5ELWA

A. thaliana igpd2 in complex with the triazole-phosphonate inhibitor, (r)-c348, to 1.36a resolution
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
199
structure length
199
Chain Sequence
SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Imidazoleglycerol-phosphate dehydratase 2, chloroplastic
publication title Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Lyase
total genus 65
structure length 199
sequence length 199
ec nomenclature ec 4.2.1.19: Imidazoleglycerol-phosphate dehydratase.
pdb deposition date 2015-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00475 IGPD Imidazoleglycerol-phosphate dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA01
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA02
4LPFA 4QNJA 5EL9A 4QNKA 5DNXA 5ELWA 4LOMA 5DNLA 4MU3A 1RHYA 4MU1A 2AE8A 4GQUA 4MU0A 5EKWA 2F1DA 4MU4A
chains in the Genus database with same CATH superfamily
2J7KA 1H72C 1N0UA 1Z0WA 2Z5CB 2X7IA 3ZZ0A 2O3ZA 3HKMA 4OX9I 3PS3A 4IFDB 4ED4A 4MDTA 4NBQA 4WUBA 2WW4A 5C0XF 2DEIA 4MYUA 2BA0D 4FW9A 3J7AM 4DV5I 3U1KA 2BR2B 4OZEA 4FW4A 1H7SA 3P3GA 4IZKB 5C0XC 4LOMA 4IS9A 1HNXE 2PNLA 4GKKE 4DPXA 4XTJA 3DD6A 4PU9A 4LFBE 4X64E 4MYTA 4DR6I 2IOPA 3J81Q 4DU7A 3OTOI 2GQ0A 2UUBI 1HNWI 1OYPA 2NN6F 3ZZUA 4IFDA 5GMEA 4K0KI 5K36F 1FKAE 2BM0A 4FW3A 4J3DA 2BR2A 2V8PA 4DV4E 1S16A 2NN6C 1IBME 4IZKA 1I94E 4DPTA 3ZZTA 5K36C 1N0VC 4FW5A 4JI3E 4LF8I 4B3SI 3CDIA 3KRNA 4I3HA 1XNQE 3V2UC 2UXCE 1FJGE 3LNUA 2VQFI 4QNKA 2E5LE 4LFCI 2LJPA 4PRVA 1FWKA 4JI1E 1H73A 1KKHA 4IFDD 1YHCA 5BR8E 2PNMA 5IWAI 4ISAA 2ZBKB 4LF7E 3Q6MA 3J81C 4DV1E 4YHHE 4LPFA 3K85A 3P3CA 4DXLA 4FWGA 1HR0I 4DR7E 4FW7A 3CWVA 5JEAA 1UEKA 4B3RE 1NHJA 2Z5BA 1N36I 4DV7I 2C38B 4DV2E 1Y4SA 4WUDA 1H7UA 2Q2EB 4KQVA 4DV0I 3GCMA 4FWDA 1Z0BA 2IERA 4DR3I 4JI6I 4NXNI 4KHPE 1UDQA 1ZM4A 5DNXA 4X66E 1IBLI 4B3ME 1ELOA 1A6FA 3JAMC 4LCGA 4Z7CA 4LF4E 2F4VI 4JV5I 3WU5A 1Z0GA 1QZRA 2PO0B 3HJCA 1WUUA 1N33E 2GS8A 3T1HI 4DV3E 1N34I 4DR1E 2EFGA 4OKGA 4N3OA 1P42A 4DR2E 2Z5EA 3P06A 2UUCI 2C38A 1J5EI 1PVGA 4LFAE 4MU1A 2UXBE 4X62E 4AM3A 1XMQE 4OO1F 2GO3A 4NXMI 4FW6A 2HFSA 4JI2E 4JYAE 1RR9A 2PO2B 5C0XE 2ZM6E 4JI7E 2HK3A 2PO0A 4OO1C 2JEBB 1Z0VA 1NZ0A 1FWLA 3QT6A 4OX9E 4Z7YA 2VF3A 4GQUA 5JEAE 3PS1A 4LF5E 3B8HA 1Y6ZA 3LTOA 5DRRA 4YY3I 2VQEE 1K47A 2C37A 5LMUE 3PRYA 2BA1D 1VISA 1FNMA 2NN6E 1IBKE 2WP8B 2HK2A 1XMOI 2PO2A 1HNXI 2V34A 2NPFA 3B78A 5K36E 2JEAB 2JEBA 5LL6R 5C0XB 4JI5E 5IT9C 1USVA 2GO4A 2V2VA 4QNJA 3OTOE 4DR5I 1HNWE 3ZM7A 3GLLA 2UXDE 5ELWA 4DR4E 2AE8A 2O1WA 5JEAB 1NHHA 2Z5BB 3Q1QA 2O1UA 3V5RA 1U2RA 4DPYA 3JAMQ 5LMNI 1IBMI 4EMDA 2V2ZA 3PYEA 2HHHE 2HKEA 4U3DA 1N32E 4JI4E 2WP8A 4JI3I 4P7AA 2NN6B 1XNQI 1UDNA 2JEAA 2UXCI 5C0XA 4GKJI 3QT7A 5K36B 1FJGI 4BA1B 3T1YE 1ZM3A 4LCHA 1R6MA 4X65I 2C39A 5EKWA 4USMA 3L7ZB 1E3HA 5DRPA 5BR8I 3M6AA 1HNZI 4MU4A 2JE6B 4WUCA 2V2QA 4DV1I 3QT5A 4YHHI 1VI7A 1OJ4A 2IESA 4ZVIA 4DV6I 2AJ4A 4AQYE 4DUZI 4DR7I 1ZM2A 4DUYI 4LF9E 1N36E 3D4JA 2CG9A 4DV7E 1MX0A 2NN6A 1B62A 1UDSA 4DV2I 2CVEA 5C0XD 4JI6E 2UU9E 5K36A 1ZXNA 4BA1A 1XNRE 1Z0CA 3GMEA 1IBLE 3M85D 5DNLA 4FN5A 2BA0G 4X66I 1Z59A 4B3MI 3L7ZA 2VESA 4JV5E 4LF6I 3Q6NA 4JI0E 3HULA 4B3TE 1XXEA 2R42A 3PYDA 4LF4I 5FLXC 5JEAD 1NHIA 2JE6A 3K17A 1ZM9A 4UTGA 5EL9A 3PYFA 1Z5AA 2IOQA 1N33I 4IFDF 2C37B 3LPSA 4OO1E 1H74A 4DR1I 3B4TA 4DPWA 2BA1G 2UUCE 5IT9Q 3J80C 4FWHA 4DR2I 1R6LA 2J65A 2NN6D 4JI8E 4HACA 1OYRA 2A2CA 1RHYA 4USKA 4IFDC 4LFAI 2WNRB 2PNZB 5K36D 2UUAI 1EI1A 1XMQI 4NXME 1Z5BA 3PYGA 1UDOA 1E3PA 1MG7A 1OYSA 1RREA 3B82A 4HYMA 4MU3A 3WU3A 1Y5YA 3F0NA 3ZKDA 3U1YA 4DV5E 3M7ND 4LCFA 1PIEA 2O1TA 4BA2A 4OO1B 1BKNA 1Y60A 4LF5I 4YY3E 1PKPA 3UHMA 4GKKI 1B63A 1HK7A 2WNRA 2PNZA 2VQEI 5LMUI 5DROA 4DR6E 5JEAF 5A2QC 4LFBI 4X64I 2UUBE 5L3JA 1XMOE 2HFUA 2BV3A 4MU0A 1IBKI 2C39B 4K0KE 1Z0TA 4DR5E 5JEAC 4JI5I 2Z5CA 4HY1A 2E1RA 4DV4I 4RPFA 4MQYA 2UXDI 3K1JA 4OO1A 4LF8E 4DR4I 1I94I 4B3SE 3P3EA 4URLA 4M1KA 3PS2A 5LMNE 5DRQA 4IZJB 2VQFE 3WU4A 4LFCE 5FLXQ 1MU5A 2DEJA 2HHHI 3M85G 2E5LI 1N32I 4JI4I 4JI1I 4GKJE 5IWAE 1ZXMA 1YH8A 4P52A 1KTVA 2O1VA 4LF7I 1Z0EA 3P76A 4AIMA 3T1YI 2CGEA 2PO1B 4X65E 5GMDA 3J80Q 1HR0E 2JT2A 1USUA 4OO1D 1HNZE 4R1FA 1Y4UA 4AIDA 5FWKA 2F1DA 4UT4A 4B3RI 4DV6E 4DV0E 4IZJA 4HACB 4DUZE 4DR3E 4DUYE 4NXNE 4AQYI 4KHPI 4LF9I 1Z5CA 1S4EA 4DU8A 3QT8A 2F4VE 4U3BA 3ZKBA 2X36A 1KVKA 2UU9I 1FI4A 2PO1A 4JG4A 1XHKA 1DARA 2R3VA 3T1HE 1XNRI 2OI2A 4PRXA 3M7NG 1N34E 4LF6E 4IFDE 3GONA 4DV3I 2A2DA 1D6TA 4JI0I 2BM1A 4B3TI 3WU6A 4BA2B 3H1CA 2XEXA 3NZKA 5A2QQ 1J5EE 4IZJD 3J7AG 2HKJA 1EA6A 2UXBI 4X62I 4DPUA 4HXZA 1KIJA 2ZITA 4JI2I 4JYAI 4JI8I 2UUAE 2CZ9A 2ZM6I 4JI7I 3H4LA 3CDJA
chains in the Genus database with same CATH topology
4LPFA 4QNJA 5EL9A 4QNKA 5DNXA 5ELWA 4LOMA 5DNLA 4MU3A 1RHYA 4MU1A 2AE8A 4GQUA 4MU0A 5EKWA 2F1DA 4MU4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4LPF A;  4QNJ A;  5EL9 A;  4QNK A;  5DNX A;  5ELW A;  4LOM A;  5DNL A;  4MU3 A;  1RHY A;  4MU1 A;  2AE8 A;  4GQU A;  4MU0 A;  5EKW A;  2F1D A;  4MU4 A; 
#chains in the Genus database with same CATH topology
 2J7K A;  1H72 C;  1N0U A;  1Z0W A;  2Z5C B;  2X7I A;  3ZZ0 A;  2O3Z A;  3HKM A;  4OX9 I;  3PS3 A;  4IFD B;  4ED4 A;  4MDT A;  4NBQ A;  4WUB A;  2WW4 A;  5C0X F;  2DEI A;  4MYU A;  2BA0 D;  4FW9 A;  3J7A M;  4DV5 I;  3U1K A;  2BR2 B;  4OZE A;  4FW4 A;  1H7S A;  3P3G A;  4IZK B;  5C0X C;  4LOM A;  4IS9 A;  1HNX E;  2PNL A;  4GKK E;  4DPX A;  4XTJ A;  3DD6 A;  4PU9 A;  4LFB E;  4X64 E;  4MYT A;  4DR6 I;  2IOP A;  3J81 Q;  4DU7 A;  3OTO I;  2GQ0 A;  2UUB I;  1HNW I;  1OYP A;  2NN6 F;  3ZZU A;  4IFD A;  5GME A;  4K0K I;  5K36 F;  1FKA E;  2BM0 A;  4FW3 A;  4J3D A;  2BR2 A;  2V8P A;  4DV4 E;  1S16 A;  2NN6 C;  1IBM E;  4IZK A;  1I94 E;  4DPT A;  3ZZT A;  5K36 C;  1N0V C;  4FW5 A;  4JI3 E;  4LF8 I;  4B3S I;  3CDI A;  3KRN A;  4I3H A;  1XNQ E;  3V2U C;  2UXC E;  1FJG E;  3LNU A;  2VQF I;  4QNK A;  2E5L E;  4LFC I;  2LJP A;  4PRV A;  1FWK A;  4JI1 E;  1H73 A;  1KKH A;  4IFD D;  1YHC A;  5BR8 E;  2PNM A;  5IWA I;  4ISA A;  2ZBK B;  4LF7 E;  3Q6M A;  3J81 C;  4DV1 E;  4YHH E;  4LPF A;  3K85 A;  3P3C A;  4DXL A;  4FWG A;  1HR0 I;  4DR7 E;  4FW7 A;  3CWV A;  5JEA A;  1UEK A;  4B3R E;  1NHJ A;  2Z5B A;  1N36 I;  4DV7 I;  2C38 B;  4DV2 E;  1Y4S A;  4WUD A;  1H7U A;  2Q2E B;  4KQV A;  4DV0 I;  3GCM A;  4FWD A;  1Z0B A;  2IER A;  4DR3 I;  4JI6 I;  4NXN I;  4KHP E;  1UDQ A;  1ZM4 A;  5DNX A;  4X66 E;  1IBL I;  4B3M E;  1ELO A;  1A6F A;  3JAM C;  4LCG A;  4Z7C A;  4LF4 E;  2F4V I;  4JV5 I;  3WU5 A;  1Z0G A;  1QZR A;  2PO0 B;  3HJC A;  1WUU A;  1N33 E;  2GS8 A;  3T1H I;  4DV3 E;  1N34 I;  4DR1 E;  2EFG A;  4OKG A;  4N3O A;  1P42 A;  4DR2 E;  2Z5E A;  3P06 A;  2UUC I;  2C38 A;  1J5E I;  1PVG A;  4LFA E;  4MU1 A;  2UXB E;  4X62 E;  4AM3 A;  1XMQ E;  4OO1 F;  2GO3 A;  4NXM I;  4FW6 A;  2HFS A;  4JI2 E;  4JYA E;  1RR9 A;  2PO2 B;  5C0X E;  2ZM6 E;  4JI7 E;  2HK3 A;  2PO0 A;  4OO1 C;  2JEB B;  1Z0V A;  1NZ0 A;  1FWL A;  3QT6 A;  4OX9 E;  4Z7Y A;  2VF3 A;  4GQU A;  5JEA E;  3PS1 A;  4LF5 E;  3B8H A;  1Y6Z A;  3LTO A;  5DRR A;  4YY3 I;  2VQE E;  1K47 A;  2C37 A;  5LMU E;  3PRY A;  2BA1 D;  1VIS A;  1FNM A;  2NN6 E;  1IBK E;  2WP8 B;  2HK2 A;  1XMO I;  2PO2 A;  1HNX I;  2V34 A;  2NPF A;  3B78 A;  5K36 E;  2JEA B;  2JEB A;  5LL6 R;  5C0X B;  4JI5 E;  5IT9 C;  1USV A;  2GO4 A;  2V2V A;  4QNJ A;  3OTO E;  4DR5 I;  1HNW E;  3ZM7 A;  3GLL A;  2UXD E;  5ELW A;  4DR4 E;  2AE8 A;  2O1W A;  5JEA B;  1NHH A;  2Z5B B;  3Q1Q A;  2O1U A;  3V5R A;  1U2R A;  4DPY A;  3JAM Q;  5LMN I;  1IBM I;  4EMD A;  2V2Z A;  3PYE A;  2HHH E;  2HKE A;  4U3D A;  1N32 E;  4JI4 E;  2WP8 A;  4JI3 I;  4P7A A;  2NN6 B;  1XNQ I;  1UDN A;  2JEA A;  2UXC I;  5C0X A;  4GKJ I;  3QT7 A;  5K36 B;  1FJG I;  4BA1 B;  3T1Y E;  1ZM3 A;  4LCH A;  1R6M A;  4X65 I;  2C39 A;  5EKW A;  4USM A;  3L7Z B;  1E3H A;  5DRP A;  5BR8 I;  3M6A A;  1HNZ I;  4MU4 A;  2JE6 B;  4WUC A;  2V2Q A;  4DV1 I;  3QT5 A;  4YHH I;  1VI7 A;  1OJ4 A;  2IES A;  4ZVI A;  4DV6 I;  2AJ4 A;  4AQY E;  4DUZ I;  4DR7 I;  1ZM2 A;  4DUY I;  4LF9 E;  1N36 E;  3D4J A;  2CG9 A;  4DV7 E;  1MX0 A;  2NN6 A;  1B62 A;  1UDS A;  4DV2 I;  2CVE A;  5C0X D;  4JI6 E;  2UU9 E;  5K36 A;  1ZXN A;  4BA1 A;  1XNR E;  1Z0C A;  3GME A;  1IBL E;  3M85 D;  5DNL A;  4FN5 A;  2BA0 G;  4X66 I;  1Z59 A;  4B3M I;  3L7Z A;  2VES A;  4JV5 E;  4LF6 I;  3Q6N A;  4JI0 E;  3HUL A;  4B3T E;  1XXE A;  2R42 A;  3PYD A;  4LF4 I;  5FLX C;  5JEA D;  1NHI A;  2JE6 A;  3K17 A;  1ZM9 A;  4UTG A;  5EL9 A;  3PYF A;  1Z5A A;  2IOQ A;  1N33 I;  4IFD F;  2C37 B;  3LPS A;  4OO1 E;  1H74 A;  4DR1 I;  3B4T A;  4DPW A;  2BA1 G;  2UUC E;  5IT9 Q;  3J80 C;  4FWH A;  4DR2 I;  1R6L A;  2J65 A;  2NN6 D;  4JI8 E;  4HAC A;  1OYR A;  2A2C A;  1RHY A;  4USK A;  4IFD C;  4LFA I;  2WNR B;  2PNZ B;  5K36 D;  2UUA I;  1EI1 A;  1XMQ I;  4NXM E;  1Z5B A;  3PYG A;  1UDO A;  1E3P A;  1MG7 A;  1OYS A;  1RRE A;  3B82 A;  4HYM A;  4MU3 A;  3WU3 A;  1Y5Y A;  3F0N A;  3ZKD A;  3U1Y A;  4DV5 E;  3M7N D;  4LCF A;  1PIE A;  2O1T A;  4BA2 A;  4OO1 B;  1BKN A;  1Y60 A;  4LF5 I;  4YY3 E;  1PKP A;  3UHM A;  4GKK I;  1B63 A;  1HK7 A;  2WNR A;  2PNZ A;  2VQE I;  5LMU I;  5DRO A;  4DR6 E;  5JEA F;  5A2Q C;  4LFB I;  4X64 I;  2UUB E;  5L3J A;  1XMO E;  2HFU A;  2BV3 A;  4MU0 A;  1IBK I;  2C39 B;  4K0K E;  1Z0T A;  4DR5 E;  5JEA C;  4JI5 I;  2Z5C A;  4HY1 A;  2E1R A;  4DV4 I;  4RPF A;  4MQY A;  2UXD I;  3K1J A;  4OO1 A;  4LF8 E;  4DR4 I;  1I94 I;  4B3S E;  3P3E A;  4URL A;  4M1K A;  3PS2 A;  5LMN E;  5DRQ A;  4IZJ B;  2VQF E;  3WU4 A;  4LFC E;  5FLX Q;  1MU5 A;  2DEJ A;  2HHH I;  3M85 G;  2E5L I;  1N32 I;  4JI4 I;  4JI1 I;  4GKJ E;  5IWA E;  1ZXM A;  1YH8 A;  4P52 A;  1KTV A;  2O1V A;  4LF7 I;  1Z0E A;  3P76 A;  4AIM A;  3T1Y I;  2CGE A;  2PO1 B;  4X65 E;  5GMD A;  3J80 Q;  1HR0 E;  2JT2 A;  1USU A;  4OO1 D;  1HNZ E;  4R1F A;  1Y4U A;  4AID A;  5FWK A;  2F1D A;  4UT4 A;  4B3R I;  4DV6 E;  4DV0 E;  4IZJ A;  4HAC B;  4DUZ E;  4DR3 E;  4DUY E;  4NXN E;  4AQY I;  4KHP I;  4LF9 I;  1Z5C A;  1S4E A;  4DU8 A;  3QT8 A;  2F4V E;  4U3B A;  3ZKB A;  2X36 A;  1KVK A;  2UU9 I;  1FI4 A;  2PO1 A;  4JG4 A;  1XHK A;  1DAR A;  2R3V A;  3T1H E;  1XNR I;  2OI2 A;  4PRX A;  3M7N G;  1N34 E;  4LF6 E;  4IFD E;  3GON A;  4DV3 I;  2A2D A;  1D6T A;  4JI0 I;  2BM1 A;  4B3T I;  3WU6 A;  4BA2 B;  3H1C A;  2XEX A;  3NZK A;  5A2Q Q;  1J5E E;  4IZJ D;  3J7A G;  2HKJ A;  1EA6 A;  2UXB I;  4X62 I;  4DPU A;  4HXZ A;  1KIJ A;  2ZIT A;  4JI2 I;  4JYA I;  4JI8 I;  2UUA E;  2CZ9 A;  2ZM6 I;  4JI7 I;  3H4L A;  3CDJ A; 
#chains in the Genus database with same CATH homology
 4LPF A;  4QNJ A;  5EL9 A;  4QNK A;  5DNX A;  5ELW A;  4LOM A;  5DNL A;  4MU3 A;  1RHY A;  4MU1 A;  2AE8 A;  4GQU A;  4MU0 A;  5EKW A;  2F1D A;  4MU4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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