5ELWA

A. thaliana igpd2 in complex with the triazole-phosphonate inhibitor, (r)-c348, to 1.36a resolution
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
199
structure length
199
Chain Sequence
SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords Imidazoleglycerol-phosphate dehydratase 2, chloroplastic
publication title Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 65
structure length 199
sequence length 199
ec nomenclature ec 4.2.1.19: Imidazoleglycerol-phosphate dehydratase.
pdb deposition date 2015-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00475 IGPD Imidazoleglycerol-phosphate dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA01
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA02
2F1DA 5EKWA 5DNLA 4MU0A 4QNKA 4LOMA 4LPFA 5DNXA 5EL9A 4MU4A 5ELWA 4GQUA 4MU3A 4QNJA 4MU1A 2AE8A 1RHYA
chains in the Genus database with same CATH superfamily
1Z0CA 4LFCI 4DPYA 3P76A 4JI4I 4JI6E 4LF9E 1Z0VA 2V2VA 4K0KI 3M85D 4BA1B 4FWDA 4AQYE 2BM0A 5GMDA 1NZ0A 1K47A 1Z5BA 1YH8A 4MU1A 4B3MI 3PS3A 2PNZA 2J65A 2C38B 3B8HA 4JI0I 2C39B 5JEAB 4URLA 4HY1A 4DV2E 3U1YA 2VESA 5K36F 5EKWA 4BA2B 1XNQE 2IESA 4OZEA 4DU7A 4LFBI 2NN6D 1J5EE 4X65I 4DV1I 5C0XB 3GLLA 4DXLA 3F0NA 1XMQI 2J7KA 2V34A 3QT7A 4FW3A 4GKJI 4B3RI 3CDIA 2BV3A 1Z5CA 2O1WA 2UU9I 1VISA 4JI7E 3ZM7A 4X64E 4JI6I 4LF9I 4DV4E 2CGEA 1Y6ZA 1ZM4A 4NXNE 2HKEA 1B62A 4AQYI 4LF7E 2PO1A 1R6LA 2PNZB 3P06A 1H72C 2R3VA 5JEAC 3CDJA 4LF8E 4P7AA 4USKA 4OO1A 1ZXNA 4LCFA 4DV2I 1UDSA 2AE8A 2A2CA 4IZKA 4IZJA 4JI5E 3K1JA 2DEJA 5IWAE 2F1DA 3PYGA 3GONA 4LOMA 4LPFA 4JV5E 3GMEA 1ELOA 4MU4A 1J5EI 1DARA 1USVA 3PRYA 2PO2A 3QT5A 4AIDA 1ZXMA 2AJ4A 2V2ZA 4X62E 3CWVA 2E5LE 4QNKA 4JI7I 1UDQA 2PO0A 2BA1D 4X64I 4DV4I 3KRNA 3J81C 1P42A 1Y4UA 3HKMA 4LCGA 4NXNI 4JI3E 1KKHA 3B78A 3HJCA 4DR2E 4IFDE 1ZM9A 2HK2A 4FW7A 3ZZTA 4LF7I 2PO1B 5FLXQ 3H4LA 3P3CA 1OJ4A 4I3HA 1OYPA 4LF8I 4OO1B 2JEAA 1ZM2A 5DRPA 4UT4A 3LNUA 2DEIA 4IZKB 4IZJB 4PRVA 3M6AA 5A2QQ 1PKPA 4JI5I 2IOQA 2BR2B 5IWAI 2GS8A 4WUBA 4GKKE 2BA0G 4JV5I 4MQYA 2Z5EA 1FWLA 4HYMA 1MX0A 2PO2B 4FN5A 1XXEA 4XTJA 4X62I 3WU3A 3DD6A 3JAMQ 2LJPA 1IBME 2JT2A 4JI1E 4EMDA 2E5LI 4LF6E 5JEAE 2PO0B 2GO3A 5JEAD 4DPTA 1FWKA 1IBLE 4YY3E 1BKNA 2NN6A 1PIEA 1Z0EA 2XEXA 3L7ZA 4JI3I 1N34E 1KVKA 5L3JA 4DR2I 2Z5CA 2VF3A 5DRRA 5C0XE 4DR4E 1Z5AA 1N0UA 4IFDC 2A2DA 4LCHA 4FW5A 5IT9Q 4FW6A 1HK7A 2JEAB 4JG4A 4DPWA 4KHPE 2X7IA 1S16A 3ZKDA 4DV3E 4X66E 3J80C 4MYUA 2Z5BA 2Q2EB 1FNMA 2UXCE 4DPUA 3D4JA 1H74A 3H1CA 1FJGE 4DV5E 1RHYA 5FWKA 5K36A 5EL9A 3QT6A 1NHHA 4LFAE 4DR1E 1N33E 1IBMI 1B63A 5DNLA 4JI1I 4DR5E 4LF6I 4JYAE 1S4EA 1IBLI 2NN6B 4YY3I 4DUZE 3L7ZB 4B3TE 2WP8A 1N34I 4IFDF 2Z5CB 4Z7CA 2O1TA 2OI2A 3JAMC 2GO4A 4DR4I 2IERA 5C0XC 4LF5E 2F4VE 1XNQI 2BR2A 1E3HA 3LPSA 1RREA 4KHPI 2X36A 1MG7A 4MU0A 3B82A 4R1FA 4DV3I 4MDTA 2CG9A 4DR7E 1VI7A 4J3DA 4X66I 4ISAA 2Z5BB 3ZZ0A 2PNLA 2VQEE 4FWGA 3J7AM 2UXCI 2C37A 3Q6NA 3P3GA 3GCMA 1FJGI 4DV5I 4N3OA 2ZM6E 1HNWE 5K36B 1EA6A 2HK3A 3PS2A 2IOPA 4IS9A 2NPFA 1H73A 5JEAF 4DV7E 3K17A 4LFAI 4OX9E 4OO1E 4DR1I 2O1UA 1N33I 1NHJA 4DR5I 4JYAI 2UUCE 1IBKE 4IFDD 1PVGA 4DUZI 2WP8B 4B3TI 4NBQA 1H7SA 1Z0BA 5C0XF 1HNXE 3U1KA 3WU6A 3V2UC 4FWHA 1USUA 1MU5A 4HACB 3M85G 4LF5I 2UUAE 4MYTA 5LMNE 2ZITA 1RR9A 2UUBE 4DR7I 1R6MA 5DRQA 1Z0GA 4UTGA 1I94E 2C37B 2VQEI 4FW9A 5K36C 2JE6A 5DNXA 4JI8E 5GMEA 4U3BA 2ZM6I 1HNWI 1KIJA 4RPFA 3T1YE 4ED4A 4WUCA 4DV7I 4OX9I 4GQUA 3M7NG 3PYFA 1NHIA 2E1RA 2UUCI 5DROA 4OO1C 1N36E 1IBKI 2O3ZA 5C0XD 2CVEA 1Z0TA 3Q6MA 4DUYE 1UDNA 4DV6E 1HNXI 1XNRE 4AIMA 2BA0D 3V5RA 4AM3A 4ZVIA 2HKJA 2HHHE 3PYEA 3OTOE 1Z0WA 1QZRA 5FLXC 3QT8A 3PYDA 2UUAI 3WU5A 4GKKI 5LMNI 3K85A 4DV0E 3ZKBA 2BM1A 1XHKA 1FKAE 2UUBI 4HXZA 2O1VA 5A2QC 5LMUE 5LL6R 2NN6E 1HNZE 1I94I 4DPXA 2CZ9A 4USMA 2JE6B 4B3SE 4PU9A 3M7ND 4DR6E 2VQFE 1H7UA 3J81Q 4JI8I 2HFUA 4OO1F 4P52A 1HR0E 3T1YI 4KQVA 2GQ0A 1Y5YA 4JI2E 1UEKA 3T1HE 2UXDE 5ELWA 2WNRA 1N36I 2UXBE 4NXME 4DUYI 4HACA 3LTOA 3WU4A 4DV6I 4LF4E 1N32E 1XNRI 1U2RA 2BA1G 1Z59A 2HHHI 3OTOI 1ZM3A 4Z7YA 5K36E 2JEBA 4YHHE 5K36D 2V2QA 5IT9C 4QNJA 2HFSA 1A6FA 3HULA 4IFDA 2WW4A 4DV0I 2PNMA 5BR8E 4DR3E 3Q1QA 4U3DA 3B4TA 1XMOE 1D6TA 1E3PA 5LMUI 1HNZI 2R42A 2ZBKB 1OYRA 4WUDA 1EI1A 2NN6C 4OO1D 4B3SI 4DR6I 4LFCE 2VQFI 1UDOA 4JI4E 1OYSA 4IZJD 1HR0I 3P3EA 4K0KE 4OKGA 4BA1A 4JI2I 4MU3A 3T1HI 2WNRB 4FW4A 2UXDI 4B3ME 2UXBI 3ZZUA 4NXMI 1N0VC 2F4VI 2C38A 4JI0E 2EFGA 1YHCA 4LF4I 1N32I 3J7AG 2C39A 5JEAA 4M1KA 4PRXA 3J80Q 4BA2A 2JEBB 4LFBE 4DU8A 2V8PA 4YHHI 4IFDB 4X65E 4DV1E 5C0XA 1XMQE 1FI4A 2NN6F 5BR8I 4DR3I 1Y4SA 1XMOI 4B3RE 4GKJE 1Y60A 1KTVA 3NZKA 2UU9E 3PS1A 3UHMA 1WUUA
chains in the Genus database with same CATH topology
2F1DA 5EKWA 5DNLA 4MU0A 4QNKA 4LOMA 4LPFA 5DNXA 5EL9A 4MU4A 5ELWA 4GQUA 4MU3A 4QNJA 4MU1A 2AE8A 1RHYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F1D A;  5EKW A;  5DNL A;  4MU0 A;  4QNK A;  4LOM A;  4LPF A;  5DNX A;  5EL9 A;  4MU4 A;  5ELW A;  4GQU A;  4MU3 A;  4QNJ A;  4MU1 A;  2AE8 A;  1RHY A; 
#chains in the Genus database with same CATH topology
 1Z0C A;  4LFC I;  4DPY A;  3P76 A;  4JI4 I;  4JI6 E;  4LF9 E;  1Z0V A;  2V2V A;  4K0K I;  3M85 D;  4BA1 B;  4FWD A;  4AQY E;  2BM0 A;  5GMD A;  1NZ0 A;  1K47 A;  1Z5B A;  1YH8 A;  4MU1 A;  4B3M I;  3PS3 A;  2PNZ A;  2J65 A;  2C38 B;  3B8H A;  4JI0 I;  2C39 B;  5JEA B;  4URL A;  4HY1 A;  4DV2 E;  3U1Y A;  2VES A;  5K36 F;  5EKW A;  4BA2 B;  1XNQ E;  2IES A;  4OZE A;  4DU7 A;  4LFB I;  2NN6 D;  1J5E E;  4X65 I;  4DV1 I;  5C0X B;  3GLL A;  4DXL A;  3F0N A;  1XMQ I;  2J7K A;  2V34 A;  3QT7 A;  4FW3 A;  4GKJ I;  4B3R I;  3CDI A;  2BV3 A;  1Z5C A;  2O1W A;  2UU9 I;  1VIS A;  4JI7 E;  3ZM7 A;  4X64 E;  4JI6 I;  4LF9 I;  4DV4 E;  2CGE A;  1Y6Z A;  1ZM4 A;  4NXN E;  2HKE A;  1B62 A;  4AQY I;  4LF7 E;  2PO1 A;  1R6L A;  2PNZ B;  3P06 A;  1H72 C;  2R3V A;  5JEA C;  3CDJ A;  4LF8 E;  4P7A A;  4USK A;  4OO1 A;  1ZXN A;  4LCF A;  4DV2 I;  1UDS A;  2AE8 A;  2A2C A;  4IZK A;  4IZJ A;  4JI5 E;  3K1J A;  2DEJ A;  5IWA E;  2F1D A;  3PYG A;  3GON A;  4LOM A;  4LPF A;  4JV5 E;  3GME A;  1ELO A;  4MU4 A;  1J5E I;  1DAR A;  1USV A;  3PRY A;  2PO2 A;  3QT5 A;  4AID A;  1ZXM A;  2AJ4 A;  2V2Z A;  4X62 E;  3CWV A;  2E5L E;  4QNK A;  4JI7 I;  1UDQ A;  2PO0 A;  2BA1 D;  4X64 I;  4DV4 I;  3KRN A;  3J81 C;  1P42 A;  1Y4U A;  3HKM A;  4LCG A;  4NXN I;  4JI3 E;  1KKH A;  3B78 A;  3HJC A;  4DR2 E;  4IFD E;  1ZM9 A;  2HK2 A;  4FW7 A;  3ZZT A;  4LF7 I;  2PO1 B;  5FLX Q;  3H4L A;  3P3C A;  1OJ4 A;  4I3H A;  1OYP A;  4LF8 I;  4OO1 B;  2JEA A;  1ZM2 A;  5DRP A;  4UT4 A;  3LNU A;  2DEI A;  4IZK B;  4IZJ B;  4PRV A;  3M6A A;  5A2Q Q;  1PKP A;  4JI5 I;  2IOQ A;  2BR2 B;  5IWA I;  2GS8 A;  4WUB A;  4GKK E;  2BA0 G;  4JV5 I;  4MQY A;  2Z5E A;  1FWL A;  4HYM A;  1MX0 A;  2PO2 B;  4FN5 A;  1XXE A;  4XTJ A;  4X62 I;  3WU3 A;  3DD6 A;  3JAM Q;  2LJP A;  1IBM E;  2JT2 A;  4JI1 E;  4EMD A;  2E5L I;  4LF6 E;  5JEA E;  2PO0 B;  2GO3 A;  5JEA D;  4DPT A;  1FWK A;  1IBL E;  4YY3 E;  1BKN A;  2NN6 A;  1PIE A;  1Z0E A;  2XEX A;  3L7Z A;  4JI3 I;  1N34 E;  1KVK A;  5L3J A;  4DR2 I;  2Z5C A;  2VF3 A;  5DRR A;  5C0X E;  4DR4 E;  1Z5A A;  1N0U A;  4IFD C;  2A2D A;  4LCH A;  4FW5 A;  5IT9 Q;  4FW6 A;  1HK7 A;  2JEA B;  4JG4 A;  4DPW A;  4KHP E;  2X7I A;  1S16 A;  3ZKD A;  4DV3 E;  4X66 E;  3J80 C;  4MYU A;  2Z5B A;  2Q2E B;  1FNM A;  2UXC E;  4DPU A;  3D4J A;  1H74 A;  3H1C A;  1FJG E;  4DV5 E;  1RHY A;  5FWK A;  5K36 A;  5EL9 A;  3QT6 A;  1NHH A;  4LFA E;  4DR1 E;  1N33 E;  1IBM I;  1B63 A;  5DNL A;  4JI1 I;  4DR5 E;  4LF6 I;  4JYA E;  1S4E A;  1IBL I;  2NN6 B;  4YY3 I;  4DUZ E;  3L7Z B;  4B3T E;  2WP8 A;  1N34 I;  4IFD F;  2Z5C B;  4Z7C A;  2O1T A;  2OI2 A;  3JAM C;  2GO4 A;  4DR4 I;  2IER A;  5C0X C;  4LF5 E;  2F4V E;  1XNQ I;  2BR2 A;  1E3H A;  3LPS A;  1RRE A;  4KHP I;  2X36 A;  1MG7 A;  4MU0 A;  3B82 A;  4R1F A;  4DV3 I;  4MDT A;  2CG9 A;  4DR7 E;  1VI7 A;  4J3D A;  4X66 I;  4ISA A;  2Z5B B;  3ZZ0 A;  2PNL A;  2VQE E;  4FWG A;  3J7A M;  2UXC I;  2C37 A;  3Q6N A;  3P3G A;  3GCM A;  1FJG I;  4DV5 I;  4N3O A;  2ZM6 E;  1HNW E;  5K36 B;  1EA6 A;  2HK3 A;  3PS2 A;  2IOP A;  4IS9 A;  2NPF A;  1H73 A;  5JEA F;  4DV7 E;  3K17 A;  4LFA I;  4OX9 E;  4OO1 E;  4DR1 I;  2O1U A;  1N33 I;  1NHJ A;  4DR5 I;  4JYA I;  2UUC E;  1IBK E;  4IFD D;  1PVG A;  4DUZ I;  2WP8 B;  4B3T I;  4NBQ A;  1H7S A;  1Z0B A;  5C0X F;  1HNX E;  3U1K A;  3WU6 A;  3V2U C;  4FWH A;  1USU A;  1MU5 A;  4HAC B;  3M85 G;  4LF5 I;  2UUA E;  4MYT A;  5LMN E;  2ZIT A;  1RR9 A;  2UUB E;  4DR7 I;  1R6M A;  5DRQ A;  1Z0G A;  4UTG A;  1I94 E;  2C37 B;  2VQE I;  4FW9 A;  5K36 C;  2JE6 A;  5DNX A;  4JI8 E;  5GME A;  4U3B A;  2ZM6 I;  1HNW I;  1KIJ A;  4RPF A;  3T1Y E;  4ED4 A;  4WUC A;  4DV7 I;  4OX9 I;  4GQU A;  3M7N G;  3PYF A;  1NHI A;  2E1R A;  2UUC I;  5DRO A;  4OO1 C;  1N36 E;  1IBK I;  2O3Z A;  5C0X D;  2CVE A;  1Z0T A;  3Q6M A;  4DUY E;  1UDN A;  4DV6 E;  1HNX I;  1XNR E;  4AIM A;  2BA0 D;  3V5R A;  4AM3 A;  4ZVI A;  2HKJ A;  2HHH E;  3PYE A;  3OTO E;  1Z0W A;  1QZR A;  5FLX C;  3QT8 A;  3PYD A;  2UUA I;  3WU5 A;  4GKK I;  5LMN I;  3K85 A;  4DV0 E;  3ZKB A;  2BM1 A;  1XHK A;  1FKA E;  2UUB I;  4HXZ A;  2O1V A;  5A2Q C;  5LMU E;  5LL6 R;  2NN6 E;  1HNZ E;  1I94 I;  4DPX A;  2CZ9 A;  4USM A;  2JE6 B;  4B3S E;  4PU9 A;  3M7N D;  4DR6 E;  2VQF E;  1H7U A;  3J81 Q;  4JI8 I;  2HFU A;  4OO1 F;  4P52 A;  1HR0 E;  3T1Y I;  4KQV A;  2GQ0 A;  1Y5Y A;  4JI2 E;  1UEK A;  3T1H E;  2UXD E;  5ELW A;  2WNR A;  1N36 I;  2UXB E;  4NXM E;  4DUY I;  4HAC A;  3LTO A;  3WU4 A;  4DV6 I;  4LF4 E;  1N32 E;  1XNR I;  1U2R A;  2BA1 G;  1Z59 A;  2HHH I;  3OTO I;  1ZM3 A;  4Z7Y A;  5K36 E;  2JEB A;  4YHH E;  5K36 D;  2V2Q A;  5IT9 C;  4QNJ A;  2HFS A;  1A6F A;  3HUL A;  4IFD A;  2WW4 A;  4DV0 I;  2PNM A;  5BR8 E;  4DR3 E;  3Q1Q A;  4U3D A;  3B4T A;  1XMO E;  1D6T A;  1E3P A;  5LMU I;  1HNZ I;  2R42 A;  2ZBK B;  1OYR A;  4WUD A;  1EI1 A;  2NN6 C;  4OO1 D;  4B3S I;  4DR6 I;  4LFC E;  2VQF I;  1UDO A;  4JI4 E;  1OYS A;  4IZJ D;  1HR0 I;  3P3E A;  4K0K E;  4OKG A;  4BA1 A;  4JI2 I;  4MU3 A;  3T1H I;  2WNR B;  4FW4 A;  2UXD I;  4B3M E;  2UXB I;  3ZZU A;  4NXM I;  1N0V C;  2F4V I;  2C38 A;  4JI0 E;  2EFG A;  1YHC A;  4LF4 I;  1N32 I;  3J7A G;  2C39 A;  5JEA A;  4M1K A;  4PRX A;  3J80 Q;  4BA2 A;  2JEB B;  4LFB E;  4DU8 A;  2V8P A;  4YHH I;  4IFD B;  4X65 E;  4DV1 E;  5C0X A;  1XMQ E;  1FI4 A;  2NN6 F;  5BR8 I;  4DR3 I;  1Y4S A;  1XMO I;  4B3R E;  4GKJ E;  1Y60 A;  1KTV A;  3NZK A;  2UU9 E;  3PS1 A;  3UHM A;  1WUU A; 
#chains in the Genus database with same CATH homology
 2F1D A;  5EKW A;  5DNL A;  4MU0 A;  4QNK A;  4LOM A;  4LPF A;  5DNX A;  5EL9 A;  4MU4 A;  5ELW A;  4GQU A;  4MU3 A;  4QNJ A;  4MU1 A;  2AE8 A;  1RHY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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