3GTMI

Co-complex of backtracked rna polymerase ii with tfiis
Total Genus 8

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV1 (7-10)TII'1 (8-11)S1 (14-19)TI2 (20-23)S2 (24-29)S3 (35-37)TIV3 (30-33)TIV5 (47-50)S5 (83-87)3H1 (62-64)TIV6 (59-62)TI3 (65-68)S4 (70-71)TIV7 (75-78)TIV8 (76-79)S6 (99-103)TIV9 (103-106)O1 (89-91)S7 (109-111)TIV10 (104-107)TIV11 (113-116)TI1 (19-22)TI4 (92-95)Updating...
connected with : NaN
molecule tags Transcription, transferase/dna-rna hybrid
source organism Saccharomyces cerevisiae
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 8
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3gtmI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3gtmI02
3PO2I 1TWAI 2R92I 3GCFA 5C4JI 1TFIA 3LUSA 1ZB8A 4A3DI 1YUAA 3H0GI 3VMIA 4XX2A 3PO3I 1Y1WI 1USPB 4NOZA 4QTTA 2F4OA 3GTMS 4BBSI 1R9TI 1TWGI 1Y1VI 3Q87A 1RLYA 2E2JI 2P3YA 5IP7I 1VLAA 2J6AA 1PFTA 3RZOI 3HOUI 1SFOI 4NBBA 2JS4A 4A3EI 2E2II 4Y7NI 2BJOA 1I50I 5FLMI 2NVQI 2JA6I 1L1OC 3CQZI 2JA7I 2JA8I 4A3LI 4NBFA 1I3QI 1X3ZA 4NBCA 3ESWA 5C4XI 2YU9I 3S14I 3FKII 3S1RI 1TWCI 5C44I 1ML8A 3HOYI 3GTPI 4BBRI 4A3GI 2F4MA 3I4MI 3GTQI 4A93I 4MH4A 2NVXI 3S1NI 2R93I 1NUIA 5C3EI 1I6HI 3VMHA 3EERA 2PK7A 2DE6A 2HF1A 3PO3S 4NBEA 3GTMI 1ZB9A 4QTUA 4NB9A 3GKQA 4Y52I 5CM2M 1DL6A 1TWHI 1Y1VS 3RZDI 1N2FA 2NVYI 3D6WA 4A3MI 2B63I 1RO4A 3S1MI 1QYPA 3VB9A 3GTOI 4NBHA 3M4OI 3HOWI 2R7ZI 4BXXI 4A3II 4NBGA 3U50C 3S15I 1TWFI 3S1QI 2JA5I 4BY1I 1WW9A 4BY7I 4A3KI 1USPA 3VMGA 3HOVI 2JR6A 3S17I 2AKLA 3GTJI 4NB8A 3GTLI 3I07A 3HOZI 3M3YI 3HOXI 1LQLA 2RBLA 2DE7A 3H3VJ 3K7AI 3GTGI 3S16I 1WCMI 4A3JI 3GTKI 3S2DI 4X6AI 2E2HI 2KPIA 4A3FI 2NVTI 2DE5A 2VUMI 4NBDA 2JNYA 5IP9I 3I4NI 1K83I 4A3BI 1X3WA 4A3CI 2K5RA 3S2HI 4NBAA
chains in the Genus database with same CATH superfamily
1Q16A 3CC2Z 1TWAI 3PO2I 2OOXB 1YJWZ 1SIWA 1S7MA 3BG0B 3LUSA 4A3DI 3F3FC 5AN9F 3PO3I 1Y1WI 3D2LA 1VQO1 4BBSI 1RQFA 1R9TI 2JIMA 1K9M1 4RVDA 1RNIA 2OTJ1 5IP7I 1Q822 1VLAA 2J6AA 1WIIA 1SFOI 4RVHA 5FLMI 2NVQI 1L1OC 3CQZI 4E2WA 2JA8I 1YIJ1 2JIOA 2E7ZA 2P28A 3CPWZ 2YU9I 1YITZ 3S1RI 3CCMZ 3OW2Y 2JIRA 1ML8A 4RVFA 4BBRI 1Q7Y2 1RO0A 2QR1B 1I6HI 4DQYB 5A2Qf 4E32A 1VQOZ 4QTUA 4NB9A 4Y52I 2EGTA 2VPWA 5CM2M 3RZDI 1VQ61 3D6WA 2OTJZ 1Z01A 1NJI1 3S1MI 3NH5A 1QYPA 3VB9A 4E2ZA 2R7ZI 3S15I 2IV2X 1TWFI 1VQN1 2JA5I 1YIJZ 4BY7I 2WB1A 4A3KI 1S721 3VMGA 4DGLA 2AKLA 3GTJI 3G4S1 3HOXI 1X0TA 2DE7A 3K7AI 5D1OB 2O4HA 3CCU1 3GTKI 3S2DI 1M1K2 3TDHB 1VQ6Z 2VUMI 1YHQ1 5LL6f 3JAMb 3J81b 3CCR1 2Q4ZA 2JMOA 2GTHA 2K5RA 3S2HI 1NJI2 3MONA 1KC82 4NBAA 2R92I 1VQNZ 2YADA 1RO2A 1YUAA 1S72Z 1WJ2A 3I551 4XX2A 4NOZA 1YI21 4HH4A 3G4SZ 1RLYA 2VF1A 3HKZA 3J80f 1K8A2 1PFTA 5FLXf 1Z02A 3RZOI 3OW2Z 2Q51A 1Q7Y1 4A3EI 1N8R2 1VQL1 4TNUA 2JA7I 4A3LI 2OOYB 5T64A 4NBFA 1I3QI 1YHQZ 3T4NB 4DK1A 2RHBA 3CCRZ 3S14I 3FKII 2R6MA 3CCS1 3HOYI 3GTPI 1W2BY 2V45A 3I4MI 1QXFA 2E9HA 3GTQI 4A93I 2NVXI 4NH1C 2R93I 1NUIA 3P5JB 5C3EI 3KIHA 1AA6A 2DE6A 1VQ51 2HF1A 3I55Z 1QVGY 3PO3S 1ZB9A 1YI2Z 3QWUA 3KIFA 1JJ2Y 2VUGA 1TWHI 1N2FA 2W04A 4A3MI 2HU9A 1RO4A 2ZAEB 3CD61 2WAQA 3D9XA 3M4OI 1VQLZ 1VQ91 3U50C 1WW9A 5A2Qb 1YJ91 1VQK1 1M1K1 4MRIA 3NH4A 4NB8A 3CCSZ 3CCQ1 3HOZI 2RBLA 2V8IA 1QVFY 3GTGI 3S16I 2RIQA 3CC71 1KC81 2VPYA 1VQ5Z 4A3JI 3CXCY 3IF8A 4RVGA 1VQMZ 4X6AI 4RV9A 1Q812 2AYDA 2KPIA 4EWCA 4A3FI 2JIPA 2JNYA 3NDIA 3CD6Z 4A3BI 1VQ41 1Z03A 4A3CI 3CME1 2RT9A 1M901 1VQ9Z 5C4XI 1VQP1 3CC41 3NDJA 3GCFA 4NFRA 5C4JI 1K8A1 1YJ9Z 1VQKZ 1N8R1 1USPB 2LFUA 4QTTA 2F4OA 3GTMS 2QREB 3EEDA 3CCQZ 1TWGI 1Y1VI 2P3YA 3FQMA 3CPWY 3CC7Z 4AYBA 2JS4A 2E2II 4MD9A 2VPXA 2BJOA 1I50I 2K3RA 4Y7NI 5IT9f 5D1PA 2VPZA 2PM9A 1VQ71 2JUBA 1K731 1KRLA 1VQ4Z 3CMEZ 2QLVB 1TWCI 1VQPZ 1JJ2Z 3CC4Z 2F4MA 5D1OA 1M902 4MH4A 2OTL1 3S1NI 1FDOA 3J7A4 3VMHA 2PK7A 2V8JA 1VQ81 3GKQA 3IR7A 1DL6A 2JIQA 3CCJZ 2OZKA 2O53A 3CCE1 1FDIA 4NBHA 3GTOI 3HOWI 1KD12 4BXXI 2GTIA 1Q862 1YUKA 1VQ7Z 3CXCZ 1KQSY 3HOVI 1Q811 2JR6A 3S17I 4E30A 2M48A 3FQQA 1K732 3I561 1VQM1 3GTLI 2RPRA 3M3YI 4MD8A 1LQLA 3H3VJ 2OTLZ 3IX0A 4MXUA 2M6NA 1VQ8Z 4MD7A 3BG1B 2W03A 2DE5A 3MZKB 1K83I 1X3WA 3CCEZ 2GU2A 1TFIA 3G6E1 4RS4A 3F3PC 1ZB8A 2QEX1 3H0GI 3VMIA 1WZNA 2QRDB 2IZ3A 3G711 3I56Z 3Q87A 2E2JI 2QRCB 3IFUA 3NH8A 3HOUI 4NBBA 4S1TA 2JA6I 5T6BA 1X3ZA 4NBCA 2Y0SA 1JWHC 3ESWA 3CCV1 3VTNA 1K9M2 1QF8A 2NAPA 4CL1A 2G2KA 5C44I 1Y8CA 4A3GI 1YJN1 3G6EZ 1ZH1A 3CCJ1 3CMA1 2QEXZ 3EERA 1KD11 5IT9b 4NBEA 3GTMI 4E33A 3G71Z 1Q861 1W2BZ 4MONA 2QA41 1Y1VS 3CCL1 2NVYI 2B63I 2V8KA 1KQSZ 1QVGZ 1P9NA 4A3II 4NBGA 3CC21 2LIYA 3S1QI 4BY1I 1YJW1 3NFZA 3J80b 3MZLB 5FLXb 3CCVZ 1USPA 2KI7B 3JAMf 3J81f 2IZ4A 1Q821 1YJNZ 3I07A 2I3CA 3CMAZ 5T67A 2V3VA 4HGYA 1WCMI 4E31A 1NP6A 4E2XA 2LEXA 3TE5B 2PMZA 2E2HI 4E2YA 2QA4Z 4HGZA 3CCLZ 2NVTI 4NBDA 1QVFZ 2H85A 5IP9I 3I4NI 1YIT1 3CCUZ 2QKDA 3CCM1
chains in the Genus database with same CATH topology
3CC2Z 1TWAI 3PO2I 2OOXB 1YJWZ 1S7MA 3BG0B 3LUSA 4A3DI 3F3FC 5AN9F 3PO3I 1Y1WI 1VQO1 4BBSI 1RQFA 1R9TI 1K9M1 4RVDA 1RNIA 2OTJ1 5IP7I 1Q822 1VLAA 2J6AA 1WIIA 1SFOI 4RVHA 5FLMI 2NVQI 1L1OC 3CQZI 4E2WA 2JA8I 1YIJ1 2P28A 3CPWZ 2YU9I 1YITZ 3S1RI 3CCMZ 3OW2Y 1ML8A 4RVFA 4BBRI 1Q7Y2 1RO0A 2QR1B 1I6HI 4DQYB 5A2Qf 4E32A 1VQOZ 4QTUA 4NB9A 4Y52I 2EGTA 5CM2M 3RZDI 1VQ61 3D6WA 2OTJZ 1Z01A 1NJI1 3S1MI 3NH5A 1QYPA 3VB9A 4E2ZA 2R7ZI 3S15I 1TWFI 1VQN1 2JA5I 1YIJZ 4BY7I 2WB1A 4A3KI 1S721 3VMGA 4DGLA 2AKLA 3GTJI 3G4S1 3HOXI 1X0TA 2DE7A 3K7AI 5D1OB 2O4HA 3CCU1 3GTKI 3S2DI 1M1K2 3TDHB 1VQ6Z 2VUMI 1YHQ1 5LL6f 3JAMb 3J81b 3CCR1 2Q4ZA 2JMOA 2GTHA 2K5RA 3S2HI 1NJI2 3MONA 1KC82 4NBAA 2R92I 1VQNZ 2YADA 1RO2A 1YUAA 1S72Z 3I551 4XX2A 4NOZA 1YI21 4HH4A 3G4SZ 1RLYA 2VF1A 3HKZA 3J80f 1K8A2 1PFTA 5FLXf 1Z02A 3RZOI 3OW2Z 2Q51A 1Q7Y1 4A3EI 1N8R2 1VQL1 4TNUA 2JA7I 4A3LI 2OOYB 5T64A 4NBFA 1I3QI 1YHQZ 3T4NB 4DK1A 2RHBA 3CCRZ 3S14I 3FKII 2R6MA 3CCS1 3HOYI 3GTPI 1W2BY 3I4MI 2E9HA 3GTQI 4A93I 2NVXI 4NH1C 2R93I 1NUIA 3P5JB 5C3EI 3KIHA 2DE6A 1VQ51 2HF1A 3I55Z 1QVGY 3PO3S 1ZB9A 1YI2Z 3QWUA 3KIFA 1JJ2Y 2VUGA 1TWHI 1N2FA 2W04A 4A3MI 2HU9A 1RO4A 2ZAEB 3CD61 2WAQA 3D9XA 3M4OI 1VQLZ 1VQ91 3U50C 1WW9A 5A2Qb 1YJ91 1VQK1 1M1K1 4MRIA 3NH4A 4NB8A 3CCSZ 3CCQ1 3HOZI 2RBLA 2V8IA 1QVFY 3GTGI 3S16I 2RIQA 3CC71 1KC81 1VQ5Z 4A3JI 3CXCY 3IF8A 4RVGA 1VQMZ 4X6AI 4RV9A 1Q812 2KPIA 4A3FI 4EWCA 2JNYA 3NDIA 3CD6Z 4A3BI 1VQ41 1Z03A 4A3CI 3CME1 2RT9A 1M901 1VQ9Z 5C4XI 1VQP1 3CC41 3NDJA 3GCFA 4NFRA 5C4JI 1K8A1 1YJ9Z 1VQKZ 1N8R1 1USPB 2LFUA 4QTTA 2F4OA 3GTMS 2QREB 3EEDA 3CCQZ 1TWGI 1Y1VI 2P3YA 3FQMA 3CPWY 3CC7Z 4AYBA 2JS4A 2E2II 4MD9A 4Y7NI 2BJOA 1I50I 2K3RA 5IT9f 5D1PA 2PM9A 1VQ71 2JUBA 1K731 1KRLA 1VQ4Z 3CMEZ 2QLVB 1TWCI 1VQPZ 1JJ2Z 3CC4Z 2F4MA 5D1OA 1M902 4MH4A 2OTL1 3S1NI 3J7A4 3VMHA 2PK7A 2V8JA 1VQ81 3GKQA 1DL6A 3CCJZ 2OZKA 2O53A 3CCE1 3GTOI 4NBHA 3HOWI 1KD12 4BXXI 2GTIA 1Q862 1YUKA 1VQ7Z 3CXCZ 1KQSY 3HOVI 1Q811 2JR6A 3S17I 4E30A 2M48A 3FQQA 1K732 3I561 1VQM1 3GTLI 2RPRA 3M3YI 4MD8A 1LQLA 3H3VJ 2OTLZ 3IX0A 4MXUA 2M6NA 1VQ8Z 4MD7A 3BG1B 2W03A 2DE5A 3MZKB 1K83I 1X3WA 3CCEZ 2GU2A 1TFIA 3G6E1 4RS4A 3F3PC 1ZB8A 2QEX1 3H0GI 3VMIA 2QRDB 2IZ3A 3G711 3I56Z 3Q87A 2E2JI 2QRCB 3IFUA 3NH8A 3HOUI 4NBBA 4S1TA 2JA6I 5T6BA 1X3ZA 4NBCA 2Y0SA 1JWHC 3ESWA 3VTNA 3CCV1 1K9M2 1QF8A 4CL1A 2G2KA 5C44I 4A3GI 1YJN1 3G6EZ 1ZH1A 3CCJ1 3CMA1 2QEXZ 3EERA 1KD11 5IT9b 4NBEA 3GTMI 4E33A 3G71Z 1Q861 1W2BZ 4MONA 2QA41 1Y1VS 3CCL1 2NVYI 2B63I 2V8KA 1KQSZ 1QVGZ 1P9NA 4A3II 4NBGA 3CC21 2LIYA 3S1QI 4BY1I 1YJW1 3NFZA 3J80b 3MZLB 5FLXb 3CCVZ 1USPA 2KI7B 3JAMf 3J81f 2IZ4A 1Q821 1YJNZ 3I07A 2I3CA 3CMAZ 5T67A 4E31A 4HGYA 1WCMI 1NP6A 4E2XA 3TE5B 2PMZA 2E2HI 4E2YA 2QA4Z 4HGZA 3CCLZ 2NVTI 4NBDA 1QVFZ 2H85A 5IP9I 3I4NI 1YIT1 3CCUZ 2QKDA 3CCM1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PO2 I;  1TWA I;  2R92 I;  3GCF A;  5C4J I;  1TFI A;  3LUS A;  1ZB8 A;  4A3D I;  1YUA A;  3H0G I;  3VMI A;  4XX2 A;  3PO3 I;  1Y1W I;  1USP B;  4NOZ A;  4QTT A;  2F4O A;  3GTM S;  4BBS I;  1R9T I;  1TWG I;  1Y1V I;  3Q87 A;  1RLY A;  2E2J I;  2P3Y A;  5IP7 I;  1VLA A;  2J6A A;  1PFT A;  3RZO I;  3HOU I;  1SFO I;  4NBB A;  2JS4 A;  4A3E I;  2E2I I;  4Y7N I;  2BJO A;  1I50 I;  5FLM I;  2NVQ I;  2JA6 I;  1L1O C;  3CQZ I;  2JA7 I;  2JA8 I;  4A3L I;  4NBF A;  1I3Q I;  1X3Z A;  4NBC A;  3ESW A;  5C4X I;  2YU9 I;  3S14 I;  3FKI I;  3S1R I;  1TWC I;  5C44 I;  1ML8 A;  3HOY I;  3GTP I;  4BBR I;  4A3G I;  2F4M A;  3I4M I;  3GTQ I;  4A93 I;  4MH4 A;  2NVX I;  3S1N I;  2R93 I;  1NUI A;  5C3E I;  1I6H I;  3VMH A;  3EER A;  2PK7 A;  2DE6 A;  2HF1 A;  3PO3 S;  4NBE A;  3GTM I;  1ZB9 A;  4QTU A;  4NB9 A;  3GKQ A;  4Y52 I;  5CM2 M;  1DL6 A;  1TWH I;  1Y1V S;  3RZD I;  1N2F A;  2NVY I;  3D6W A;  4A3M I;  2B63 I;  1RO4 A;  3S1M I;  1QYP A;  3VB9 A;  3GTO I;  4NBH A;  3M4O I;  3HOW I;  2R7Z I;  4BXX I;  4A3I I;  4NBG A;  3U50 C;  3S15 I;  1TWF I;  3S1Q I;  2JA5 I;  4BY1 I;  1WW9 A;  4BY7 I;  4A3K I;  1USP A;  3VMG A;  3HOV I;  2JR6 A;  3S17 I;  2AKL A;  3GTJ I;  4NB8 A;  3GTL I;  3I07 A;  3HOZ I;  3M3Y I;  3HOX I;  1LQL A;  2RBL A;  2DE7 A;  3H3V J;  3K7A I;  3GTG I;  3S16 I;  1WCM I;  4A3J I;  3GTK I;  3S2D I;  4X6A I;  2E2H I;  2KPI A;  4A3F I;  2NVT I;  2DE5 A;  2VUM I;  4NBD A;  2JNY A;  5IP9 I;  3I4N I;  1K83 I;  4A3B I;  1X3W A;  4A3C I;  2K5R A;  3S2H I;  4NBA A; 
#chains in the Genus database with same CATH topology
 1Q16 A;  3CC2 Z;  1TWA I;  3PO2 I;  2OOX B;  1YJW Z;  1SIW A;  1S7M A;  3BG0 B;  3LUS A;  4A3D I;  3F3F C;  5AN9 F;  3PO3 I;  1Y1W I;  3D2L A;  1VQO 1;  4BBS I;  1RQF A;  1R9T I;  2JIM A;  1K9M 1;  4RVD A;  1RNI A;  2OTJ 1;  5IP7 I;  1Q82 2;  1VLA A;  2J6A A;  1WII A;  1SFO I;  4RVH A;  5FLM I;  2NVQ I;  1L1O C;  3CQZ I;  4E2W A;  2JA8 I;  1YIJ 1;  2JIO A;  2E7Z A;  2P28 A;  3CPW Z;  2YU9 I;  1YIT Z;  3S1R I;  3CCM Z;  3OW2 Y;  2JIR A;  1ML8 A;  4RVF A;  4BBR I;  1Q7Y 2;  1RO0 A;  2QR1 B;  1I6H I;  4DQY B;  5A2Q f;  4E32 A;  1VQO Z;  4QTU A;  4NB9 A;  4Y52 I;  2EGT A;  2VPW A;  5CM2 M;  3RZD I;  1VQ6 1;  3D6W A;  2OTJ Z;  1Z01 A;  1NJI 1;  3S1M I;  3NH5 A;  1QYP A;  3VB9 A;  4E2Z A;  2R7Z I;  3S15 I;  2IV2 X;  1TWF I;  1VQN 1;  2JA5 I;  1YIJ Z;  4BY7 I;  2WB1 A;  4A3K I;  1S72 1;  3VMG A;  4DGL A;  2AKL A;  3GTJ I;  3G4S 1;  3HOX I;  1X0T A;  2DE7 A;  3K7A I;  5D1O B;  2O4H A;  3CCU 1;  3GTK I;  3S2D I;  1M1K 2;  3TDH B;  1VQ6 Z;  2VUM I;  1YHQ 1;  5LL6 f;  3JAM b;  3J81 b;  3CCR 1;  2Q4Z A;  2JMO A;  2GTH A;  2K5R A;  3S2H I;  1NJI 2;  3MON A;  1KC8 2;  4NBA A;  2R92 I;  1VQN Z;  2YAD A;  1RO2 A;  1YUA A;  1S72 Z;  1WJ2 A;  3I55 1;  4XX2 A;  4NOZ A;  1YI2 1;  4HH4 A;  3G4S Z;  1RLY A;  2VF1 A;  3HKZ A;  3J80 f;  1K8A 2;  1PFT A;  5FLX f;  1Z02 A;  3RZO I;  3OW2 Z;  2Q51 A;  1Q7Y 1;  4A3E I;  1N8R 2;  1VQL 1;  4TNU A;  2JA7 I;  4A3L I;  2OOY B;  5T64 A;  4NBF A;  1I3Q I;  1YHQ Z;  3T4N B;  4DK1 A;  2RHB A;  3CCR Z;  3S14 I;  3FKI I;  2R6M A;  3CCS 1;  3HOY I;  3GTP I;  1W2B Y;  2V45 A;  3I4M I;  1QXF A;  2E9H A;  3GTQ I;  4A93 I;  2NVX I;  4NH1 C;  2R93 I;  1NUI A;  3P5J B;  5C3E I;  3KIH A;  1AA6 A;  2DE6 A;  1VQ5 1;  2HF1 A;  3I55 Z;  1QVG Y;  3PO3 S;  1ZB9 A;  1YI2 Z;  3QWU A;  3KIF A;  1JJ2 Y;  2VUG A;  1TWH I;  1N2F A;  2W04 A;  4A3M I;  2HU9 A;  1RO4 A;  2ZAE B;  3CD6 1;  2WAQ A;  3D9X A;  3M4O I;  1VQL Z;  1VQ9 1;  3U50 C;  1WW9 A;  5A2Q b;  1YJ9 1;  1VQK 1;  1M1K 1;  4MRI A;  3NH4 A;  4NB8 A;  3CCS Z;  3CCQ 1;  3HOZ I;  2RBL A;  2V8I A;  1QVF Y;  3GTG I;  3S16 I;  2RIQ A;  3CC7 1;  1KC8 1;  2VPY A;  1VQ5 Z;  4A3J I;  3CXC Y;  3IF8 A;  4RVG A;  1VQM Z;  4X6A I;  4RV9 A;  1Q81 2;  2AYD A;  2KPI A;  4EWC A;  4A3F I;  2JIP A;  2JNY A;  3NDI A;  3CD6 Z;  4A3B I;  1VQ4 1;  1Z03 A;  4A3C I;  3CME 1;  2RT9 A;  1M90 1;  1VQ9 Z;  5C4X I;  1VQP 1;  3CC4 1;  3NDJ A;  3GCF A;  4NFR A;  5C4J I;  1K8A 1;  1YJ9 Z;  1VQK Z;  1N8R 1;  1USP B;  2LFU A;  4QTT A;  2F4O A;  3GTM S;  2QRE B;  3EED A;  3CCQ Z;  1TWG I;  1Y1V I;  2P3Y A;  3FQM A;  3CPW Y;  3CC7 Z;  4AYB A;  2JS4 A;  2E2I I;  4MD9 A;  2VPX A;  2BJO A;  1I50 I;  2K3R A;  4Y7N I;  5IT9 f;  5D1P A;  2VPZ A;  2PM9 A;  1VQ7 1;  2JUB A;  1K73 1;  1KRL A;  1VQ4 Z;  3CME Z;  2QLV B;  1TWC I;  1VQP Z;  1JJ2 Z;  3CC4 Z;  2F4M A;  5D1O A;  1M90 2;  4MH4 A;  2OTL 1;  3S1N I;  1FDO A;  3J7A 4;  3VMH A;  2PK7 A;  2V8J A;  1VQ8 1;  3GKQ A;  3IR7 A;  1DL6 A;  2JIQ A;  3CCJ Z;  2OZK A;  2O53 A;  3CCE 1;  1FDI A;  4NBH A;  3GTO I;  3HOW I;  1KD1 2;  4BXX I;  2GTI A;  1Q86 2;  1YUK A;  1VQ7 Z;  3CXC Z;  1KQS Y;  3HOV I;  1Q81 1;  2JR6 A;  3S17 I;  4E30 A;  2M48 A;  3FQQ A;  1K73 2;  3I56 1;  1VQM 1;  3GTL I;  2RPR A;  3M3Y I;  4MD8 A;  1LQL A;  3H3V J;  2OTL Z;  3IX0 A;  4MXU A;  2M6N A;  1VQ8 Z;  4MD7 A;  3BG1 B;  2W03 A;  2DE5 A;  3MZK B;  1K83 I;  1X3W A;  3CCE Z;  2GU2 A;  1TFI A;  3G6E 1;  4RS4 A;  3F3P C;  1ZB8 A;  2QEX 1;  3H0G I;  3VMI A;  1WZN A;  2QRD B;  2IZ3 A;  3G71 1;  3I56 Z;  3Q87 A;  2E2J I;  2QRC B;  3IFU A;  3NH8 A;  3HOU I;  4NBB A;  4S1T A;  2JA6 I;  5T6B A;  1X3Z A;  4NBC A;  2Y0S A;  1JWH C;  3ESW A;  3CCV 1;  3VTN A;  1K9M 2;  1QF8 A;  2NAP A;  4CL1 A;  2G2K A;  5C44 I;  1Y8C A;  4A3G I;  1YJN 1;  3G6E Z;  1ZH1 A;  3CCJ 1;  3CMA 1;  2QEX Z;  3EER A;  1KD1 1;  5IT9 b;  4NBE A;  3GTM I;  4E33 A;  3G71 Z;  1Q86 1;  1W2B Z;  4MON A;  2QA4 1;  1Y1V S;  3CCL 1;  2NVY I;  2B63 I;  2V8K A;  1KQS Z;  1QVG Z;  1P9N A;  4A3I I;  4NBG A;  3CC2 1;  2LIY A;  3S1Q I;  4BY1 I;  1YJW 1;  3NFZ A;  3J80 b;  3MZL B;  5FLX b;  3CCV Z;  1USP A;  2KI7 B;  3JAM f;  3J81 f;  2IZ4 A;  1Q82 1;  1YJN Z;  3I07 A;  2I3C A;  3CMA Z;  5T67 A;  2V3V A;  4HGY A;  1WCM I;  4E31 A;  1NP6 A;  4E2X A;  2LEX A;  3TE5 B;  2PMZ A;  2E2H I;  4E2Y A;  2QA4 Z;  4HGZ A;  3CCL Z;  2NVT I;  4NBD A;  1QVF Z;  2H85 A;  5IP9 I;  3I4N I;  1YIT 1;  3CCU Z;  2QKD A;  3CCM 1; 
#chains in the Genus database with same CATH homology
 3CC2 Z;  1TWA I;  3PO2 I;  2OOX B;  1YJW Z;  1S7M A;  3BG0 B;  3LUS A;  4A3D I;  3F3F C;  5AN9 F;  3PO3 I;  1Y1W I;  1VQO 1;  4BBS I;  1RQF A;  1R9T I;  1K9M 1;  4RVD A;  1RNI A;  2OTJ 1;  5IP7 I;  1Q82 2;  1VLA A;  2J6A A;  1WII A;  1SFO I;  4RVH A;  5FLM I;  2NVQ I;  1L1O C;  3CQZ I;  4E2W A;  2JA8 I;  1YIJ 1;  2P28 A;  3CPW Z;  2YU9 I;  1YIT Z;  3S1R I;  3CCM Z;  3OW2 Y;  1ML8 A;  4RVF A;  4BBR I;  1Q7Y 2;  1RO0 A;  2QR1 B;  1I6H I;  4DQY B;  5A2Q f;  4E32 A;  1VQO Z;  4QTU A;  4NB9 A;  4Y52 I;  2EGT A;  5CM2 M;  3RZD I;  1VQ6 1;  3D6W A;  2OTJ Z;  1Z01 A;  1NJI 1;  3S1M I;  3NH5 A;  1QYP A;  3VB9 A;  4E2Z A;  2R7Z I;  3S15 I;  1TWF I;  1VQN 1;  2JA5 I;  1YIJ Z;  4BY7 I;  2WB1 A;  4A3K I;  1S72 1;  3VMG A;  4DGL A;  2AKL A;  3GTJ I;  3G4S 1;  3HOX I;  1X0T A;  2DE7 A;  3K7A I;  5D1O B;  2O4H A;  3CCU 1;  3GTK I;  3S2D I;  1M1K 2;  3TDH B;  1VQ6 Z;  2VUM I;  1YHQ 1;  5LL6 f;  3JAM b;  3J81 b;  3CCR 1;  2Q4Z A;  2JMO A;  2GTH A;  2K5R A;  3S2H I;  1NJI 2;  3MON A;  1KC8 2;  4NBA A;  2R92 I;  1VQN Z;  2YAD A;  1RO2 A;  1YUA A;  1S72 Z;  3I55 1;  4XX2 A;  4NOZ A;  1YI2 1;  4HH4 A;  3G4S Z;  1RLY A;  2VF1 A;  3HKZ A;  3J80 f;  1K8A 2;  1PFT A;  5FLX f;  1Z02 A;  3RZO I;  3OW2 Z;  2Q51 A;  1Q7Y 1;  4A3E I;  1N8R 2;  1VQL 1;  4TNU A;  2JA7 I;  4A3L I;  2OOY B;  5T64 A;  4NBF A;  1I3Q I;  1YHQ Z;  3T4N B;  4DK1 A;  2RHB A;  3CCR Z;  3S14 I;  3FKI I;  2R6M A;  3CCS 1;  3HOY I;  3GTP I;  1W2B Y;  3I4M I;  2E9H A;  3GTQ I;  4A93 I;  2NVX I;  4NH1 C;  2R93 I;  1NUI A;  3P5J B;  5C3E I;  3KIH A;  2DE6 A;  1VQ5 1;  2HF1 A;  3I55 Z;  1QVG Y;  3PO3 S;  1ZB9 A;  1YI2 Z;  3QWU A;  3KIF A;  1JJ2 Y;  2VUG A;  1TWH I;  1N2F A;  2W04 A;  4A3M I;  2HU9 A;  1RO4 A;  2ZAE B;  3CD6 1;  2WAQ A;  3D9X A;  3M4O I;  1VQL Z;  1VQ9 1;  3U50 C;  1WW9 A;  5A2Q b;  1YJ9 1;  1VQK 1;  1M1K 1;  4MRI A;  3NH4 A;  4NB8 A;  3CCS Z;  3CCQ 1;  3HOZ I;  2RBL A;  2V8I A;  1QVF Y;  3GTG I;  3S16 I;  2RIQ A;  3CC7 1;  1KC8 1;  1VQ5 Z;  4A3J I;  3CXC Y;  3IF8 A;  4RVG A;  1VQM Z;  4X6A I;  4RV9 A;  1Q81 2;  2KPI A;  4A3F I;  4EWC A;  2JNY A;  3NDI A;  3CD6 Z;  4A3B I;  1VQ4 1;  1Z03 A;  4A3C I;  3CME 1;  2RT9 A;  1M90 1;  1VQ9 Z;  5C4X I;  1VQP 1;  3CC4 1;  3NDJ A;  3GCF A;  4NFR A;  5C4J I;  1K8A 1;  1YJ9 Z;  1VQK Z;  1N8R 1;  1USP B;  2LFU A;  4QTT A;  2F4O A;  3GTM S;  2QRE B;  3EED A;  3CCQ Z;  1TWG I;  1Y1V I;  2P3Y A;  3FQM A;  3CPW Y;  3CC7 Z;  4AYB A;  2JS4 A;  2E2I I;  4MD9 A;  4Y7N I;  2BJO A;  1I50 I;  2K3R A;  5IT9 f;  5D1P A;  2PM9 A;  1VQ7 1;  2JUB A;  1K73 1;  1KRL A;  1VQ4 Z;  3CME Z;  2QLV B;  1TWC I;  1VQP Z;  1JJ2 Z;  3CC4 Z;  2F4M A;  5D1O A;  1M90 2;  4MH4 A;  2OTL 1;  3S1N I;  3J7A 4;  3VMH A;  2PK7 A;  2V8J A;  1VQ8 1;  3GKQ A;  1DL6 A;  3CCJ Z;  2OZK A;  2O53 A;  3CCE 1;  3GTO I;  4NBH A;  3HOW I;  1KD1 2;  4BXX I;  2GTI A;  1Q86 2;  1YUK A;  1VQ7 Z;  3CXC Z;  1KQS Y;  3HOV I;  1Q81 1;  2JR6 A;  3S17 I;  4E30 A;  2M48 A;  3FQQ A;  1K73 2;  3I56 1;  1VQM 1;  3GTL I;  2RPR A;  3M3Y I;  4MD8 A;  1LQL A;  3H3V J;  2OTL Z;  3IX0 A;  4MXU A;  2M6N A;  1VQ8 Z;  4MD7 A;  3BG1 B;  2W03 A;  2DE5 A;  3MZK B;  1K83 I;  1X3W A;  3CCE Z;  2GU2 A;  1TFI A;  3G6E 1;  4RS4 A;  3F3P C;  1ZB8 A;  2QEX 1;  3H0G I;  3VMI A;  2QRD B;  2IZ3 A;  3G71 1;  3I56 Z;  3Q87 A;  2E2J I;  2QRC B;  3IFU A;  3NH8 A;  3HOU I;  4NBB A;  4S1T A;  2JA6 I;  5T6B A;  1X3Z A;  4NBC A;  2Y0S A;  1JWH C;  3ESW A;  3VTN A;  3CCV 1;  1K9M 2;  1QF8 A;  4CL1 A;  2G2K A;  5C44 I;  4A3G I;  1YJN 1;  3G6E Z;  1ZH1 A;  3CCJ 1;  3CMA 1;  2QEX Z;  3EER A;  1KD1 1;  5IT9 b;  4NBE A;  3GTM I;  4E33 A;  3G71 Z;  1Q86 1;  1W2B Z;  4MON A;  2QA4 1;  1Y1V S;  3CCL 1;  2NVY I;  2B63 I;  2V8K A;  1KQS Z;  1QVG Z;  1P9N A;  4A3I I;  4NBG A;  3CC2 1;  2LIY A;  3S1Q I;  4BY1 I;  1YJW 1;  3NFZ A;  3J80 b;  3MZL B;  5FLX b;  3CCV Z;  1USP A;  2KI7 B;  3JAM f;  3J81 f;  2IZ4 A;  1Q82 1;  1YJN Z;  3I07 A;  2I3C A;  3CMA Z;  5T67 A;  4E31 A;  4HGY A;  1WCM I;  1NP6 A;  4E2X A;  3TE5 B;  2PMZ A;  2E2H I;  4E2Y A;  2QA4 Z;  4HGZ A;  3CCL Z;  2NVT I;  4NBD A;  1QVF Z;  2H85 A;  5IP9 I;  3I4N I;  1YIT 1;  3CCU Z;  2QKD A;  3CCM 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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