1Y1WI

Complete rna polymerase ii elongation complex
Total Genus 6

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
6
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYTIV1 (7-10)TIV2 (8-11)TIV4 (29-32)S2 (24-28)S1 (15-19)TI1 (20-23)S3 (35-36)TIV5 (30-33)TVIII1 (38-41)O1 (90-92)TVIII2 (47-50)TIV6 (51-54)TIV7 (53-56)TI2 (59-62)TIV8 (55-58)TIV9 (60-63)S4 (70-71)TIV10 (75-78)TIV11 (76-79)TI6 (103-106)S7 (99-102)TIV12 (92-95)S8 (109-111)TIV3 (19-22)TI3 (61-64)TI5 (65-68)Updating...
connected with : NaN
molecule tags Transcription,transferase/dna-rna hybrid
publication title Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
pubmed doi rcsb
molecule keywords 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP
total genus 6
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2004-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 1y1wI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 1y1wI02
2E2II 2DE6A 4MH4A 3H0GI 4NBDA 4NB9A 3ESWA 4BBSI 2F4MA 3S14I 5CM2M 2DE5A 1Y1VS 3I07A 5FLMI 2NVTI 3M3YI 1ZB8A 1R9TI 2E2HI 3GTLI 2RBLA 1QYPA 2R93I 4A93I 5IP7I 2VUMI 3H3VJ 3HOWI 4A3II 3GTMS 4BBRI 5IP9I 3RZDI 2DE7A 2JS4A 4QTUA 1TWAI 3HOXI 4Y52I 1LQLA 3CQZI 3I4NI 3PO3S 3GTJI 3VB9A 1USPA 3GTKI 3GTPI 5C44I 1RO4A 4A3FI 3GKQA 3GTMI 2R7ZI 1TWFI 3S1QI 2JA7I 3LUSA 1X3ZA 1DL6A 1ZB9A 4X6AI 2PK7A 2F4OA 4BY1I 4QTTA 1TWCI 3GTGI 3S1RI 2P3YA 4NOZA 2AKLA 1ML8A 2NVQI 1RLYA 3S1MI 1Y1VI 3S2DI 4A3DI 2NVXI 1N2FA 3EERA 3HOZI 3U50C 4Y7NI 2E2JI 3GTQI 3K7AI 2KPIA 4NBFA 4A3GI 2JR6A 4NB8A 3HOYI 1USPB 2JNYA 3S2HI 2J6AA 1VLAA 3S15I 1K83I 3Q87A 4NBCA 3PO2I 1NUIA 3HOVI 2R92I 3PO3I 4A3JI 3D6WA 3I4MI 2K5RA 1TFIA 1Y1WI 5C4XI 2JA8I 2JA5I 4BXXI 3VMIA 4A3EI 3S17I 4A3CI 4XX2A 2YU9I 3M4OI 4A3MI 1WW9A 3GCFA 3VMGA 1SFOI 1I3QI 4A3LI 4NBAA 4NBHA 2JA6I 1PFTA 3S16I 2NVYI 4NBGA 5C3EI 4BY7I 1TWGI 4NBBA 3RZOI 3S1NI 3GTOI 1TWHI 2HF1A 4NBEA 1L1OC 3HOUI 3FKII 1I6HI 2B63I 5C4JI 1I50I 2BJOA 1WCMI 4A3KI 3VMHA 1YUAA 1X3WA 4A3BI
chains in the Genus database with same CATH superfamily
3NFZA 3CC41 4MH4A 4NBDA 1JJ2Z 2IZ3A 1QVFZ 1VQ6Z 2JIOA 1KQSZ 3S14I 3G4S1 1NJI1 1Y1VS 2I3CA 3D9XA 5IT9f 4HH4A 3CPWY 2RBLA 1Q811 1YIJZ 3TDHB 4HGYA 3CCL1 3CD6Z 2O4HA 1NJI2 2W03A 4QTUA 2QEXZ 1TWAI 3PO3S 3GTJI 3T4NB 2VPZA 3GTPI 1RO4A 3OW2Z 1Q812 2V8IA 3IR7A 3I55Z 3D2LA 2JA7I 1DL6A 1FDIA 1YJNZ 2OZKA 2F4OA 1Z03A 1VQO1 2YADA 2AKLA 4E30A 2NVQI 3J81b 3S1MI 2VPYA 2NVXI 1VQNZ 1ZH1A 2KPIA 3BG0B 3MZKB 2PMZA 1VQ41 5T64A 1RQFA 1K83I 3Q87A 4NBCA 3CCRZ 1NUIA 3QWUA 3JAMf 2K5RA 3I56Z 5C4XI 2RIQA 2RT9A 4A3EI 4E2YA 1YHQZ 1X0TA 2JIPA 5A2Qf 2GTHA 3CCE1 1SFOI 1I3QI 2QLVB 4NBHA 3G711 2JA6I 3G6E1 5FLXb 1Q821 1YJWZ 5D1PA 3RZOI 3EEDA 1I50I 3CC7Z 3CCJZ 2ZAEB 1FDOA 1VQP1 1QVGZ 2E2II 5T67A 3CC4Z 4E2XA 1YI21 2KI7B 4NB9A 3CCQ1 4E33A 3G4SZ 5CM2M 1Q822 2K3RA 5FLMI 3CXCY 1VQ71 1R9TI 1YIT1 3P5JB 1QYPA 3BG1B 2R93I 1JWHC 4RVDA 2PM9A 2RHBA 3GTMS 3CCLZ 4BBRI 3NH8A 5IT9b 4RS4A 3MONA 3FQQA 2VUGA 1K8A1 1WIIA 3GTKI 4A3FI 3GTMI 3GKQA 2WB1A 4MD9A 3S1QI 1RNIA 1KD11 1Z02A 1W2BY 1VQOZ 2OTL1 2P3YA 4CL1A 2NAPA 1Q16A 1RLYA 1K8A2 1Y1VI 3J7A4 3CCV1 3MZLB 3CME1 2E9HA 3EERA 4RVGA 2E2JI 1KD12 1VQ51 2OTJ1 2JIRA 4NB8A 2Y0SA 4EWCA 4DGLA 4RVHA 3S2HI 1VQ4Z 3TE5B 1QF8A 4E2ZA 2EGTA 2LIYA 1M901 2V8KA 4TNUA 2R92I 3PO3I 4A3JI 1N8R1 3NDJA 1Y1WI 2JA8I 1JJ2Y 4A3CI 1QVFY 2AYDA 2YU9I 4DK1A 3CCEZ 1KQSY 4A3MI 1RO0A 3GCFA 2QA41 1M902 3G71Z 4NBAA 3JAMb 1PFTA 1Y8CA 3G6EZ 3S16I 1NP6A 4NBGA 3CCU1 1N8R2 3GTOI 1L1OC 4RVFA 3FKII 1I6HI 1VQK1 5A2Qb 1VQPZ 4A3BI 1YI2Z 3ESWA 3CCQZ 2E7ZA 4BBSI 2RPRA 2IV2X 2F4MA 3HKZA 2DE5A 1QXFA 2JIMA 3OW2Y 1VQ7Z 2LEXA 4E32A 1Q861 3M3YI 1YITZ 5T6BA 2E2HI 3GTLI 2JUBA 3F3PC 4AYBA 3IFUA 5IP7I 3H3VJ 3HOWI 4A3II 5IP9I 2LFUA 3CCS1 2G2KA 4Y52I 1LQLA 3CQZI 3I4NI 3J80f 1Q862 1RO2A 2QR1B 1VQM1 1AA6A 1TWFI 5AN9F 3CPWZ 3LUSA 1X3ZA 1ZB9A 4X6AI 2PK7A 2OTLZ 4BY1I 5D1OA 1TWCI 2QKDA 3GTGI 1ML8A 3CCM1 1VQ91 3VTNA 3S2DI 3CCVZ 3CMEZ 1YJ91 1N2FA 3HOZI 4E2WA 3U50C 4Y7NI 1YHQ1 1S7MA 3K7AI 3GTQI 1VQ5Z 2OTJZ 4NBFA 4A3GI 2JR6A 1YUKA 3IF8A 4MD8A 2V8JA 4MONA 2JNYA 1VQL1 1VLAA 3S15I 1Z01A 1VQ81 3PO2I 3CC21 2Q4ZA 5D1OB 2O53A 4HGZA 3I4MI 1KRLA 1QVGY 4MXUA 2JA5I 4BXXI 3VMIA 3S17I 4XX2A 3CMA1 2W04A 2QA4Z 1WW9A 4A3LI 3FQMA 2GTIA 3CCUZ 5C3EI 4BY7I 1TWHI 1VQKZ 3HOUI 2WAQA 5C4JI 4NH1C 2Q51A 1WCMI 3VMHA 1S721 1YUAA 2DE6A 2OOYB 3H0GI 4S1TA 1VQ61 2IZ4A 1P9NA 3I07A 2NVTI 3F3FC 1ZB8A 1YIJ1 3NH4A 3KIFA 4A93I 2VPWA 2VUMI 3RZDI 2DE7A 2JS4A 1Q7Y1 2OOXB 3CD61 3CCSZ 2QEX1 3HOXI 3VB9A 3J81f 1VQMZ 1USPA 4DQYB 5C44I 2R7ZI 3CXCZ 3I551 3KIHA 2M6NA 2H85A 1K731 1M1K1 1YJN1 4QTTA 1Q7Y2 3CCMZ 3S1RI 4NOZA 3J80b 1VQ9Z 2QREB 4NFRA 1YJ9Z 4A3DI 3IX0A 2JMOA 1VQN1 1K9M1 4RV9A 2VF1A 1K732 3HOYI 1M1K2 1USPB 2GU2A 2VPXA 2J6AA 1VQLZ 2R6MA 1W2BZ 1KC81 1VQ8Z 2V45A 3NH5A 5LL6f 3CC2Z 3CCR1 3HOVI 1WJ2A 4MRIA 4MD7A 1K9M2 3D6WA 5FLXf 1TFIA 3I561 2M48A 2V3VA 3CMAZ 3M4OI 1KC82 2JIQA 2HU9A 3VMGA 2QRCB 1SIWA 4E31A 2NVYI 1TWGI 4NBBA 1YJW1 3S1NI 2HF1A 1WZNA 4NBEA 2B63I 2BJOA 2QRDB 1S72Z 3CC71 3NDIA 4A3KI 1X3WA 3CCJ1 2P28A
chains in the Genus database with same CATH topology
3NFZA 3CC41 4MH4A 4NBDA 1JJ2Z 2IZ3A 1QVFZ 1VQ6Z 1KQSZ 3S14I 3G4S1 1NJI1 1Y1VS 2I3CA 3D9XA 5IT9f 4HH4A 3CPWY 2RBLA 1Q811 1YIJZ 3TDHB 4HGYA 3CCL1 3CD6Z 2O4HA 1NJI2 2W03A 4QTUA 2QEXZ 1TWAI 3PO3S 3GTJI 3T4NB 3GTPI 1RO4A 3OW2Z 1Q812 2V8IA 3I55Z 2JA7I 1DL6A 1YJNZ 2OZKA 2F4OA 1Z03A 1VQO1 2YADA 2AKLA 4E30A 2NVQI 3J81b 3S1MI 2NVXI 1VQNZ 1ZH1A 2KPIA 3BG0B 3MZKB 2PMZA 1VQ41 5T64A 1RQFA 1K83I 3Q87A 4NBCA 3CCRZ 1NUIA 3QWUA 3JAMf 2K5RA 3I56Z 5C4XI 2RIQA 2RT9A 4A3EI 4E2YA 1YHQZ 1X0TA 5A2Qf 2GTHA 3CCE1 1SFOI 1I3QI 2QLVB 4NBHA 3G711 2JA6I 3G6E1 5FLXb 1Q821 1YJWZ 5D1PA 3RZOI 3EEDA 1I50I 3CC7Z 3CCJZ 2ZAEB 1VQP1 1QVGZ 2E2II 3CC4Z 5T67A 4E2XA 1YI21 2KI7B 4NB9A 3CCQ1 4E33A 3G4SZ 5CM2M 1Q822 2K3RA 5FLMI 3CXCY 1VQ71 1R9TI 1YIT1 3P5JB 1QYPA 3BG1B 2R93I 1JWHC 4RVDA 2PM9A 2RHBA 3GTMS 3CCLZ 4BBRI 3NH8A 5IT9b 4RS4A 3MONA 3FQQA 2VUGA 1K8A1 1WIIA 3GTKI 4A3FI 3GTMI 3GKQA 2WB1A 4MD9A 3S1QI 1RNIA 1KD11 1Z02A 1W2BY 1VQOZ 2OTL1 2P3YA 4CL1A 3J7A4 1RLYA 1K8A2 1Y1VI 3CCV1 3MZLB 3CME1 2E9HA 3EERA 4RVGA 2E2JI 1KD12 1VQ51 2OTJ1 4NB8A 2Y0SA 4EWCA 4DGLA 4RVHA 3S2HI 1VQ4Z 3TE5B 1QF8A 4E2ZA 2EGTA 2LIYA 1M901 2V8KA 4TNUA 2R92I 3PO3I 4A3JI 1N8R1 3NDJA 1Y1WI 2JA8I 1JJ2Y 4A3CI 1QVFY 2YU9I 4DK1A 3CCEZ 1KQSY 4A3MI 1RO0A 3GCFA 2QA41 1M902 3G71Z 4NBAA 3JAMb 1PFTA 3G6EZ 3S16I 1NP6A 4NBGA 3CCU1 1N8R2 3GTOI 1L1OC 4RVFA 3FKII 1I6HI 1VQK1 5A2Qb 1VQPZ 4A3BI 1YI2Z 3ESWA 3CCQZ 4BBSI 2RPRA 2F4MA 3HKZA 2DE5A 3OW2Y 1VQ7Z 4E32A 1Q861 3M3YI 1YITZ 5T6BA 2E2HI 3GTLI 2JUBA 3F3PC 4AYBA 3IFUA 5IP7I 3H3VJ 3HOWI 4A3II 5IP9I 2LFUA 3CCS1 2G2KA 4Y52I 1LQLA 3CQZI 3I4NI 3J80f 1Q862 1RO2A 2QR1B 1VQM1 1TWFI 5AN9F 3CPWZ 3LUSA 1X3ZA 1ZB9A 4X6AI 2PK7A 2OTLZ 4BY1I 5D1OA 1TWCI 2QKDA 3GTGI 1ML8A 3CCM1 1VQ91 3VTNA 3S2DI 3CCVZ 3CMEZ 1YJ91 1N2FA 3HOZI 4E2WA 3U50C 4Y7NI 1YHQ1 1S7MA 3K7AI 3GTQI 1VQ5Z 2OTJZ 4NBFA 4A3GI 2JR6A 1YUKA 3IF8A 4MD8A 2V8JA 4MONA 2JNYA 1VQL1 1VLAA 3S15I 1Z01A 1VQ81 3PO2I 3CC21 2Q4ZA 5D1OB 2O53A 4HGZA 3I4MI 1KRLA 1QVGY 4MXUA 2JA5I 4BXXI 3VMIA 3S17I 4XX2A 3CMA1 2W04A 2QA4Z 1WW9A 4A3LI 3FQMA 2GTIA 3CCUZ 5C3EI 4BY7I 1TWHI 1VQKZ 3HOUI 2WAQA 5C4JI 4NH1C 2Q51A 1WCMI 3VMHA 1S721 1YUAA 2DE6A 2OOYB 3H0GI 4S1TA 1VQ61 2IZ4A 1P9NA 3I07A 2NVTI 3F3FC 1ZB8A 1YIJ1 3NH4A 3KIFA 4A93I 2VUMI 3RZDI 2DE7A 2JS4A 1Q7Y1 2OOXB 3CD61 3CCSZ 2QEX1 3HOXI 3VB9A 3J81f 1VQMZ 1USPA 4DQYB 5C44I 2R7ZI 3CXCZ 3I551 3KIHA 2M6NA 2H85A 1K731 1M1K1 1YJN1 4QTTA 1Q7Y2 3CCMZ 3S1RI 4NOZA 3J80b 1VQ9Z 2QREB 4NFRA 1YJ9Z 4A3DI 3IX0A 2JMOA 1VQN1 1K9M1 4RV9A 2VF1A 1K732 3HOYI 1M1K2 1USPB 2GU2A 2J6AA 1VQLZ 2R6MA 1W2BZ 1KC81 1VQ8Z 3NH5A 5LL6f 3CC2Z 3CCR1 3HOVI 4MRIA 4MD7A 1K9M2 3D6WA 5FLXf 1TFIA 3I561 2M48A 3CMAZ 3M4OI 1KC82 2HU9A 3VMGA 2QRCB 4E31A 2NVYI 1TWGI 4NBBA 1YJW1 3S1NI 2HF1A 4NBEA 2B63I 2BJOA 2QRDB 1S72Z 3CC71 3NDIA 4A3KI 1X3WA 3CCJ1 2P28A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2E2I I;  2DE6 A;  4MH4 A;  3H0G I;  4NBD A;  4NB9 A;  3ESW A;  4BBS I;  2F4M A;  3S14 I;  5CM2 M;  2DE5 A;  1Y1V S;  3I07 A;  5FLM I;  2NVT I;  3M3Y I;  1ZB8 A;  1R9T I;  2E2H I;  3GTL I;  2RBL A;  1QYP A;  2R93 I;  4A93 I;  5IP7 I;  2VUM I;  3H3V J;  3HOW I;  4A3I I;  3GTM S;  4BBR I;  5IP9 I;  3RZD I;  2DE7 A;  2JS4 A;  4QTU A;  1TWA I;  3HOX I;  4Y52 I;  1LQL A;  3CQZ I;  3I4N I;  3PO3 S;  3GTJ I;  3VB9 A;  1USP A;  3GTK I;  3GTP I;  5C44 I;  1RO4 A;  4A3F I;  3GKQ A;  3GTM I;  2R7Z I;  1TWF I;  3S1Q I;  2JA7 I;  3LUS A;  1X3Z A;  1DL6 A;  1ZB9 A;  4X6A I;  2PK7 A;  2F4O A;  4BY1 I;  4QTT A;  1TWC I;  3GTG I;  3S1R I;  2P3Y A;  4NOZ A;  2AKL A;  1ML8 A;  2NVQ I;  1RLY A;  3S1M I;  1Y1V I;  3S2D I;  4A3D I;  2NVX I;  1N2F A;  3EER A;  3HOZ I;  3U50 C;  4Y7N I;  2E2J I;  3GTQ I;  3K7A I;  2KPI A;  4NBF A;  4A3G I;  2JR6 A;  4NB8 A;  3HOY I;  1USP B;  2JNY A;  3S2H I;  2J6A A;  1VLA A;  3S15 I;  1K83 I;  3Q87 A;  4NBC A;  3PO2 I;  1NUI A;  3HOV I;  2R92 I;  3PO3 I;  4A3J I;  3D6W A;  3I4M I;  2K5R A;  1TFI A;  1Y1W I;  5C4X I;  2JA8 I;  2JA5 I;  4BXX I;  3VMI A;  4A3E I;  3S17 I;  4A3C I;  4XX2 A;  2YU9 I;  3M4O I;  4A3M I;  1WW9 A;  3GCF A;  3VMG A;  1SFO I;  1I3Q I;  4A3L I;  4NBA A;  4NBH A;  2JA6 I;  1PFT A;  3S16 I;  2NVY I;  4NBG A;  5C3E I;  4BY7 I;  1TWG I;  4NBB A;  3RZO I;  3S1N I;  3GTO I;  1TWH I;  2HF1 A;  4NBE A;  1L1O C;  3HOU I;  3FKI I;  1I6H I;  2B63 I;  5C4J I;  1I50 I;  2BJO A;  1WCM I;  4A3K I;  3VMH A;  1YUA A;  1X3W A;  4A3B I; 
#chains in the Genus database with same CATH topology
 3NFZ A;  3CC4 1;  4MH4 A;  4NBD A;  1JJ2 Z;  2IZ3 A;  1QVF Z;  1VQ6 Z;  2JIO A;  1KQS Z;  3S14 I;  3G4S 1;  1NJI 1;  1Y1V S;  2I3C A;  3D9X A;  5IT9 f;  4HH4 A;  3CPW Y;  2RBL A;  1Q81 1;  1YIJ Z;  3TDH B;  4HGY A;  3CCL 1;  3CD6 Z;  2O4H A;  1NJI 2;  2W03 A;  4QTU A;  2QEX Z;  1TWA I;  3PO3 S;  3GTJ I;  3T4N B;  2VPZ A;  3GTP I;  1RO4 A;  3OW2 Z;  1Q81 2;  2V8I A;  3IR7 A;  3I55 Z;  3D2L A;  2JA7 I;  1DL6 A;  1FDI A;  1YJN Z;  2OZK A;  2F4O A;  1Z03 A;  1VQO 1;  2YAD A;  2AKL A;  4E30 A;  2NVQ I;  3J81 b;  3S1M I;  2VPY A;  2NVX I;  1VQN Z;  1ZH1 A;  2KPI A;  3BG0 B;  3MZK B;  2PMZ A;  1VQ4 1;  5T64 A;  1RQF A;  1K83 I;  3Q87 A;  4NBC A;  3CCR Z;  1NUI A;  3QWU A;  3JAM f;  2K5R A;  3I56 Z;  5C4X I;  2RIQ A;  2RT9 A;  4A3E I;  4E2Y A;  1YHQ Z;  1X0T A;  2JIP A;  5A2Q f;  2GTH A;  3CCE 1;  1SFO I;  1I3Q I;  2QLV B;  4NBH A;  3G71 1;  2JA6 I;  3G6E 1;  5FLX b;  1Q82 1;  1YJW Z;  5D1P A;  3RZO I;  3EED A;  1I50 I;  3CC7 Z;  3CCJ Z;  2ZAE B;  1FDO A;  1VQP 1;  1QVG Z;  2E2I I;  5T67 A;  3CC4 Z;  4E2X A;  1YI2 1;  2KI7 B;  4NB9 A;  3CCQ 1;  4E33 A;  3G4S Z;  5CM2 M;  1Q82 2;  2K3R A;  5FLM I;  3CXC Y;  1VQ7 1;  1R9T I;  1YIT 1;  3P5J B;  1QYP A;  3BG1 B;  2R93 I;  1JWH C;  4RVD A;  2PM9 A;  2RHB A;  3GTM S;  3CCL Z;  4BBR I;  3NH8 A;  5IT9 b;  4RS4 A;  3MON A;  3FQQ A;  2VUG A;  1K8A 1;  1WII A;  3GTK I;  4A3F I;  3GTM I;  3GKQ A;  2WB1 A;  4MD9 A;  3S1Q I;  1RNI A;  1KD1 1;  1Z02 A;  1W2B Y;  1VQO Z;  2OTL 1;  2P3Y A;  4CL1 A;  2NAP A;  1Q16 A;  1RLY A;  1K8A 2;  1Y1V I;  3J7A 4;  3CCV 1;  3MZL B;  3CME 1;  2E9H A;  3EER A;  4RVG A;  2E2J I;  1KD1 2;  1VQ5 1;  2OTJ 1;  2JIR A;  4NB8 A;  2Y0S A;  4EWC A;  4DGL A;  4RVH A;  3S2H I;  1VQ4 Z;  3TE5 B;  1QF8 A;  4E2Z A;  2EGT A;  2LIY A;  1M90 1;  2V8K A;  4TNU A;  2R92 I;  3PO3 I;  4A3J I;  1N8R 1;  3NDJ A;  1Y1W I;  2JA8 I;  1JJ2 Y;  4A3C I;  1QVF Y;  2AYD A;  2YU9 I;  4DK1 A;  3CCE Z;  1KQS Y;  4A3M I;  1RO0 A;  3GCF A;  2QA4 1;  1M90 2;  3G71 Z;  4NBA A;  3JAM b;  1PFT A;  1Y8C A;  3G6E Z;  3S16 I;  1NP6 A;  4NBG A;  3CCU 1;  1N8R 2;  3GTO I;  1L1O C;  4RVF A;  3FKI I;  1I6H I;  1VQK 1;  5A2Q b;  1VQP Z;  4A3B I;  1YI2 Z;  3ESW A;  3CCQ Z;  2E7Z A;  4BBS I;  2RPR A;  2IV2 X;  2F4M A;  3HKZ A;  2DE5 A;  1QXF A;  2JIM A;  3OW2 Y;  1VQ7 Z;  2LEX A;  4E32 A;  1Q86 1;  3M3Y I;  1YIT Z;  5T6B A;  2E2H I;  3GTL I;  2JUB A;  3F3P C;  4AYB A;  3IFU A;  5IP7 I;  3H3V J;  3HOW I;  4A3I I;  5IP9 I;  2LFU A;  3CCS 1;  2G2K A;  4Y52 I;  1LQL A;  3CQZ I;  3I4N I;  3J80 f;  1Q86 2;  1RO2 A;  2QR1 B;  1VQM 1;  1AA6 A;  1TWF I;  5AN9 F;  3CPW Z;  3LUS A;  1X3Z A;  1ZB9 A;  4X6A I;  2PK7 A;  2OTL Z;  4BY1 I;  5D1O A;  1TWC I;  2QKD A;  3GTG I;  1ML8 A;  3CCM 1;  1VQ9 1;  3VTN A;  3S2D I;  3CCV Z;  3CME Z;  1YJ9 1;  1N2F A;  3HOZ I;  4E2W A;  3U50 C;  4Y7N I;  1YHQ 1;  1S7M A;  3K7A I;  3GTQ I;  1VQ5 Z;  2OTJ Z;  4NBF A;  4A3G I;  2JR6 A;  1YUK A;  3IF8 A;  4MD8 A;  2V8J A;  4MON A;  2JNY A;  1VQL 1;  1VLA A;  3S15 I;  1Z01 A;  1VQ8 1;  3PO2 I;  3CC2 1;  2Q4Z A;  5D1O B;  2O53 A;  4HGZ A;  3I4M I;  1KRL A;  1QVG Y;  4MXU A;  2JA5 I;  4BXX I;  3VMI A;  3S17 I;  4XX2 A;  3CMA 1;  2W04 A;  2QA4 Z;  1WW9 A;  4A3L I;  3FQM A;  2GTI A;  3CCU Z;  5C3E I;  4BY7 I;  1TWH I;  1VQK Z;  3HOU I;  2WAQ A;  5C4J I;  4NH1 C;  2Q51 A;  1WCM I;  3VMH A;  1S72 1;  1YUA A;  2DE6 A;  2OOY B;  3H0G I;  4S1T A;  1VQ6 1;  2IZ4 A;  1P9N A;  3I07 A;  2NVT I;  3F3F C;  1ZB8 A;  1YIJ 1;  3NH4 A;  3KIF A;  4A93 I;  2VPW A;  2VUM I;  3RZD I;  2DE7 A;  2JS4 A;  1Q7Y 1;  2OOX B;  3CD6 1;  3CCS Z;  2QEX 1;  3HOX I;  3VB9 A;  3J81 f;  1VQM Z;  1USP A;  4DQY B;  5C44 I;  2R7Z I;  3CXC Z;  3I55 1;  3KIH A;  2M6N A;  2H85 A;  1K73 1;  1M1K 1;  1YJN 1;  4QTT A;  1Q7Y 2;  3CCM Z;  3S1R I;  4NOZ A;  3J80 b;  1VQ9 Z;  2QRE B;  4NFR A;  1YJ9 Z;  4A3D I;  3IX0 A;  2JMO A;  1VQN 1;  1K9M 1;  4RV9 A;  2VF1 A;  1K73 2;  3HOY I;  1M1K 2;  1USP B;  2GU2 A;  2VPX A;  2J6A A;  1VQL Z;  2R6M A;  1W2B Z;  1KC8 1;  1VQ8 Z;  2V45 A;  3NH5 A;  5LL6 f;  3CC2 Z;  3CCR 1;  3HOV I;  1WJ2 A;  4MRI A;  4MD7 A;  1K9M 2;  3D6W A;  5FLX f;  1TFI A;  3I56 1;  2M48 A;  2V3V A;  3CMA Z;  3M4O I;  1KC8 2;  2JIQ A;  2HU9 A;  3VMG A;  2QRC B;  1SIW A;  4E31 A;  2NVY I;  1TWG I;  4NBB A;  1YJW 1;  3S1N I;  2HF1 A;  1WZN A;  4NBE A;  2B63 I;  2BJO A;  2QRD B;  1S72 Z;  3CC7 1;  3NDI A;  4A3K I;  1X3W A;  3CCJ 1;  2P28 A; 
#chains in the Genus database with same CATH homology
 3NFZ A;  3CC4 1;  4MH4 A;  4NBD A;  1JJ2 Z;  2IZ3 A;  1QVF Z;  1VQ6 Z;  1KQS Z;  3S14 I;  3G4S 1;  1NJI 1;  1Y1V S;  2I3C A;  3D9X A;  5IT9 f;  4HH4 A;  3CPW Y;  2RBL A;  1Q81 1;  1YIJ Z;  3TDH B;  4HGY A;  3CCL 1;  3CD6 Z;  2O4H A;  1NJI 2;  2W03 A;  4QTU A;  2QEX Z;  1TWA I;  3PO3 S;  3GTJ I;  3T4N B;  3GTP I;  1RO4 A;  3OW2 Z;  1Q81 2;  2V8I A;  3I55 Z;  2JA7 I;  1DL6 A;  1YJN Z;  2OZK A;  2F4O A;  1Z03 A;  1VQO 1;  2YAD A;  2AKL A;  4E30 A;  2NVQ I;  3J81 b;  3S1M I;  2NVX I;  1VQN Z;  1ZH1 A;  2KPI A;  3BG0 B;  3MZK B;  2PMZ A;  1VQ4 1;  5T64 A;  1RQF A;  1K83 I;  3Q87 A;  4NBC A;  3CCR Z;  1NUI A;  3QWU A;  3JAM f;  2K5R A;  3I56 Z;  5C4X I;  2RIQ A;  2RT9 A;  4A3E I;  4E2Y A;  1YHQ Z;  1X0T A;  5A2Q f;  2GTH A;  3CCE 1;  1SFO I;  1I3Q I;  2QLV B;  4NBH A;  3G71 1;  2JA6 I;  3G6E 1;  5FLX b;  1Q82 1;  1YJW Z;  5D1P A;  3RZO I;  3EED A;  1I50 I;  3CC7 Z;  3CCJ Z;  2ZAE B;  1VQP 1;  1QVG Z;  2E2I I;  3CC4 Z;  5T67 A;  4E2X A;  1YI2 1;  2KI7 B;  4NB9 A;  3CCQ 1;  4E33 A;  3G4S Z;  5CM2 M;  1Q82 2;  2K3R A;  5FLM I;  3CXC Y;  1VQ7 1;  1R9T I;  1YIT 1;  3P5J B;  1QYP A;  3BG1 B;  2R93 I;  1JWH C;  4RVD A;  2PM9 A;  2RHB A;  3GTM S;  3CCL Z;  4BBR I;  3NH8 A;  5IT9 b;  4RS4 A;  3MON A;  3FQQ A;  2VUG A;  1K8A 1;  1WII A;  3GTK I;  4A3F I;  3GTM I;  3GKQ A;  2WB1 A;  4MD9 A;  3S1Q I;  1RNI A;  1KD1 1;  1Z02 A;  1W2B Y;  1VQO Z;  2OTL 1;  2P3Y A;  4CL1 A;  3J7A 4;  1RLY A;  1K8A 2;  1Y1V I;  3CCV 1;  3MZL B;  3CME 1;  2E9H A;  3EER A;  4RVG A;  2E2J I;  1KD1 2;  1VQ5 1;  2OTJ 1;  4NB8 A;  2Y0S A;  4EWC A;  4DGL A;  4RVH A;  3S2H I;  1VQ4 Z;  3TE5 B;  1QF8 A;  4E2Z A;  2EGT A;  2LIY A;  1M90 1;  2V8K A;  4TNU A;  2R92 I;  3PO3 I;  4A3J I;  1N8R 1;  3NDJ A;  1Y1W I;  2JA8 I;  1JJ2 Y;  4A3C I;  1QVF Y;  2YU9 I;  4DK1 A;  3CCE Z;  1KQS Y;  4A3M I;  1RO0 A;  3GCF A;  2QA4 1;  1M90 2;  3G71 Z;  4NBA A;  3JAM b;  1PFT A;  3G6E Z;  3S16 I;  1NP6 A;  4NBG A;  3CCU 1;  1N8R 2;  3GTO I;  1L1O C;  4RVF A;  3FKI I;  1I6H I;  1VQK 1;  5A2Q b;  1VQP Z;  4A3B I;  1YI2 Z;  3ESW A;  3CCQ Z;  4BBS I;  2RPR A;  2F4M A;  3HKZ A;  2DE5 A;  3OW2 Y;  1VQ7 Z;  4E32 A;  1Q86 1;  3M3Y I;  1YIT Z;  5T6B A;  2E2H I;  3GTL I;  2JUB A;  3F3P C;  4AYB A;  3IFU A;  5IP7 I;  3H3V J;  3HOW I;  4A3I I;  5IP9 I;  2LFU A;  3CCS 1;  2G2K A;  4Y52 I;  1LQL A;  3CQZ I;  3I4N I;  3J80 f;  1Q86 2;  1RO2 A;  2QR1 B;  1VQM 1;  1TWF I;  5AN9 F;  3CPW Z;  3LUS A;  1X3Z A;  1ZB9 A;  4X6A I;  2PK7 A;  2OTL Z;  4BY1 I;  5D1O A;  1TWC I;  2QKD A;  3GTG I;  1ML8 A;  3CCM 1;  1VQ9 1;  3VTN A;  3S2D I;  3CCV Z;  3CME Z;  1YJ9 1;  1N2F A;  3HOZ I;  4E2W A;  3U50 C;  4Y7N I;  1YHQ 1;  1S7M A;  3K7A I;  3GTQ I;  1VQ5 Z;  2OTJ Z;  4NBF A;  4A3G I;  2JR6 A;  1YUK A;  3IF8 A;  4MD8 A;  2V8J A;  4MON A;  2JNY A;  1VQL 1;  1VLA A;  3S15 I;  1Z01 A;  1VQ8 1;  3PO2 I;  3CC2 1;  2Q4Z A;  5D1O B;  2O53 A;  4HGZ A;  3I4M I;  1KRL A;  1QVG Y;  4MXU A;  2JA5 I;  4BXX I;  3VMI A;  3S17 I;  4XX2 A;  3CMA 1;  2W04 A;  2QA4 Z;  1WW9 A;  4A3L I;  3FQM A;  2GTI A;  3CCU Z;  5C3E I;  4BY7 I;  1TWH I;  1VQK Z;  3HOU I;  2WAQ A;  5C4J I;  4NH1 C;  2Q51 A;  1WCM I;  3VMH A;  1S72 1;  1YUA A;  2DE6 A;  2OOY B;  3H0G I;  4S1T A;  1VQ6 1;  2IZ4 A;  1P9N A;  3I07 A;  2NVT I;  3F3F C;  1ZB8 A;  1YIJ 1;  3NH4 A;  3KIF A;  4A93 I;  2VUM I;  3RZD I;  2DE7 A;  2JS4 A;  1Q7Y 1;  2OOX B;  3CD6 1;  3CCS Z;  2QEX 1;  3HOX I;  3VB9 A;  3J81 f;  1VQM Z;  1USP A;  4DQY B;  5C44 I;  2R7Z I;  3CXC Z;  3I55 1;  3KIH A;  2M6N A;  2H85 A;  1K73 1;  1M1K 1;  1YJN 1;  4QTT A;  1Q7Y 2;  3CCM Z;  3S1R I;  4NOZ A;  3J80 b;  1VQ9 Z;  2QRE B;  4NFR A;  1YJ9 Z;  4A3D I;  3IX0 A;  2JMO A;  1VQN 1;  1K9M 1;  4RV9 A;  2VF1 A;  1K73 2;  3HOY I;  1M1K 2;  1USP B;  2GU2 A;  2J6A A;  1VQL Z;  2R6M A;  1W2B Z;  1KC8 1;  1VQ8 Z;  3NH5 A;  5LL6 f;  3CC2 Z;  3CCR 1;  3HOV I;  4MRI A;  4MD7 A;  1K9M 2;  3D6W A;  5FLX f;  1TFI A;  3I56 1;  2M48 A;  3CMA Z;  3M4O I;  1KC8 2;  2HU9 A;  3VMG A;  2QRC B;  4E31 A;  2NVY I;  1TWG I;  4NBB A;  1YJW 1;  3S1N I;  2HF1 A;  4NBE A;  2B63 I;  2BJO A;  2QRD B;  1S72 Z;  3CC7 1;  3NDI A;  4A3K I;  1X3W A;  3CCJ 1;  2P28 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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