1YJ9 | Genus

Total Genus 9

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	9
sequence length	56
structure length	56
Chain Sequence	TGAGTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__644081678878874__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__644081678878874__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/1YJ9/1/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__644081678878874__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"644081678878874","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/1YJ9/1/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__644081678878874__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Ribosome
publication title	Structures of MLSBK antibiotics bound to mutated large ribosomal subunits provide a structural explanation for resistance. pubmed doi rcsb
molecule keywords	23S Ribosomal RNA
total genus	9
structure length	56
sequence length	56
ec nomenclature
pdb deposition date	2005-01-13

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
1	PF01907	Ribosomal_L37e	Ribosomal protein L37e

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.30	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	1yj9100

1VQPZ 1VQOZ 1KQSY 3CXCY 3CC71 1VQNZ 1VQO1 2QA4Z 1W2BZ 1Q821 3CMEZ 3CCJZ 3CCUZ 1VQ6Z 1YJ9Z 3CMAZ 1YJNZ 1JJ2Z 3OW2Y 1S72Z 3CD61 1VQ91 1KD11 3CCLZ 1YHQZ 1VQMZ 3CCV1 1KQSZ 3CMA1 3CXCZ 3G71Z 1YJWZ 1YITZ 1YIJZ 1VQLZ 3CC4Z 3CCL1 3CCEZ 1VQ7Z 3G6EZ 1VQM1 1K9M1 1K9M2 1VQP1 1YJW1 1YIJ1 1VQL1 3G4SZ 3CC41 3CCE1 1VQ71 3G6E1 1VQN1 3CPWY 2QA41 1Q812 1VQ5Z 1K8A1 1K8A2 3I56Z 3G4S1 3CME1 3CCJ1 2OTJZ 3CCU1 1N8R1 1N8R2 1VQ61 1YJ91 3CCRZ 1YJN1 1KC82 1VQ51 1Q862 1S721 1Q861 3I561 1VQ8Z 1YHQ1 2OTJ1 1QVFY 3CC2Z 3CCMZ 1QVGY 1M1K1 1M1K2 3G711 1Q7Y2 1YIT1 2OTLZ 1NJI1 1NJI2 1VQ81 2QEXZ 1M901 1M902 3CPWZ 3CC21 1YI2Z 3CCM1 3OW2Z 1Q811 2OTL1 2QEX1 3CCQZ 3I55Z 3CCSZ 1KC81 1YI21 1VQKZ 1Q822 1QVFZ 1W2BY 1VQ4Z 1VQ9Z 3CD6Z 1QVGZ 3CCQ1 3CCR1 3I551 3CCS1 3CCVZ 1Q7Y1 1VQK1 1JJ2Y 1K731 1K732 1VQ41 1KD12 3CC7Z
chains in the Genus database with same CATH superfamily

5A2Qf 2QRDB 4NFRA 2M6NA 2QRCB 3CXCY 3I4MI 3HOUI 2OOXB 1Q16A 2QA4Z 1W2BZ 4E31A 1Q821 1WCMI 1TWCI 3VMHA 4A3CI 3HKZA 3CMEZ 3CCUZ 2EGTA 4RVGA 1YJ9Z 4A3EI 2J6AA 1YJNZ 2B63I 3P5JB 4DGLA 4A3LI 1S72Z 3NDIA 1KD11 4TNUA 3CCLZ 4NBDA 1YHQZ 3CCV1 3H0GI 3CMA1 3CXCZ 2R7ZI 2JIMA 2IZ3A 3CCEZ 3GTLI 2K3RA 1K9M2 3NFZA 3VMIA 2GU2A 1RO2A 1YIJ1 3S2DI 1VQ71 3G6E1 1I6HI 1Z02A 3QWUA 5FLXb 4E30A 3I56Z 2JA5I 3CCJ1 4MD7A 2OTJZ 3S1NI 1Y1WI 3T4NB 1FDOA 3EERA 3Q87A 1SIWA 1Q862 2JMOA 5D1OA 1VQ8Z 1TWGI 1Y8CA 2P28A 3CCMZ 1M1K1 1I3QI 3G711 3HOYI 1PFTA 1Z01A 2NAPA 1RO4A 3MZLB 1WW9A 2W04A 1M902 5C4JI 2K5RA 2OTL1 4MRIA 1DL6A 4BY7I 1RLYA 5LL6f 3J81b 1VLAA 1L1OC 1K83I 3MZKB 4MONA 1QF8A 2DE6A 2PM9A 3CCVZ 2JA8I 3FKII 2QR1B 4S1TA 1JJ2Y 1I50I 3CC7Z 1WJ2A 2VF1A 3IF8A 3GTMS 1VQOZ 1KQSY 1ZB9A 3BG1B 3BG0B 4NBHA 4Y7NI 1NP6A 1X3ZA 4E2YA 5T67A 1X3WA 2VUGA 2QREB 4HH4A 4E33A 2QLVB 1NUIA 3CCJZ 1N2FA 2NVYI 2G2KA 4DQYB 4RS4A 3NH8A 1JJ2Z 4NBCA 3OW2Y 2BJOA 2O4HA 1Z03A 2R92I 1KQSZ 2E2JI 3G71Z 5IT9b 1YJWZ 4A3KI 3CC4Z 5IP9I 4HGYA 3VB9A 1VQM1 2LIYA 3RZOI 1VQL1 2JIRA 2E2II 3S2HI 4XX2A 4RVFA 2Y0SA 3IX0A 4A3II 3HOWI 1K8A1 4E2WA 3G4S1 1USPB 2V45A 1TFIA 1VQ61 1TWHI 2GTIA 4BY1I 4Y52I 1VQ51 3D6WA 2R6MA 3F3FC 5CM2M 1QYPA 1RO0A 3CC2Z 1QVGY 4E2XA 1M1K2 3HOVI 1YIT1 2IZ4A 2RBLA 1RQFA 2WAQA 5C3EI 1QXFA 1YI2Z 4RV9A 4A3GI 1JWHC 1YUAA 3NH4A 2P3YA 3NH5A 2WB1A 2QEX1 2M48A 3CCQZ 3I55Z 1VQKZ 5T64A 2JIOA 3IR7A 1VQ4Z 1QVGZ 2NVQI 2RT9A 5C4XI 3CCS1 2IV2X 2GTHA 4X6AI 3U50C 3S15I 1WZNA 3GTGI 3J7A4 4E2ZA 2JS4A 2VPZA 4BXXI 3S14I 2H85A 1TWAI 1ZB8A 3FQQA 1USPA 3S16I 4A3MI 2PK7A 1VQ6Z 1P9NA 2E7ZA 5FLXf 3CMAZ 4CL1A 2RIQA 4NBEA 4NB8A 3D9XA 3I4NI 2V3VA 2DE7A 2Q4ZA 2KI7B 4QTTA 1YITZ 1YIJZ 3RZDI 5A2Qb 3CCL1 1VQ7Z 3G6EZ 3GKQA 4AYBA 1VQP1 2LFUA 2V8KA 3TDHB 2R93I 4NH1C 2VPXA 2W03A 3CCE1 1ZH1A 2RHBA 4DK1A 1VQN1 2JIPA 1RNIA 2RPRA 3CPWY 3VMGA 1Q812 1K8A2 3J81f 3JAMb 2F4OA 1N8R1 3M4OI 3S17I 3GTQI 1KRLA 3I561 4NOZA 2OTJ1 2JIQA 1Q7Y2 2OTLZ 1NJI1 3HOXI 4MH4A 1VQ81 3CPWZ 2OOYB 3S1MI 3KIFA 3CCM1 3OW2Z 5IP7I 2YU9I 1Q811 2HF1A 5T6BA 2V8JA 2AYDA 4A3FI 2NVTI 4HGZA 3CQZI 2LEXA 3NDJA 2JUBA 4A3JI 3CCR1 2E9HA 4NBFA 1Q7Y1 3JAMf 2PMZA 1SFOI 1K731 3D2LA 5IT9f 1VQPZ 1S7MA 2JR6A 3S1QI 1ML8A 2V8IA 2OZKA 2HU9A 3CC71 1VQNZ 4NB9A 1X0TA 1VQO1 3FQMA 2O53A 4NBAA 2JA7I 3MONA 4A3BI 3J80b 3EEDA 3S1RI 3PO3I 4A93I 5AN9F 3PO2I 1AA6A 2ZAEB 4RVDA 3CD61 1VQ91 2JA6I 1VQMZ 3H3VJ 3GTJI 5D1PA 1YUKA 1VQLZ 3GTPI 2JNYA 3VTNA 1K9M1 4RVHA 2F4MA 4MD8A 3TE5B 4MXUA 3PO3S 3GTOI 1YJW1 3M3YI 2KPIA 3G4SZ 3CC41 2Q51A 3K7AI 2AKLA 5FLMI 2I3CA 2QA41 2VPYA 1VQ5Z 5C44I 3CME1 3CCU1 1N8R2 4NBGA 1YJ91 3GTMI 3CCRZ 1YJN1 1KC82 1Y1VI 1Q861 1S721 3J80f 2DE5A 1YHQ1 3IFUA 1QVFY 2E2HI 1FDIA 3F3PC 2VUMI 4BBSI 1NJI2 3HOZI 2QEXZ 1M901 3CC21 1WIIA 4BBRI 3I07A 1Y1VS 4EWCA 4MD9A 2QKDA 2NVXI 3GTKI 3CCSZ 1KC81 1YI21 3KIHA 4A3DI 4E32A 4NBBA 1TWFI 1Q822 1QVFZ 1W2BY 3CD6Z 2YADA 1VQ9Z 3GCFA 2VPWA 3LUSA 3CCQ1 3I551 1VQK1 1LQLA 4QTUA 1K732 1VQ41 3ESWA 1KD12 1R9TI 5D1OB
chains in the Genus database with same CATH topology

5A2Qf 2QRDB 4NFRA 2M6NA 2QRCB 3CXCY 3I4MI 3HOUI 2OOXB 2QA4Z 1W2BZ 4E31A 1Q821 1WCMI 1TWCI 3VMHA 4A3CI 3HKZA 3CMEZ 3CCUZ 2EGTA 4RVGA 1YJ9Z 4A3EI 2J6AA 1YJNZ 2B63I 3P5JB 4DGLA 4A3LI 1S72Z 3NDIA 1KD11 4TNUA 3CCLZ 4NBDA 1YHQZ 3CCV1 3H0GI 3CMA1 3CXCZ 2R7ZI 2IZ3A 3CCEZ 3GTLI 2K3RA 1K9M2 3NFZA 3VMIA 2GU2A 1RO2A 1YIJ1 3S2DI 1VQ71 3G6E1 1I6HI 1Z02A 3QWUA 5FLXb 4E30A 3I56Z 2JA5I 3CCJ1 4MD7A 2OTJZ 3S1NI 1Y1WI 3T4NB 3EERA 3Q87A 1Q862 2JMOA 5D1OA 1VQ8Z 1TWGI 2P28A 3CCMZ 1M1K1 1I3QI 3G711 3HOYI 1PFTA 1Z01A 1RO4A 3MZLB 1WW9A 2W04A 1M902 5C4JI 2K5RA 2OTL1 4MRIA 1DL6A 4BY7I 1RLYA 5LL6f 3J81b 1VLAA 1L1OC 1K83I 3MZKB 4MONA 1QF8A 2DE6A 2PM9A 3CCVZ 2JA8I 3FKII 2QR1B 4S1TA 1JJ2Y 1I50I 3CC7Z 2VF1A 3IF8A 3GTMS 1VQOZ 1KQSY 1ZB9A 3BG1B 3BG0B 4NBHA 4Y7NI 1NP6A 1X3ZA 4E2YA 5T67A 1X3WA 2VUGA 2QREB 4HH4A 4E33A 2QLVB 1NUIA 3CCJZ 1N2FA 2NVYI 2G2KA 4DQYB 4RS4A 3NH8A 1JJ2Z 4NBCA 3OW2Y 2BJOA 2O4HA 1Z03A 2R92I 1KQSZ 2E2JI 3G71Z 5IT9b 1YJWZ 4A3KI 3CC4Z 5IP9I 4HGYA 3VB9A 1VQM1 2LIYA 3RZOI 1VQL1 2E2II 3S2HI 4XX2A 4RVFA 2Y0SA 3IX0A 4A3II 3HOWI 1K8A1 4E2WA 3G4S1 1USPB 1TFIA 1VQ61 1TWHI 2GTIA 4BY1I 4Y52I 1VQ51 3D6WA 2R6MA 3F3FC 5CM2M 1QYPA 1RO0A 3CC2Z 1QVGY 4E2XA 1M1K2 3HOVI 1YIT1 2IZ4A 2RBLA 1RQFA 2WAQA 5C3EI 1YI2Z 4RV9A 4A3GI 1JWHC 1YUAA 3NH4A 2P3YA 3NH5A 2WB1A 2QEX1 2M48A 3CCQZ 3I55Z 1VQKZ 5T64A 1VQ4Z 1QVGZ 2NVQI 2RT9A 5C4XI 3CCS1 2GTHA 4X6AI 3U50C 3S15I 3GTGI 3J7A4 4E2ZA 2JS4A 4BXXI 3S14I 2H85A 1TWAI 1ZB8A 3FQQA 1USPA 3S16I 4A3MI 2PK7A 1VQ6Z 1P9NA 5FLXf 3CMAZ 4CL1A 2RIQA 4NBEA 4NB8A 3D9XA 3I4NI 2DE7A 2Q4ZA 2KI7B 4QTTA 1YITZ 1YIJZ 3RZDI 5A2Qb 3CCL1 1VQ7Z 3G6EZ 3GKQA 4AYBA 1VQP1 2LFUA 2V8KA 3TDHB 2R93I 4NH1C 2W03A 3CCE1 1ZH1A 2RHBA 4DK1A 1VQN1 1RNIA 2RPRA 3CPWY 3VMGA 1Q812 1K8A2 3J81f 3JAMb 2F4OA 1N8R1 3M4OI 3S17I 3GTQI 1KRLA 3I561 4NOZA 2OTJ1 1Q7Y2 2OTLZ 1NJI1 3HOXI 4MH4A 1VQ81 3CPWZ 2OOYB 3S1MI 3KIFA 3CCM1 3OW2Z 5IP7I 2YU9I 1Q811 2HF1A 5T6BA 2V8JA 4A3FI 2NVTI 4HGZA 3CQZI 3NDJA 2JUBA 4A3JI 3CCR1 2E9HA 4NBFA 1Q7Y1 3JAMf 2PMZA 1SFOI 1K731 5IT9f 1VQPZ 1S7MA 2JR6A 3S1QI 1ML8A 2V8IA 2OZKA 2HU9A 3CC71 1VQNZ 4NB9A 1X0TA 1VQO1 3FQMA 2O53A 4NBAA 2JA7I 3MONA 4A3BI 3J80b 3EEDA 3S1RI 3PO3I 4A93I 5AN9F 3PO2I 2ZAEB 4RVDA 3CD61 1VQ91 2JA6I 1VQMZ 3H3VJ 3GTJI 5D1PA 1YUKA 1VQLZ 3GTPI 2JNYA 3VTNA 1K9M1 4RVHA 2F4MA 4MD8A 3TE5B 4MXUA 3PO3S 3GTOI 1YJW1 3M3YI 2KPIA 3G4SZ 3CC41 2Q51A 3K7AI 2AKLA 5FLMI 2I3CA 2QA41 1VQ5Z 5C44I 3CME1 3CCU1 1N8R2 4NBGA 1YJ91 3GTMI 3CCRZ 1YJN1 1KC82 1Y1VI 1Q861 1S721 3J80f 2DE5A 1YHQ1 3IFUA 1QVFY 2E2HI 3F3PC 2VUMI 4BBSI 1NJI2 3HOZI 2QEXZ 1M901 3CC21 1WIIA 4BBRI 3I07A 1Y1VS 4EWCA 4MD9A 2QKDA 2NVXI 3GTKI 3CCSZ 1KC81 1YI21 3KIHA 4A3DI 4E32A 4NBBA 1TWFI 1Q822 1QVFZ 1W2BY 3CD6Z 2YADA 1VQ9Z 3GCFA 3LUSA 3CCQ1 3I551 1VQK1 1LQLA 4QTUA 1K732 1VQ41 3ESWA 1KD12 1R9TI 5D1OB
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1VQP Z;  1VQO Z;  1KQS Y;  3CXC Y;  3CC7 1;  1VQN Z;  1VQO 1;  2QA4 Z;  1W2B Z;  1Q82 1;  3CME Z;  3CCJ Z;  3CCU Z;  1VQ6 Z;  1YJ9 Z;  3CMA Z;  1YJN Z;  1JJ2 Z;  3OW2 Y;  1S72 Z;  3CD6 1;  1VQ9 1;  1KD1 1;  3CCL Z;  1YHQ Z;  1VQM Z;  3CCV 1;  1KQS Z;  3CMA 1;  3CXC Z;  3G71 Z;  1YJW Z;  1YIT Z;  1YIJ Z;  1VQL Z;  3CC4 Z;  3CCL 1;  3CCE Z;  1VQ7 Z;  3G6E Z;  1VQM 1;  1K9M 1;  1K9M 2;  1VQP 1;  1YJW 1;  1YIJ 1;  1VQL 1;  3G4S Z;  3CC4 1;  3CCE 1;  1VQ7 1;  3G6E 1;  1VQN 1;  3CPW Y;  2QA4 1;  1Q81 2;  1VQ5 Z;  1K8A 1;  1K8A 2;  3I56 Z;  3G4S 1;  3CME 1;  3CCJ 1;  2OTJ Z;  3CCU 1;  1N8R 1;  1N8R 2;  1VQ6 1;  1YJ9 1;  3CCR Z;  1YJN 1;  1KC8 2;  1VQ5 1;  1Q86 2;  1S72 1;  1Q86 1;  3I56 1;  1VQ8 Z;  1YHQ 1;  2OTJ 1;  1QVF Y;  3CC2 Z;  3CCM Z;  1QVG Y;  1M1K 1;  1M1K 2;  3G71 1;  1Q7Y 2;  1YIT 1;  2OTL Z;  1NJI 1;  1NJI 2;  1VQ8 1;  2QEX Z;  1M90 1;  1M90 2;  3CPW Z;  3CC2 1;  1YI2 Z;  3CCM 1;  3OW2 Z;  1Q81 1;  2OTL 1;  2QEX 1;  3CCQ Z;  3I55 Z;  3CCS Z;  1KC8 1;  1YI2 1;  1VQK Z;  1Q82 2;  1QVF Z;  1W2B Y;  1VQ4 Z;  1VQ9 Z;  3CD6 Z;  1QVG Z;  3CCQ 1;  3CCR 1;  3I55 1;  3CCS 1;  3CCV Z;  1Q7Y 1;  1VQK 1;  1JJ2 Y;  1K73 1;  1K73 2;  1VQ4 1;  1KD1 2;  3CC7 Z; 
#chains in the Genus database with same CATH topology
 5A2Q f;  2QRD B;  4NFR A;  2M6N A;  2QRC B;  3CXC Y;  3I4M I;  3HOU I;  2OOX B;  1Q16 A;  2QA4 Z;  1W2B Z;  4E31 A;  1Q82 1;  1WCM I;  1TWC I;  3VMH A;  4A3C I;  3HKZ A;  3CME Z;  3CCU Z;  2EGT A;  4RVG A;  1YJ9 Z;  4A3E I;  2J6A A;  1YJN Z;  2B63 I;  3P5J B;  4DGL A;  4A3L I;  1S72 Z;  3NDI A;  1KD1 1;  4TNU A;  3CCL Z;  4NBD A;  1YHQ Z;  3CCV 1;  3H0G I;  3CMA 1;  3CXC Z;  2R7Z I;  2JIM A;  2IZ3 A;  3CCE Z;  3GTL I;  2K3R A;  1K9M 2;  3NFZ A;  3VMI A;  2GU2 A;  1RO2 A;  1YIJ 1;  3S2D I;  1VQ7 1;  3G6E 1;  1I6H I;  1Z02 A;  3QWU A;  5FLX b;  4E30 A;  3I56 Z;  2JA5 I;  3CCJ 1;  4MD7 A;  2OTJ Z;  3S1N I;  1Y1W I;  3T4N B;  1FDO A;  3EER A;  3Q87 A;  1SIW A;  1Q86 2;  2JMO A;  5D1O A;  1VQ8 Z;  1TWG I;  1Y8C A;  2P28 A;  3CCM Z;  1M1K 1;  1I3Q I;  3G71 1;  3HOY I;  1PFT A;  1Z01 A;  2NAP A;  1RO4 A;  3MZL B;  1WW9 A;  2W04 A;  1M90 2;  5C4J I;  2K5R A;  2OTL 1;  4MRI A;  1DL6 A;  4BY7 I;  1RLY A;  5LL6 f;  3J81 b;  1VLA A;  1L1O C;  1K83 I;  3MZK B;  4MON A;  1QF8 A;  2DE6 A;  2PM9 A;  3CCV Z;  2JA8 I;  3FKI I;  2QR1 B;  4S1T A;  1JJ2 Y;  1I50 I;  3CC7 Z;  1WJ2 A;  2VF1 A;  3IF8 A;  3GTM S;  1VQO Z;  1KQS Y;  1ZB9 A;  3BG1 B;  3BG0 B;  4NBH A;  4Y7N I;  1NP6 A;  1X3Z A;  4E2Y A;  5T67 A;  1X3W A;  2VUG A;  2QRE B;  4HH4 A;  4E33 A;  2QLV B;  1NUI A;  3CCJ Z;  1N2F A;  2NVY I;  2G2K A;  4DQY B;  4RS4 A;  3NH8 A;  1JJ2 Z;  4NBC A;  3OW2 Y;  2BJO A;  2O4H A;  1Z03 A;  2R92 I;  1KQS Z;  2E2J I;  3G71 Z;  5IT9 b;  1YJW Z;  4A3K I;  3CC4 Z;  5IP9 I;  4HGY A;  3VB9 A;  1VQM 1;  2LIY A;  3RZO I;  1VQL 1;  2JIR A;  2E2I I;  3S2H I;  4XX2 A;  4RVF A;  2Y0S A;  3IX0 A;  4A3I I;  3HOW I;  1K8A 1;  4E2W A;  3G4S 1;  1USP B;  2V45 A;  1TFI A;  1VQ6 1;  1TWH I;  2GTI A;  4BY1 I;  4Y52 I;  1VQ5 1;  3D6W A;  2R6M A;  3F3F C;  5CM2 M;  1QYP A;  1RO0 A;  3CC2 Z;  1QVG Y;  4E2X A;  1M1K 2;  3HOV I;  1YIT 1;  2IZ4 A;  2RBL A;  1RQF A;  2WAQ A;  5C3E I;  1QXF A;  1YI2 Z;  4RV9 A;  4A3G I;  1JWH C;  1YUA A;  3NH4 A;  2P3Y A;  3NH5 A;  2WB1 A;  2QEX 1;  2M48 A;  3CCQ Z;  3I55 Z;  1VQK Z;  5T64 A;  2JIO A;  3IR7 A;  1VQ4 Z;  1QVG Z;  2NVQ I;  2RT9 A;  5C4X I;  3CCS 1;  2IV2 X;  2GTH A;  4X6A I;  3U50 C;  3S15 I;  1WZN A;  3GTG I;  3J7A 4;  4E2Z A;  2JS4 A;  2VPZ A;  4BXX I;  3S14 I;  2H85 A;  1TWA I;  1ZB8 A;  3FQQ A;  1USP A;  3S16 I;  4A3M I;  2PK7 A;  1VQ6 Z;  1P9N A;  2E7Z A;  5FLX f;  3CMA Z;  4CL1 A;  2RIQ A;  4NBE A;  4NB8 A;  3D9X A;  3I4N I;  2V3V A;  2DE7 A;  2Q4Z A;  2KI7 B;  4QTT A;  1YIT Z;  1YIJ Z;  3RZD I;  5A2Q b;  3CCL 1;  1VQ7 Z;  3G6E Z;  3GKQ A;  4AYB A;  1VQP 1;  2LFU A;  2V8K A;  3TDH B;  2R93 I;  4NH1 C;  2VPX A;  2W03 A;  3CCE 1;  1ZH1 A;  2RHB A;  4DK1 A;  1VQN 1;  2JIP A;  1RNI A;  2RPR A;  3CPW Y;  3VMG A;  1Q81 2;  1K8A 2;  3J81 f;  3JAM b;  2F4O A;  1N8R 1;  3M4O I;  3S17 I;  3GTQ I;  1KRL A;  3I56 1;  4NOZ A;  2OTJ 1;  2JIQ A;  1Q7Y 2;  2OTL Z;  1NJI 1;  3HOX I;  4MH4 A;  1VQ8 1;  3CPW Z;  2OOY B;  3S1M I;  3KIF A;  3CCM 1;  3OW2 Z;  5IP7 I;  2YU9 I;  1Q81 1;  2HF1 A;  5T6B A;  2V8J A;  2AYD A;  4A3F I;  2NVT I;  4HGZ A;  3CQZ I;  2LEX A;  3NDJ A;  2JUB A;  4A3J I;  3CCR 1;  2E9H A;  4NBF A;  1Q7Y 1;  3JAM f;  2PMZ A;  1SFO I;  1K73 1;  3D2L A;  5IT9 f;  1VQP Z;  1S7M A;  2JR6 A;  3S1Q I;  1ML8 A;  2V8I A;  2OZK A;  2HU9 A;  3CC7 1;  1VQN Z;  4NB9 A;  1X0T A;  1VQO 1;  3FQM A;  2O53 A;  4NBA A;  2JA7 I;  3MON A;  4A3B I;  3J80 b;  3EED A;  3S1R I;  3PO3 I;  4A93 I;  5AN9 F;  3PO2 I;  1AA6 A;  2ZAE B;  4RVD A;  3CD6 1;  1VQ9 1;  2JA6 I;  1VQM Z;  3H3V J;  3GTJ I;  5D1P A;  1YUK A;  1VQL Z;  3GTP I;  2JNY A;  3VTN A;  1K9M 1;  4RVH A;  2F4M A;  4MD8 A;  3TE5 B;  4MXU A;  3PO3 S;  3GTO I;  1YJW 1;  3M3Y I;  2KPI A;  3G4S Z;  3CC4 1;  2Q51 A;  3K7A I;  2AKL A;  5FLM I;  2I3C A;  2QA4 1;  2VPY A;  1VQ5 Z;  5C44 I;  3CME 1;  3CCU 1;  1N8R 2;  4NBG A;  1YJ9 1;  3GTM I;  3CCR Z;  1YJN 1;  1KC8 2;  1Y1V I;  1Q86 1;  1S72 1;  3J80 f;  2DE5 A;  1YHQ 1;  3IFU A;  1QVF Y;  2E2H I;  1FDI A;  3F3P C;  2VUM I;  4BBS I;  1NJI 2;  3HOZ I;  2QEX Z;  1M90 1;  3CC2 1;  1WII A;  4BBR I;  3I07 A;  1Y1V S;  4EWC A;  4MD9 A;  2QKD A;  2NVX I;  3GTK I;  3CCS Z;  1KC8 1;  1YI2 1;  3KIH A;  4A3D I;  4E32 A;  4NBB A;  1TWF I;  1Q82 2;  1QVF Z;  1W2B Y;  3CD6 Z;  2YAD A;  1VQ9 Z;  3GCF A;  2VPW A;  3LUS A;  3CCQ 1;  3I55 1;  1VQK 1;  1LQL A;  4QTU A;  1K73 2;  1VQ4 1;  3ESW A;  1KD1 2;  1R9T I;  5D1O B; 
#chains in the Genus database with same CATH homology
 5A2Q f;  2QRD B;  4NFR A;  2M6N A;  2QRC B;  3CXC Y;  3I4M I;  3HOU I;  2OOX B;  2QA4 Z;  1W2B Z;  4E31 A;  1Q82 1;  1WCM I;  1TWC I;  3VMH A;  4A3C I;  3HKZ A;  3CME Z;  3CCU Z;  2EGT A;  4RVG A;  1YJ9 Z;  4A3E I;  2J6A A;  1YJN Z;  2B63 I;  3P5J B;  4DGL A;  4A3L I;  1S72 Z;  3NDI A;  1KD1 1;  4TNU A;  3CCL Z;  4NBD A;  1YHQ Z;  3CCV 1;  3H0G I;  3CMA 1;  3CXC Z;  2R7Z I;  2IZ3 A;  3CCE Z;  3GTL I;  2K3R A;  1K9M 2;  3NFZ A;  3VMI A;  2GU2 A;  1RO2 A;  1YIJ 1;  3S2D I;  1VQ7 1;  3G6E 1;  1I6H I;  1Z02 A;  3QWU A;  5FLX b;  4E30 A;  3I56 Z;  2JA5 I;  3CCJ 1;  4MD7 A;  2OTJ Z;  3S1N I;  1Y1W I;  3T4N B;  3EER A;  3Q87 A;  1Q86 2;  2JMO A;  5D1O A;  1VQ8 Z;  1TWG I;  2P28 A;  3CCM Z;  1M1K 1;  1I3Q I;  3G71 1;  3HOY I;  1PFT A;  1Z01 A;  1RO4 A;  3MZL B;  1WW9 A;  2W04 A;  1M90 2;  5C4J I;  2K5R A;  2OTL 1;  4MRI A;  1DL6 A;  4BY7 I;  1RLY A;  5LL6 f;  3J81 b;  1VLA A;  1L1O C;  1K83 I;  3MZK B;  4MON A;  1QF8 A;  2DE6 A;  2PM9 A;  3CCV Z;  2JA8 I;  3FKI I;  2QR1 B;  4S1T A;  1JJ2 Y;  1I50 I;  3CC7 Z;  2VF1 A;  3IF8 A;  3GTM S;  1VQO Z;  1KQS Y;  1ZB9 A;  3BG1 B;  3BG0 B;  4NBH A;  4Y7N I;  1NP6 A;  1X3Z A;  4E2Y A;  5T67 A;  1X3W A;  2VUG A;  2QRE B;  4HH4 A;  4E33 A;  2QLV B;  1NUI A;  3CCJ Z;  1N2F A;  2NVY I;  2G2K A;  4DQY B;  4RS4 A;  3NH8 A;  1JJ2 Z;  4NBC A;  3OW2 Y;  2BJO A;  2O4H A;  1Z03 A;  2R92 I;  1KQS Z;  2E2J I;  3G71 Z;  5IT9 b;  1YJW Z;  4A3K I;  3CC4 Z;  5IP9 I;  4HGY A;  3VB9 A;  1VQM 1;  2LIY A;  3RZO I;  1VQL 1;  2E2I I;  3S2H I;  4XX2 A;  4RVF A;  2Y0S A;  3IX0 A;  4A3I I;  3HOW I;  1K8A 1;  4E2W A;  3G4S 1;  1USP B;  1TFI A;  1VQ6 1;  1TWH I;  2GTI A;  4BY1 I;  4Y52 I;  1VQ5 1;  3D6W A;  2R6M A;  3F3F C;  5CM2 M;  1QYP A;  1RO0 A;  3CC2 Z;  1QVG Y;  4E2X A;  1M1K 2;  3HOV I;  1YIT 1;  2IZ4 A;  2RBL A;  1RQF A;  2WAQ A;  5C3E I;  1YI2 Z;  4RV9 A;  4A3G I;  1JWH C;  1YUA A;  3NH4 A;  2P3Y A;  3NH5 A;  2WB1 A;  2QEX 1;  2M48 A;  3CCQ Z;  3I55 Z;  1VQK Z;  5T64 A;  1VQ4 Z;  1QVG Z;  2NVQ I;  2RT9 A;  5C4X I;  3CCS 1;  2GTH A;  4X6A I;  3U50 C;  3S15 I;  3GTG I;  3J7A 4;  4E2Z A;  2JS4 A;  4BXX I;  3S14 I;  2H85 A;  1TWA I;  1ZB8 A;  3FQQ A;  1USP A;  3S16 I;  4A3M I;  2PK7 A;  1VQ6 Z;  1P9N A;  5FLX f;  3CMA Z;  4CL1 A;  2RIQ A;  4NBE A;  4NB8 A;  3D9X A;  3I4N I;  2DE7 A;  2Q4Z A;  2KI7 B;  4QTT A;  1YIT Z;  1YIJ Z;  3RZD I;  5A2Q b;  3CCL 1;  1VQ7 Z;  3G6E Z;  3GKQ A;  4AYB A;  1VQP 1;  2LFU A;  2V8K A;  3TDH B;  2R93 I;  4NH1 C;  2W03 A;  3CCE 1;  1ZH1 A;  2RHB A;  4DK1 A;  1VQN 1;  1RNI A;  2RPR A;  3CPW Y;  3VMG A;  1Q81 2;  1K8A 2;  3J81 f;  3JAM b;  2F4O A;  1N8R 1;  3M4O I;  3S17 I;  3GTQ I;  1KRL A;  3I56 1;  4NOZ A;  2OTJ 1;  1Q7Y 2;  2OTL Z;  1NJI 1;  3HOX I;  4MH4 A;  1VQ8 1;  3CPW Z;  2OOY B;  3S1M I;  3KIF A;  3CCM 1;  3OW2 Z;  5IP7 I;  2YU9 I;  1Q81 1;  2HF1 A;  5T6B A;  2V8J A;  4A3F I;  2NVT I;  4HGZ A;  3CQZ I;  3NDJ A;  2JUB A;  4A3J I;  3CCR 1;  2E9H A;  4NBF A;  1Q7Y 1;  3JAM f;  2PMZ A;  1SFO I;  1K73 1;  5IT9 f;  1VQP Z;  1S7M A;  2JR6 A;  3S1Q I;  1ML8 A;  2V8I A;  2OZK A;  2HU9 A;  3CC7 1;  1VQN Z;  4NB9 A;  1X0T A;  1VQO 1;  3FQM A;  2O53 A;  4NBA A;  2JA7 I;  3MON A;  4A3B I;  3J80 b;  3EED A;  3S1R I;  3PO3 I;  4A93 I;  5AN9 F;  3PO2 I;  2ZAE B;  4RVD A;  3CD6 1;  1VQ9 1;  2JA6 I;  1VQM Z;  3H3V J;  3GTJ I;  5D1P A;  1YUK A;  1VQL Z;  3GTP I;  2JNY A;  3VTN A;  1K9M 1;  4RVH A;  2F4M A;  4MD8 A;  3TE5 B;  4MXU A;  3PO3 S;  3GTO I;  1YJW 1;  3M3Y I;  2KPI A;  3G4S Z;  3CC4 1;  2Q51 A;  3K7A I;  2AKL A;  5FLM I;  2I3C A;  2QA4 1;  1VQ5 Z;  5C44 I;  3CME 1;  3CCU 1;  1N8R 2;  4NBG A;  1YJ9 1;  3GTM I;  3CCR Z;  1YJN 1;  1KC8 2;  1Y1V I;  1Q86 1;  1S72 1;  3J80 f;  2DE5 A;  1YHQ 1;  3IFU A;  1QVF Y;  2E2H I;  3F3P C;  2VUM I;  4BBS I;  1NJI 2;  3HOZ I;  2QEX Z;  1M90 1;  3CC2 1;  1WII A;  4BBR I;  3I07 A;  1Y1V S;  4EWC A;  4MD9 A;  2QKD A;  2NVX I;  3GTK I;  3CCS Z;  1KC8 1;  1YI2 1;  3KIH A;  4A3D I;  4E32 A;  4NBB A;  1TWF I;  1Q82 2;  1QVF Z;  1W2B Y;  3CD6 Z;  2YAD A;  1VQ9 Z;  3GCF A;  3LUS A;  3CCQ 1;  3I55 1;  1VQK 1;  1LQL A;  4QTU A;  1K73 2;  1VQ4 1;  3ESW A;  1KD1 2;  1R9T I;  5D1O B;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1YJ91

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations