5ELWA

A. thaliana igpd2 in complex with the triazole-phosphonate inhibitor, (r)-c348, to 1.36a resolution
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
199
structure length
199
Chain Sequence
SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Imidazoleglycerol-phosphate dehydratase 2, chloroplastic
publication title Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Lyase
total genus 65
structure length 199
sequence length 199
ec nomenclature ec 4.2.1.19: Imidazoleglycerol-phosphate dehydratase.
pdb deposition date 2015-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00475 IGPD Imidazoleglycerol-phosphate dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA01
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA02
1RHYA 5ELWA 4MU3A 4LOMA 2AE8A 4MU4A 4LPFA 4MU0A 4MU1A 4QNKA 5DNLA 4QNJA 5DNXA 5EL9A 5EKWA 4GQUA 2F1DA
chains in the Genus database with same CATH superfamily
1ZM3A 4DR7I 2AE8A 1Z0CA 3UHMA 2Z5EA 3F0NA 4DR4E 2ZITA 1HR0I 5JEAD 1Z5AA 2V34A 1MU5A 4ED4A 4KHPE 4LFBI 1NHHA 1Z0BA 4JI3E 2UXBI 1UDOA 2BA1D 4URLA 3T1HI 1N33E 2UUCI 2NN6F 2EFGA 3P3EA 2F1DA 4DV7E 1KKHA 3QT7A 1XMQI 2BA0D 4YHHE 4FW6A 4OO1F 4BA1B 2CVEA 3J7AG 2PNZA 4DUYI 4DR2I 4DV6I 3LTOA 1XXEA 1XMOI 2GO3A 2JE6B 5JEAF 4ISAA 4ZVIA 4JI3I 5BR8E 2AJ4A 5FLXQ 3PYEA 4DUZE 3CDJA 4BA1A 4IFDD 4Z7CA 4OO1B 5LMNE 1KVKA 1XNQI 4IZJD 1HNZI 1U2RA 2GQ0A 2UU9I 2PO2B 4FW5A 4PRXA 2NN6A 4JI1E 3PS2A 4JYAI 3CDIA 4XTJA 4X65I 4OO1A 4LOMA 1EI1A 2VQEE 2PO2A 5K36E 1WUUA 2Z5CB 4BA2B 4IFDF 3L7ZA 2C39B 5JEAA 3QT5A 2VESA 5C0XB 2NPFA 2HKJA 4DR6E 4GKJE 4HACB 4B3RE 4WUCA 3DD6A 4LF7I 4NXMI 3K17A 1YH8A 1IBMI 1OYSA 2Z5CA 4IZKA 5DRPA 1Z59A 4DV4I 3P3CA 4I3HA 4LF5E 2HFSA 4KQVA 5IWAE 1BKNA 2VQEI 2UUBE 1P42A 4MYTA 1Y60A 1B63A 4JI4E 4B3SI 3T1YI 4HACA 4EMDA 1UEKA 4LF8E 2V2VA 2IERA 4X62E 4IS9A 3LNUA 1N32E 1J5EE 4DR7E 1PIEA 4X64E 2OI2A 2UXCI 1EA6A 1XNRI 4PU9A 1FJGI 4IZJA 5EKWA 1HNXI 4LF5I 1HR0E 3WU4A 5C0XC 2ZM6E 3OTOI 4LFBE 1FKAE 2IOPA 1R6LA 2UXBE 1UDQA 4LF8I 4JI0I 2UUCE 2JEBB 4FW4A 4OO1D 1USVA 1N32I 1J5EI 2V8PA 4LFAI 1VISA 4X64I 3M7NG 3ZM7A 3QT8A 4DUYE 4DV1I 4DV6E 4DR2E 1ZM4A 3HKMA 1N0UA 4YY3E 1XMOE 4HY1A 4USKA 5FLXC 4P7AA 2BM1A 1FWKA 4MYUA 4LF6I 3V5RA 2NN6E 2JEBA 4OKGA 2ZM6I 4LPFA 3Q1QA 4LCGA 1ELOA 1OYRA 4B3MI 2HK2A 4MU3A 4OO1E 1IBLE 1XNQE 3B82A 1HNZE 5GMDA 1OYPA 2WNRB 4WUDA 5K36C 4HYMA 4FW3A 4MU0A 2UU9E 1S4EA 3PYDA 5FWKA 1QZRA 4DV0I 5C0XD 2BM0A 4MDTA 3ZKDA 4YY3I 5JEAE 3ZZ0A 4JYAE 4DU8A 2Z5BB 4X65E 2UUAI 2R3VA 2JEAB 4FN5A 1IBKI 4AQYI 1DARA 2WNRA 2PO0B 2IOQA 2HFUA 1IBLI 4DXLA 1MX0A 4QNJA 4GQUA 2X36A 1NHJA 4DV3I 1Z0EA 1N34I 2DEIA 2JE6A 2JEAA 4DR5I 3U1KA 1UDSA 3M7ND 4JG4A 2Q2EB 4FW9A 4DV2I 1Y5YA 5C0XF 2CG9A 5DNLA 2UXDI 4LF7E 4Z7YA 1H74A 4NXME 3CWVA 1IBME 4DR1I 1RREA 3P76A 4DV4E 4IFDE 1HK7A 4JI2I 4U3BA 2VQFI 3PRYA 4B3SE 4B3TE 3T1YE 5L3JA 5ELWA 2BR2B 2A2DA 2C38B 4JI8I 3KRNA 3V2UC 1N36E 1ZXMA 1R6MA 5DRQA 3WU6A 5A2QQ 4HXZA 1E3PA 3J80Q 4LCFA 2UXCE 3Q6NA 1Z0GA 1XNRE 1FJGE 4BA2A 2C39A 3M85G 1HNXE 4DPXA 3ZZTA 2R42A 3QT6A 4FW7A 4AIDA 2HHHI 2BV3A 4X66I 4UT4A 5C0XA 3J81Q 5IT9C 2C37B 3OTOE 4AM3A 4JI5E 4B3TI 3HULA 4MU4A 3H1CA 3JAMQ 4JI0E 1A6FA 3PYGA 3J7AM 1Z5BA 3WU5A 4DR3E 1N36I 4NBQA 1KIJA 1ZXNA 4LFAE 1H72C 4DV1E 4USMA 1MG7A 5K36B 2F4VE 2WP8B 4LCHA 4LF6E 1Z0TA 5JEAC 4JI5I 4JI6I 4B3ME 5IT9Q 3GONA 1Z0WA 1FNMA 4DR3I 2PO1B 4GKKE 1H7UA 5K36A 2LJPA 2WP8A 1HNWI 1VI7A 1YHCA 3B4TA 2PNMA 1K47A 4DV0E 5EL9A 4M1KA 4DPUA 2F4VI 3P06A 3M85D 2UUAE 3K85A 2HK3A 3ZKBA 2PNLA 2WW4A 5GMEA 1IBKE 1UDNA 4AQYE 1H73A 2JT2A 1USUA 2A2CA 3GMEA 5DRRA 2E5LI 5LMUE 4GKKI 4IFDC 2ZBKB 1FI4A 4DV3E 4LF4E 1N34E 1PVGA 4DR5E 3PS3A 2PNZB 4DV2E 2V2QA 4K0KI 4NXNI 4DPTA 3NZKA 2UXDE 1NZ0A 3H4LA 3WU3A 4DR1E 3PYFA 4RPFA 2O1VA 4FWGA 4JI2E 5LMUI 2O1UA 2IESA 2VQFE 3U1YA 2HKEA 1N0VC 4DR4I 4LF4I 2Z5BA 4JI7E 2V2ZA 3ZZUA 5A2QC 5C0XE 3J80C 3D4JA 2X7IA 4JI8E 4UTGA 4KHPI 2NN6B 2O1TA 1N33I 4DPYA 2PO0A 3B78A 4DV7I 3J81C 1FWLA 5K36D 2CZ9A 3JAMC 4YHHI 3PS1A 4FWDA 5DNXA 2HHHE 1I94E 4X66E 2J7KA 3B8HA 2CGEA 5DROA 4LFCE 4JI7I 4P52A 3L7ZB 4MQYA 2VF3A 5JEAB 2GO4A 2J65A 5BR8I 4QNKA 1PKPA 4DUZI 3Q6MA 1D6TA 1RR9A 2O1WA 1H7SA 5LMNI 3LPSA 4IZKB 1RHYA 3P3GA 4LF9E 3GCMA 1I94I 2BR2A 2C38A 1KTVA 5K36F 1Y6ZA 4LFCI 4U3DA 4JI6E 4JI1I 2NN6C 2E1RA 2DEJA 1OJ4A 2GS8A 1B62A 1Y4SA 3GLLA 4OO1C 1Z5CA 4DV5E 4R1FA 1HNWE 1NHIA 3K1JA 4IFDB 2C37A 2BA1G 1E3HA 4IZJB 4LF9I 4OX9E 1S16A 2XEXA 2BA0G 4MU1A 4AIMA 4DU7A 3M6AA 4OZEA 1Z0VA 4DR6I 1ZM9A 4GKJI 4JV5E 4N3OA 4B3RI 2E5LE 4IFDA 4J3DA 4DV5I 4DPWA 5IWAI 2UUBI 1XHKA 1Y4UA 2NN6D 5LL6R 3HJCA 4WUBA 4PRVA 4JI4I 4OX9I 4NXNE 4K0KE 2PO1A 2O3ZA 3T1HE 1ZM2A 4X62I 4JV5I 4FWHA 1XMQE
chains in the Genus database with same CATH topology
1RHYA 5ELWA 4MU3A 4LOMA 2AE8A 4MU4A 4LPFA 4MU0A 4MU1A 4QNKA 5DNLA 4QNJA 5DNXA 5EL9A 5EKWA 4GQUA 2F1DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1RHY A;  5ELW A;  4MU3 A;  4LOM A;  2AE8 A;  4MU4 A;  4LPF A;  4MU0 A;  4MU1 A;  4QNK A;  5DNL A;  4QNJ A;  5DNX A;  5EL9 A;  5EKW A;  4GQU A;  2F1D A; 
#chains in the Genus database with same CATH topology
 1ZM3 A;  4DR7 I;  2AE8 A;  1Z0C A;  3UHM A;  2Z5E A;  3F0N A;  4DR4 E;  2ZIT A;  1HR0 I;  5JEA D;  1Z5A A;  2V34 A;  1MU5 A;  4ED4 A;  4KHP E;  4LFB I;  1NHH A;  1Z0B A;  4JI3 E;  2UXB I;  1UDO A;  2BA1 D;  4URL A;  3T1H I;  1N33 E;  2UUC I;  2NN6 F;  2EFG A;  3P3E A;  2F1D A;  4DV7 E;  1KKH A;  3QT7 A;  1XMQ I;  2BA0 D;  4YHH E;  4FW6 A;  4OO1 F;  4BA1 B;  2CVE A;  3J7A G;  2PNZ A;  4DUY I;  4DR2 I;  4DV6 I;  3LTO A;  1XXE A;  1XMO I;  2GO3 A;  2JE6 B;  5JEA F;  4ISA A;  4ZVI A;  4JI3 I;  5BR8 E;  2AJ4 A;  5FLX Q;  3PYE A;  4DUZ E;  3CDJ A;  4BA1 A;  4IFD D;  4Z7C A;  4OO1 B;  5LMN E;  1KVK A;  1XNQ I;  4IZJ D;  1HNZ I;  1U2R A;  2GQ0 A;  2UU9 I;  2PO2 B;  4FW5 A;  4PRX A;  2NN6 A;  4JI1 E;  3PS2 A;  4JYA I;  3CDI A;  4XTJ A;  4X65 I;  4OO1 A;  4LOM A;  1EI1 A;  2VQE E;  2PO2 A;  5K36 E;  1WUU A;  2Z5C B;  4BA2 B;  4IFD F;  3L7Z A;  2C39 B;  5JEA A;  3QT5 A;  2VES A;  5C0X B;  2NPF A;  2HKJ A;  4DR6 E;  4GKJ E;  4HAC B;  4B3R E;  4WUC A;  3DD6 A;  4LF7 I;  4NXM I;  3K17 A;  1YH8 A;  1IBM I;  1OYS A;  2Z5C A;  4IZK A;  5DRP A;  1Z59 A;  4DV4 I;  3P3C A;  4I3H A;  4LF5 E;  2HFS A;  4KQV A;  5IWA E;  1BKN A;  2VQE I;  2UUB E;  1P42 A;  4MYT A;  1Y60 A;  1B63 A;  4JI4 E;  4B3S I;  3T1Y I;  4HAC A;  4EMD A;  1UEK A;  4LF8 E;  2V2V A;  2IER A;  4X62 E;  4IS9 A;  3LNU A;  1N32 E;  1J5E E;  4DR7 E;  1PIE A;  4X64 E;  2OI2 A;  2UXC I;  1EA6 A;  1XNR I;  4PU9 A;  1FJG I;  4IZJ A;  5EKW A;  1HNX I;  4LF5 I;  1HR0 E;  3WU4 A;  5C0X C;  2ZM6 E;  3OTO I;  4LFB E;  1FKA E;  2IOP A;  1R6L A;  2UXB E;  1UDQ A;  4LF8 I;  4JI0 I;  2UUC E;  2JEB B;  4FW4 A;  4OO1 D;  1USV A;  1N32 I;  1J5E I;  2V8P A;  4LFA I;  1VIS A;  4X64 I;  3M7N G;  3ZM7 A;  3QT8 A;  4DUY E;  4DV1 I;  4DV6 E;  4DR2 E;  1ZM4 A;  3HKM A;  1N0U A;  4YY3 E;  1XMO E;  4HY1 A;  4USK A;  5FLX C;  4P7A A;  2BM1 A;  1FWK A;  4MYU A;  4LF6 I;  3V5R A;  2NN6 E;  2JEB A;  4OKG A;  2ZM6 I;  4LPF A;  3Q1Q A;  4LCG A;  1ELO A;  1OYR A;  4B3M I;  2HK2 A;  4MU3 A;  4OO1 E;  1IBL E;  1XNQ E;  3B82 A;  1HNZ E;  5GMD A;  1OYP A;  2WNR B;  4WUD A;  5K36 C;  4HYM A;  4FW3 A;  4MU0 A;  2UU9 E;  1S4E A;  3PYD A;  5FWK A;  1QZR A;  4DV0 I;  5C0X D;  2BM0 A;  4MDT A;  3ZKD A;  4YY3 I;  5JEA E;  3ZZ0 A;  4JYA E;  4DU8 A;  2Z5B B;  4X65 E;  2UUA I;  2R3V A;  2JEA B;  4FN5 A;  1IBK I;  4AQY I;  1DAR A;  2WNR A;  2PO0 B;  2IOQ A;  2HFU A;  1IBL I;  4DXL A;  1MX0 A;  4QNJ A;  4GQU A;  2X36 A;  1NHJ A;  4DV3 I;  1Z0E A;  1N34 I;  2DEI A;  2JE6 A;  2JEA A;  4DR5 I;  3U1K A;  1UDS A;  3M7N D;  4JG4 A;  2Q2E B;  4FW9 A;  4DV2 I;  1Y5Y A;  5C0X F;  2CG9 A;  5DNL A;  2UXD I;  4LF7 E;  4Z7Y A;  1H74 A;  4NXM E;  3CWV A;  1IBM E;  4DR1 I;  1RRE A;  3P76 A;  4DV4 E;  4IFD E;  1HK7 A;  4JI2 I;  4U3B A;  2VQF I;  3PRY A;  4B3S E;  4B3T E;  3T1Y E;  5L3J A;  5ELW A;  2BR2 B;  2A2D A;  2C38 B;  4JI8 I;  3KRN A;  3V2U C;  1N36 E;  1ZXM A;  1R6M A;  5DRQ A;  3WU6 A;  5A2Q Q;  4HXZ A;  1E3P A;  3J80 Q;  4LCF A;  2UXC E;  3Q6N A;  1Z0G A;  1XNR E;  1FJG E;  4BA2 A;  2C39 A;  3M85 G;  1HNX E;  4DPX A;  3ZZT A;  2R42 A;  3QT6 A;  4FW7 A;  4AID A;  2HHH I;  2BV3 A;  4X66 I;  4UT4 A;  5C0X A;  3J81 Q;  5IT9 C;  2C37 B;  3OTO E;  4AM3 A;  4JI5 E;  4B3T I;  3HUL A;  4MU4 A;  3H1C A;  3JAM Q;  4JI0 E;  1A6F A;  3PYG A;  3J7A M;  1Z5B A;  3WU5 A;  4DR3 E;  1N36 I;  4NBQ A;  1KIJ A;  1ZXN A;  4LFA E;  1H72 C;  4DV1 E;  4USM A;  1MG7 A;  5K36 B;  2F4V E;  2WP8 B;  4LCH A;  4LF6 E;  1Z0T A;  5JEA C;  4JI5 I;  4JI6 I;  4B3M E;  5IT9 Q;  3GON A;  1Z0W A;  1FNM A;  4DR3 I;  2PO1 B;  4GKK E;  1H7U A;  5K36 A;  2LJP A;  2WP8 A;  1HNW I;  1VI7 A;  1YHC A;  3B4T A;  2PNM A;  1K47 A;  4DV0 E;  5EL9 A;  4M1K A;  4DPU A;  2F4V I;  3P06 A;  3M85 D;  2UUA E;  3K85 A;  2HK3 A;  3ZKB A;  2PNL A;  2WW4 A;  5GME A;  1IBK E;  1UDN A;  4AQY E;  1H73 A;  2JT2 A;  1USU A;  2A2C A;  3GME A;  5DRR A;  2E5L I;  5LMU E;  4GKK I;  4IFD C;  2ZBK B;  1FI4 A;  4DV3 E;  4LF4 E;  1N34 E;  1PVG A;  4DR5 E;  3PS3 A;  2PNZ B;  4DV2 E;  2V2Q A;  4K0K I;  4NXN I;  4DPT A;  3NZK A;  2UXD E;  1NZ0 A;  3H4L A;  3WU3 A;  4DR1 E;  3PYF A;  4RPF A;  2O1V A;  4FWG A;  4JI2 E;  5LMU I;  2O1U A;  2IES A;  2VQF E;  3U1Y A;  2HKE A;  1N0V C;  4DR4 I;  4LF4 I;  2Z5B A;  4JI7 E;  2V2Z A;  3ZZU A;  5A2Q C;  5C0X E;  3J80 C;  3D4J A;  2X7I A;  4JI8 E;  4UTG A;  4KHP I;  2NN6 B;  2O1T A;  1N33 I;  4DPY A;  2PO0 A;  3B78 A;  4DV7 I;  3J81 C;  1FWL A;  5K36 D;  2CZ9 A;  3JAM C;  4YHH I;  3PS1 A;  4FWD A;  5DNX A;  2HHH E;  1I94 E;  4X66 E;  2J7K A;  3B8H A;  2CGE A;  5DRO A;  4LFC E;  4JI7 I;  4P52 A;  3L7Z B;  4MQY A;  2VF3 A;  5JEA B;  2GO4 A;  2J65 A;  5BR8 I;  4QNK A;  1PKP A;  4DUZ I;  3Q6M A;  1D6T A;  1RR9 A;  2O1W A;  1H7S A;  5LMN I;  3LPS A;  4IZK B;  1RHY A;  3P3G A;  4LF9 E;  3GCM A;  1I94 I;  2BR2 A;  2C38 A;  1KTV A;  5K36 F;  1Y6Z A;  4LFC I;  4U3D A;  4JI6 E;  4JI1 I;  2NN6 C;  2E1R A;  2DEJ A;  1OJ4 A;  2GS8 A;  1B62 A;  1Y4S A;  3GLL A;  4OO1 C;  1Z5C A;  4DV5 E;  4R1F A;  1HNW E;  1NHI A;  3K1J A;  4IFD B;  2C37 A;  2BA1 G;  1E3H A;  4IZJ B;  4LF9 I;  4OX9 E;  1S16 A;  2XEX A;  2BA0 G;  4MU1 A;  4AIM A;  4DU7 A;  3M6A A;  4OZE A;  1Z0V A;  4DR6 I;  1ZM9 A;  4GKJ I;  4JV5 E;  4N3O A;  4B3R I;  2E5L E;  4IFD A;  4J3D A;  4DV5 I;  4DPW A;  5IWA I;  2UUB I;  1XHK A;  1Y4U A;  2NN6 D;  5LL6 R;  3HJC A;  4WUB A;  4PRV A;  4JI4 I;  4OX9 I;  4NXN E;  4K0K E;  2PO1 A;  2O3Z A;  3T1H E;  1ZM2 A;  4X62 I;  4JV5 I;  4FWH A;  1XMQ E; 
#chains in the Genus database with same CATH homology
 1RHY A;  5ELW A;  4MU3 A;  4LOM A;  2AE8 A;  4MU4 A;  4LPF A;  4MU0 A;  4MU1 A;  4QNK A;  5DNL A;  4QNJ A;  5DNX A;  5EL9 A;  5EKW A;  4GQU A;  2F1D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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