2VQEI

Modified uridines with c5-methylene substituents at the first position of the trna anticodon stabilize u-g wobble pairing during decoding
Total Genus 28
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
127
structure length
127
Chain Sequence
EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGRFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Modified Uridines with C5-Methylene Substituents at the First Position of the tRNA Anticodon Stabilize U.G Wobble Pairing During Decoding.
pubmed doi rcsb
molecule tags Ribosome
molecule keywords 16S RRNA
total genus 28
structure length 127
sequence length 127
ec nomenclature
pdb deposition date 2008-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00380 Ribosomal_S9 Ribosomal protein S9/S16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5; domain 2 Ribosomal Protein S5; domain 2 2vqeI00
3LNUA 4DV1E 4JI8E 3F0NA 4LF5I 4HXZA 3T1YE 4I3HA 1Z0EA 3B8HA 4WUDA 5FLXC 4JYAE 4DXLA 2HHHI 4JI6E 5FLXQ 1FWLA 4X62I 1BKNA 1MU5A 2VF3A 4LF6I 1ZM9A 4DR4I 4JI3I 5LMUI 1J5EE 1N34E 5LMNI 2Q2EB 4B3RI 1ELOA 2OI2A 2AJ4A 2HKJA 4JI7I 3PYDA 4NXMI 4DR6E 1Z0CA 2ZITA 2HFUA 2V2VA 5IWAE 4DV4I 2UXCE 4DPXA 1HR0E 5GMDA 2UU9I 4JV5I 4DV6E 1H7UA 1NZ0A 1H73A 2A2CA 4FN5A 4WUBA 1PVGA 4OX9E 5L3JA 1XNQI 4JI4E 4AQYI 2GS8A 1IBME 4GKJI 2XEXA 4YY3I 2BM1A 3JAMC 1HNZE 1I94I 4JI1I 4NXNE 4DU7A 4LFCE 2UUAI 1NHIA 4Z7CA 4B3TI 3QT5A 1XMQI 4UT4A 4DV0E 4DR7I 3ZM7A 3B82A 1IBKE 2UXDE 2X7IA 2F4VI 1HNXI 4DR3E 2UXBE 2UUCE 1ZM2A 1Z5AA 3PYGA 4DUZE 4X65E 1Z0VA 3T1HE 3D4JA 3OTOE 1QZRA 3V5RA 1Z0TA 3WU6A 4KQVA 4LFBE 1N32I 1MX0A 3PYEA 4DV7E 1UEKA 4FW9A 1MG7A 1FNMA 4DV5I 3M6AA 5IT9C 4YHHI 4DV3I 3V2UC 5IT9Q 2R3VA 4MYUA 1HNWE 5BR8E 4LF4I 3K17A 4LF5E 1RREA 2VQEI 4DR5I 1N0UA 4JI5I 4USMA 2HHHE 4JI2I 2ZBKB 2DEIA 2E5LI 4GKKI 4LF7I 1IBLI 4X62E 4LF6E 2EFGA 4DR4E 1KKHA 4JI3E 5LMNE 1XNRI 4JYAI 3WU3A 2ZM6I 1N0VC 4FWHA 4JI7E 1Z0GA 3QT6A 2VQFI 4DR2E 1FI4A 1N34I 3QT7A 4DV4E 4M1KA 4HACB 3K1JA 4JV5E 4ZVIA 4X66I 4DR6I 1H74A 2A2DA 1KIJA 1XNQE 4LF8E 4AQYE 4GKJE 4DV6I 2WW4A 4YY3E 4DR1I 1PKPA 1Z0BA 3JAMQ 4JI1E 1Z0WA 5GMEA 1S16A 4JI4I 2UUAE 1XMOI 1Z5BA 4B3TE 1XMQE 1FKAE 2HFSA 4PRVA 4DUYI 2E1RA 2HKEA 4B3MI 4NXNI 2F4VE 1HNXE 4JG4A 3J7AM 2CZ9A 4UTGA 3H4LA 1H7SA 2V34A 2UUBE 4LF9I 4K0KI 1H72C 1IBKI 3LPSA 1N36E 1FWKA 2R42A 1FJGI 4B3SE 3ZKBA 1KVKA 4DV2I 4JI0I 3B78A 3OTOI 1N32E 4LFAI 4XTJA 1B63A 1Z5CA 4DPTA 1ZM3A 1B62A 3ZKDA 2HK3A 4R1FA 1RR9A 1PIEA 1Z59A 4LF4E 3ZZTA 4KHPI 1A6FA 1N33I 4EMDA 4URLA 4X64I 4P7AA 2VQEE 4DR5E 2J7KA 4JI5E 1ZXMA 4JI2E 1HNWI 4DV1I 2E5LE 4JI8I 4GKKE 4LF7E 1IBLE 1WUUA 3ZZUA 3T1YI 4HACA 5LMUE 2V8PA 1EA6A 4B3RE 1OJ4A 4JI6I 1XNRE 2LJPA 4P52A 2ZM6E 2HK2A 4NXME 2VQFE 5A2QC 4PRXA 1J5EI 5A2QQ 1S4EA 1NHJA 2UU9E 3GONA 4X66E 4DR2I 1NHHA 5IWAI 3HULA 2UXCI 1HR0I 4WUCA 2V2QA 4USKA 1I94E 4DR1E 4HYMA 4OX9I 2V2ZA 1IBMI 4DPUA 5LL6R 1D6TA 3QT8A 4LF8I 1DARA 3J81C 1XMOE 4DR7E 3WU4A 4HY1A 1EI1A 3J81Q 4DUYE 1HNZI 4B3ME 4ED4A 3ZZ0A 4LFCI 1VISA 1ZXNA 4PU9A 2DEJA 2BM0A 4DPYA 4DV0I 4RPFA 4LF9E 3WU5A 4K0KE 2UXDI 4DR3I 1FJGE 1XHKA 2UXBI 2UUCI 4DUZI 4X65I 4FWDA 3T1HI 4DV2E 4FWGA 4JI0E 2UUBI 4DPWA 4LFAE 1N36I 3PYFA 1K47A 4B3SI 3CWVA 4MYTA 2BV3A 4Z7YA 4DU8A 3Q1QA 1KTVA 4DV5E 4YHHE 4DV3E 4LFBI 2NPFA 3LTOA 1ZM4A 3J7AG 4DV7I 3J80C 4KHPE 1N33E 3J80Q 4X64E 2X36A 1U2RA 5BR8I
chains in the Genus database with same CATH superfamily
3LNUA 4IFDD 4DV1E 4JI8E 2O1TA 3F0NA 3PS1A 4LF5I 4HXZA 3T1YE 4I3HA 1Z0EA 3Q6NA 4OO1F 3B8HA 4WUDA 5FLXC 5K36D 4JYAE 4DXLA 2HHHI 2PNLA 3KRNA 4JI6E 5FLXQ 1FWLA 5C0XB 4X62I 1BKNA 1MU5A 2VF3A 5EKWA 3U1YA 4LF6I 1ZM9A 3PS3A 4DR4I 4JI3I 5LMUI 1J5EE 1N34E 3NZKA 5LMNI 2Q2EB 4B3RI 1ELOA 4IZKB 2OI2A 2AJ4A 2HKJA 4JI7I 3PYDA 1Y4UA 4NXMI 4DR6E 4IFDF 1Z0CA 4BA2B 1HK7A 2ZITA 2HFUA 5DNLA 2V2VA 5IWAE 4DV4I 5K36F 2UXCE 2JEAB 4N3OA 4DPXA 2NN6B 5GMDA 1HR0E 2UU9I 4JV5I 4DV6E 1H7UA 1NZ0A 3DD6A 1H73A 2A2CA 4FN5A 4BA1A 4WUBA 5ELWA 1PVGA 4OX9E 2Z5BB 5L3JA 1XNQI 4JI4E 4AQYI 2GS8A 1IBME 2O1UA 4GKJI 2WNRB 2XEXA 4YY3I 2BM1A 3JAMC 4OO1E 1HNZE 1I94I 4JI1I 3P3CA 4NXNE 4DU7A 4LFCE 5DRRA 5JEAA 2UUAI 1NHIA 4Z7CA 2C39B 3QT5A 4B3TI 1E3HA 1OYPA 1XMQI 4UT4A 2PO2A 4DV0E 4DR7I 3ZM7A 4AIDA 3B82A 1IBKE 3P76A 2UXDE 1YH8A 2X7IA 1Y5YA 2F4VI 1HNXI 4DR3E 2UXBE 2UUCE 1ZM2A 1Z5AA 3PYGA 4DUZE 2JEBA 4X65E 1Z0VA 3T1HE 4MU3A 4IFDE 3D4JA 3P3EA 3OTOE 1QZRA 2GQ0A 3V5RA 5K36E 3M7ND 1Z0TA 3WU6A 4KQVA 2BA0G 4QNKA 4LFBE 1N32I 1MX0A 4ISAA 3PYEA 4DV7E 1UDSA 1UEKA 4FW9A 1MG7A 1FNMA 4DV5I 2CGEA 3M6AA 5IT9C 5C0XA 4MU1A 2Z5CB 1UDOA 4YHHI 4DV3I 3V2UC 4AIMA 2JT2A 2GO3A 5IT9Q 2R3VA 4MYUA 1HNWE 2IOQA 5BR8E 4LF4I 2PO1B 4MU4A 3K17A 4U3DA 4LF5E 4IZKA 1RREA 2C37B 2VQEI 4DR5I 1N0UA 2PNMA 4JI5I 4USMA 2HHHE 4BA2A 4JI2I 2ZBKB 2DEIA 2E5LI 4GKKI 4AM3A 4LF7I 1IBLI 4X62E 4LF6E 4LCGA 2EFGA 2JEAA 2JE6B 2NN6A 4DR4E 4LPFA 1KKHA 4JI3E 5LMNE 1XNRI 4JYAI 1OYSA 3WU3A 3Q6MA 2ZM6I 5DNXA 1N0VC 2WP8B 4FWHA 4JI7E 2Z5BA 1Z0GA 4IZJB 3QT6A 2VQFI 4DR2E 2WNRA 1FI4A 1N34I 3QT7A 4DV4E 4OO1B 4M1KA 4HACB 3K1JA 4JV5E 4J3DA 1USUA 4ZVIA 4X66I 2C39A 1H74A 2A2DA 2IERA 4DR6I 1KIJA 5C0XC 1XNQE 4LF8E 4LCFA 4AQYE 4GKJE 1USVA 4DV6I 2WW4A 4YY3E 4DR1I 1PKPA 1Z0BA 2IESA 4LOMA 3JAMQ 4JI1E 1Z0WA 4IFDB 5GMEA 1S16A 5DRPA 2O1VA 2J65A 4JI4I 2AE8A 2UUAE 1XMOI 1Z5BA 4B3TE 1XMQE 2F1DA 5K36B 1OYRA 1FKAE 2HFSA 4PRVA 4DUYI 2E1RA 2HKEA 4B3MI 4GQUA 5FWKA 2NN6C 3L7ZB 4NXNI 2F4VE 1HNXE 2IOPA 4JG4A 3J7AM 2CZ9A 4UTGA 2C38B 3H4LA 1H7SA 2V34A 1E3PA 2UUBE 1UDNA 5C0XD 4LF9I 4K0KI 3GMEA 1H72C 1IBKI 3LPSA 1N36E 1FWKA 2R42A 2BA0D 3PRYA 1FJGI 4B3SE 2Z5CA 3ZKBA 1KVKA 4DV2I 4JI0I 5DROA 2PO1A 3B78A 3OTOI 1N32E 4LFAI 4XTJA 1B63A 1Z5CA 4DPTA 2C37A 1ZM3A 1B62A 3ZKDA 3M85G 2HK3A 1XXEA 1VI7A 2NN6D 4R1FA 5C0XF 2O3ZA 4OKGA 1RR9A 1PIEA 2JE6A 1Z59A 5JEAC 4LF4E 3ZZTA 4KHPI 5DRQA 1A6FA 1N33I 2GO4A 4MU0A 3GLLA 4EMDA 1UDQA 1P42A 4URLA 2BR2B 4X64I 4P7AA 4FW7A 2WP8A 4FW4A 2BA1G 2VQEE 4IZJA 4DR5E 2J7KA 4JI5E 3P06A 1ZXMA 3HKMA 4JI2E 1HNWI 4DV1I 2E5LE 4JI8I 4OZEA 4GKKE 4LF7E 1IBLE 1WUUA 3ZZUA 3T1YI 4OO1A 4HACA 5LMUE 2V8PA 2NN6F 1EA6A 4B3RE 1OJ4A 4JI6I 1XNRE 2LJPA 4P52A 2ZM6E 2PO0B 2HK2A 4NXME 2VESA 2VQFE 2PNZB 5A2QC 4PRXA 1J5EI 4FW5A 2O1WA 5JEAD 5A2QQ 1S4EA 1NHJA 2UU9E 3GONA 4FW6A 4IFDA 4QNJA 2CVEA 4X66E 3HJCA 4DR2I 5C0XE 1NHHA 2Z5EA 5IWAI 5K36A 3HULA 2UXCI 1HR0I 4WUCA 3L7ZA 2V2QA 1RHYA 4IS9A 4USKA 5EL9A 2C38A 1I94E 4DR1E 4HYMA 4FW3A 4OX9I 2V2ZA 1IBMI 4DPUA 3CDIA 5LL6R 5JEAF 3H1CA 1D6TA 3QT8A 4LF8I 1DARA 3J81C 1XMOE 4DR7E 3CDJA 3WU4A 3PS2A 1Y4SA 4HY1A 1EI1A 3J81Q 4DUYE 1HNZI 2NN6E 4U3BA 4B3ME 4OO1C 4ED4A 3ZZ0A 4LFCI 1VISA 1ZXNA 4PU9A 2DEJA 4MDTA 2BM0A 4DPYA 4BA1B 1Y60A 1YHCA 4RPFA 4DV0I 1R6LA 4LF9E 3WU5A 4K0KE 2UXDI 4DR3I 1FJGE 1XHKA 2UXBI 2UUCI 3B4TA 3GCMA 4DUZI 4X65I 4FWDA 3T1HI 4NBQA 4DV2E 4FWGA 4JI0E 3M85D 2UUBI 4IFDC 5JEAB 4LCHA 4DPWA 4IZJD 4LFAE 1N36I 2BR2A 3PYFA 1Y6ZA 2PO2B 1K47A 4MQYA 5K36C 4B3SI 3CWVA 4MYTA 2BV3A 4Z7YA 4DU8A 3Q1QA 1KTVA 4DV5E 4OO1D 4YHHE 4DV3E 4LFBI 2NPFA 3LTOA 3M7NG 2JEBB 1ZM4A 5JEAE 3J7AG 2BA1D 4DV7I 3K85A 3J80C 4KHPE 1N33E 2CG9A 3P3GA 1R6MA 3J80Q 4X64E 3U1KA 2PO0A 3UHMA 2X36A 2PNZA 1U2RA 5BR8I
chains in the Genus database with same CATH topology
3LNUA 4DV1E 4JI8E 2O1TA 3F0NA 4LF5I 4HXZA 3T1YE 4I3HA 1Z0EA 3Q6NA 3B8HA 4WUDA 5FLXC 4JYAE 4DXLA 2HHHI 2PNLA 4JI6E 5FLXQ 1FWLA 4X62I 1BKNA 1MU5A 2VF3A 4LF6I 1ZM9A 4DR4I 4JI3I 5LMUI 1J5EE 1N34E 5LMNI 2Q2EB 4B3RI 1ELOA 4IZKB 2OI2A 2AJ4A 2HKJA 4JI7I 3PYDA 1Y4UA 4NXMI 4DR6E 1Z0CA 1HK7A 2ZITA 2HFUA 2V2VA 5IWAE 4DV4I 2UXCE 4N3OA 4DPXA 1HR0E 5GMDA 2UU9I 4JV5I 4DV6E 1H7UA 1NZ0A 1H73A 2A2CA 4FN5A 4WUBA 1PVGA 4OX9E 2Z5BB 5L3JA 1XNQI 4JI4E 4AQYI 2GS8A 1IBME 2O1UA 4GKJI 2XEXA 4YY3I 2BM1A 3JAMC 1HNZE 1I94I 4JI1I 4NXNE 4DU7A 4LFCE 2UUAI 1NHIA 4Z7CA 3QT5A 4B3TI 1XMQI 4UT4A 4DV0E 4DR7I 3ZM7A 3B82A 1IBKE 2UXDE 2X7IA 2F4VI 1HNXI 4DR3E 2UXBE 2UUCE 1ZM2A 1Z5AA 3PYGA 4DUZE 4X65E 1Z0VA 3T1HE 3D4JA 3OTOE 1QZRA 2GQ0A 3V5RA 1Z0TA 3WU6A 4KQVA 4LFBE 1N32I 1MX0A 3PYEA 4DV7E 1UEKA 4FW9A 1MG7A 1FNMA 4DV5I 2CGEA 3M6AA 5IT9C 2Z5CB 4YHHI 4DV3I 3V2UC 5IT9Q 2R3VA 4MYUA 1HNWE 2IOQA 5BR8E 4LF4I 3K17A 4LF5E 4IZKA 1RREA 2VQEI 4DR5I 1N0UA 2PNMA 4JI5I 4USMA 2HHHE 4JI2I 2ZBKB 2DEIA 2E5LI 4GKKI 4LF7I 1IBLI 4X62E 4LF6E 2EFGA 4DR4E 1KKHA 4JI3E 5LMNE 1XNRI 4JYAI 3WU3A 3Q6MA 2ZM6I 1N0VC 4FWHA 4JI7E 2Z5BA 1Z0GA 4IZJB 3QT6A 2VQFI 4DR2E 1FI4A 1N34I 3QT7A 4DV4E 4M1KA 4HACB 3K1JA 4JV5E 1USUA 4ZVIA 4X66I 4DR6I 1H74A 2A2DA 1KIJA 1XNQE 4LF8E 4AQYE 4GKJE 1USVA 4DV6I 2WW4A 4YY3E 4DR1I 1PKPA 1Z0BA 3JAMQ 4JI1E 1Z0WA 5GMEA 1S16A 2O1VA 4JI4I 2UUAE 1XMOI 1Z5BA 4B3TE 1XMQE 1FKAE 2HFSA 4PRVA 4DUYI 2E1RA 2HKEA 4B3MI 5FWKA 4NXNI 2F4VE 1HNXE 2IOPA 4JG4A 3J7AM 2CZ9A 4UTGA 3H4LA 1H7SA 2V34A 2UUBE 4LF9I 4K0KI 1H72C 1IBKI 3LPSA 1N36E 1FWKA 2R42A 3PRYA 1FJGI 4B3SE 2Z5CA 3ZKBA 1KVKA 4DV2I 4JI0I 3B78A 3OTOI 1N32E 4LFAI 4XTJA 1B63A 1Z5CA 4DPTA 1ZM3A 1B62A 3ZKDA 2HK3A 4R1FA 1RR9A 1PIEA 1Z59A 4LF4E 3ZZTA 4KHPI 1A6FA 1N33I 4EMDA 4URLA 4X64I 4P7AA 2VQEE 4IZJA 4DR5E 2J7KA 4JI5E 3P06A 1ZXMA 4JI2E 1HNWI 4DV1I 2E5LE 4JI8I 4GKKE 4LF7E 1IBLE 1WUUA 3ZZUA 3T1YI 4HACA 5LMUE 2V8PA 1EA6A 4B3RE 1OJ4A 4JI6I 1XNRE 2LJPA 4P52A 2ZM6E 2HK2A 4NXME 2VQFE 5A2QC 4PRXA 1J5EI 2O1WA 5A2QQ 1S4EA 1NHJA 2UU9E 3GONA 4X66E 3HJCA 4DR2I 1NHHA 2Z5EA 5IWAI 3HULA 2UXCI 1HR0I 4WUCA 2V2QA 4USKA 1I94E 4DR1E 4HYMA 4OX9I 2V2ZA 1IBMI 4DPUA 5LL6R 1D6TA 3QT8A 4LF8I 1DARA 3J81C 1XMOE 4DR7E 3WU4A 1Y4SA 4HY1A 1EI1A 3J81Q 4DUYE 1HNZI 4B3ME 4ED4A 3ZZ0A 4LFCI 1VISA 1ZXNA 4PU9A 2DEJA 2BM0A 4DPYA 4DV0I 4RPFA 4LF9E 3WU5A 4K0KE 2UXDI 4DR3I 1FJGE 1XHKA 2UXBI 2UUCI 4DUZI 4X65I 4FWDA 3T1HI 4DV2E 4FWGA 4JI0E 2UUBI 4DPWA 4IZJD 4LFAE 1N36I 3PYFA 1Y6ZA 1K47A 4B3SI 3CWVA 4MYTA 2BV3A 4Z7YA 4DU8A 3Q1QA 1KTVA 4DV5E 4YHHE 4DV3E 4LFBI 2NPFA 3LTOA 1ZM4A 3J7AG 4DV7I 3K85A 3J80C 4KHPE 1N33E 2CG9A 3J80Q 4X64E 2X36A 1U2RA 5BR8I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LNU A;  4DV1 E;  4JI8 E;  3F0N A;  4LF5 I;  4HXZ A;  3T1Y E;  4I3H A;  1Z0E A;  3B8H A;  4WUD A;  5FLX C;  4JYA E;  4DXL A;  2HHH I;  4JI6 E;  5FLX Q;  1FWL A;  4X62 I;  1BKN A;  1MU5 A;  2VF3 A;  4LF6 I;  1ZM9 A;  4DR4 I;  4JI3 I;  5LMU I;  1J5E E;  1N34 E;  5LMN I;  2Q2E B;  4B3R I;  1ELO A;  2OI2 A;  2AJ4 A;  2HKJ A;  4JI7 I;  3PYD A;  4NXM I;  4DR6 E;  1Z0C A;  2ZIT A;  2HFU A;  2V2V A;  5IWA E;  4DV4 I;  2UXC E;  4DPX A;  1HR0 E;  5GMD A;  2UU9 I;  4JV5 I;  4DV6 E;  1H7U A;  1NZ0 A;  1H73 A;  2A2C A;  4FN5 A;  4WUB A;  1PVG A;  4OX9 E;  5L3J A;  1XNQ I;  4JI4 E;  4AQY I;  2GS8 A;  1IBM E;  4GKJ I;  2XEX A;  4YY3 I;  2BM1 A;  3JAM C;  1HNZ E;  1I94 I;  4JI1 I;  4NXN E;  4DU7 A;  4LFC E;  2UUA I;  1NHI A;  4Z7C A;  4B3T I;  3QT5 A;  1XMQ I;  4UT4 A;  4DV0 E;  4DR7 I;  3ZM7 A;  3B82 A;  1IBK E;  2UXD E;  2X7I A;  2F4V I;  1HNX I;  4DR3 E;  2UXB E;  2UUC E;  1ZM2 A;  1Z5A A;  3PYG A;  4DUZ E;  4X65 E;  1Z0V A;  3T1H E;  3D4J A;  3OTO E;  1QZR A;  3V5R A;  1Z0T A;  3WU6 A;  4KQV A;  4LFB E;  1N32 I;  1MX0 A;  3PYE A;  4DV7 E;  1UEK A;  4FW9 A;  1MG7 A;  1FNM A;  4DV5 I;  3M6A A;  5IT9 C;  4YHH I;  4DV3 I;  3V2U C;  5IT9 Q;  2R3V A;  4MYU A;  1HNW E;  5BR8 E;  4LF4 I;  3K17 A;  4LF5 E;  1RRE A;  2VQE I;  4DR5 I;  1N0U A;  4JI5 I;  4USM A;  2HHH E;  4JI2 I;  2ZBK B;  2DEI A;  2E5L I;  4GKK I;  4LF7 I;  1IBL I;  4X62 E;  4LF6 E;  2EFG A;  4DR4 E;  1KKH A;  4JI3 E;  5LMN E;  1XNR I;  4JYA I;  3WU3 A;  2ZM6 I;  1N0V C;  4FWH A;  4JI7 E;  1Z0G A;  3QT6 A;  2VQF I;  4DR2 E;  1FI4 A;  1N34 I;  3QT7 A;  4DV4 E;  4M1K A;  4HAC B;  3K1J A;  4JV5 E;  4ZVI A;  4X66 I;  4DR6 I;  1H74 A;  2A2D A;  1KIJ A;  1XNQ E;  4LF8 E;  4AQY E;  4GKJ E;  4DV6 I;  2WW4 A;  4YY3 E;  4DR1 I;  1PKP A;  1Z0B A;  3JAM Q;  4JI1 E;  1Z0W A;  5GME A;  1S16 A;  4JI4 I;  2UUA E;  1XMO I;  1Z5B A;  4B3T E;  1XMQ E;  1FKA E;  2HFS A;  4PRV A;  4DUY I;  2E1R A;  2HKE A;  4B3M I;  4NXN I;  2F4V E;  1HNX E;  4JG4 A;  3J7A M;  2CZ9 A;  4UTG A;  3H4L A;  1H7S A;  2V34 A;  2UUB E;  4LF9 I;  4K0K I;  1H72 C;  1IBK I;  3LPS A;  1N36 E;  1FWK A;  2R42 A;  1FJG I;  4B3S E;  3ZKB A;  1KVK A;  4DV2 I;  4JI0 I;  3B78 A;  3OTO I;  1N32 E;  4LFA I;  4XTJ A;  1B63 A;  1Z5C A;  4DPT A;  1ZM3 A;  1B62 A;  3ZKD A;  2HK3 A;  4R1F A;  1RR9 A;  1PIE A;  1Z59 A;  4LF4 E;  3ZZT A;  4KHP I;  1A6F A;  1N33 I;  4EMD A;  4URL A;  4X64 I;  4P7A A;  2VQE E;  4DR5 E;  2J7K A;  4JI5 E;  1ZXM A;  4JI2 E;  1HNW I;  4DV1 I;  2E5L E;  4JI8 I;  4GKK E;  4LF7 E;  1IBL E;  1WUU A;  3ZZU A;  3T1Y I;  4HAC A;  5LMU E;  2V8P A;  1EA6 A;  4B3R E;  1OJ4 A;  4JI6 I;  1XNR E;  2LJP A;  4P52 A;  2ZM6 E;  2HK2 A;  4NXM E;  2VQF E;  5A2Q C;  4PRX A;  1J5E I;  5A2Q Q;  1S4E A;  1NHJ A;  2UU9 E;  3GON A;  4X66 E;  4DR2 I;  1NHH A;  5IWA I;  3HUL A;  2UXC I;  1HR0 I;  4WUC A;  2V2Q A;  4USK A;  1I94 E;  4DR1 E;  4HYM A;  4OX9 I;  2V2Z A;  1IBM I;  4DPU A;  5LL6 R;  1D6T A;  3QT8 A;  4LF8 I;  1DAR A;  3J81 C;  1XMO E;  4DR7 E;  3WU4 A;  4HY1 A;  1EI1 A;  3J81 Q;  4DUY E;  1HNZ I;  4B3M E;  4ED4 A;  3ZZ0 A;  4LFC I;  1VIS A;  1ZXN A;  4PU9 A;  2DEJ A;  2BM0 A;  4DPY A;  4DV0 I;  4RPF A;  4LF9 E;  3WU5 A;  4K0K E;  2UXD I;  4DR3 I;  1FJG E;  1XHK A;  2UXB I;  2UUC I;  4DUZ I;  4X65 I;  4FWD A;  3T1H I;  4DV2 E;  4FWG A;  4JI0 E;  2UUB I;  4DPW A;  4LFA E;  1N36 I;  3PYF A;  1K47 A;  4B3S I;  3CWV A;  4MYT A;  2BV3 A;  4Z7Y A;  4DU8 A;  3Q1Q A;  1KTV A;  4DV5 E;  4YHH E;  4DV3 E;  4LFB I;  2NPF A;  3LTO A;  1ZM4 A;  3J7A G;  4DV7 I;  3J80 C;  4KHP E;  1N33 E;  3J80 Q;  4X64 E;  2X36 A;  1U2R A;  5BR8 I; 
#chains in the Genus database with same CATH topology
 3LNU A;  4IFD D;  4DV1 E;  4JI8 E;  2O1T A;  3F0N A;  3PS1 A;  4LF5 I;  4HXZ A;  3T1Y E;  4I3H A;  1Z0E A;  3Q6N A;  4OO1 F;  3B8H A;  4WUD A;  5FLX C;  5K36 D;  4JYA E;  4DXL A;  2HHH I;  2PNL A;  3KRN A;  4JI6 E;  5FLX Q;  1FWL A;  5C0X B;  4X62 I;  1BKN A;  1MU5 A;  2VF3 A;  5EKW A;  3U1Y A;  4LF6 I;  1ZM9 A;  3PS3 A;  4DR4 I;  4JI3 I;  5LMU I;  1J5E E;  1N34 E;  3NZK A;  5LMN I;  2Q2E B;  4B3R I;  1ELO A;  4IZK B;  2OI2 A;  2AJ4 A;  2HKJ A;  4JI7 I;  3PYD A;  1Y4U A;  4NXM I;  4DR6 E;  4IFD F;  1Z0C A;  4BA2 B;  1HK7 A;  2ZIT A;  2HFU A;  5DNL A;  2V2V A;  5IWA E;  4DV4 I;  5K36 F;  2UXC E;  2JEA B;  4N3O A;  4DPX A;  2NN6 B;  5GMD A;  1HR0 E;  2UU9 I;  4JV5 I;  4DV6 E;  1H7U A;  1NZ0 A;  3DD6 A;  1H73 A;  2A2C A;  4FN5 A;  4BA1 A;  4WUB A;  5ELW A;  1PVG A;  4OX9 E;  2Z5B B;  5L3J A;  1XNQ I;  4JI4 E;  4AQY I;  2GS8 A;  1IBM E;  2O1U A;  4GKJ I;  2WNR B;  2XEX A;  4YY3 I;  2BM1 A;  3JAM C;  4OO1 E;  1HNZ E;  1I94 I;  4JI1 I;  3P3C A;  4NXN E;  4DU7 A;  4LFC E;  5DRR A;  5JEA A;  2UUA I;  1NHI A;  4Z7C A;  2C39 B;  3QT5 A;  4B3T I;  1E3H A;  1OYP A;  1XMQ I;  4UT4 A;  2PO2 A;  4DV0 E;  4DR7 I;  3ZM7 A;  4AID A;  3B82 A;  1IBK E;  3P76 A;  2UXD E;  1YH8 A;  2X7I A;  1Y5Y A;  2F4V I;  1HNX I;  4DR3 E;  2UXB E;  2UUC E;  1ZM2 A;  1Z5A A;  3PYG A;  4DUZ E;  2JEB A;  4X65 E;  1Z0V A;  3T1H E;  4MU3 A;  4IFD E;  3D4J A;  3P3E A;  3OTO E;  1QZR A;  2GQ0 A;  3V5R A;  5K36 E;  3M7N D;  1Z0T A;  3WU6 A;  4KQV A;  2BA0 G;  4QNK A;  4LFB E;  1N32 I;  1MX0 A;  4ISA A;  3PYE A;  4DV7 E;  1UDS A;  1UEK A;  4FW9 A;  1MG7 A;  1FNM A;  4DV5 I;  2CGE A;  3M6A A;  5IT9 C;  5C0X A;  4MU1 A;  2Z5C B;  1UDO A;  4YHH I;  4DV3 I;  3V2U C;  4AIM A;  2JT2 A;  2GO3 A;  5IT9 Q;  2R3V A;  4MYU A;  1HNW E;  2IOQ A;  5BR8 E;  4LF4 I;  2PO1 B;  4MU4 A;  3K17 A;  4U3D A;  4LF5 E;  4IZK A;  1RRE A;  2C37 B;  2VQE I;  4DR5 I;  1N0U A;  2PNM A;  4JI5 I;  4USM A;  2HHH E;  4BA2 A;  4JI2 I;  2ZBK B;  2DEI A;  2E5L I;  4GKK I;  4AM3 A;  4LF7 I;  1IBL I;  4X62 E;  4LF6 E;  4LCG A;  2EFG A;  2JEA A;  2JE6 B;  2NN6 A;  4DR4 E;  4LPF A;  1KKH A;  4JI3 E;  5LMN E;  1XNR I;  4JYA I;  1OYS A;  3WU3 A;  3Q6M A;  2ZM6 I;  5DNX A;  1N0V C;  2WP8 B;  4FWH A;  4JI7 E;  2Z5B A;  1Z0G A;  4IZJ B;  3QT6 A;  2VQF I;  4DR2 E;  2WNR A;  1FI4 A;  1N34 I;  3QT7 A;  4DV4 E;  4OO1 B;  4M1K A;  4HAC B;  3K1J A;  4JV5 E;  4J3D A;  1USU A;  4ZVI A;  4X66 I;  2C39 A;  1H74 A;  2A2D A;  2IER A;  4DR6 I;  1KIJ A;  5C0X C;  1XNQ E;  4LF8 E;  4LCF A;  4AQY E;  4GKJ E;  1USV A;  4DV6 I;  2WW4 A;  4YY3 E;  4DR1 I;  1PKP A;  1Z0B A;  2IES A;  4LOM A;  3JAM Q;  4JI1 E;  1Z0W A;  4IFD B;  5GME A;  1S16 A;  5DRP A;  2O1V A;  2J65 A;  4JI4 I;  2AE8 A;  2UUA E;  1XMO I;  1Z5B A;  4B3T E;  1XMQ E;  2F1D A;  5K36 B;  1OYR A;  1FKA E;  2HFS A;  4PRV A;  4DUY I;  2E1R A;  2HKE A;  4B3M I;  4GQU A;  5FWK A;  2NN6 C;  3L7Z B;  4NXN I;  2F4V E;  1HNX E;  2IOP A;  4JG4 A;  3J7A M;  2CZ9 A;  4UTG A;  2C38 B;  3H4L A;  1H7S A;  2V34 A;  1E3P A;  2UUB E;  1UDN A;  5C0X D;  4LF9 I;  4K0K I;  3GME A;  1H72 C;  1IBK I;  3LPS A;  1N36 E;  1FWK A;  2R42 A;  2BA0 D;  3PRY A;  1FJG I;  4B3S E;  2Z5C A;  3ZKB A;  1KVK A;  4DV2 I;  4JI0 I;  5DRO A;  2PO1 A;  3B78 A;  3OTO I;  1N32 E;  4LFA I;  4XTJ A;  1B63 A;  1Z5C A;  4DPT A;  2C37 A;  1ZM3 A;  1B62 A;  3ZKD A;  3M85 G;  2HK3 A;  1XXE A;  1VI7 A;  2NN6 D;  4R1F A;  5C0X F;  2O3Z A;  4OKG A;  1RR9 A;  1PIE A;  2JE6 A;  1Z59 A;  5JEA C;  4LF4 E;  3ZZT A;  4KHP I;  5DRQ A;  1A6F A;  1N33 I;  2GO4 A;  4MU0 A;  3GLL A;  4EMD A;  1UDQ A;  1P42 A;  4URL A;  2BR2 B;  4X64 I;  4P7A A;  4FW7 A;  2WP8 A;  4FW4 A;  2BA1 G;  2VQE E;  4IZJ A;  4DR5 E;  2J7K A;  4JI5 E;  3P06 A;  1ZXM A;  3HKM A;  4JI2 E;  1HNW I;  4DV1 I;  2E5L E;  4JI8 I;  4OZE A;  4GKK E;  4LF7 E;  1IBL E;  1WUU A;  3ZZU A;  3T1Y I;  4OO1 A;  4HAC A;  5LMU E;  2V8P A;  2NN6 F;  1EA6 A;  4B3R E;  1OJ4 A;  4JI6 I;  1XNR E;  2LJP A;  4P52 A;  2ZM6 E;  2PO0 B;  2HK2 A;  4NXM E;  2VES A;  2VQF E;  2PNZ B;  5A2Q C;  4PRX A;  1J5E I;  4FW5 A;  2O1W A;  5JEA D;  5A2Q Q;  1S4E A;  1NHJ A;  2UU9 E;  3GON A;  4FW6 A;  4IFD A;  4QNJ A;  2CVE A;  4X66 E;  3HJC A;  4DR2 I;  5C0X E;  1NHH A;  2Z5E A;  5IWA I;  5K36 A;  3HUL A;  2UXC I;  1HR0 I;  4WUC A;  3L7Z A;  2V2Q A;  1RHY A;  4IS9 A;  4USK A;  5EL9 A;  2C38 A;  1I94 E;  4DR1 E;  4HYM A;  4FW3 A;  4OX9 I;  2V2Z A;  1IBM I;  4DPU A;  3CDI A;  5LL6 R;  5JEA F;  3H1C A;  1D6T A;  3QT8 A;  4LF8 I;  1DAR A;  3J81 C;  1XMO E;  4DR7 E;  3CDJ A;  3WU4 A;  3PS2 A;  1Y4S A;  4HY1 A;  1EI1 A;  3J81 Q;  4DUY E;  1HNZ I;  2NN6 E;  4U3B A;  4B3M E;  4OO1 C;  4ED4 A;  3ZZ0 A;  4LFC I;  1VIS A;  1ZXN A;  4PU9 A;  2DEJ A;  4MDT A;  2BM0 A;  4DPY A;  4BA1 B;  1Y60 A;  1YHC A;  4RPF A;  4DV0 I;  1R6L A;  4LF9 E;  3WU5 A;  4K0K E;  2UXD I;  4DR3 I;  1FJG E;  1XHK A;  2UXB I;  2UUC I;  3B4T A;  3GCM A;  4DUZ I;  4X65 I;  4FWD A;  3T1H I;  4NBQ A;  4DV2 E;  4FWG A;  4JI0 E;  3M85 D;  2UUB I;  4IFD C;  5JEA B;  4LCH A;  4DPW A;  4IZJ D;  4LFA E;  1N36 I;  2BR2 A;  3PYF A;  1Y6Z A;  2PO2 B;  1K47 A;  4MQY A;  5K36 C;  4B3S I;  3CWV A;  4MYT A;  2BV3 A;  4Z7Y A;  4DU8 A;  3Q1Q A;  1KTV A;  4DV5 E;  4OO1 D;  4YHH E;  4DV3 E;  4LFB I;  2NPF A;  3LTO A;  3M7N G;  2JEB B;  1ZM4 A;  5JEA E;  3J7A G;  2BA1 D;  4DV7 I;  3K85 A;  3J80 C;  4KHP E;  1N33 E;  2CG9 A;  3P3G A;  1R6M A;  3J80 Q;  4X64 E;  3U1K A;  2PO0 A;  3UHM A;  2X36 A;  2PNZ A;  1U2R A;  5BR8 I; 
#chains in the Genus database with same CATH homology
 3LNU A;  4DV1 E;  4JI8 E;  2O1T A;  3F0N A;  4LF5 I;  4HXZ A;  3T1Y E;  4I3H A;  1Z0E A;  3Q6N A;  3B8H A;  4WUD A;  5FLX C;  4JYA E;  4DXL A;  2HHH I;  2PNL A;  4JI6 E;  5FLX Q;  1FWL A;  4X62 I;  1BKN A;  1MU5 A;  2VF3 A;  4LF6 I;  1ZM9 A;  4DR4 I;  4JI3 I;  5LMU I;  1J5E E;  1N34 E;  5LMN I;  2Q2E B;  4B3R I;  1ELO A;  4IZK B;  2OI2 A;  2AJ4 A;  2HKJ A;  4JI7 I;  3PYD A;  1Y4U A;  4NXM I;  4DR6 E;  1Z0C A;  1HK7 A;  2ZIT A;  2HFU A;  2V2V A;  5IWA E;  4DV4 I;  2UXC E;  4N3O A;  4DPX A;  1HR0 E;  5GMD A;  2UU9 I;  4JV5 I;  4DV6 E;  1H7U A;  1NZ0 A;  1H73 A;  2A2C A;  4FN5 A;  4WUB A;  1PVG A;  4OX9 E;  2Z5B B;  5L3J A;  1XNQ I;  4JI4 E;  4AQY I;  2GS8 A;  1IBM E;  2O1U A;  4GKJ I;  2XEX A;  4YY3 I;  2BM1 A;  3JAM C;  1HNZ E;  1I94 I;  4JI1 I;  4NXN E;  4DU7 A;  4LFC E;  2UUA I;  1NHI A;  4Z7C A;  3QT5 A;  4B3T I;  1XMQ I;  4UT4 A;  4DV0 E;  4DR7 I;  3ZM7 A;  3B82 A;  1IBK E;  2UXD E;  2X7I A;  2F4V I;  1HNX I;  4DR3 E;  2UXB E;  2UUC E;  1ZM2 A;  1Z5A A;  3PYG A;  4DUZ E;  4X65 E;  1Z0V A;  3T1H E;  3D4J A;  3OTO E;  1QZR A;  2GQ0 A;  3V5R A;  1Z0T A;  3WU6 A;  4KQV A;  4LFB E;  1N32 I;  1MX0 A;  3PYE A;  4DV7 E;  1UEK A;  4FW9 A;  1MG7 A;  1FNM A;  4DV5 I;  2CGE A;  3M6A A;  5IT9 C;  2Z5C B;  4YHH I;  4DV3 I;  3V2U C;  5IT9 Q;  2R3V A;  4MYU A;  1HNW E;  2IOQ A;  5BR8 E;  4LF4 I;  3K17 A;  4LF5 E;  4IZK A;  1RRE A;  2VQE I;  4DR5 I;  1N0U A;  2PNM A;  4JI5 I;  4USM A;  2HHH E;  4JI2 I;  2ZBK B;  2DEI A;  2E5L I;  4GKK I;  4LF7 I;  1IBL I;  4X62 E;  4LF6 E;  2EFG A;  4DR4 E;  1KKH A;  4JI3 E;  5LMN E;  1XNR I;  4JYA I;  3WU3 A;  3Q6M A;  2ZM6 I;  1N0V C;  4FWH A;  4JI7 E;  2Z5B A;  1Z0G A;  4IZJ B;  3QT6 A;  2VQF I;  4DR2 E;  1FI4 A;  1N34 I;  3QT7 A;  4DV4 E;  4M1K A;  4HAC B;  3K1J A;  4JV5 E;  1USU A;  4ZVI A;  4X66 I;  4DR6 I;  1H74 A;  2A2D A;  1KIJ A;  1XNQ E;  4LF8 E;  4AQY E;  4GKJ E;  1USV A;  4DV6 I;  2WW4 A;  4YY3 E;  4DR1 I;  1PKP A;  1Z0B A;  3JAM Q;  4JI1 E;  1Z0W A;  5GME A;  1S16 A;  2O1V A;  4JI4 I;  2UUA E;  1XMO I;  1Z5B A;  4B3T E;  1XMQ E;  1FKA E;  2HFS A;  4PRV A;  4DUY I;  2E1R A;  2HKE A;  4B3M I;  5FWK A;  4NXN I;  2F4V E;  1HNX E;  2IOP A;  4JG4 A;  3J7A M;  2CZ9 A;  4UTG A;  3H4L A;  1H7S A;  2V34 A;  2UUB E;  4LF9 I;  4K0K I;  1H72 C;  1IBK I;  3LPS A;  1N36 E;  1FWK A;  2R42 A;  3PRY A;  1FJG I;  4B3S E;  2Z5C A;  3ZKB A;  1KVK A;  4DV2 I;  4JI0 I;  3B78 A;  3OTO I;  1N32 E;  4LFA I;  4XTJ A;  1B63 A;  1Z5C A;  4DPT A;  1ZM3 A;  1B62 A;  3ZKD A;  2HK3 A;  4R1F A;  1RR9 A;  1PIE A;  1Z59 A;  4LF4 E;  3ZZT A;  4KHP I;  1A6F A;  1N33 I;  4EMD A;  4URL A;  4X64 I;  4P7A A;  2VQE E;  4IZJ A;  4DR5 E;  2J7K A;  4JI5 E;  3P06 A;  1ZXM A;  4JI2 E;  1HNW I;  4DV1 I;  2E5L E;  4JI8 I;  4GKK E;  4LF7 E;  1IBL E;  1WUU A;  3ZZU A;  3T1Y I;  4HAC A;  5LMU E;  2V8P A;  1EA6 A;  4B3R E;  1OJ4 A;  4JI6 I;  1XNR E;  2LJP A;  4P52 A;  2ZM6 E;  2HK2 A;  4NXM E;  2VQF E;  5A2Q C;  4PRX A;  1J5E I;  2O1W A;  5A2Q Q;  1S4E A;  1NHJ A;  2UU9 E;  3GON A;  4X66 E;  3HJC A;  4DR2 I;  1NHH A;  2Z5E A;  5IWA I;  3HUL A;  2UXC I;  1HR0 I;  4WUC A;  2V2Q A;  4USK A;  1I94 E;  4DR1 E;  4HYM A;  4OX9 I;  2V2Z A;  1IBM I;  4DPU A;  5LL6 R;  1D6T A;  3QT8 A;  4LF8 I;  1DAR A;  3J81 C;  1XMO E;  4DR7 E;  3WU4 A;  1Y4S A;  4HY1 A;  1EI1 A;  3J81 Q;  4DUY E;  1HNZ I;  4B3M E;  4ED4 A;  3ZZ0 A;  4LFC I;  1VIS A;  1ZXN A;  4PU9 A;  2DEJ A;  2BM0 A;  4DPY A;  4DV0 I;  4RPF A;  4LF9 E;  3WU5 A;  4K0K E;  2UXD I;  4DR3 I;  1FJG E;  1XHK A;  2UXB I;  2UUC I;  4DUZ I;  4X65 I;  4FWD A;  3T1H I;  4DV2 E;  4FWG A;  4JI0 E;  2UUB I;  4DPW A;  4IZJ D;  4LFA E;  1N36 I;  3PYF A;  1Y6Z A;  1K47 A;  4B3S I;  3CWV A;  4MYT A;  2BV3 A;  4Z7Y A;  4DU8 A;  3Q1Q A;  1KTV A;  4DV5 E;  4YHH E;  4DV3 E;  4LFB I;  2NPF A;  3LTO A;  1ZM4 A;  3J7A G;  4DV7 I;  3K85 A;  3J80 C;  4KHP E;  1N33 E;  2CG9 A;  3J80 Q;  4X64 E;  2X36 A;  1U2R A;  5BR8 I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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