5ELWA

A. thaliana igpd2 in complex with the triazole-phosphonate inhibitor, (r)-c348, to 1.36a resolution
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
199
structure length
199
Chain Sequence
SARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQATESDPRRGGTIPSSKGVLSRS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
source organism Arabidopsis thaliana
publication title Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
pubmed doi rcsb
molecule keywords Imidazoleglycerol-phosphate dehydratase 2, chloroplastic
total genus 65
structure length 199
sequence length 199
ec nomenclature ec 4.2.1.19: Imidazoleglycerol-phosphate dehydratase.
pdb deposition date 2015-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00475 IGPD Imidazoleglycerol-phosphate dehydratase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA01
3.30.230.40 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Imidazole glycerol phosphate dehydratase; domain 1 5elwA02
5DNLA 4QNJA 4MU4A 4GQUA 4MU1A 4MU3A 2F1DA 5DNXA 4LOMA 5EKWA 4QNKA 1RHYA 4MU0A 5ELWA 2AE8A 5EL9A 4LPFA
chains in the Genus database with same CATH superfamily
4YHHI 1E3HA 2Z5BA 4OO1B 2F1DA 4FN5A 5JEAE 1N32I 4LF6E 4DR2E 4BA1A 4X62I 2UUAE 3PYFA 1XNQE 4GKKI 4AIDA 4IFDA 3U1KA 1IBME 3DD6A 3PYDA 1J5EE 4UTGA 4LF4I 1Z0CA 2PO1B 4LCGA 2NN6C 2UXCE 1NHJA 5GMDA 1N0UA 2NN6E 5C0XD 2WNRB 5DNLA 4X66I 1D6TA 1FNMA 1N33I 4KQVA 1RHYA 3T1YE 4B3RI 2VQEI 2GO4A 4DV0I 4FW4A 1XMOE 1ZXNA 5C0XB 1ZM3A 3QT7A 3T1HE 1S4EA 4DPWA 5JEAB 4LFAI 3PRYA 1N34E 4GKJE 1H72C 4LF8I 4JYAE 4AIMA 4DV4E 4PU9A 1UDNA 3OTOE 1HNZE 4LFCI 2C38A 2Z5EA 1H7UA 2VQFI 4DR1E 2UXBI 1OJ4A 2J65A 4URLA 4DV2I 4JI4E 1Z0GA 1ZM2A 3HJCA 4AM3A 4IFDE 2CZ9A 1XNRE 3L7ZB 2UUBI 4PRXA 4JI0E 4B3ME 2IOQA 4GQUA 5EL9A 1E3PA 3V2UC 3NZKA 2UXDE 5DRRA 2IESA 1USUA 4USKA 4AQYE 4X65E 1Y4UA 4LF9E 1ZM9A 2R42A 4LFBE 4FWGA 2BA0G 1NZ0A 2X36A 4MYTA 4JI3E 2Z5BB 4WUCA 1B62A 2V2VA 2WNRA 2F4VE 3H1CA 1FI4A 3QT8A 1N36E 3GCMA 4DPTA 4Z7CA 3K85A 5DRPA 4X64I 5C0XA 3LTOA 1FWKA 1PVGA 1QZRA 2BA1D 4IFDB 1MG7A 2V8PA 1B63A 4DUYI 4OO1C 1Z0VA 5LMUI 1Z5CA 4LCHA 4USMA 4DPXA 1HNXI 4B3TE 3M85G 1XXEA 4DR7E 4P7AA 4DU8A 3J80C 1R6LA 4BA2B 3B78A 4JI6E 3L7ZA 4FWDA 3JAMQ 1P42A 2A2DA 4FW9A 4JI2I 4R1FA 2GO3A 3PS2A 5K36F 1HR0I 4NXMI 2AE8A 3J7AG 4DXLA 5K36D 1IBLI 2J7KA 3B8HA 4WUDA 2V2QA 5LL6R 4LF5E 4DV3I 5C0XC 1OYPA 5C0XE 5IWAI 4UT4A 2UU9E 1PIEA 4ISAA 4MU1A 5K36B 5JEAC 4QNKA 2A2CA 3P3CA 1I94E 4X62E 1Y4SA 1KVKA 4IS9A 2O1UA 4N3OA 2CG9A 3CWVA 4DV7I 3P76A 1XMQI 2IOPA 2PNLA 4MU0A 1YH8A 1OYRA 2E5LE 3M7ND 4DR4E 4KHPE 4JI7E 1HNWI 1N33E 4NXNI 4LF7I 5FLXQ 1NHHA 5DRQA 1WUUA 4BA2A 5ELWA 1MU5A 2ZBKB 4FW3A 4WUBA 1Z0TA 1Y60A 4DR2I 4LF6I 1XNQI 3U1YA 4LPFA 2XEXA 4LF8E 1IBMI 4HXZA 2ZITA 1J5EI 4MU4A 4DV1E 4DR5E 2UXCI 5BR8E 3J81Q 2BM0A 5K36A 4IFDC 3LNUA 3T1YI 2HK3A 3CDJA 4DR6E 4JI5E 1XMOI 1IBKE 4DR3E 2HK2A 2PNMA 4ED4A 4DUZE 3T1HI 2HHHE 4ZVIA 3P06A 3KRNA 4OX9E 4DV6E 4GKJI 4JYAI 4DV4I 4DV5E 1OYSA 3OTOI 2WW4A 3P3GA 1HNZI 2ZM6E 2O1VA 5IT9C 2Q2EB 1HK7A 4DR1I 1FJGE 3PYEA 5IT9Q 4JI4I 1DARA 1XNRI 5DNXA 3ZKDA 4LCFA 3ZZTA 4M1KA 4JI0I 2VF3A 4P52A 4B3MI 1NHIA 1Z0WA 4FW5A 4DPYA 4JI1E 1ZM4A 5K36C 4EMDA 2UXDI 4OKGA 1HNXE 5K36E 1BKNA 4HYMA 3WU4A 4X65I 4AQYI 4U3DA 1H74A 4LF9I 4LFBI 2BM1A 4K0KE 4JI3I 2UUCE 4I3HA 4JI8E 5LMNE 4JG4A 3JAMC 2F4VI 1KKHA 1N36I 1S16A 4YY3E 4JV5E 2IERA 3HULA 2PNZA 2BA1G 4B3SE 3B82A 1Z0EA 2VESA 1U2RA 2NPFA 4YHHE 4B3TI 3Q1QA 2PO0A 2AJ4A 4DR7I 1N32E 2BV3A 1H7SA 1EA6A 4FWHA 4MU3A 4MYUA 4GKKE 4JI6I 2BR2A 2Z5CA 2PO2A 2R3VA 4IZJD 1FKAE 1UDQA 3D4JA 1ZXMA 3QT5A 4RPFA 4OO1F 1UEKA 3PS1A 3Q6NA 4J3DA 4LF4E 4OO1D 4FW6A 3P3EA 1FWLA 5FLXC 4LF5I 2JT2A 4X66E 2UU9I 4B3RE 2VQEE 1R6MA 4DV0E 4MQYA 2GS8A 2JEBA 1UDSA 1I94I 2JEAB 2LJPA 3K17A 4HY1A 4IZKA 2UUAI 3ZM7A 4LFAE 2HFUA 2C37A 1EI1A 4LFCE 3WU3A 5C0XF 2CGEA 2VQFE 2E5LI 2UXBE 3H4LA 3PYGA 3M7NG 3J81C 4DR4I 4KHPI 4JI7I 3ZZUA 5JEAF 1Z5AA 4DV2E 1Y6ZA 5JEAD 4HACB 2UUBE 2V34A 4OZEA 3V5RA 3ZKBA 2PNZB 1VISA 4FW7A 1Z0BA 2HKJA 1N34I 3Q6MA 4QNJA 4IZJA 2NN6F 4DV1I 2EFGA 1Z5BA 4DR5I 2BA0D 2NN6D 3GONA 1MX0A 5L3JA 4OO1A 2WP8B 5BR8I 2PO0B 4Z7YA 2NN6B 4X64E 3HKMA 1KIJA 4DR6I 1K47A 3PS3A 4JI5I 2JE6B 1IBKI 2BR2B 2Z5CB 2PO2B 4MDTA 4U3BA 2JEAA 4DR3I 2CVEA 3WU5A 1RR9A 4DUYE 2DEJA 3LPSA 2V2ZA 4DUZI 2HHHI 1XHKA 3F0NA 1RREA 5LMUE 4OX9I 5A2QC 4DV6I 2PO1A 4DU7A 4DV5I 2C39B 2OI2A 3M85D 2HFSA 2ZM6I 5A2QQ 1Z59A 4IFDF 2HKEA 1VI7A 1ELOA 2X7IA 4IFDD 1FJGI 2O1TA 4DPUA 2JEBB 3GMEA 4HACA 4BA1B 3ZZ0A 1USVA 5FWKA 3K1JA 4JI2E 3UHMA 4IZKB 5DROA 5JEAA 2E1RA 3GLLA 2C37B 1HR0E 1Y5YA 4NXME 4JI1I 4OO1E 1IBLE 4DV3E 1A6FA 5IWAE 3WU6A 1PKPA 2O1WA 5EKWA 4K0KI 2O3ZA 2WP8A 2UUCI 4JI8I 3J80Q 3CDIA 5LMNI 2NN6A 4YY3I 4JV5I 1KTVA 2JE6A 2DEIA 4NBQA 4DV7E 3B4TA 3M6AA 1XMQE 1YHCA 4LOMA 1UDOA 4XTJA 3QT6A 4B3SI 4PRVA 2C38B 4IZJB 1N0VC 3J7AM 1HNWE 2GQ0A 4LF7E 4NXNE 5GMEA 2C39A 1H73A
chains in the Genus database with same CATH topology
5DNLA 4QNJA 4MU4A 4GQUA 4MU1A 4MU3A 2F1DA 5DNXA 4LOMA 5EKWA 4QNKA 1RHYA 4MU0A 5ELWA 2AE8A 5EL9A 4LPFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5DNL A;  4QNJ A;  4MU4 A;  4GQU A;  4MU1 A;  4MU3 A;  2F1D A;  5DNX A;  4LOM A;  5EKW A;  4QNK A;  1RHY A;  4MU0 A;  5ELW A;  2AE8 A;  5EL9 A;  4LPF A; 
#chains in the Genus database with same CATH topology
 4YHH I;  1E3H A;  2Z5B A;  4OO1 B;  2F1D A;  4FN5 A;  5JEA E;  1N32 I;  4LF6 E;  4DR2 E;  4BA1 A;  4X62 I;  2UUA E;  3PYF A;  1XNQ E;  4GKK I;  4AID A;  4IFD A;  3U1K A;  1IBM E;  3DD6 A;  3PYD A;  1J5E E;  4UTG A;  4LF4 I;  1Z0C A;  2PO1 B;  4LCG A;  2NN6 C;  2UXC E;  1NHJ A;  5GMD A;  1N0U A;  2NN6 E;  5C0X D;  2WNR B;  5DNL A;  4X66 I;  1D6T A;  1FNM A;  1N33 I;  4KQV A;  1RHY A;  3T1Y E;  4B3R I;  2VQE I;  2GO4 A;  4DV0 I;  4FW4 A;  1XMO E;  1ZXN A;  5C0X B;  1ZM3 A;  3QT7 A;  3T1H E;  1S4E A;  4DPW A;  5JEA B;  4LFA I;  3PRY A;  1N34 E;  4GKJ E;  1H72 C;  4LF8 I;  4JYA E;  4AIM A;  4DV4 E;  4PU9 A;  1UDN A;  3OTO E;  1HNZ E;  4LFC I;  2C38 A;  2Z5E A;  1H7U A;  2VQF I;  4DR1 E;  2UXB I;  1OJ4 A;  2J65 A;  4URL A;  4DV2 I;  4JI4 E;  1Z0G A;  1ZM2 A;  3HJC A;  4AM3 A;  4IFD E;  2CZ9 A;  1XNR E;  3L7Z B;  2UUB I;  4PRX A;  4JI0 E;  4B3M E;  2IOQ A;  4GQU A;  5EL9 A;  1E3P A;  3V2U C;  3NZK A;  2UXD E;  5DRR A;  2IES A;  1USU A;  4USK A;  4AQY E;  4X65 E;  1Y4U A;  4LF9 E;  1ZM9 A;  2R42 A;  4LFB E;  4FWG A;  2BA0 G;  1NZ0 A;  2X36 A;  4MYT A;  4JI3 E;  2Z5B B;  4WUC A;  1B62 A;  2V2V A;  2WNR A;  2F4V E;  3H1C A;  1FI4 A;  3QT8 A;  1N36 E;  3GCM A;  4DPT A;  4Z7C A;  3K85 A;  5DRP A;  4X64 I;  5C0X A;  3LTO A;  1FWK A;  1PVG A;  1QZR A;  2BA1 D;  4IFD B;  1MG7 A;  2V8P A;  1B63 A;  4DUY I;  4OO1 C;  1Z0V A;  5LMU I;  1Z5C A;  4LCH A;  4USM A;  4DPX A;  1HNX I;  4B3T E;  3M85 G;  1XXE A;  4DR7 E;  4P7A A;  4DU8 A;  3J80 C;  1R6L A;  4BA2 B;  3B78 A;  4JI6 E;  3L7Z A;  4FWD A;  3JAM Q;  1P42 A;  2A2D A;  4FW9 A;  4JI2 I;  4R1F A;  2GO3 A;  3PS2 A;  5K36 F;  1HR0 I;  4NXM I;  2AE8 A;  3J7A G;  4DXL A;  5K36 D;  1IBL I;  2J7K A;  3B8H A;  4WUD A;  2V2Q A;  5LL6 R;  4LF5 E;  4DV3 I;  5C0X C;  1OYP A;  5C0X E;  5IWA I;  4UT4 A;  2UU9 E;  1PIE A;  4ISA A;  4MU1 A;  5K36 B;  5JEA C;  4QNK A;  2A2C A;  3P3C A;  1I94 E;  4X62 E;  1Y4S A;  1KVK A;  4IS9 A;  2O1U A;  4N3O A;  2CG9 A;  3CWV A;  4DV7 I;  3P76 A;  1XMQ I;  2IOP A;  2PNL A;  4MU0 A;  1YH8 A;  1OYR A;  2E5L E;  3M7N D;  4DR4 E;  4KHP E;  4JI7 E;  1HNW I;  1N33 E;  4NXN I;  4LF7 I;  5FLX Q;  1NHH A;  5DRQ A;  1WUU A;  4BA2 A;  5ELW A;  1MU5 A;  2ZBK B;  4FW3 A;  4WUB A;  1Z0T A;  1Y60 A;  4DR2 I;  4LF6 I;  1XNQ I;  3U1Y A;  4LPF A;  2XEX A;  4LF8 E;  1IBM I;  4HXZ A;  2ZIT A;  1J5E I;  4MU4 A;  4DV1 E;  4DR5 E;  2UXC I;  5BR8 E;  3J81 Q;  2BM0 A;  5K36 A;  4IFD C;  3LNU A;  3T1Y I;  2HK3 A;  3CDJ A;  4DR6 E;  4JI5 E;  1XMO I;  1IBK E;  4DR3 E;  2HK2 A;  2PNM A;  4ED4 A;  4DUZ E;  3T1H I;  2HHH E;  4ZVI A;  3P06 A;  3KRN A;  4OX9 E;  4DV6 E;  4GKJ I;  4JYA I;  4DV4 I;  4DV5 E;  1OYS A;  3OTO I;  2WW4 A;  3P3G A;  1HNZ I;  2ZM6 E;  2O1V A;  5IT9 C;  2Q2E B;  1HK7 A;  4DR1 I;  1FJG E;  3PYE A;  5IT9 Q;  4JI4 I;  1DAR A;  1XNR I;  5DNX A;  3ZKD A;  4LCF A;  3ZZT A;  4M1K A;  4JI0 I;  2VF3 A;  4P52 A;  4B3M I;  1NHI A;  1Z0W A;  4FW5 A;  4DPY A;  4JI1 E;  1ZM4 A;  5K36 C;  4EMD A;  2UXD I;  4OKG A;  1HNX E;  5K36 E;  1BKN A;  4HYM A;  3WU4 A;  4X65 I;  4AQY I;  4U3D A;  1H74 A;  4LF9 I;  4LFB I;  2BM1 A;  4K0K E;  4JI3 I;  2UUC E;  4I3H A;  4JI8 E;  5LMN E;  4JG4 A;  3JAM C;  2F4V I;  1KKH A;  1N36 I;  1S16 A;  4YY3 E;  4JV5 E;  2IER A;  3HUL A;  2PNZ A;  2BA1 G;  4B3S E;  3B82 A;  1Z0E A;  2VES A;  1U2R A;  2NPF A;  4YHH E;  4B3T I;  3Q1Q A;  2PO0 A;  2AJ4 A;  4DR7 I;  1N32 E;  2BV3 A;  1H7S A;  1EA6 A;  4FWH A;  4MU3 A;  4MYU A;  4GKK E;  4JI6 I;  2BR2 A;  2Z5C A;  2PO2 A;  2R3V A;  4IZJ D;  1FKA E;  1UDQ A;  3D4J A;  1ZXM A;  3QT5 A;  4RPF A;  4OO1 F;  1UEK A;  3PS1 A;  3Q6N A;  4J3D A;  4LF4 E;  4OO1 D;  4FW6 A;  3P3E A;  1FWL A;  5FLX C;  4LF5 I;  2JT2 A;  4X66 E;  2UU9 I;  4B3R E;  2VQE E;  1R6M A;  4DV0 E;  4MQY A;  2GS8 A;  2JEB A;  1UDS A;  1I94 I;  2JEA B;  2LJP A;  3K17 A;  4HY1 A;  4IZK A;  2UUA I;  3ZM7 A;  4LFA E;  2HFU A;  2C37 A;  1EI1 A;  4LFC E;  3WU3 A;  5C0X F;  2CGE A;  2VQF E;  2E5L I;  2UXB E;  3H4L A;  3PYG A;  3M7N G;  3J81 C;  4DR4 I;  4KHP I;  4JI7 I;  3ZZU A;  5JEA F;  1Z5A A;  4DV2 E;  1Y6Z A;  5JEA D;  4HAC B;  2UUB E;  2V34 A;  4OZE A;  3V5R A;  3ZKB A;  2PNZ B;  1VIS A;  4FW7 A;  1Z0B A;  2HKJ A;  1N34 I;  3Q6M A;  4QNJ A;  4IZJ A;  2NN6 F;  4DV1 I;  2EFG A;  1Z5B A;  4DR5 I;  2BA0 D;  2NN6 D;  3GON A;  1MX0 A;  5L3J A;  4OO1 A;  2WP8 B;  5BR8 I;  2PO0 B;  4Z7Y A;  2NN6 B;  4X64 E;  3HKM A;  1KIJ A;  4DR6 I;  1K47 A;  3PS3 A;  4JI5 I;  2JE6 B;  1IBK I;  2BR2 B;  2Z5C B;  2PO2 B;  4MDT A;  4U3B A;  2JEA A;  4DR3 I;  2CVE A;  3WU5 A;  1RR9 A;  4DUY E;  2DEJ A;  3LPS A;  2V2Z A;  4DUZ I;  2HHH I;  1XHK A;  3F0N A;  1RRE A;  5LMU E;  4OX9 I;  5A2Q C;  4DV6 I;  2PO1 A;  4DU7 A;  4DV5 I;  2C39 B;  2OI2 A;  3M85 D;  2HFS A;  2ZM6 I;  5A2Q Q;  1Z59 A;  4IFD F;  2HKE A;  1VI7 A;  1ELO A;  2X7I A;  4IFD D;  1FJG I;  2O1T A;  4DPU A;  2JEB B;  3GME A;  4HAC A;  4BA1 B;  3ZZ0 A;  1USV A;  5FWK A;  3K1J A;  4JI2 E;  3UHM A;  4IZK B;  5DRO A;  5JEA A;  2E1R A;  3GLL A;  2C37 B;  1HR0 E;  1Y5Y A;  4NXM E;  4JI1 I;  4OO1 E;  1IBL E;  4DV3 E;  1A6F A;  5IWA E;  3WU6 A;  1PKP A;  2O1W A;  5EKW A;  4K0K I;  2O3Z A;  2WP8 A;  2UUC I;  4JI8 I;  3J80 Q;  3CDI A;  5LMN I;  2NN6 A;  4YY3 I;  4JV5 I;  1KTV A;  2JE6 A;  2DEI A;  4NBQ A;  4DV7 E;  3B4T A;  3M6A A;  1XMQ E;  1YHC A;  4LOM A;  1UDO A;  4XTJ A;  3QT6 A;  4B3S I;  4PRV A;  2C38 B;  4IZJ B;  1N0V C;  3J7A M;  1HNW E;  2GQ0 A;  4LF7 E;  4NXN E;  5GME A;  2C39 A;  1H73 A; 
#chains in the Genus database with same CATH homology
 5DNL A;  4QNJ A;  4MU4 A;  4GQU A;  4MU1 A;  4MU3 A;  2F1D A;  5DNX A;  4LOM A;  5EKW A;  4QNK A;  1RHY A;  4MU0 A;  5ELW A;  2AE8 A;  5EL9 A;  4LPF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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