTTA 3S1NI 1I50I 2JA7I 4NBHA 4NBAA 5IP9I 3S2HI 2NVQI 4A3II 1ZB9A 1X3WA 4BBSI 3I4MI 4A3KI 3M3YI 1NUIA 2JNYA 3GTPI 3HOXI 1L1OC 4A93I 1WCMI 3CQZI 5C3EI 3M4OI 5C44I 1QYPA 2DE6A 3S1RI 1RO4A 1TWFI 1Y1VS 2JS4A 1RLYA 2E2HI 3VMGA 4Y52I 1YUAA 3S1QI 1TWCI 4X6AI 2RBLA 3D6WA 4NBDA 1R9TI 4NBBA 1SFOI 2J6AA 4NOZA 3GTLI 1USPA 2E2JI 3RZDI 1LQLA 3EERA 4NBEA 4QTUA 3S16I 4BY7I 1X3ZA 2E2II 2R7ZI 2F4OA 2DE7A 3ESWA 2P3YA 2JA5I 1USPB 3K7AI 4XX2A 3GKQA 1WW9A 3GCFA 3HOYI 4A3GI 3Q87A 5FLMI 5C4XI 3VB9A 2DE5A 2NVTI 3FKII 3PO3I 2BJOA 4A3LI 4A3MI 1TWHI 4NBFA 3VMHA 2R92I 1I3QI 4BBRI 2NVXI 2PK7A 3H3VJ 3GTMS 4Y7NI 1DL6A 3HOZI 3RZOI 1N2FA 3S1MI 3GTKI 3GTJI 2F4MA 5IP7I 3S14I 4A3CI 4A3EI 1TFIA 1TWAI 2AKLA 4A3DI 1ML8A 3VMIA 3GTGI 2B63I 4MH4A 3U50C 5C4JI 3HOVI 2NVYI 3S2DI 1Y1VI 2JA8I 1PFTA 2HF1A 5CM2M 2JA6I 2K5RA 3I07A 2VUMI 2JR6A 4BXXI 3GTQI 3HOUI 4A3JI 2KPIA 3PO2I 3LUSA 4A3BI 3HOWI 1I6HI 1VLAA 4NBCA 2YU9I
chains in the Genus database with same CATH superfamily
4EWCA 4NBGA 2GU2A 3CXCY 3CPWZ 1Q821 2EGTA 2AYDA 3TDHB 2R93I 2YADA 2PM9A 1W2BZ 2OOYB 2OZKA 1YJNZ 2JA7I 4NBHA 3OW2Y 2VPXA 2M48A 2V8IA 3QWUA 4A3KI 3M3YI 3G71Z 2GTHA 1NP6A 1VQO1 2V45A 4RV9A 1VQ91 1Y1VS 2JS4A 1YJWZ 3CXCZ 2V8JA 3CD6Z 3CC41 3D6WA 4NBDA 2JIRA 1VQ81 2E2JI 5D1PA 2E7ZA 1YJ91 1S721 1QVGY 3OW2Z 2HU9A 4MD8A 1YHQZ 2R7ZI 2E2II 2DE7A 1RNIA 3I551 3GKQA 3CCR1 3HOYI 3CCV1 1VQ51 4A3GI 2O53A 1VQN1 3FKII 4RVDA 5T64A 2JMOA 2IZ3A 4NFRA 4CL1A 4E32A 1YITZ 1VQ7Z 2OTJ1 1WIIA 3G6EZ 1VQL1 2NAPA 3GTMS 2QR1B 1RO0A 3S1MI 2OTL1 2ZAEB 3GTKI 1SIWA 2JIOA 2PMZA 1KD12 1QVGZ 3CCSZ 1M1K2 2Q51A 1TFIA 3HKZA 3VMIA 3GTGI 2RT9A 3D9XA 1WJ2A 2JIPA 4MH4A 3I561 1RO2A 4A3JI 2GTIA 3J80b 4NBCA 2YU9I 3GTOI 3MZLB 2LFUA 3PO3S 3NH8A 4A3FI 1K83I 4NH1C 4E33A 3IFUA 1AA6A 3H0GI 1VQ9Z 4NBAA 1X3WA 1M901 4MD7A 2QKDA 1QVFY 2W03A 4E2YA 4RVFA 3CC4Z 1VQ8Z 3GTPI 1Q861 1N8R2 1WCMI 5C3EI 2VPWA 3J7A4 1YJ9Z 3S1RI 1TWFI 3IF8A 1FDOA 2RHBA 1YUAA 3S1QI 3IR7A 1TWCI 3I55Z 1K732 2K3RA 2RBLA 2V3VA 2LIYA 1WZNA 4NBBA 3CCRZ 3CCVZ 1LQLA 1VQNZ 1N8R1 3EERA 4NBEA 4QTUA 1YI21 1Z01A 1VQK1 2VPZA 2W04A 1P9NA 2F4OA 3ESWA 2OTJZ 1Q16A 1QVFZ 2QA41 2QREB 1Z03A 5IT9b 3J81b 2BJOA 3CCE1 2R6MA 4NBFA 2RPRA 5A2Qb 3KIHA 1YIJ1 3F3FC 1I3QI 4BBRI 2V8KA 2NVXI 3CCQZ 4Y7NI 3G4S1 3CCUZ 3NH5A 3HOZI 1N2FA 3CCM1 2G2KA 2H85A 2F4MA 5IP7I 2JUBA 3CC21 4A3CI 3NH4A 1TWAI 2AKLA 4A3DI 3TE5B 1JWHC 2O4HA 1PFTA 2HF1A 5CM2M 2JA6I 3CMA1 4BXXI 2RIQA 2Q4ZA 5D1OB 3LUSA 3F3PC 1ZH1A 5T67A 1I6HI 3CC71 1TWGI 1Y1WI 3I4NI 5LL6f 2M6NA 4BY1I 4NB8A 2WAQA 4NB9A 4E31A 3GTMI 2QEX1 2E9HA 1K8A2 4E30A 3G711 4RS4A 3S2HI 3CME1 2NVQI 4A3II 4MXUA 2LEXA 2VPYA 4HGZA 2VUGA 3I4MI 3J80f 1VQP1 2JNYA 1KC82 1L1OC 3CQZI 3T4NB 1KD11 1M1K1 2I3CA 5C44I 2DE6A 1YI2Z 1S7MA 2QRCB 1K8A1 1RLYA 2JIQA 3VMGA 2QRDB 1NJI2 4X6AI 1VQOZ 2QA4Z 3BG1B 1SFOI 3GTLI 4DGLA 1YUKA 1QF8A 3RZDI 1Q812 2KI7B 3MZKB 3CCJ1 3S16I 3CCEZ 3CCL1 4BY7I 1X3ZA 3FQMA 1Y8CA 1YIJZ 2JA5I 4AYBA 1VQ61 1USPB 1S72Z 5FLXb 1Q822 3KIFA 3Q87A 3VTNA 3VB9A 3CCMZ 2DE5A 3FQQA 1Q811 2NVTI 1RQFA 4HH4A 4A3LI 3CC2Z 1KQSY 1TWHI 3IX0A 1VQ5Z 2R92I 3JAMb 3NFZA 1K9M2 1QXFA 3H3VJ 4HGYA 4E2ZA 3CMAZ 5AN9F 3GTJI 1VQLZ 3S14I 1X0TA 3CC7Z 2IV2X 5D1OA 4A3EI 1K731 1ML8A 5IT9f 3J81f 4E2WA 2B63I 2OTLZ 3U50C 5C4JI 2NVYI 3S2DI 1K9M1 3MONA 4MD9A 1Q7Y2 1Y1VI 5A2Qf 2JA8I 1Z02A 1VQ41 2QEXZ 2K5RA 3I07A 3HOUI 3PO2I 1DL6A 4A3BI 3CMEZ 3P5JB 1VLAA 4MONA 1KQSZ 3I56Z 2WB1A 1ZB8A 1VQM1 3S15I 4RVHA 1VQPZ 4E2XA 1Q7Y1 3S17I 4QTTA 3S1NI 1I50I 1JJ2Y 3D2LA 2P28A 5IP9I 1ZB9A 3EEDA 4BBSI 4DQYB 1NUIA 3NDIA 3HOXI 4A93I 3M4OI 4MRIA 1QYPA 1YJN1 1RO4A 3CCJZ 2E2HI 3CCLZ 4Y52I 1VQ6Z 4RVGA 1R9TI 2J6AA 4NOZA 1USPA 2Y0SA 2IZ4A 1JJ2Z 1YJW1 2JIMA 2QLVB 2P3YA 3K7AI 3CD61 4XX2A 1WW9A 1VQKZ 3GCFA 4TNUA 5FLMI 5C4XI 5T6BA 3CCQ1 3PO3I 3CCU1 1KRLA 3VMHA 3NDJA 1YHQ1 4S1TA 3CPWY 1KC81 4DK1A 2PK7A 1M902 2VF1A 1W2BY 1VQ4Z 3RZOI 3BG0B 1Q862 5FLXf 1NJI1 3G4SZ 1VQMZ 1YIT1 1VQ71 3G6E1 3HOVI 1FDIA 2VUMI 2OOXB 2JR6A 3JAMf 3GTQI 2KPIA 4A3MI 3HOWI 3CCS1
chains in the Genus database with same CATH topology
4EWCA 4NBGA 2GU2A 3CXCY 3CPWZ 1Q821 2EGTA 3TDHB 2R93I 2YADA 2PM9A 1W2BZ 2OOYB 2OZKA 1YJNZ 2JA7I 4NBHA 3OW2Y 2M48A 2V8IA 3QWUA 4A3KI 3M3YI 3G71Z 2GTHA 1NP6A 1VQO1 4RV9A 1VQ91 1Y1VS 2JS4A 1YJWZ 3CXCZ 2V8JA 3CD6Z 3CC41 3D6WA 4NBDA 1VQ81 2E2JI 5D1PA 1YJ91 1S721 1QVGY 3OW2Z 2HU9A 4MD8A 1YHQZ 2R7ZI 2E2II 2DE7A 1RNIA 3I551 3GKQA 3CCR1 3HOYI 3CCV1 1VQ51 4A3GI 2O53A 1VQN1 3FKII 4RVDA 5T64A 2JMOA 2IZ3A 4NFRA 4CL1A 4E32A 1YITZ 1VQ7Z 2OTJ1 1WIIA 3G6EZ 1VQL1 3GTMS 2QR1B 1RO0A 3S1MI 2OTL1 2ZAEB 3GTKI 2PMZA 1KD12 1QVGZ 3CCSZ 1M1K2 2Q51A 1TFIA 3HKZA 3VMIA 3GTGI 2RT9A 3D9XA 4MH4A 3I561 1RO2A 4A3JI 2GTIA 3J80b 4NBCA 2YU9I 3GTOI 3MZLB 2LFUA 3PO3S 3NH8A 4A3FI 1K83I 4NH1C 4E33A 3IFUA 3H0GI 1VQ9Z 4NBAA 1X3WA 1M901 4MD7A 2QKDA 1QVFY 2W03A 4E2YA 4RVFA 3CC4Z 1VQ8Z 3GTPI 1Q861 1N8R2 1WCMI 5C3EI 3J7A4 1YJ9Z 3S1RI 1TWFI 3IF8A 2RHBA 1YUAA 3S1QI 3I55Z 1TWCI 1K732 2K3RA 2RBLA 2LIYA 4NBBA 3CCRZ 3CCVZ 1LQLA 1VQNZ 1N8R1 3EERA 4NBEA 4QTUA 1YI21 1Z01A 1VQK1 2W04A 1P9NA 2F4OA 3ESWA 2OTJZ 1QVFZ 2QA41 2QREB 1Z03A 5IT9b 3J81b 2BJOA 3CCE1 2R6MA 4NBFA 2RPRA 5A2Qb 3KIHA 1YIJ1 3F3FC 1I3QI 4BBRI 2V8KA 2NVXI 3CCQZ 4Y7NI 3G4S1 3CCUZ 3NH5A 3HOZI 1N2FA 3CCM1 2G2KA 2H85A 2F4MA 5IP7I 2JUBA 3CC21 4A3CI 3NH4A 1TWAI 2AKLA 4A3DI 3TE5B 1JWHC 2O4HA 1PFTA 2HF1A 5CM2M 2JA6I 3CMA1 4BXXI 2RIQA 2Q4ZA 5D1OB 3LUSA 3F3PC 1ZH1A 5T67A 1I6HI 3CC71 1TWGI 1Y1WI 3I4NI 5LL6f 2M6NA 4BY1I 4NB8A 2WAQA 4NB9A 4E31A 3GTMI 2QEX1 2E9HA 1K8A2 4E30A 3G711 4RS4A 3S2HI 3CME1 2NVQI 4A3II 4MXUA 4HGZA 2VUGA 3I4MI 3J80f 1VQP1 2JNYA 1KC82 1L1OC 3CQZI 3T4NB 1KD11 1M1K1 2I3CA 5C44I 2DE6A 1YI2Z 1S7MA 2QRCB 1K8A1 1RLYA 3VMGA 2QRDB 1NJI2 4X6AI 1VQOZ 2QA4Z 3BG1B 1SFOI 3GTLI 4DGLA 1YUKA 1QF8A 3RZDI 1Q812 2KI7B 3MZKB 3CCJ1 3S16I 3CCEZ 3CCL1 4BY7I 1X3ZA 3FQMA 1YIJZ 2JA5I 4AYBA 1VQ61 1USPB 1S72Z 5FLXb 1Q822 3KIFA 3Q87A 3VTNA 3VB9A 3CCMZ 2DE5A 3FQQA 1Q811 2NVTI 1RQFA 4HH4A 4A3LI 3CC2Z 1KQSY 1TWHI 3IX0A 1VQ5Z 2R92I 3JAMb 3NFZA 1K9M2 3H3VJ 4HGYA 4E2ZA 3CMAZ 5AN9F 3GTJI 1VQLZ 3S14I 1X0TA 3CC7Z 5D1OA 4A3EI 1K731 1ML8A 5IT9f 3J81f 4E2WA 2B63I 2OTLZ 3U50C 5C4JI 2NVYI 3S2DI 1K9M1 3MONA 4MD9A 1Q7Y2 1Y1VI 5A2Qf 2JA8I 1Z02A 1VQ41 2QEXZ 2K5RA 3I07A 3HOUI 3PO2I 1DL6A 4A3BI 3CMEZ 3P5JB 1VLAA 4MONA 1KQSZ 3I56Z 2WB1A 1ZB8A 1VQM1 3S15I 4RVHA 1VQPZ 4E2XA 1Q7Y1 3S17I 4QTTA 3S1NI 1I50I 1JJ2Y 2P28A 5IP9I 1ZB9A 3EEDA 4BBSI 4DQYB 1NUIA 3NDIA 3HOXI 4A93I 3M4OI 4MRIA 1QYPA 1YJN1 1RO4A 3CCJZ 2E2HI 3CCLZ 4Y52I 1VQ6Z 4RVGA 1R9TI 2J6AA 4NOZA 1USPA 2Y0SA 2IZ4A 1JJ2Z 1YJW1 2QLVB 2P3YA 3K7AI 3CD61 4XX2A 1WW9A 1VQKZ 3GCFA 4TNUA 5FLMI 5C4XI 5T6BA 3CCQ1 3PO3I 3CCU1 1KRLA 3VMHA 3NDJA 1YHQ1 4S1TA 3CPWY 1KC81 4DK1A 2PK7A 1M902 2VF1A 1W2BY 1VQ4Z 3RZOI 3BG0B 1Q862 5FLXf 1NJI1 3G4SZ 1VQMZ 1YIT1 1VQ71 3G6E1 3HOVI 2VUMI 2OOXB 2JR6A 3JAMf 3GTQI 2KPIA 4A3MI 3HOWI 3CCS1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWG I;  3GTO I;  1ZB8 A;  1Y1W I;  4NBG A;  3PO3 S;  3I4N I;  4A3F I;  4BY1 I;  1K83 I;  3S15 I;  4NB8 A;  4NB9 A;  3GTM I;  2R93 I;  3S17 I;  3H0G I;  4QTT A;  3S1N I;  1I50 I;  2JA7 I;  4NBH A;  4NBA A;  5IP9 I;  3S2H I;  2NVQ I;  4A3I I;  1ZB9 A;  1X3W A;  4BBS I;  3I4M I;  4A3K I;  3M3Y I;  1NUI A;  2JNY A;  3GTP I;  3HOX I;  1L1O C;  4A93 I;  1WCM I;  3CQZ I;  5C3E I;  3M4O I;  5C44 I;  1QYP A;  2DE6 A;  3S1R I;  1RO4 A;  1TWF I;  1Y1V S;  2JS4 A;  1RLY A;  2E2H I;  3VMG A;  4Y52 I;  1YUA A;  3S1Q I;  1TWC I;  4X6A I;  2RBL A;  3D6W A;  4NBD A;  1R9T I;  4NBB A;  1SFO I;  2J6A A;  4NOZ A;  3GTL I;  1USP A;  2E2J I;  3RZD I;  1LQL A;  3EER A;  4NBE A;  4QTU A;  3S16 I;  4BY7 I;  1X3Z A;  2E2I I;  2R7Z I;  2F4O A;  2DE7 A;  3ESW A;  2P3Y A;  2JA5 I;  1USP B;  3K7A I;  4XX2 A;  3GKQ A;  1WW9 A;  3GCF A;  3HOY I;  4A3G I;  3Q87 A;  5FLM I;  5C4X I;  3VB9 A;  2DE5 A;  2NVT I;  3FKI I;  3PO3 I;  2BJO A;  4A3L I;  4A3M I;  1TWH I;  4NBF A;  3VMH A;  2R92 I;  1I3Q I;  4BBR I;  2NVX I;  2PK7 A;  3H3V J;  3GTM S;  4Y7N I;  1DL6 A;  3HOZ I;  3RZO I;  1N2F A;  3S1M I;  3GTK I;  3GTJ I;  2F4M A;  5IP7 I;  3S14 I;  4A3C I;  4A3E I;  1TFI A;  1TWA I;  2AKL A;  4A3D I;  1ML8 A;  3VMI A;  3GTG I;  2B63 I;  4MH4 A;  3U50 C;  5C4J I;  3HOV I;  2NVY I;  3S2D I;  1Y1V I;  2JA8 I;  1PFT A;  2HF1 A;  5CM2 M;  2JA6 I;  2K5R A;  3I07 A;  2VUM I;  2JR6 A;  4BXX I;  3GTQ I;  3HOU I;  4A3J I;  2KPI A;  3PO2 I;  3LUS A;  4A3B I;  3HOW I;  1I6H I;  1VLA A;  4NBC A;  2YU9 I; 
#chains in the Genus database with same CATH topology
 4EWC A;  4NBG A;  2GU2 A;  3CXC Y;  3CPW Z;  1Q82 1;  2EGT A;  2AYD A;  3TDH B;  2R93 I;  2YAD A;  2PM9 A;  1W2B Z;  2OOY B;  2OZK A;  1YJN Z;  2JA7 I;  4NBH A;  3OW2 Y;  2VPX A;  2M48 A;  2V8I A;  3QWU A;  4A3K I;  3M3Y I;  3G71 Z;  2GTH A;  1NP6 A;  1VQO 1;  2V45 A;  4RV9 A;  1VQ9 1;  1Y1V S;  2JS4 A;  1YJW Z;  3CXC Z;  2V8J A;  3CD6 Z;  3CC4 1;  3D6W A;  4NBD A;  2JIR A;  1VQ8 1;  2E2J I;  5D1P A;  2E7Z A;  1YJ9 1;  1S72 1;  1QVG Y;  3OW2 Z;  2HU9 A;  4MD8 A;  1YHQ Z;  2R7Z I;  2E2I I;  2DE7 A;  1RNI A;  3I55 1;  3GKQ A;  3CCR 1;  3HOY I;  3CCV 1;  1VQ5 1;  4A3G I;  2O53 A;  1VQN 1;  3FKI I;  4RVD A;  5T64 A;  2JMO A;  2IZ3 A;  4NFR A;  4CL1 A;  4E32 A;  1YIT Z;  1VQ7 Z;  2OTJ 1;  1WII A;  3G6E Z;  1VQL 1;  2NAP A;  3GTM S;  2QR1 B;  1RO0 A;  3S1M I;  2OTL 1;  2ZAE B;  3GTK I;  1SIW A;  2JIO A;  2PMZ A;  1KD1 2;  1QVG Z;  3CCS Z;  1M1K 2;  2Q51 A;  1TFI A;  3HKZ A;  3VMI A;  3GTG I;  2RT9 A;  3D9X A;  1WJ2 A;  2JIP A;  4MH4 A;  3I56 1;  1RO2 A;  4A3J I;  2GTI A;  3J80 b;  4NBC A;  2YU9 I;  3GTO I;  3MZL B;  2LFU A;  3PO3 S;  3NH8 A;  4A3F I;  1K83 I;  4NH1 C;  4E33 A;  3IFU A;  1AA6 A;  3H0G I;  1VQ9 Z;  4NBA A;  1X3W A;  1M90 1;  4MD7 A;  2QKD A;  1QVF Y;  2W03 A;  4E2Y A;  4RVF A;  3CC4 Z;  1VQ8 Z;  3GTP I;  1Q86 1;  1N8R 2;  1WCM I;  5C3E I;  2VPW A;  3J7A 4;  1YJ9 Z;  3S1R I;  1TWF I;  3IF8 A;  1FDO A;  2RHB A;  1YUA A;  3S1Q I;  3IR7 A;  1TWC I;  3I55 Z;  1K73 2;  2K3R A;  2RBL A;  2V3V A;  2LIY A;  1WZN A;  4NBB A;  3CCR Z;  3CCV Z;  1LQL A;  1VQN Z;  1N8R 1;  3EER A;  4NBE A;  4QTU A;  1YI2 1;  1Z01 A;  1VQK 1;  2VPZ A;  2W04 A;  1P9N A;  2F4O A;  3ESW A;  2OTJ Z;  1Q16 A;  1QVF Z;  2QA4 1;  2QRE B;  1Z03 A;  5IT9 b;  3J81 b;  2BJO A;  3CCE 1;  2R6M A;  4NBF A;  2RPR A;  5A2Q b;  3KIH A;  1YIJ 1;  3F3F C;  1I3Q I;  4BBR I;  2V8K A;  2NVX I;  3CCQ Z;  4Y7N I;  3G4S 1;  3CCU Z;  3NH5 A;  3HOZ I;  1N2F A;  3CCM 1;  2G2K A;  2H85 A;  2F4M A;  5IP7 I;  2JUB A;  3CC2 1;  4A3C I;  3NH4 A;  1TWA I;  2AKL A;  4A3D I;  3TE5 B;  1JWH C;  2O4H A;  1PFT A;  2HF1 A;  5CM2 M;  2JA6 I;  3CMA 1;  4BXX I;  2RIQ A;  2Q4Z A;  5D1O B;  3LUS A;  3F3P C;  1ZH1 A;  5T67 A;  1I6H I;  3CC7 1;  1TWG I;  1Y1W I;  3I4N I;  5LL6 f;  2M6N A;  4BY1 I;  4NB8 A;  2WAQ A;  4NB9 A;  4E31 A;  3GTM I;  2QEX 1;  2E9H A;  1K8A 2;  4E30 A;  3G71 1;  4RS4 A;  3S2H I;  3CME 1;  2NVQ I;  4A3I I;  4MXU A;  2LEX A;  2VPY A;  4HGZ A;  2VUG A;  3I4M I;  3J80 f;  1VQP 1;  2JNY A;  1KC8 2;  1L1O C;  3CQZ I;  3T4N B;  1KD1 1;  1M1K 1;  2I3C A;  5C44 I;  2DE6 A;  1YI2 Z;  1S7M A;  2QRC B;  1K8A 1;  1RLY A;  2JIQ A;  3VMG A;  2QRD B;  1NJI 2;  4X6A I;  1VQO Z;  2QA4 Z;  3BG1 B;  1SFO I;  3GTL I;  4DGL A;  1YUK A;  1QF8 A;  3RZD I;  1Q81 2;  2KI7 B;  3MZK B;  3CCJ 1;  3S16 I;  3CCE Z;  3CCL 1;  4BY7 I;  1X3Z A;  3FQM A;  1Y8C A;  1YIJ Z;  2JA5 I;  4AYB A;  1VQ6 1;  1USP B;  1S72 Z;  5FLX b;  1Q82 2;  3KIF A;  3Q87 A;  3VTN A;  3VB9 A;  3CCM Z;  2DE5 A;  3FQQ A;  1Q81 1;  2NVT I;  1RQF A;  4HH4 A;  4A3L I;  3CC2 Z;  1KQS Y;  1TWH I;  3IX0 A;  1VQ5 Z;  2R92 I;  3JAM b;  3NFZ A;  1K9M 2;  1QXF A;  3H3V J;  4HGY A;  4E2Z A;  3CMA Z;  5AN9 F;  3GTJ I;  1VQL Z;  3S14 I;  1X0T A;  3CC7 Z;  2IV2 X;  5D1O A;  4A3E I;  1K73 1;  1ML8 A;  5IT9 f;  3J81 f;  4E2W A;  2B63 I;  2OTL Z;  3U50 C;  5C4J I;  2NVY I;  3S2D I;  1K9M 1;  3MON A;  4MD9 A;  1Q7Y 2;  1Y1V I;  5A2Q f;  2JA8 I;  1Z02 A;  1VQ4 1;  2QEX Z;  2K5R A;  3I07 A;  3HOU I;  3PO2 I;  1DL6 A;  4A3B I;  3CME Z;  3P5J B;  1VLA A;  4MON A;  1KQS Z;  3I56 Z;  2WB1 A;  1ZB8 A;  1VQM 1;  3S15 I;  4RVH A;  1VQP Z;  4E2X A;  1Q7Y 1;  3S17 I;  4QTT A;  3S1N I;  1I50 I;  1JJ2 Y;  3D2L A;  2P28 A;  5IP9 I;  1ZB9 A;  3EED A;  4BBS I;  4DQY B;  1NUI A;  3NDI A;  3HOX I;  4A93 I;  3M4O I;  4MRI A;  1QYP A;  1YJN 1;  1RO4 A;  3CCJ Z;  2E2H I;  3CCL Z;  4Y52 I;  1VQ6 Z;  4RVG A;  1R9T I;  2J6A A;  4NOZ A;  1USP A;  2Y0S A;  2IZ4 A;  1JJ2 Z;  1YJW 1;  2JIM A;  2QLV B;  2P3Y A;  3K7A I;  3CD6 1;  4XX2 A;  1WW9 A;  1VQK Z;  3GCF A;  4TNU A;  5FLM I;  5C4X I;  5T6B A;  3CCQ 1;  3PO3 I;  3CCU 1;  1KRL A;  3VMH A;  3NDJ A;  1YHQ 1;  4S1T A;  3CPW Y;  1KC8 1;  4DK1 A;  2PK7 A;  1M90 2;  2VF1 A;  1W2B Y;  1VQ4 Z;  3RZO I;  3BG0 B;  1Q86 2;  5FLX f;  1NJI 1;  3G4S Z;  1VQM Z;  1YIT 1;  1VQ7 1;  3G6E 1;  3HOV I;  1FDI A;  2VUM I;  2OOX B;  2JR6 A;  3JAM f;  3GTQ I;  2KPI A;  4A3M I;  3HOW I;  3CCS 1; 
#chains in the Genus database with same CATH homology
 4EWC A;  4NBG A;  2GU2 A;  3CXC Y;  3CPW Z;  1Q82 1;  2EGT A;  3TDH B;  2R93 I;  2YAD A;  2PM9 A;  1W2B Z;  2OOY B;  2OZK A;  1YJN Z;  2JA7 I;  4NBH A;  3OW2 Y;  2M48 A;  2V8I A;  3QWU A;  4A3K I;  3M3Y I;  3G71 Z;  2GTH A;  1NP6 A;  1VQO 1;  4RV9 A;  1VQ9 1;  1Y1V S;  2JS4 A;  1YJW Z;  3CXC Z;  2V8J A;  3CD6 Z;  3CC4 1;  3D6W A;  4NBD A;  1VQ8 1;  2E2J I;  5D1P A;  1YJ9 1;  1S72 1;  1QVG Y;  3OW2 Z;  2HU9 A;  4MD8 A;  1YHQ Z;  2R7Z I;  2E2I I;  2DE7 A;  1RNI A;  3I55 1;  3GKQ A;  3CCR 1;  3HOY I;  3CCV 1;  1VQ5 1;  4A3G I;  2O53 A;  1VQN 1;  3FKI I;  4RVD A;  5T64 A;  2JMO A;  2IZ3 A;  4NFR A;  4CL1 A;  4E32 A;  1YIT Z;  1VQ7 Z;  2OTJ 1;  1WII A;  3G6E Z;  1VQL 1;  3GTM S;  2QR1 B;  1RO0 A;  3S1M I;  2OTL 1;  2ZAE B;  3GTK I;  2PMZ A;  1KD1 2;  1QVG Z;  3CCS Z;  1M1K 2;  2Q51 A;  1TFI A;  3HKZ A;  3VMI A;  3GTG I;  2RT9 A;  3D9X A;  4MH4 A;  3I56 1;  1RO2 A;  4A3J I;  2GTI A;  3J80 b;  4NBC A;  2YU9 I;  3GTO I;  3MZL B;  2LFU A;  3PO3 S;  3NH8 A;  4A3F I;  1K83 I;  4NH1 C;  4E33 A;  3IFU A;  3H0G I;  1VQ9 Z;  4NBA A;  1X3W A;  1M90 1;  4MD7 A;  2QKD A;  1QVF Y;  2W03 A;  4E2Y A;  4RVF A;  3CC4 Z;  1VQ8 Z;  3GTP I;  1Q86 1;  1N8R 2;  1WCM I;  5C3E I;  3J7A 4;  1YJ9 Z;  3S1R I;  1TWF I;  3IF8 A;  2RHB A;  1YUA A;  3S1Q I;  3I55 Z;  1TWC I;  1K73 2;  2K3R A;  2RBL A;  2LIY A;  4NBB A;  3CCR Z;  3CCV Z;  1LQL A;  1VQN Z;  1N8R 1;  3EER A;  4NBE A;  4QTU A;  1YI2 1;  1Z01 A;  1VQK 1;  2W04 A;  1P9N A;  2F4O A;  3ESW A;  2OTJ Z;  1QVF Z;  2QA4 1;  2QRE B;  1Z03 A;  5IT9 b;  3J81 b;  2BJO A;  3CCE 1;  2R6M A;  4NBF A;  2RPR A;  5A2Q b;  3KIH A;  1YIJ 1;  3F3F C;  1I3Q I;  4BBR I;  2V8K A;  2NVX I;  3CCQ Z;  4Y7N I;  3G4S 1;  3CCU Z;  3NH5 A;  3HOZ I;  1N2F A;  3CCM 1;  2G2K A;  2H85 A;  2F4M A;  5IP7 I;  2JUB A;  3CC2 1;  4A3C I;  3NH4 A;  1TWA I;  2AKL A;  4A3D I;  3TE5 B;  1JWH C;  2O4H A;  1PFT A;  2HF1 A;  5CM2 M;  2JA6 I;  3CMA 1;  4BXX I;  2RIQ A;  2Q4Z A;  5D1O B;  3LUS A;  3F3P C;  1ZH1 A;  5T67 A;  1I6H I;  3CC7 1;  1TWG I;  1Y1W I;  3I4N I;  5LL6 f;  2M6N A;  4BY1 I;  4NB8 A;  2WAQ A;  4NB9 A;  4E31 A;  3GTM I;  2QEX 1;  2E9H A;  1K8A 2;  4E30 A;  3G71 1;  4RS4 A;  3S2H I;  3CME 1;  2NVQ I;  4A3I I;  4MXU A;  4HGZ A;  2VUG A;  3I4M I;  3J80 f;  1VQP 1;  2JNY A;  1KC8 2;  1L1O C;  3CQZ I;  3T4N B;  1KD1 1;  1M1K 1;  2I3C A;  5C44 I;  2DE6 A;  1YI2 Z;  1S7M A;  2QRC B;  1K8A 1;  1RLY A;  3VMG A;  2QRD B;  1NJI 2;  4X6A I;  1VQO Z;  2QA4 Z;  3BG1 B;  1SFO I;  3GTL I;  4DGL A;  1YUK A;  1QF8 A;  3RZD I;  1Q81 2;  2KI7 B;  3MZK B;  3CCJ 1;  3S16 I;  3CCE Z;  3CCL 1;  4BY7 I;  1X3Z A;  3FQM A;  1YIJ Z;  2JA5 I;  4AYB A;  1VQ6 1;  1USP B;  1S72 Z;  5FLX b;  1Q82 2;  3KIF A;  3Q87 A;  3VTN A;  3VB9 A;  3CCM Z;  2DE5 A;  3FQQ A;  1Q81 1;  2NVT I;  1RQF A;  4HH4 A;  4A3L I;  3CC2 Z;  1KQS Y;  1TWH I;  3IX0 A;  1VQ5 Z;  2R92 I;  3JAM b;  3NFZ A;  1K9M 2;  3H3V J;  4HGY A;  4E2Z A;  3CMA Z;  5AN9 F;  3GTJ I;  1VQL Z;  3S14 I;  1X0T A;  3CC7 Z;  5D1O A;  4A3E I;  1K73 1;  1ML8 A;  5IT9 f;  3J81 f;  4E2W A;  2B63 I;  2OTL Z;  3U50 C;  5C4J I;  2NVY I;  3S2D I;  1K9M 1;  3MON A;  4MD9 A;  1Q7Y 2;  1Y1V I;  5A2Q f;  2JA8 I;  1Z02 A;  1VQ4 1;  2QEX Z;  2K5R A;  3I07 A;  3HOU I;  3PO2 I;  1DL6 A;  4A3B I;  3CME Z;  3P5J B;  1VLA A;  4MON A;  1KQS Z;  3I56 Z;  2WB1 A;  1ZB8 A;  1VQM 1;  3S15 I;  4RVH A;  1VQP Z;  4E2X A;  1Q7Y 1;  3S17 I;  4QTT A;  3S1N I;  1I50 I;  1JJ2 Y;  2P28 A;  5IP9 I;  1ZB9 A;  3EED A;  4BBS I;  4DQY B;  1NUI A;  3NDI A;  3HOX I;  4A93 I;  3M4O I;  4MRI A;  1QYP A;  1YJN 1;  1RO4 A;  3CCJ Z;  2E2H I;  3CCL Z;  4Y52 I;  1VQ6 Z;  4RVG A;  1R9T I;  2J6A A;  4NOZ A;  1USP A;  2Y0S A;  2IZ4 A;  1JJ2 Z;  1YJW 1;  2QLV B;  2P3Y A;  3K7A I;  3CD6 1;  4XX2 A;  1WW9 A;  1VQK Z;  3GCF A;  4TNU A;  5FLM I;  5C4X I;  5T6B A;  3CCQ 1;  3PO3 I;  3CCU 1;  1KRL A;  3VMH A;  3NDJ A;  1YHQ 1;  4S1T A;  3CPW Y;  1KC8 1;  4DK1 A;  2PK7 A;  1M90 2;  2VF1 A;  1W2B Y;  1VQ4 Z;  3RZO I;  3BG0 B;  1Q86 2;  5FLX f;  1NJI 1;  3G4S Z;  1VQM Z;  1YIT 1;  1VQ7 1;  3G6E 1;  3HOV I;  2VUM I;  2OOX B;  2JR6 A;  3JAM f;  3GTQ I;  2KPI A;  4A3M I;  3HOW I;  3CCS 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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