2UXDI

Crystal structure of an extended trna anticodon stem loop in complex with its cognate mrna cggg in the context of the thermus thermophilus 30s subunit.
Total Genus 21

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
127
structure length
127
Chain Sequence
EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (7-9)S2 (14-16)TIV1 (9-12)S6 (62-63)EMPTYS5 (58-59)S3 (21-22)TIV11 (55-58)O1 (24-26)S4 (27-28)TIV3 (27-30)3H1 (33-35)TIV4 (28-31)TIV5 (35-38)AH1 (70-83)TIV6 (40-43)3H2 (43-45)TIV8 (47-50)TI1 (49-52)TIV10 (51-54)TI3 (84-87)TI4 (89-92)3H4 (97-99)TIV18 (100-103)TIV20 (116-119)TIV19 (113-116)TIV21 (117-120)3H3 (93-95)TIV13 (83-86)Updating...
connected with : NaN
molecule tags Ribosome
publication title Structures of Trnas with an Expanded Anticodon Loop in the Decoding Center of the 30S Ribosomal Subunit.
pubmed doi rcsb
molecule keywords 16S RIBOSOMAL RNA
total genus 21
structure length 127
sequence length 127
ec nomenclature
pdb deposition date 2007-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00380 Ribosomal_S9 Ribosomal protein S9/S16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Ribosomal Protein S5; domain 2 2uxdI00
1U2RA 1J5EE 3M6AA 2VQFI 1Z0CA 3B82A 2DEJA 2VQEI 1FKAE 4OX9E 4DV2I 4HXZA 1EA6A 3J80Q 3OTOI 1MG7A 4NXNI 1H7UA 1XNRI 4LF5E 2UU9E 4DR4I 5LMNE 2UXCE 1BKNA 1XHKA 3QT7A 4JI5I 1Z0GA 1FWLA 4DV7I 4HYMA 4X66E 3J7AM 4JI0E 2HFUA 4DPTA 4KHPI 5BR8E 1XMQI 3J80C 2BM0A 4GKJI 1HNWE 4JI8E 2DEIA 4LF4E 4DPYA 3F0NA 4DUYE 2UXDE 3V2UC 4DR3I 2Q2EB 4LF9I 4JI2E 4JG4A 2ZM6I 4JV5E 2WW4A 2HK2A 4JI1I 4DR5E 1DARA 2UUBI 1HNZI 4WUDA 1N0VC 1Z0BA 1NHJA 4LF7I 3T1HE 1HR0E 4I3HA 1HNXI 3HULA 1QZRA 4B3SI 1KTVA 1J5EI 2XEXA 1FI4A 1ELOA 1I94E 4DXLA 4DV4I 4Z7YA 4DV6E 3WU5A 5IT9Q 4DU8A 3ZZUA 3B78A 4JI4I 1N32I 5LMNI 1EI1A 1ZXNA 1B63A 4X66I 2ZBKB 2BV3A 4X64E 4B3TE 5BR8I 5IT9C 4LF8E 3ZKBA 2HHHI 1IBME 1Z0EA 1HNWI 4JI8I 4LF4I 1IBKE 4JI7I 2X36A 2EFGA 1WUUA 3D4JA 3QT8A 4DUYI 2HKJA 3T1YE 4UTGA 4JI2I 1OJ4A 2V8PA 4USMA 5FLXQ 4JV5I 5A2QQ 4B3ME 2F4VE 3PYFA 4FW9A 2UXBE 1RR9A 4DR5I 4LFCE 1D6TA 1IBLE 4DV3E 4JI3E 4NXME 4DPUA 3ZZ0A 1MX0A 4FWDA 2VF3A 2R42A 1HR0I 1Z5BA 2BM1A 3CWVA 4FN5A 1XMOE 4LFBE 3QT5A 3ZKDA 1K47A 1UEKA 5FLXC 3ZM7A 4AQYI 2NPFA 5A2QC 4R1FA 4PRXA 1N36E 4GKKE 4P52A 4DUZE 2UUCE 2OI2A 4DV6I 4ED4A 1Z59A 2V2QA 4LFAI 3PYDA 4YY3E 1VISA 1Z0VA 1N34E 4B3RI 4DV2E 4DV0E 5LMUI 3OTOE 4X64I 4B3TI 3LPSA 1PVGA 4DV1E 4DR6E 1IBMI 4FWHA 1H7SA 1B62A 2CZ9A 1IBKI 4OX9I 1ZXMA 2R3VA 4DU7A 2V2ZA 2E1RA 3LNUA 1H72C 4X62E 1FWKA 5L3JA 4DV5E 4LF5I 4JI6E 2UU9I 4B3MI 1Z5AA 4DR2E 3WU3A 5IWAE 4WUBA 2HFSA 4K0KE 4KQVA 4JI3I 4NXMI 3PYEA 2UXCI 4X65E 4JYAE 2A2CA 4JI0I 2ZM6E 1RREA 1NZ0A 1FNMA 4JI1E 4FWGA 1XMOI 4LFBI 1KIJA 3Q1QA 4URLA 3GONA 1Z0WA 5GMEA 1S4EA 4GKKI 4DUZI 2UUCI 2UXDI 2ZITA 4DR7E 5LL6R 4UT4A 4MYTA 4MYUA 3K1JA 2V34A 2J7KA 4B3SE 1FJGE 1S16A 4YY3I 1N33E 1N34I 3H4LA 4DV4E 1ZM4A 4DV0I 1ZM9A 3T1HI 2E5LE 2UUAE 3J7AG 3PYGA 2X7IA 2HK3A 4PU9A 3JAMQ 1Z5CA 4DV1I 4DR6I 4JI4E 1ZM3A 4LF6E 1N32E 1KVKA 3LTOA 1I94I 1XNQE 1PIEA 4YHHE 4DR1E 2GS8A 4X62I 4DV5I 1ZM2A 4JI6I 4DR2I 4M1KA 2HHHE 3K17A 5IWAI 2VQFE 4HACB 4K0KI 3JAMC 2LJPA 2VQEE 4JI7E 1H74A 4X65I 4JYAI 2V2VA 1NHHA 4NXNE 1H73A 1XNRE 4WUCA 4HACA 4LF8I 2HKEA 4DR4E 5GMDA 1Z0TA 4XTJA 4DPWA 4DPXA 4ZVIA 3ZZTA 4JI5E 4DV7E 3T1YI 4DR7I 1NHIA 4EMDA 4KHPE 3B8HA 1XMQE 2AJ4A 2F4VI 4PRVA 2UXBI 4AQYE 4GKJE 4LFCI 1FJGI 3V5RA 1IBLI 4HY1A 4DV3I 3J81Q 1N33I 3WU4A 4DR3E 2E5LI 4LF9E 2UUAI 1N0UA 3QT6A 4Z7CA 1PKPA 4LFAE 2UUBE 1HNZE 4LF6I 1A6FA 1KKHA 1N36I 4B3RE 4RPFA 4USKA 5LMUE 1XNQI 4LF7E 4P7AA 4YHHI 3J81C 4DR1I 1MU5A 2A2DA 1HNXE 3WU6A
chains in the Genus database with same CATH superfamily
2PO1A 3M7ND 4U3DA 1U2RA 1J5EE 3M6AA 2VQFI 1Z0CA 2Z5EA 3B82A 4IFDB 2DEJA 2VQEI 1FKAE 4OX9E 4J3DA 4DV2I 3P3EA 3P3CA 4HXZA 1EA6A 4ISAA 3J80Q 5DRQA 1R6LA 4FW5A 1MG7A 3OTOI 4NXNI 2BR2B 1H7UA 5C0XD 1XNRI 4LF5E 2UU9E 4IFDA 4DR4I 1UDQA 4OO1D 5LMNE 2UXCE 1BKNA 1XHKA 3QT7A 4JI5I 1Z0GA 1FWLA 4DV7I 4HYMA 4X66E 1YHCA 3J7AM 4JI0E 2HFUA 1UDNA 4DPTA 4KHPI 5BR8E 2NN6C 1XMQI 4FW3A 3J80C 1E3PA 3Q6NA 3K85A 4OO1E 2BM0A 4GKJI 1HNWE 5JEAF 4JI8E 2DEIA 4LF4E 4DPYA 3F0NA 2NN6F 4DUYE 2UXDE 3V2UC 4DR3I 1UDSA 2Q2EB 4LF9I 4JI2E 4JG4A 2ZM6I 4JV5E 4MQYA 2WW4A 2O1UA 2HK2A 4JI1I 2C37B 4DR5E 1DARA 2UUBI 1HNZI 2GO3A 4WUDA 5DROA 1N0VC 1Z0BA 2J65A 4LCHA 2PNLA 1NHJA 1Y4SA 4LF7I 3DD6A 3PS2A 4LCGA 2BA1G 3T1HE 2IESA 5FWKA 1HR0E 4I3HA 5C0XC 3CDIA 1HNXI 3HULA 2CGEA 2CG9A 1QZRA 3U1YA 4B3SI 1KTVA 2BA1D 1J5EI 2XEXA 4OO1C 3L7ZB 1FI4A 3P3GA 4AIMA 1ELOA 1Y6ZA 1I94E 4DXLA 4DV4I 5C0XF 4Z7YA 4QNJA 4DV6E 3WU5A 5IT9Q 2BA0G 4NBQA 2CVEA 4DU8A 3ZZUA 1OYSA 4IS9A 3B78A 2JEAA 1Y4UA 4JI4I 2AE8A 1N32I 5LMNI 1EI1A 2BA0D 3NZKA 1ZXNA 1B63A 5JEAE 5K36B 2Z5CB 3P06A 4X66I 2ZBKB 2BV3A 2NN6E 4X64E 4B3TE 5BR8I 4FW4A 5IT9C 4LF8E 3ZKBA 2HHHI 1IBME 2O1VA 4FW7A 1Z0EA 1HNWI 5K36A 4JI8I 2Z5CA 4LF4I 1IBKE 4JI7I 2X36A 2EFGA 1WUUA 3D4JA 3QT8A 4DUYI 2HKJA 3T1YE 4UTGA 4JI2I 2IOQA 1OJ4A 1RHYA 2V8PA 4USMA 5FLXQ 4JV5I 5A2QQ 4LPFA 4B3ME 3GCMA 2F4VE 4GQUA 3PYFA 4FW9A 2UXBE 1RR9A 4DR5I 4LFCE 1D6TA 2C38B 1IBLE 4DV3E 4JI3E 4NXME 4DPUA 4IFDF 3ZZ0A 2BR2A 1MX0A 4FWDA 5ELWA 1USVA 2VF3A 2R42A 5JEAC 4BA2B 4BA1B 1HR0I 5C0XE 1Z5BA 2BM1A 4MU3A 3CWVA 4MDTA 2WNRB 4FN5A 4QNKA 1XMOE 4LFBE 3QT5A 3ZKDA 1K47A 1UEKA 5FLXC 3ZM7A 4AQYI 2NPFA 5A2QC 4R1FA 4PRXA 1N36E 4GKKE 2NN6B 4P52A 4DUZE 2UUCE 4OZEA 2OI2A 4DV6I 2WNRA 4IZJB 2C39B 4ED4A 2IERA 4LCFA 1Z59A 5K36D 2V2QA 2F1DA 4LFAI 3PYDA 4YY3E 1VISA 1Z0VA 1N34E 4B3RI 4DV2E 4DV0E 5LMUI 2C39A 3OTOE 4IFDD 2C37A 4X64I 4B3TI 3HJCA 2GQ0A 3LPSA 3Q6MA 4MU1A 1PVGA 4DV1E 4DR6E 1IBMI 4FWHA 1H7SA 1B62A 5C0XB 1USUA 2PNMA 2CZ9A 2PO0B 1IBKI 4OX9I 3B4TA 1VI7A 1ZXMA 2R3VA 4DU7A 2V2ZA 3M85G 4IFDE 3HKMA 2E1RA 3LNUA 1H72C 4OO1B 4X62E 1FWKA 2IOPA 5L3JA 4DV5E 4LF5I 4JI6E 2UU9I 4B3MI 1Z5AA 4DR2E 2VESA 5DNXA 3L7ZA 3WU3A 2O3ZA 5IWAE 3M85D 4WUBA 2HFSA 4K0KE 4KQVA 4JI3I 4NXMI 3PYEA 2UXCI 4OO1A 4X65E 4JYAE 2A2CA 4JI0I 2ZM6E 1RREA 1NZ0A 1HK7A 2WP8B 1FNMA 4JI1E 4FWGA 1XMOI 4LFBI 5K36C 1KIJA 5DRRA 4URLA 3GONA 3Q1QA 4OKGA 1Z0WA 5GMEA 2PO1B 1S4EA 4GKKI 4DUZI 2UUCI 2UXDI 4AIDA 2WP8A 4MU0A 2ZITA 4AM3A 4DR7E 4IFDC 5K36F 5LL6R 4UT4A 4MYTA 4MYUA 3H1CA 3K1JA 2V34A 2J7KA 4B3SE 3PRYA 1FJGE 1S16A 4YY3I 1N33E 1N34I 3H4LA 4DV4E 1ZM4A 4DV0I 3GLLA 1ZM9A 3T1HI 2E5LE 1R6MA 2UUAE 3J7AG 3PYGA 2X7IA 2HK3A 4LOMA 4PU9A 1OYPA 1OYRA 2C38A 3JAMQ 1Z5CA 4DV1I 4DR6I 5JEAB 4JI4E 1ZM3A 4LF6E 1N32E 1KVKA 4BA1A 4BA2A 3LTOA 1I94I 1XNQE 1PIEA 4YHHE 4DR1E 2GS8A 5EL9A 2JT2A 2O1WA 4X62I 5JEAA 4DV5I 1ZM2A 4JI6I 4DR2I 4M1KA 2HHHE 5DNLA 2NN6A 3K17A 5IWAI 4U3BA 2VQFE 4HACB 4K0KI 3JAMC 2LJPA 2VQEE 4JI7E 4IZJA 1H74A 4X65I 3KRNA 4JYAI 2V2VA 1NHHA 4NXNE 1H73A 1XNRE 5K36E 4FW6A 4WUCA 4HACA 4LF8I 2HKEA 4DR4E 2JE6B 3PS1A 5GMDA 1Z0TA 4XTJA 4IZKB 4DPWA 4DPXA 5DRPA 4ZVIA 2PO2B 2JEBB 3ZZTA 4JI5E 4N3OA 4MU4A 4DV7E 3T1YI 2Z5BB 3UHMA 1NHIA 4DR7I 4EMDA 4KHPE 2JE6A 3B8HA 1XMQE 4IZKA 2AJ4A 2F4VI 3CDJA 5C0XA 4PRVA 2PNZB 2UXBI 2PO0A 4AQYE 4GKJE 4LFCI 1FJGI 2PO2A 3V5RA 2JEBA 1E3HA 1IBLI 4HY1A 4DV3I 3J81Q 1N33I 2Z5BA 2JEAB 3PS3A 3U1KA 2O1TA 3P76A 3WU4A 4DR3E 5JEAD 2E5LI 4LF9E 2UUAI 1N0UA 3GMEA 2PNZA 2NN6D 4OO1F 1Y60A 3QT6A 4Z7CA 1PKPA 4LFAE 2UUBE 1HNZE 2GO4A 4IZJD 4LF6I 1A6FA 1KKHA 1N36I 1P42A 4B3RE 4RPFA 4USKA 5LMUE 1XNQI 4LF7E 3M7NG 4P7AA 4YHHI 3J81C 4DR1I 5EKWA 1YH8A 1MU5A 1UDOA 2A2DA 1HNXE 1Y5YA 1XXEA 3WU6A
chains in the Genus database with same CATH topology
1U2RA 1J5EE 3M6AA 2VQFI 1Z0CA 2Z5EA 3B82A 2DEJA 2VQEI 1FKAE 4OX9E 4DV2I 4HXZA 1EA6A 3J80Q 3OTOI 1MG7A 4NXNI 1H7UA 1XNRI 4LF5E 2UU9E 4DR4I 5LMNE 2UXCE 1BKNA 1XHKA 3QT7A 4JI5I 1Z0GA 1FWLA 4DV7I 4HYMA 4X66E 3J7AM 4JI0E 2HFUA 4DPTA 4KHPI 5BR8E 1XMQI 3J80C 3Q6NA 3K85A 2BM0A 4GKJI 1HNWE 4JI8E 2DEIA 4LF4E 4DPYA 3F0NA 4DUYE 2UXDE 3V2UC 4DR3I 2Q2EB 4LF9I 4JI2E 4JG4A 2ZM6I 4JV5E 2WW4A 2O1UA 2HK2A 4JI1I 4DR5E 1DARA 2UUBI 1HNZI 4WUDA 1N0VC 1Z0BA 2PNLA 1NHJA 1Y4SA 4LF7I 3T1HE 5FWKA 1HR0E 4I3HA 1HNXI 3HULA 2CGEA 2CG9A 1QZRA 4B3SI 1KTVA 1J5EI 2XEXA 1FI4A 1ELOA 1Y6ZA 1I94E 4DXLA 4DV4I 4Z7YA 4DV6E 3WU5A 5IT9Q 4DU8A 3ZZUA 3B78A 1Y4UA 4JI4I 1N32I 5LMNI 1EI1A 1ZXNA 1B63A 2Z5CB 3P06A 4X66I 2ZBKB 2BV3A 4X64E 4B3TE 5BR8I 5IT9C 4LF8E 3ZKBA 2HHHI 1IBME 2O1VA 1Z0EA 1HNWI 4JI8I 2Z5CA 4LF4I 1IBKE 4JI7I 2X36A 2EFGA 1WUUA 3D4JA 3QT8A 4DUYI 2HKJA 3T1YE 4UTGA 4JI2I 2IOQA 1OJ4A 2V8PA 4USMA 5FLXQ 4JV5I 5A2QQ 4B3ME 2F4VE 3PYFA 4FW9A 2UXBE 1RR9A 4DR5I 4LFCE 1D6TA 1IBLE 4DV3E 4JI3E 4NXME 4DPUA 3ZZ0A 1MX0A 4FWDA 1USVA 2VF3A 2R42A 1HR0I 1Z5BA 2BM1A 3CWVA 4FN5A 1XMOE 4LFBE 3QT5A 3ZKDA 1K47A 1UEKA 5FLXC 3ZM7A 4AQYI 2NPFA 5A2QC 4R1FA 4PRXA 1N36E 4GKKE 4P52A 4DUZE 2UUCE 2OI2A 4DV6I 4IZJB 4ED4A 1Z59A 2V2QA 4LFAI 3PYDA 4YY3E 1VISA 1Z0VA 1N34E 4B3RI 4DV2E 4DV0E 5LMUI 3OTOE 4X64I 4B3TI 3HJCA 2GQ0A 3LPSA 3Q6MA 1PVGA 4DV1E 4DR6E 1IBMI 4FWHA 1H7SA 1B62A 1USUA 2PNMA 2CZ9A 1IBKI 4OX9I 1ZXMA 2R3VA 4DU7A 2V2ZA 2E1RA 3LNUA 1H72C 4X62E 1FWKA 2IOPA 5L3JA 4DV5E 4LF5I 4JI6E 2UU9I 4B3MI 1Z5AA 4DR2E 3WU3A 5IWAE 4WUBA 2HFSA 4K0KE 4KQVA 4JI3I 4NXMI 3PYEA 2UXCI 4X65E 4JYAE 2A2CA 4JI0I 2ZM6E 1RREA 1NZ0A 1HK7A 1FNMA 4JI1E 4FWGA 1XMOI 4LFBI 1KIJA 3Q1QA 4URLA 3GONA 1Z0WA 5GMEA 1S4EA 4GKKI 4DUZI 2UUCI 2UXDI 2ZITA 4DR7E 5LL6R 4UT4A 4MYTA 4MYUA 3K1JA 2V34A 2J7KA 4B3SE 3PRYA 1FJGE 1S16A 4YY3I 1N33E 1N34I 3H4LA 4DV4E 1ZM4A 4DV0I 1ZM9A 3T1HI 2E5LE 2UUAE 3J7AG 3PYGA 2X7IA 2HK3A 4PU9A 3JAMQ 1Z5CA 4DV1I 4DR6I 4JI4E 1ZM3A 4LF6E 1N32E 1KVKA 3LTOA 1I94I 1XNQE 1PIEA 4YHHE 4DR1E 2GS8A 2O1WA 4X62I 4DV5I 1ZM2A 4JI6I 4DR2I 4M1KA 2HHHE 3K17A 5IWAI 2VQFE 4HACB 4K0KI 3JAMC 2LJPA 2VQEE 4JI7E 4IZJA 1H74A 4X65I 4JYAI 2V2VA 1NHHA 4NXNE 1H73A 1XNRE 4WUCA 4HACA 4LF8I 2HKEA 4DR4E 5GMDA 1Z0TA 4XTJA 4IZKB 4DPWA 4DPXA 4ZVIA 3ZZTA 4JI5E 4N3OA 4DV7E 3T1YI 2Z5BB 4DR7I 1NHIA 4EMDA 4KHPE 3B8HA 1XMQE 4IZKA 2AJ4A 2F4VI 4PRVA 2UXBI 4AQYE 4GKJE 4LFCI 1FJGI 3V5RA 1IBLI 4HY1A 4DV3I 3J81Q 1N33I 2Z5BA 2O1TA 3WU4A 4DR3E 2E5LI 4LF9E 2UUAI 1N0UA 3QT6A 4Z7CA 1PKPA 4LFAE 2UUBE 1HNZE 4IZJD 4LF6I 1A6FA 1KKHA 1N36I 4B3RE 4RPFA 4USKA 5LMUE 1XNQI 4LF7E 4P7AA 4YHHI 3J81C 4DR1I 1MU5A 2A2DA 1HNXE 3WU6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1U2R A;  1J5E E;  3M6A A;  2VQF I;  1Z0C A;  3B82 A;  2DEJ A;  2VQE I;  1FKA E;  4OX9 E;  4DV2 I;  4HXZ A;  1EA6 A;  3J80 Q;  3OTO I;  1MG7 A;  4NXN I;  1H7U A;  1XNR I;  4LF5 E;  2UU9 E;  4DR4 I;  5LMN E;  2UXC E;  1BKN A;  1XHK A;  3QT7 A;  4JI5 I;  1Z0G A;  1FWL A;  4DV7 I;  4HYM A;  4X66 E;  3J7A M;  4JI0 E;  2HFU A;  4DPT A;  4KHP I;  5BR8 E;  1XMQ I;  3J80 C;  2BM0 A;  4GKJ I;  1HNW E;  4JI8 E;  2DEI A;  4LF4 E;  4DPY A;  3F0N A;  4DUY E;  2UXD E;  3V2U C;  4DR3 I;  2Q2E B;  4LF9 I;  4JI2 E;  4JG4 A;  2ZM6 I;  4JV5 E;  2WW4 A;  2HK2 A;  4JI1 I;  4DR5 E;  1DAR A;  2UUB I;  1HNZ I;  4WUD A;  1N0V C;  1Z0B A;  1NHJ A;  4LF7 I;  3T1H E;  1HR0 E;  4I3H A;  1HNX I;  3HUL A;  1QZR A;  4B3S I;  1KTV A;  1J5E I;  2XEX A;  1FI4 A;  1ELO A;  1I94 E;  4DXL A;  4DV4 I;  4Z7Y A;  4DV6 E;  3WU5 A;  5IT9 Q;  4DU8 A;  3ZZU A;  3B78 A;  4JI4 I;  1N32 I;  5LMN I;  1EI1 A;  1ZXN A;  1B63 A;  4X66 I;  2ZBK B;  2BV3 A;  4X64 E;  4B3T E;  5BR8 I;  5IT9 C;  4LF8 E;  3ZKB A;  2HHH I;  1IBM E;  1Z0E A;  1HNW I;  4JI8 I;  4LF4 I;  1IBK E;  4JI7 I;  2X36 A;  2EFG A;  1WUU A;  3D4J A;  3QT8 A;  4DUY I;  2HKJ A;  3T1Y E;  4UTG A;  4JI2 I;  1OJ4 A;  2V8P A;  4USM A;  5FLX Q;  4JV5 I;  5A2Q Q;  4B3M E;  2F4V E;  3PYF A;  4FW9 A;  2UXB E;  1RR9 A;  4DR5 I;  4LFC E;  1D6T A;  1IBL E;  4DV3 E;  4JI3 E;  4NXM E;  4DPU A;  3ZZ0 A;  1MX0 A;  4FWD A;  2VF3 A;  2R42 A;  1HR0 I;  1Z5B A;  2BM1 A;  3CWV A;  4FN5 A;  1XMO E;  4LFB E;  3QT5 A;  3ZKD A;  1K47 A;  1UEK A;  5FLX C;  3ZM7 A;  4AQY I;  2NPF A;  5A2Q C;  4R1F A;  4PRX A;  1N36 E;  4GKK E;  4P52 A;  4DUZ E;  2UUC E;  2OI2 A;  4DV6 I;  4ED4 A;  1Z59 A;  2V2Q A;  4LFA I;  3PYD A;  4YY3 E;  1VIS A;  1Z0V A;  1N34 E;  4B3R I;  4DV2 E;  4DV0 E;  5LMU I;  3OTO E;  4X64 I;  4B3T I;  3LPS A;  1PVG A;  4DV1 E;  4DR6 E;  1IBM I;  4FWH A;  1H7S A;  1B62 A;  2CZ9 A;  1IBK I;  4OX9 I;  1ZXM A;  2R3V A;  4DU7 A;  2V2Z A;  2E1R A;  3LNU A;  1H72 C;  4X62 E;  1FWK A;  5L3J A;  4DV5 E;  4LF5 I;  4JI6 E;  2UU9 I;  4B3M I;  1Z5A A;  4DR2 E;  3WU3 A;  5IWA E;  4WUB A;  2HFS A;  4K0K E;  4KQV A;  4JI3 I;  4NXM I;  3PYE A;  2UXC I;  4X65 E;  4JYA E;  2A2C A;  4JI0 I;  2ZM6 E;  1RRE A;  1NZ0 A;  1FNM A;  4JI1 E;  4FWG A;  1XMO I;  4LFB I;  1KIJ A;  3Q1Q A;  4URL A;  3GON A;  1Z0W A;  5GME A;  1S4E A;  4GKK I;  4DUZ I;  2UUC I;  2UXD I;  2ZIT A;  4DR7 E;  5LL6 R;  4UT4 A;  4MYT A;  4MYU A;  3K1J A;  2V34 A;  2J7K A;  4B3S E;  1FJG E;  1S16 A;  4YY3 I;  1N33 E;  1N34 I;  3H4L A;  4DV4 E;  1ZM4 A;  4DV0 I;  1ZM9 A;  3T1H I;  2E5L E;  2UUA E;  3J7A G;  3PYG A;  2X7I A;  2HK3 A;  4PU9 A;  3JAM Q;  1Z5C A;  4DV1 I;  4DR6 I;  4JI4 E;  1ZM3 A;  4LF6 E;  1N32 E;  1KVK A;  3LTO A;  1I94 I;  1XNQ E;  1PIE A;  4YHH E;  4DR1 E;  2GS8 A;  4X62 I;  4DV5 I;  1ZM2 A;  4JI6 I;  4DR2 I;  4M1K A;  2HHH E;  3K17 A;  5IWA I;  2VQF E;  4HAC B;  4K0K I;  3JAM C;  2LJP A;  2VQE E;  4JI7 E;  1H74 A;  4X65 I;  4JYA I;  2V2V A;  1NHH A;  4NXN E;  1H73 A;  1XNR E;  4WUC A;  4HAC A;  4LF8 I;  2HKE A;  4DR4 E;  5GMD A;  1Z0T A;  4XTJ A;  4DPW A;  4DPX A;  4ZVI A;  3ZZT A;  4JI5 E;  4DV7 E;  3T1Y I;  4DR7 I;  1NHI A;  4EMD A;  4KHP E;  3B8H A;  1XMQ E;  2AJ4 A;  2F4V I;  4PRV A;  2UXB I;  4AQY E;  4GKJ E;  4LFC I;  1FJG I;  3V5R A;  1IBL I;  4HY1 A;  4DV3 I;  3J81 Q;  1N33 I;  3WU4 A;  4DR3 E;  2E5L I;  4LF9 E;  2UUA I;  1N0U A;  3QT6 A;  4Z7C A;  1PKP A;  4LFA E;  2UUB E;  1HNZ E;  4LF6 I;  1A6F A;  1KKH A;  1N36 I;  4B3R E;  4RPF A;  4USK A;  5LMU E;  1XNQ I;  4LF7 E;  4P7A A;  4YHH I;  3J81 C;  4DR1 I;  1MU5 A;  2A2D A;  1HNX E;  3WU6 A; 
#chains in the Genus database with same CATH topology
 2PO1 A;  3M7N D;  4U3D A;  1U2R A;  1J5E E;  3M6A A;  2VQF I;  1Z0C A;  2Z5E A;  3B82 A;  4IFD B;  2DEJ A;  2VQE I;  1FKA E;  4OX9 E;  4J3D A;  4DV2 I;  3P3E A;  3P3C A;  4HXZ A;  1EA6 A;  4ISA A;  3J80 Q;  5DRQ A;  1R6L A;  4FW5 A;  1MG7 A;  3OTO I;  4NXN I;  2BR2 B;  1H7U A;  5C0X D;  1XNR I;  4LF5 E;  2UU9 E;  4IFD A;  4DR4 I;  1UDQ A;  4OO1 D;  5LMN E;  2UXC E;  1BKN A;  1XHK A;  3QT7 A;  4JI5 I;  1Z0G A;  1FWL A;  4DV7 I;  4HYM A;  4X66 E;  1YHC A;  3J7A M;  4JI0 E;  2HFU A;  1UDN A;  4DPT A;  4KHP I;  5BR8 E;  2NN6 C;  1XMQ I;  4FW3 A;  3J80 C;  1E3P A;  3Q6N A;  3K85 A;  4OO1 E;  2BM0 A;  4GKJ I;  1HNW E;  5JEA F;  4JI8 E;  2DEI A;  4LF4 E;  4DPY A;  3F0N A;  2NN6 F;  4DUY E;  2UXD E;  3V2U C;  4DR3 I;  1UDS A;  2Q2E B;  4LF9 I;  4JI2 E;  4JG4 A;  2ZM6 I;  4JV5 E;  4MQY A;  2WW4 A;  2O1U A;  2HK2 A;  4JI1 I;  2C37 B;  4DR5 E;  1DAR A;  2UUB I;  1HNZ I;  2GO3 A;  4WUD A;  5DRO A;  1N0V C;  1Z0B A;  2J65 A;  4LCH A;  2PNL A;  1NHJ A;  1Y4S A;  4LF7 I;  3DD6 A;  3PS2 A;  4LCG A;  2BA1 G;  3T1H E;  2IES A;  5FWK A;  1HR0 E;  4I3H A;  5C0X C;  3CDI A;  1HNX I;  3HUL A;  2CGE A;  2CG9 A;  1QZR A;  3U1Y A;  4B3S I;  1KTV A;  2BA1 D;  1J5E I;  2XEX A;  4OO1 C;  3L7Z B;  1FI4 A;  3P3G A;  4AIM A;  1ELO A;  1Y6Z A;  1I94 E;  4DXL A;  4DV4 I;  5C0X F;  4Z7Y A;  4QNJ A;  4DV6 E;  3WU5 A;  5IT9 Q;  2BA0 G;  4NBQ A;  2CVE A;  4DU8 A;  3ZZU A;  1OYS A;  4IS9 A;  3B78 A;  2JEA A;  1Y4U A;  4JI4 I;  2AE8 A;  1N32 I;  5LMN I;  1EI1 A;  2BA0 D;  3NZK A;  1ZXN A;  1B63 A;  5JEA E;  5K36 B;  2Z5C B;  3P06 A;  4X66 I;  2ZBK B;  2BV3 A;  2NN6 E;  4X64 E;  4B3T E;  5BR8 I;  4FW4 A;  5IT9 C;  4LF8 E;  3ZKB A;  2HHH I;  1IBM E;  2O1V A;  4FW7 A;  1Z0E A;  1HNW I;  5K36 A;  4JI8 I;  2Z5C A;  4LF4 I;  1IBK E;  4JI7 I;  2X36 A;  2EFG A;  1WUU A;  3D4J A;  3QT8 A;  4DUY I;  2HKJ A;  3T1Y E;  4UTG A;  4JI2 I;  2IOQ A;  1OJ4 A;  1RHY A;  2V8P A;  4USM A;  5FLX Q;  4JV5 I;  5A2Q Q;  4LPF A;  4B3M E;  3GCM A;  2F4V E;  4GQU A;  3PYF A;  4FW9 A;  2UXB E;  1RR9 A;  4DR5 I;  4LFC E;  1D6T A;  2C38 B;  1IBL E;  4DV3 E;  4JI3 E;  4NXM E;  4DPU A;  4IFD F;  3ZZ0 A;  2BR2 A;  1MX0 A;  4FWD A;  5ELW A;  1USV A;  2VF3 A;  2R42 A;  5JEA C;  4BA2 B;  4BA1 B;  1HR0 I;  5C0X E;  1Z5B A;  2BM1 A;  4MU3 A;  3CWV A;  4MDT A;  2WNR B;  4FN5 A;  4QNK A;  1XMO E;  4LFB E;  3QT5 A;  3ZKD A;  1K47 A;  1UEK A;  5FLX C;  3ZM7 A;  4AQY I;  2NPF A;  5A2Q C;  4R1F A;  4PRX A;  1N36 E;  4GKK E;  2NN6 B;  4P52 A;  4DUZ E;  2UUC E;  4OZE A;  2OI2 A;  4DV6 I;  2WNR A;  4IZJ B;  2C39 B;  4ED4 A;  2IER A;  4LCF A;  1Z59 A;  5K36 D;  2V2Q A;  2F1D A;  4LFA I;  3PYD A;  4YY3 E;  1VIS A;  1Z0V A;  1N34 E;  4B3R I;  4DV2 E;  4DV0 E;  5LMU I;  2C39 A;  3OTO E;  4IFD D;  2C37 A;  4X64 I;  4B3T I;  3HJC A;  2GQ0 A;  3LPS A;  3Q6M A;  4MU1 A;  1PVG A;  4DV1 E;  4DR6 E;  1IBM I;  4FWH A;  1H7S A;  1B62 A;  5C0X B;  1USU A;  2PNM A;  2CZ9 A;  2PO0 B;  1IBK I;  4OX9 I;  3B4T A;  1VI7 A;  1ZXM A;  2R3V A;  4DU7 A;  2V2Z A;  3M85 G;  4IFD E;  3HKM A;  2E1R A;  3LNU A;  1H72 C;  4OO1 B;  4X62 E;  1FWK A;  2IOP A;  5L3J A;  4DV5 E;  4LF5 I;  4JI6 E;  2UU9 I;  4B3M I;  1Z5A A;  4DR2 E;  2VES A;  5DNX A;  3L7Z A;  3WU3 A;  2O3Z A;  5IWA E;  3M85 D;  4WUB A;  2HFS A;  4K0K E;  4KQV A;  4JI3 I;  4NXM I;  3PYE A;  2UXC I;  4OO1 A;  4X65 E;  4JYA E;  2A2C A;  4JI0 I;  2ZM6 E;  1RRE A;  1NZ0 A;  1HK7 A;  2WP8 B;  1FNM A;  4JI1 E;  4FWG A;  1XMO I;  4LFB I;  5K36 C;  1KIJ A;  5DRR A;  4URL A;  3GON A;  3Q1Q A;  4OKG A;  1Z0W A;  5GME A;  2PO1 B;  1S4E A;  4GKK I;  4DUZ I;  2UUC I;  2UXD I;  4AID A;  2WP8 A;  4MU0 A;  2ZIT A;  4AM3 A;  4DR7 E;  4IFD C;  5K36 F;  5LL6 R;  4UT4 A;  4MYT A;  4MYU A;  3H1C A;  3K1J A;  2V34 A;  2J7K A;  4B3S E;  3PRY A;  1FJG E;  1S16 A;  4YY3 I;  1N33 E;  1N34 I;  3H4L A;  4DV4 E;  1ZM4 A;  4DV0 I;  3GLL A;  1ZM9 A;  3T1H I;  2E5L E;  1R6M A;  2UUA E;  3J7A G;  3PYG A;  2X7I A;  2HK3 A;  4LOM A;  4PU9 A;  1OYP A;  1OYR A;  2C38 A;  3JAM Q;  1Z5C A;  4DV1 I;  4DR6 I;  5JEA B;  4JI4 E;  1ZM3 A;  4LF6 E;  1N32 E;  1KVK A;  4BA1 A;  4BA2 A;  3LTO A;  1I94 I;  1XNQ E;  1PIE A;  4YHH E;  4DR1 E;  2GS8 A;  5EL9 A;  2JT2 A;  2O1W A;  4X62 I;  5JEA A;  4DV5 I;  1ZM2 A;  4JI6 I;  4DR2 I;  4M1K A;  2HHH E;  5DNL A;  2NN6 A;  3K17 A;  5IWA I;  4U3B A;  2VQF E;  4HAC B;  4K0K I;  3JAM C;  2LJP A;  2VQE E;  4JI7 E;  4IZJ A;  1H74 A;  4X65 I;  3KRN A;  4JYA I;  2V2V A;  1NHH A;  4NXN E;  1H73 A;  1XNR E;  5K36 E;  4FW6 A;  4WUC A;  4HAC A;  4LF8 I;  2HKE A;  4DR4 E;  2JE6 B;  3PS1 A;  5GMD A;  1Z0T A;  4XTJ A;  4IZK B;  4DPW A;  4DPX A;  5DRP A;  4ZVI A;  2PO2 B;  2JEB B;  3ZZT A;  4JI5 E;  4N3O A;  4MU4 A;  4DV7 E;  3T1Y I;  2Z5B B;  3UHM A;  1NHI A;  4DR7 I;  4EMD A;  4KHP E;  2JE6 A;  3B8H A;  1XMQ E;  4IZK A;  2AJ4 A;  2F4V I;  3CDJ A;  5C0X A;  4PRV A;  2PNZ B;  2UXB I;  2PO0 A;  4AQY E;  4GKJ E;  4LFC I;  1FJG I;  2PO2 A;  3V5R A;  2JEB A;  1E3H A;  1IBL I;  4HY1 A;  4DV3 I;  3J81 Q;  1N33 I;  2Z5B A;  2JEA B;  3PS3 A;  3U1K A;  2O1T A;  3P76 A;  3WU4 A;  4DR3 E;  5JEA D;  2E5L I;  4LF9 E;  2UUA I;  1N0U A;  3GME A;  2PNZ A;  2NN6 D;  4OO1 F;  1Y60 A;  3QT6 A;  4Z7C A;  1PKP A;  4LFA E;  2UUB E;  1HNZ E;  2GO4 A;  4IZJ D;  4LF6 I;  1A6F A;  1KKH A;  1N36 I;  1P42 A;  4B3R E;  4RPF A;  4USK A;  5LMU E;  1XNQ I;  4LF7 E;  3M7N G;  4P7A A;  4YHH I;  3J81 C;  4DR1 I;  5EKW A;  1YH8 A;  1MU5 A;  1UDO A;  2A2D A;  1HNX E;  1Y5Y A;  1XXE A;  3WU6 A; 
#chains in the Genus database with same CATH homology
 1U2R A;  1J5E E;  3M6A A;  2VQF I;  1Z0C A;  2Z5E A;  3B82 A;  2DEJ A;  2VQE I;  1FKA E;  4OX9 E;  4DV2 I;  4HXZ A;  1EA6 A;  3J80 Q;  3OTO I;  1MG7 A;  4NXN I;  1H7U A;  1XNR I;  4LF5 E;  2UU9 E;  4DR4 I;  5LMN E;  2UXC E;  1BKN A;  1XHK A;  3QT7 A;  4JI5 I;  1Z0G A;  1FWL A;  4DV7 I;  4HYM A;  4X66 E;  3J7A M;  4JI0 E;  2HFU A;  4DPT A;  4KHP I;  5BR8 E;  1XMQ I;  3J80 C;  3Q6N A;  3K85 A;  2BM0 A;  4GKJ I;  1HNW E;  4JI8 E;  2DEI A;  4LF4 E;  4DPY A;  3F0N A;  4DUY E;  2UXD E;  3V2U C;  4DR3 I;  2Q2E B;  4LF9 I;  4JI2 E;  4JG4 A;  2ZM6 I;  4JV5 E;  2WW4 A;  2O1U A;  2HK2 A;  4JI1 I;  4DR5 E;  1DAR A;  2UUB I;  1HNZ I;  4WUD A;  1N0V C;  1Z0B A;  2PNL A;  1NHJ A;  1Y4S A;  4LF7 I;  3T1H E;  5FWK A;  1HR0 E;  4I3H A;  1HNX I;  3HUL A;  2CGE A;  2CG9 A;  1QZR A;  4B3S I;  1KTV A;  1J5E I;  2XEX A;  1FI4 A;  1ELO A;  1Y6Z A;  1I94 E;  4DXL A;  4DV4 I;  4Z7Y A;  4DV6 E;  3WU5 A;  5IT9 Q;  4DU8 A;  3ZZU A;  3B78 A;  1Y4U A;  4JI4 I;  1N32 I;  5LMN I;  1EI1 A;  1ZXN A;  1B63 A;  2Z5C B;  3P06 A;  4X66 I;  2ZBK B;  2BV3 A;  4X64 E;  4B3T E;  5BR8 I;  5IT9 C;  4LF8 E;  3ZKB A;  2HHH I;  1IBM E;  2O1V A;  1Z0E A;  1HNW I;  4JI8 I;  2Z5C A;  4LF4 I;  1IBK E;  4JI7 I;  2X36 A;  2EFG A;  1WUU A;  3D4J A;  3QT8 A;  4DUY I;  2HKJ A;  3T1Y E;  4UTG A;  4JI2 I;  2IOQ A;  1OJ4 A;  2V8P A;  4USM A;  5FLX Q;  4JV5 I;  5A2Q Q;  4B3M E;  2F4V E;  3PYF A;  4FW9 A;  2UXB E;  1RR9 A;  4DR5 I;  4LFC E;  1D6T A;  1IBL E;  4DV3 E;  4JI3 E;  4NXM E;  4DPU A;  3ZZ0 A;  1MX0 A;  4FWD A;  1USV A;  2VF3 A;  2R42 A;  1HR0 I;  1Z5B A;  2BM1 A;  3CWV A;  4FN5 A;  1XMO E;  4LFB E;  3QT5 A;  3ZKD A;  1K47 A;  1UEK A;  5FLX C;  3ZM7 A;  4AQY I;  2NPF A;  5A2Q C;  4R1F A;  4PRX A;  1N36 E;  4GKK E;  4P52 A;  4DUZ E;  2UUC E;  2OI2 A;  4DV6 I;  4IZJ B;  4ED4 A;  1Z59 A;  2V2Q A;  4LFA I;  3PYD A;  4YY3 E;  1VIS A;  1Z0V A;  1N34 E;  4B3R I;  4DV2 E;  4DV0 E;  5LMU I;  3OTO E;  4X64 I;  4B3T I;  3HJC A;  2GQ0 A;  3LPS A;  3Q6M A;  1PVG A;  4DV1 E;  4DR6 E;  1IBM I;  4FWH A;  1H7S A;  1B62 A;  1USU A;  2PNM A;  2CZ9 A;  1IBK I;  4OX9 I;  1ZXM A;  2R3V A;  4DU7 A;  2V2Z A;  2E1R A;  3LNU A;  1H72 C;  4X62 E;  1FWK A;  2IOP A;  5L3J A;  4DV5 E;  4LF5 I;  4JI6 E;  2UU9 I;  4B3M I;  1Z5A A;  4DR2 E;  3WU3 A;  5IWA E;  4WUB A;  2HFS A;  4K0K E;  4KQV A;  4JI3 I;  4NXM I;  3PYE A;  2UXC I;  4X65 E;  4JYA E;  2A2C A;  4JI0 I;  2ZM6 E;  1RRE A;  1NZ0 A;  1HK7 A;  1FNM A;  4JI1 E;  4FWG A;  1XMO I;  4LFB I;  1KIJ A;  3Q1Q A;  4URL A;  3GON A;  1Z0W A;  5GME A;  1S4E A;  4GKK I;  4DUZ I;  2UUC I;  2UXD I;  2ZIT A;  4DR7 E;  5LL6 R;  4UT4 A;  4MYT A;  4MYU A;  3K1J A;  2V34 A;  2J7K A;  4B3S E;  3PRY A;  1FJG E;  1S16 A;  4YY3 I;  1N33 E;  1N34 I;  3H4L A;  4DV4 E;  1ZM4 A;  4DV0 I;  1ZM9 A;  3T1H I;  2E5L E;  2UUA E;  3J7A G;  3PYG A;  2X7I A;  2HK3 A;  4PU9 A;  3JAM Q;  1Z5C A;  4DV1 I;  4DR6 I;  4JI4 E;  1ZM3 A;  4LF6 E;  1N32 E;  1KVK A;  3LTO A;  1I94 I;  1XNQ E;  1PIE A;  4YHH E;  4DR1 E;  2GS8 A;  2O1W A;  4X62 I;  4DV5 I;  1ZM2 A;  4JI6 I;  4DR2 I;  4M1K A;  2HHH E;  3K17 A;  5IWA I;  2VQF E;  4HAC B;  4K0K I;  3JAM C;  2LJP A;  2VQE E;  4JI7 E;  4IZJ A;  1H74 A;  4X65 I;  4JYA I;  2V2V A;  1NHH A;  4NXN E;  1H73 A;  1XNR E;  4WUC A;  4HAC A;  4LF8 I;  2HKE A;  4DR4 E;  5GMD A;  1Z0T A;  4XTJ A;  4IZK B;  4DPW A;  4DPX A;  4ZVI A;  3ZZT A;  4JI5 E;  4N3O A;  4DV7 E;  3T1Y I;  2Z5B B;  4DR7 I;  1NHI A;  4EMD A;  4KHP E;  3B8H A;  1XMQ E;  4IZK A;  2AJ4 A;  2F4V I;  4PRV A;  2UXB I;  4AQY E;  4GKJ E;  4LFC I;  1FJG I;  3V5R A;  1IBL I;  4HY1 A;  4DV3 I;  3J81 Q;  1N33 I;  2Z5B A;  2O1T A;  3WU4 A;  4DR3 E;  2E5L I;  4LF9 E;  2UUA I;  1N0U A;  3QT6 A;  4Z7C A;  1PKP A;  4LFA E;  2UUB E;  1HNZ E;  4IZJ D;  4LF6 I;  1A6F A;  1KKH A;  1N36 I;  4B3R E;  4RPF A;  4USK A;  5LMU E;  1XNQ I;  4LF7 E;  4P7A A;  4YHH I;  3J81 C;  4DR1 I;  1MU5 A;  2A2D A;  1HNX E;  3WU6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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