3GTJI

Backtracked rna polymerase ii complex with 13mer rna
Total Genus 10

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYTIV1 (7-10)S1 (18-19)TI1 (20-23)S2 (24-28)TIV4 (29-32)S3 (35-37)TIV5 (30-33)O1 (90-92)TIV6 (47-50)TIV12 (103-106)TIV8 (59-62)TI2 (61-64)TI3 (65-68)TIV10 (75-78)TIV13 (104-107)S6 (108-111)S5 (99-103)TIV3 (19-22)TIV7 (51-54)TIV11 (76-79)S4 (83-87)Updating...
connected with : NaN
molecule tags Transcription, transferase/dna-rna hybrid
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 10
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3gtjI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3gtjI02
3I4NI 3S1NI 2KPIA 5FLMI 4A3DI 1ML8A 1Y1VS 1L1OC 2NVTI 4MH4A 2JA6I 1PFTA 1TFIA 2E2II 1ZB9A 1TWHI 5C44I 2BJOA 2JR6A 3S1QI 2JA7I 3HOUI 4Y52I 5CM2M 2NVXI 1K83I 1I3QI 3M4OI 3S15I 3PO2I 5IP9I 2HF1A 4NB8A 4A3CI 2E2HI 5IP7I 4A3KI 1R9TI 4X6AI 4NBEA 3HOXI 1WW9A 4NBGA 3GTMS 3HOZI 1USPA 5C4XI 5C3EI 1Y1VI 3S1RI 2JA5I 1TWAI 2YU9I 1I50I 4A3LI 3U50C 2DE5A 3S2DI 4A3II 4NBHA 4A3MI 4NBDA 3VMHA 4QTTA 2NVYI 1ZB8A 3VMIA 3GTPI 1Y1WI 1SFOI 2P3YA 4NBBA 3RZOI 3K7AI 3LUSA 3GTGI 3HOVI 4BBRI 2J6AA 2F4MA 1N2FA 3S14I 3RZDI 4A3JI 2DE6A 1WCMI 2PK7A 1X3WA 4NOZA 4NBCA 4A3BI 3D6WA 3HOYI 3GTKI 3Q87A 2B63I 3GTMI 1USPB 2E2JI 1LQLA 3GTJI 3S17I 3VMGA 3S2HI 4BXXI 3VB9A 2R7ZI 1DL6A 1X3ZA 2RBLA 2DE7A 3FKII 4QTUA 2AKLA 3HOWI 3PO3S 3CQZI 3GKQA 3GTLI 3M3YI 2JS4A 4NBAA 3I4MI 4NB9A 3GCFA 4A3GI 3EERA 1NUIA 4Y7NI 4BBSI 4BY1I 1TWCI 3H0GI 4NBFA 2R93I 1QYPA 3ESWA 1VLAA 3H3VJ 2K5RA 2F4OA 1I6HI 4A3EI 3S16I 4XX2A 1YUAA 4A3FI 1TWFI 3GTOI 1RLYA 3S1MI 1RO4A 3GTQI 1TWGI 2JNYA 2NVQI 4A93I 4BY7I 5C4JI 2VUMI 3I07A 3PO3I 2JA8I 2R92I
chains in the Genus database with same CATH superfamily
3TDHB 2NVTI 4MH4A 1YHQZ 1W2BZ 3CC4Z 2OOXB 2JMOA 5C44I 1QF8A 2JR6A 3CCJZ 1VQN1 1YJN1 3NDIA 3I551 1Q811 2JIPA 3G711 2OTL1 3CCR1 1VQ6Z 5FLXb 3IX0A 3JAMb 1JJ2Z 2RHBA 4NB8A 4A3CI 3TE5B 4A3KI 3T4NB 2V8JA 4X6AI 4NBEA 3HOXI 4S1TA 3HOZI 5T6BA 5C4XI 5C3EI 2QEXZ 2LIYA 1K731 2ZAEB 3J81b 1YJ9Z 3CD61 1NP6A 4A3MI 4RVGA 4NBDA 1S7MA 1SIWA 3VMHA 1NJI1 1AA6A 1Q861 1SFOI 1YJW1 4NBBA 3K7AI 2RIQA 2J6AA 1N2FA 3CC21 1WJ2A 3Q87A 1VQLZ 3GTMI 1VQ5Z 1USPB 1LQLA 4DQYB 1K9M2 2V8IA 4BXXI 3VB9A 3CC71 3PO3S 3CQZI 3BG1B 3KIFA 3MZLB 2V3VA 2P28A 3CMA1 4Y7NI 1QVGY 5T67A 3G6EZ 1QYPA 3HKZA 3ESWA 3CME1 1YI2Z 4A3EI 1VQ4Z 1N8R1 4EWCA 3S1MI 4MONA 1RO4A 4A93I 2OOYB 2OTJZ 2VUMI 3I56Z 1YIT1 2R92I 4A3DI 4MD9A 2E7ZA 2LEXA 3I4NI 2KPIA 1L1OC 1RO2A 2JA6I 3CCLZ 2E9HA 2E2II 1ZB9A 3NH8A 2QA4Z 3S1QI 2YADA 2JA7I 2JIOA 3CCQZ 4Y52I 1FDOA 2NVXI 1K83I 4E2XA 3CXCZ 2Q51A 1Z01A 3FQMA 3EEDA 3G4S1 5D1OB 2QR1B 1KQSZ 2W04A 3CCMZ 3VTNA 3IF8A 3CCS1 3GTMS 1USPA 2VPXA 1Y1VI 1FDIA 2LFUA 1KC82 4A3LI 1VQO1 3CCV1 4NH1C 4NBHA 2VUGA 1W2BY 1ZB8A 4E31A 2VPZA 1RO0A 1YIJZ 2P3YA 3HOVI 4BBRI 3RZDI 1WCMI 2PK7A 3D6WA 2IV2X 3HOYI 1VQ7Z 1P9NA 1JJ2Y 2E2JI 1VQP1 3GTJI 1JWHC 5IT9b 1X3ZA 2H85A 2RBLA 4QTUA 2AKLA 2V8KA 3GTLI 3CCE1 2JS4A 1Q822 2JUBA 4NBAA 4NB9A 1VQ9Z 3CMEZ 2RPRA 3EERA 3CCUZ 5A2Qf 1YUKA 1TWCI 3H0GI 4NBFA 1VLAA 2GTHA 3J80f 1M1K1 3S16I 1YHQ1 3CC41 1YUAA 1TWFI 3GTQI 2Y0SA 4HGZA 2K3RA 2JNYA 4MD7A 5D1OA 2NVQI 4BY7I 3MONA 3CCJ1 1Q812 1K8A1 5C4JI 3P5JB 3QWUA 2GTIA 3S1NI 1Y1VS 1VQ61 5T64A 3F3PC 2GU2A 4RVFA 1PFTA 1Q7Y1 1VQKZ 2PMZA 1S72Z 3FQQA 1TWHI 1VQMZ 2BJOA 4RVDA 1K732 2QEX1 1I3QI 1KD12 3M4OI 3S15I 3PO2I 5IP9I 2HF1A 1YJ91 3F3FC 1X0TA 3JAMf 1WW9A 2QRCB 5FLXf 1VQNZ 4RV9A 1YJNZ 3I55Z 3S1RI 2VPYA 3G71Z 2W03A 2OTLZ 1TWAI 2YU9I 3CCRZ 1I50I 3U50C 2DE5A 3OW2Z 1VQL1 4QTTA 4RVHA 1VQ51 2NVYI 3GTPI 1Y1WI 5A2Qb 3J81f 3LUSA 2F4MA 3S14I 2JIRA 3CPWZ 2G2KA 4CL1A 2DE6A 2NAPA 4NOZA 3CXCY 3GTKI 3CD6Z 1KQSY 2QLVB 4HH4A 3S17I 3S2HI 1YJWZ 2I3CA 1DL6A 2DE7A 3CC2Z 3HOWI 3G6E1 3KIHA 4E2YA 2V45A 1M902 1YI21 1Q16A 2IZ3A 2RT9A 1N8R2 1VQ81 1VQ41 3I4MI 1ZH1A 2QREB 3GCFA 1K9M1 4A3GI 4HGYA 2OTJ1 4E30A 4BBSI 3PO3I 2WB1A 3I561 3CC7Z 2K5RA 4E32A 3CCL1 1QVFZ 4XX2A 4A3FI 1RLYA 3CMAZ 2QA41 1WZNA 3NFZA 3CCQ1 3I07A 1QVFY 2JA8I 4MD8A 2EGTA 4E33A 4NFRA 5FLMI 1ML8A 2M48A 1TFIA 1RNIA 3CCM1 1KD11 3NH5A 1Y8CA 2WAQA 3HOUI 5CM2M 1YITZ 4TNUA 4DGLA 5D1PA 2E2HI 2IZ4A 3NH4A 1QXFA 5IP7I 1R9TI 2AYDA 1WIIA 4RS4A 2QRDB 1YIJ1 4NBGA 2HU9A 4E2ZA 2JA5I 2O53A 3G4SZ 3S2DI 1VQ71 4A3II 4E2WA 3VMIA 3J7A4 3BG0B 4DK1A 3CCSZ 3IR7A 2PM9A 3RZOI 1QVGZ 3GTGI 1NJI2 1Z03A 3MZKB 4A3JI 4NBCA 1Q862 1KC81 1X3WA 4A3BI 1VQOZ 4AYBA 3D2LA 4MXUA 1RQFA 3CCVZ 3NDJA 2B63I 1KRLA 2JIQA 1VQ91 2R6MA 3VMGA 1M901 2M6NA 3CCU1 2R7ZI 1VQ8Z 3FKII 3D9XA 3IFUA 2KI7B 5IT9f 3GKQA 3M3YI 1M1K2 3OW2Y 1VQPZ 2JIMA 2VF1A 1K8A2 1NUIA 3J80b 5LL6f 2Q4ZA 2O4HA 4BY1I 5AN9F 2R93I 3CCEZ 3CPWY 2VPWA 3H3VJ 1I6HI 2F4OA 1Q7Y2 2QKDA 1Q821 1VQK1 3GTOI 1S721 1TWGI 1Z02A 1VQM1 2OZKA 4MRIA
chains in the Genus database with same CATH topology
3TDHB 2NVTI 4MH4A 1YHQZ 1W2BZ 3CC4Z 2OOXB 2JMOA 5C44I 1QF8A 2JR6A 3CCJZ 1VQN1 1YJN1 3NDIA 3I551 1Q811 3G711 2OTL1 3CCR1 1VQ6Z 5FLXb 3IX0A 3JAMb 1JJ2Z 2RHBA 4NB8A 4A3CI 3TE5B 4A3KI 3T4NB 2V8JA 4X6AI 4NBEA 3HOXI 4S1TA 3HOZI 5T6BA 5C4XI 5C3EI 2QEXZ 2LIYA 1K731 2ZAEB 3J81b 1YJ9Z 3CD61 1NP6A 4A3MI 4RVGA 4NBDA 1S7MA 3VMHA 1NJI1 1Q861 1SFOI 1YJW1 4NBBA 3K7AI 2RIQA 2J6AA 1N2FA 3CC21 3Q87A 1VQLZ 3GTMI 1VQ5Z 1USPB 1LQLA 4DQYB 1K9M2 2V8IA 4BXXI 3VB9A 3CC71 3PO3S 3CQZI 3BG1B 3KIFA 3MZLB 2P28A 3CMA1 4Y7NI 1QVGY 5T67A 3G6EZ 1QYPA 3HKZA 3ESWA 3CME1 1YI2Z 4A3EI 1VQ4Z 1N8R1 4EWCA 3S1MI 4MONA 1RO4A 4A93I 2OOYB 2OTJZ 2VUMI 3I56Z 1YIT1 2R92I 4A3DI 4MD9A 3I4NI 2KPIA 1L1OC 1RO2A 2JA6I 3CCLZ 2E9HA 2E2II 1ZB9A 3NH8A 2QA4Z 3S1QI 2YADA 2JA7I 3CCQZ 4Y52I 2NVXI 1K83I 4E2XA 3CXCZ 2Q51A 1Z01A 3FQMA 3EEDA 3G4S1 5D1OB 2QR1B 1KQSZ 2W04A 3VTNA 3CCMZ 3IF8A 3CCS1 3GTMS 1USPA 1Y1VI 2LFUA 1KC82 4A3LI 1VQO1 3CCV1 4NH1C 4NBHA 2VUGA 1W2BY 1ZB8A 4E31A 1RO0A 1YIJZ 2P3YA 3HOVI 4BBRI 3RZDI 1WCMI 2PK7A 3D6WA 3HOYI 1VQ7Z 1P9NA 1JJ2Y 2E2JI 1VQP1 3GTJI 1JWHC 5IT9b 1X3ZA 2H85A 2RBLA 4QTUA 2AKLA 2V8KA 3GTLI 3CCE1 2JS4A 1Q822 2JUBA 4NBAA 4NB9A 1VQ9Z 3CMEZ 2RPRA 3EERA 3CCUZ 5A2Qf 1YUKA 1TWCI 3H0GI 4NBFA 1VLAA 2GTHA 3J80f 1M1K1 3S16I 1YHQ1 3CC41 1YUAA 1TWFI 3GTQI 2Y0SA 4HGZA 2K3RA 2JNYA 4MD7A 5D1OA 2NVQI 4BY7I 3MONA 3CCJ1 1Q812 1K8A1 5C4JI 3P5JB 3QWUA 2GTIA 3S1NI 1Y1VS 1VQ61 5T64A 3F3PC 2GU2A 4RVFA 1PFTA 1Q7Y1 1VQKZ 2PMZA 1S72Z 3FQQA 1TWHI 1VQMZ 2BJOA 4RVDA 1K732 2QEX1 1I3QI 1KD12 3M4OI 3S15I 3PO2I 5IP9I 2HF1A 1YJ91 3F3FC 1X0TA 3JAMf 1WW9A 2QRCB 5FLXf 1VQNZ 4RV9A 1YJNZ 3I55Z 3S1RI 3G71Z 2W03A 2OTLZ 1TWAI 2YU9I 3CCRZ 1I50I 3U50C 2DE5A 3OW2Z 1VQL1 4QTTA 4RVHA 1VQ51 2NVYI 3GTPI 1Y1WI 5A2Qb 3J81f 3LUSA 2F4MA 3S14I 3CPWZ 2G2KA 4CL1A 2DE6A 4NOZA 3CXCY 3GTKI 3CD6Z 1KQSY 2QLVB 4HH4A 3S17I 3S2HI 1YJWZ 2I3CA 1DL6A 2DE7A 3CC2Z 3HOWI 3G6E1 3KIHA 4E2YA 1M902 1YI21 2IZ3A 2RT9A 1N8R2 1VQ81 1VQ41 3I4MI 1ZH1A 2QREB 3GCFA 1K9M1 4A3GI 4HGYA 2OTJ1 4E30A 4BBSI 3PO3I 2WB1A 3I561 3CC7Z 2K5RA 4E32A 3CCL1 1QVFZ 4XX2A 4A3FI 1RLYA 3CMAZ 2QA41 3NFZA 3CCQ1 3I07A 1QVFY 2JA8I 4MD8A 2EGTA 4E33A 4NFRA 5FLMI 1ML8A 2M48A 1TFIA 1RNIA 3CCM1 1KD11 3NH5A 2WAQA 3HOUI 5CM2M 1YITZ 4TNUA 4DGLA 5D1PA 2E2HI 2IZ4A 3NH4A 5IP7I 1R9TI 1WIIA 4RS4A 2QRDB 1YIJ1 4NBGA 2HU9A 4E2ZA 2JA5I 2O53A 3G4SZ 3S2DI 1VQ71 4A3II 4E2WA 3VMIA 3J7A4 3BG0B 4DK1A 3CCSZ 2PM9A 3RZOI 1QVGZ 3GTGI 1NJI2 1Z03A 3MZKB 4A3JI 4NBCA 1Q862 1KC81 1X3WA 4A3BI 1VQOZ 4AYBA 4MXUA 1RQFA 3CCVZ 3NDJA 2B63I 1KRLA 1VQ91 2R6MA 3VMGA 1M901 2M6NA 3CCU1 2R7ZI 1VQ8Z 3FKII 3D9XA 3IFUA 2KI7B 5IT9f 3GKQA 3M3YI 1M1K2 3OW2Y 1VQPZ 2VF1A 1K8A2 1NUIA 3J80b 5LL6f 2Q4ZA 2O4HA 4BY1I 5AN9F 2R93I 3CCEZ 3CPWY 3H3VJ 1I6HI 2F4OA 1Q7Y2 2QKDA 1Q821 1VQK1 3GTOI 1S721 1TWGI 1Z02A 1VQM1 2OZKA 4MRIA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3I4N I;  3S1N I;  2KPI A;  5FLM I;  4A3D I;  1ML8 A;  1Y1V S;  1L1O C;  2NVT I;  4MH4 A;  2JA6 I;  1PFT A;  1TFI A;  2E2I I;  1ZB9 A;  1TWH I;  5C44 I;  2BJO A;  2JR6 A;  3S1Q I;  2JA7 I;  3HOU I;  4Y52 I;  5CM2 M;  2NVX I;  1K83 I;  1I3Q I;  3M4O I;  3S15 I;  3PO2 I;  5IP9 I;  2HF1 A;  4NB8 A;  4A3C I;  2E2H I;  5IP7 I;  4A3K I;  1R9T I;  4X6A I;  4NBE A;  3HOX I;  1WW9 A;  4NBG A;  3GTM S;  3HOZ I;  1USP A;  5C4X I;  5C3E I;  1Y1V I;  3S1R I;  2JA5 I;  1TWA I;  2YU9 I;  1I50 I;  4A3L I;  3U50 C;  2DE5 A;  3S2D I;  4A3I I;  4NBH A;  4A3M I;  4NBD A;  3VMH A;  4QTT A;  2NVY I;  1ZB8 A;  3VMI A;  3GTP I;  1Y1W I;  1SFO I;  2P3Y A;  4NBB A;  3RZO I;  3K7A I;  3LUS A;  3GTG I;  3HOV I;  4BBR I;  2J6A A;  2F4M A;  1N2F A;  3S14 I;  3RZD I;  4A3J I;  2DE6 A;  1WCM I;  2PK7 A;  1X3W A;  4NOZ A;  4NBC A;  4A3B I;  3D6W A;  3HOY I;  3GTK I;  3Q87 A;  2B63 I;  3GTM I;  1USP B;  2E2J I;  1LQL A;  3GTJ I;  3S17 I;  3VMG A;  3S2H I;  4BXX I;  3VB9 A;  2R7Z I;  1DL6 A;  1X3Z A;  2RBL A;  2DE7 A;  3FKI I;  4QTU A;  2AKL A;  3HOW I;  3PO3 S;  3CQZ I;  3GKQ A;  3GTL I;  3M3Y I;  2JS4 A;  4NBA A;  3I4M I;  4NB9 A;  3GCF A;  4A3G I;  3EER A;  1NUI A;  4Y7N I;  4BBS I;  4BY1 I;  1TWC I;  3H0G I;  4NBF A;  2R93 I;  1QYP A;  3ESW A;  1VLA A;  3H3V J;  2K5R A;  2F4O A;  1I6H I;  4A3E I;  3S16 I;  4XX2 A;  1YUA A;  4A3F I;  1TWF I;  3GTO I;  1RLY A;  3S1M I;  1RO4 A;  3GTQ I;  1TWG I;  2JNY A;  2NVQ I;  4A93 I;  4BY7 I;  5C4J I;  2VUM I;  3I07 A;  3PO3 I;  2JA8 I;  2R92 I; 
#chains in the Genus database with same CATH topology
 3TDH B;  2NVT I;  4MH4 A;  1YHQ Z;  1W2B Z;  3CC4 Z;  2OOX B;  2JMO A;  5C44 I;  1QF8 A;  2JR6 A;  3CCJ Z;  1VQN 1;  1YJN 1;  3NDI A;  3I55 1;  1Q81 1;  2JIP A;  3G71 1;  2OTL 1;  3CCR 1;  1VQ6 Z;  5FLX b;  3IX0 A;  3JAM b;  1JJ2 Z;  2RHB A;  4NB8 A;  4A3C I;  3TE5 B;  4A3K I;  3T4N B;  2V8J A;  4X6A I;  4NBE A;  3HOX I;  4S1T A;  3HOZ I;  5T6B A;  5C4X I;  5C3E I;  2QEX Z;  2LIY A;  1K73 1;  2ZAE B;  3J81 b;  1YJ9 Z;  3CD6 1;  1NP6 A;  4A3M I;  4RVG A;  4NBD A;  1S7M A;  1SIW A;  3VMH A;  1NJI 1;  1AA6 A;  1Q86 1;  1SFO I;  1YJW 1;  4NBB A;  3K7A I;  2RIQ A;  2J6A A;  1N2F A;  3CC2 1;  1WJ2 A;  3Q87 A;  1VQL Z;  3GTM I;  1VQ5 Z;  1USP B;  1LQL A;  4DQY B;  1K9M 2;  2V8I A;  4BXX I;  3VB9 A;  3CC7 1;  3PO3 S;  3CQZ I;  3BG1 B;  3KIF A;  3MZL B;  2V3V A;  2P28 A;  3CMA 1;  4Y7N I;  1QVG Y;  5T67 A;  3G6E Z;  1QYP A;  3HKZ A;  3ESW A;  3CME 1;  1YI2 Z;  4A3E I;  1VQ4 Z;  1N8R 1;  4EWC A;  3S1M I;  4MON A;  1RO4 A;  4A93 I;  2OOY B;  2OTJ Z;  2VUM I;  3I56 Z;  1YIT 1;  2R92 I;  4A3D I;  4MD9 A;  2E7Z A;  2LEX A;  3I4N I;  2KPI A;  1L1O C;  1RO2 A;  2JA6 I;  3CCL Z;  2E9H A;  2E2I I;  1ZB9 A;  3NH8 A;  2QA4 Z;  3S1Q I;  2YAD A;  2JA7 I;  2JIO A;  3CCQ Z;  4Y52 I;  1FDO A;  2NVX I;  1K83 I;  4E2X A;  3CXC Z;  2Q51 A;  1Z01 A;  3FQM A;  3EED A;  3G4S 1;  5D1O B;  2QR1 B;  1KQS Z;  2W04 A;  3CCM Z;  3VTN A;  3IF8 A;  3CCS 1;  3GTM S;  1USP A;  2VPX A;  1Y1V I;  1FDI A;  2LFU A;  1KC8 2;  4A3L I;  1VQO 1;  3CCV 1;  4NH1 C;  4NBH A;  2VUG A;  1W2B Y;  1ZB8 A;  4E31 A;  2VPZ A;  1RO0 A;  1YIJ Z;  2P3Y A;  3HOV I;  4BBR I;  3RZD I;  1WCM I;  2PK7 A;  3D6W A;  2IV2 X;  3HOY I;  1VQ7 Z;  1P9N A;  1JJ2 Y;  2E2J I;  1VQP 1;  3GTJ I;  1JWH C;  5IT9 b;  1X3Z A;  2H85 A;  2RBL A;  4QTU A;  2AKL A;  2V8K A;  3GTL I;  3CCE 1;  2JS4 A;  1Q82 2;  2JUB A;  4NBA A;  4NB9 A;  1VQ9 Z;  3CME Z;  2RPR A;  3EER A;  3CCU Z;  5A2Q f;  1YUK A;  1TWC I;  3H0G I;  4NBF A;  1VLA A;  2GTH A;  3J80 f;  1M1K 1;  3S16 I;  1YHQ 1;  3CC4 1;  1YUA A;  1TWF I;  3GTQ I;  2Y0S A;  4HGZ A;  2K3R A;  2JNY A;  4MD7 A;  5D1O A;  2NVQ I;  4BY7 I;  3MON A;  3CCJ 1;  1Q81 2;  1K8A 1;  5C4J I;  3P5J B;  3QWU A;  2GTI A;  3S1N I;  1Y1V S;  1VQ6 1;  5T64 A;  3F3P C;  2GU2 A;  4RVF A;  1PFT A;  1Q7Y 1;  1VQK Z;  2PMZ A;  1S72 Z;  3FQQ A;  1TWH I;  1VQM Z;  2BJO A;  4RVD A;  1K73 2;  2QEX 1;  1I3Q I;  1KD1 2;  3M4O I;  3S15 I;  3PO2 I;  5IP9 I;  2HF1 A;  1YJ9 1;  3F3F C;  1X0T A;  3JAM f;  1WW9 A;  2QRC B;  5FLX f;  1VQN Z;  4RV9 A;  1YJN Z;  3I55 Z;  3S1R I;  2VPY A;  3G71 Z;  2W03 A;  2OTL Z;  1TWA I;  2YU9 I;  3CCR Z;  1I50 I;  3U50 C;  2DE5 A;  3OW2 Z;  1VQL 1;  4QTT A;  4RVH A;  1VQ5 1;  2NVY I;  3GTP I;  1Y1W I;  5A2Q b;  3J81 f;  3LUS A;  2F4M A;  3S14 I;  2JIR A;  3CPW Z;  2G2K A;  4CL1 A;  2DE6 A;  2NAP A;  4NOZ A;  3CXC Y;  3GTK I;  3CD6 Z;  1KQS Y;  2QLV B;  4HH4 A;  3S17 I;  3S2H I;  1YJW Z;  2I3C A;  1DL6 A;  2DE7 A;  3CC2 Z;  3HOW I;  3G6E 1;  3KIH A;  4E2Y A;  2V45 A;  1M90 2;  1YI2 1;  1Q16 A;  2IZ3 A;  2RT9 A;  1N8R 2;  1VQ8 1;  1VQ4 1;  3I4M I;  1ZH1 A;  2QRE B;  3GCF A;  1K9M 1;  4A3G I;  4HGY A;  2OTJ 1;  4E30 A;  4BBS I;  3PO3 I;  2WB1 A;  3I56 1;  3CC7 Z;  2K5R A;  4E32 A;  3CCL 1;  1QVF Z;  4XX2 A;  4A3F I;  1RLY A;  3CMA Z;  2QA4 1;  1WZN A;  3NFZ A;  3CCQ 1;  3I07 A;  1QVF Y;  2JA8 I;  4MD8 A;  2EGT A;  4E33 A;  4NFR A;  5FLM I;  1ML8 A;  2M48 A;  1TFI A;  1RNI A;  3CCM 1;  1KD1 1;  3NH5 A;  1Y8C A;  2WAQ A;  3HOU I;  5CM2 M;  1YIT Z;  4TNU A;  4DGL A;  5D1P A;  2E2H I;  2IZ4 A;  3NH4 A;  1QXF A;  5IP7 I;  1R9T I;  2AYD A;  1WII A;  4RS4 A;  2QRD B;  1YIJ 1;  4NBG A;  2HU9 A;  4E2Z A;  2JA5 I;  2O53 A;  3G4S Z;  3S2D I;  1VQ7 1;  4A3I I;  4E2W A;  3VMI A;  3J7A 4;  3BG0 B;  4DK1 A;  3CCS Z;  3IR7 A;  2PM9 A;  3RZO I;  1QVG Z;  3GTG I;  1NJI 2;  1Z03 A;  3MZK B;  4A3J I;  4NBC A;  1Q86 2;  1KC8 1;  1X3W A;  4A3B I;  1VQO Z;  4AYB A;  3D2L A;  4MXU A;  1RQF A;  3CCV Z;  3NDJ A;  2B63 I;  1KRL A;  2JIQ A;  1VQ9 1;  2R6M A;  3VMG A;  1M90 1;  2M6N A;  3CCU 1;  2R7Z I;  1VQ8 Z;  3FKI I;  3D9X A;  3IFU A;  2KI7 B;  5IT9 f;  3GKQ A;  3M3Y I;  1M1K 2;  3OW2 Y;  1VQP Z;  2JIM A;  2VF1 A;  1K8A 2;  1NUI A;  3J80 b;  5LL6 f;  2Q4Z A;  2O4H A;  4BY1 I;  5AN9 F;  2R93 I;  3CCE Z;  3CPW Y;  2VPW A;  3H3V J;  1I6H I;  2F4O A;  1Q7Y 2;  2QKD A;  1Q82 1;  1VQK 1;  3GTO I;  1S72 1;  1TWG I;  1Z02 A;  1VQM 1;  2OZK A;  4MRI A; 
#chains in the Genus database with same CATH homology
 3TDH B;  2NVT I;  4MH4 A;  1YHQ Z;  1W2B Z;  3CC4 Z;  2OOX B;  2JMO A;  5C44 I;  1QF8 A;  2JR6 A;  3CCJ Z;  1VQN 1;  1YJN 1;  3NDI A;  3I55 1;  1Q81 1;  3G71 1;  2OTL 1;  3CCR 1;  1VQ6 Z;  5FLX b;  3IX0 A;  3JAM b;  1JJ2 Z;  2RHB A;  4NB8 A;  4A3C I;  3TE5 B;  4A3K I;  3T4N B;  2V8J A;  4X6A I;  4NBE A;  3HOX I;  4S1T A;  3HOZ I;  5T6B A;  5C4X I;  5C3E I;  2QEX Z;  2LIY A;  1K73 1;  2ZAE B;  3J81 b;  1YJ9 Z;  3CD6 1;  1NP6 A;  4A3M I;  4RVG A;  4NBD A;  1S7M A;  3VMH A;  1NJI 1;  1Q86 1;  1SFO I;  1YJW 1;  4NBB A;  3K7A I;  2RIQ A;  2J6A A;  1N2F A;  3CC2 1;  3Q87 A;  1VQL Z;  3GTM I;  1VQ5 Z;  1USP B;  1LQL A;  4DQY B;  1K9M 2;  2V8I A;  4BXX I;  3VB9 A;  3CC7 1;  3PO3 S;  3CQZ I;  3BG1 B;  3KIF A;  3MZL B;  2P28 A;  3CMA 1;  4Y7N I;  1QVG Y;  5T67 A;  3G6E Z;  1QYP A;  3HKZ A;  3ESW A;  3CME 1;  1YI2 Z;  4A3E I;  1VQ4 Z;  1N8R 1;  4EWC A;  3S1M I;  4MON A;  1RO4 A;  4A93 I;  2OOY B;  2OTJ Z;  2VUM I;  3I56 Z;  1YIT 1;  2R92 I;  4A3D I;  4MD9 A;  3I4N I;  2KPI A;  1L1O C;  1RO2 A;  2JA6 I;  3CCL Z;  2E9H A;  2E2I I;  1ZB9 A;  3NH8 A;  2QA4 Z;  3S1Q I;  2YAD A;  2JA7 I;  3CCQ Z;  4Y52 I;  2NVX I;  1K83 I;  4E2X A;  3CXC Z;  2Q51 A;  1Z01 A;  3FQM A;  3EED A;  3G4S 1;  5D1O B;  2QR1 B;  1KQS Z;  2W04 A;  3VTN A;  3CCM Z;  3IF8 A;  3CCS 1;  3GTM S;  1USP A;  1Y1V I;  2LFU A;  1KC8 2;  4A3L I;  1VQO 1;  3CCV 1;  4NH1 C;  4NBH A;  2VUG A;  1W2B Y;  1ZB8 A;  4E31 A;  1RO0 A;  1YIJ Z;  2P3Y A;  3HOV I;  4BBR I;  3RZD I;  1WCM I;  2PK7 A;  3D6W A;  3HOY I;  1VQ7 Z;  1P9N A;  1JJ2 Y;  2E2J I;  1VQP 1;  3GTJ I;  1JWH C;  5IT9 b;  1X3Z A;  2H85 A;  2RBL A;  4QTU A;  2AKL A;  2V8K A;  3GTL I;  3CCE 1;  2JS4 A;  1Q82 2;  2JUB A;  4NBA A;  4NB9 A;  1VQ9 Z;  3CME Z;  2RPR A;  3EER A;  3CCU Z;  5A2Q f;  1YUK A;  1TWC I;  3H0G I;  4NBF A;  1VLA A;  2GTH A;  3J80 f;  1M1K 1;  3S16 I;  1YHQ 1;  3CC4 1;  1YUA A;  1TWF I;  3GTQ I;  2Y0S A;  4HGZ A;  2K3R A;  2JNY A;  4MD7 A;  5D1O A;  2NVQ I;  4BY7 I;  3MON A;  3CCJ 1;  1Q81 2;  1K8A 1;  5C4J I;  3P5J B;  3QWU A;  2GTI A;  3S1N I;  1Y1V S;  1VQ6 1;  5T64 A;  3F3P C;  2GU2 A;  4RVF A;  1PFT A;  1Q7Y 1;  1VQK Z;  2PMZ A;  1S72 Z;  3FQQ A;  1TWH I;  1VQM Z;  2BJO A;  4RVD A;  1K73 2;  2QEX 1;  1I3Q I;  1KD1 2;  3M4O I;  3S15 I;  3PO2 I;  5IP9 I;  2HF1 A;  1YJ9 1;  3F3F C;  1X0T A;  3JAM f;  1WW9 A;  2QRC B;  5FLX f;  1VQN Z;  4RV9 A;  1YJN Z;  3I55 Z;  3S1R I;  3G71 Z;  2W03 A;  2OTL Z;  1TWA I;  2YU9 I;  3CCR Z;  1I50 I;  3U50 C;  2DE5 A;  3OW2 Z;  1VQL 1;  4QTT A;  4RVH A;  1VQ5 1;  2NVY I;  3GTP I;  1Y1W I;  5A2Q b;  3J81 f;  3LUS A;  2F4M A;  3S14 I;  3CPW Z;  2G2K A;  4CL1 A;  2DE6 A;  4NOZ A;  3CXC Y;  3GTK I;  3CD6 Z;  1KQS Y;  2QLV B;  4HH4 A;  3S17 I;  3S2H I;  1YJW Z;  2I3C A;  1DL6 A;  2DE7 A;  3CC2 Z;  3HOW I;  3G6E 1;  3KIH A;  4E2Y A;  1M90 2;  1YI2 1;  2IZ3 A;  2RT9 A;  1N8R 2;  1VQ8 1;  1VQ4 1;  3I4M I;  1ZH1 A;  2QRE B;  3GCF A;  1K9M 1;  4A3G I;  4HGY A;  2OTJ 1;  4E30 A;  4BBS I;  3PO3 I;  2WB1 A;  3I56 1;  3CC7 Z;  2K5R A;  4E32 A;  3CCL 1;  1QVF Z;  4XX2 A;  4A3F I;  1RLY A;  3CMA Z;  2QA4 1;  3NFZ A;  3CCQ 1;  3I07 A;  1QVF Y;  2JA8 I;  4MD8 A;  2EGT A;  4E33 A;  4NFR A;  5FLM I;  1ML8 A;  2M48 A;  1TFI A;  1RNI A;  3CCM 1;  1KD1 1;  3NH5 A;  2WAQ A;  3HOU I;  5CM2 M;  1YIT Z;  4TNU A;  4DGL A;  5D1P A;  2E2H I;  2IZ4 A;  3NH4 A;  5IP7 I;  1R9T I;  1WII A;  4RS4 A;  2QRD B;  1YIJ 1;  4NBG A;  2HU9 A;  4E2Z A;  2JA5 I;  2O53 A;  3G4S Z;  3S2D I;  1VQ7 1;  4A3I I;  4E2W A;  3VMI A;  3J7A 4;  3BG0 B;  4DK1 A;  3CCS Z;  2PM9 A;  3RZO I;  1QVG Z;  3GTG I;  1NJI 2;  1Z03 A;  3MZK B;  4A3J I;  4NBC A;  1Q86 2;  1KC8 1;  1X3W A;  4A3B I;  1VQO Z;  4AYB A;  4MXU A;  1RQF A;  3CCV Z;  3NDJ A;  2B63 I;  1KRL A;  1VQ9 1;  2R6M A;  3VMG A;  1M90 1;  2M6N A;  3CCU 1;  2R7Z I;  1VQ8 Z;  3FKI I;  3D9X A;  3IFU A;  2KI7 B;  5IT9 f;  3GKQ A;  3M3Y I;  1M1K 2;  3OW2 Y;  1VQP Z;  2VF1 A;  1K8A 2;  1NUI A;  3J80 b;  5LL6 f;  2Q4Z A;  2O4H A;  4BY1 I;  5AN9 F;  2R93 I;  3CCE Z;  3CPW Y;  3H3V J;  1I6H I;  2F4O A;  1Q7Y 2;  2QKD A;  1Q82 1;  1VQK 1;  3GTO I;  1S72 1;  1TWG I;  1Z02 A;  1VQM 1;  2OZK A;  4MRI A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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