3GTP | Genus

Total Genus 8

Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	8
sequence length	119
structure length	119
Chain Sequence	TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__17855567507949033__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__17855567507949033__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/3GTP/I/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__17855567507949033__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"17855567507949033","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/3GTP/I/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__17855567507949033__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription, transferase/dna-rna hybrid
publication title	Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	8
structure length	119
sequence length	119
ec nomenclature
pdb deposition date	2009-03-27

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF01096	TFIIS_C	Transcription factor S-II (TFIIS)
I	PF02150	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3gtpI01
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3gtpI02

1DL6A 2K5RA 3CQZI 3S17I 3Q87A 4NB8A 3RZDI 3RZOI 1ZB9A 3M3YI 1I50I 3HOUI 4A3MI 3GTPI 1TWAI 3VMHA 4Y52I 4A3LI 2NVQI 2DE7A 1LQLA 3GTJI 3PO3S 3H3VJ 1TWGI 3VMIA 2JA7I 3GTQI 5IP7I 3S14I 2E2JI 2F4MA 3M4OI 1USPA 4XX2A 1USPB 2NVTI 2DE5A 2RBLA 1SFOI 1R9TI 5C44I 1TWCI 2AKLA 3S1QI 4X6AI 3D6WA 4NBDA 1TFIA 2E2HI 4A3JI 3S15I 3I4NI 3S2DI 4A3FI 1X3ZA 3GTOI 4A3CI 1Y1VS 2HF1A 3GTLI 1WW9A 1TWFI 3S1NI 3GTKI 4NBHA 4NBAA 3VMGA 4A3GI 2JA5I 3U50C 1TWHI 3HOZI 1Y1WI 1X3WA 4NBCA 3GKQA 2R7ZI 1PFTA 2JA8I 3S2HI 2R93I 3I07A 4A3II 4NOZA 4BXXI 3S1RI 1Y1VI 3ESWA 5C3EI 4MH4A 3VB9A 4NBGA 1I3QI 2P3YA 1QYPA 4NB9A 1RLYA 2PK7A 3FKII 1K83I 2E2II 3PO2I 2YU9I 5FLMI 4NBBA 1N2FA 4BY7I 3S16I 1NUIA 5CM2M 3HOXI 1I6HI 4A3DI 2J6AA 3GCFA 5C4XI 1ML8A 4A93I 2JNYA 1ZB8A 5IP9I 4BBRI 4QTUA 2VUMI 4BBSI 4NBFA 2JR6A 3GTMS 4QTTA 2JA6I 2JS4A 4Y7NI 2DE6A 3S1MI 3LUSA 1YUAA 3EERA 3HOVI 5C4JI 2NVXI 2BJOA 2KPIA 2B63I 1VLAA 3I4MI 3GTMI 1L1OC 3H0GI 2F4OA 4A3KI 3GTGI 3K7AI 1RO4A 1WCMI 2NVYI 4BY1I 4NBEA 3HOYI 4A3BI 2R92I 3HOWI 3PO3I 4A3EI
chains in the Genus database with same CATH superfamily

3QWUA 3CQZI 3CMEZ 4MXUA 3S17I 3CCV1 3Q87A 3RZDI 1ZB9A 3FQQA 1I50I 1Q862 1YHQ1 2W04A 2O53A 3GTPI 3G6E1 3VMHA 4Y52I 2OOXB 4A3LI 3CXCZ 2DE7A 1VQM1 2VPYA 5IT9f 2KI7B 1NJI1 1TWGI 3I551 3J80b 2NVTI 2RBLA 2Q4ZA 2QLVB 3CC7Z 2YADA 2WB1A 4NBDA 1Q822 3S2DI 2QKDA 2GTHA 2PM9A 2HF1A 1WW9A 1TWFI 1WZNA 3S1NI 4NBHA 2RHBA 1VQP1 1RO2A 2JA5I 3U50C 1TWHI 2QEX1 5D1OA 1NP6A 5D1OB 1FDIA 1RQFA 2R93I 4NOZA 1JJ2Z 3S1RI 1Y1VI 1VQL1 1JJ2Y 3MONA 1QVGZ 2V3VA 3J81f 2JUBA 2P28A 2VUGA 3CCJ1 1YJ91 1QXFA 1RLYA 2PK7A 3J80f 1K83I 1QF8A 3PO2I 2PMZA 3KIHA 2YU9I 5FLMI 4BY7I 1VQO1 1Q7Y2 5CM2M 1I6HI 3S16I 5FLXb 5C4XI 3I561 1K9M1 1WIIA 2RIQA 1ZB8A 1YI2Z 5T6BA 1P9NA 5IP9I 1VQ7Z 3CCS1 4NBFA 3NDJA 3GTMS 1YJN1 2OTJ1 4QTTA 2VPXA 3CCMZ 2IZ4A 1YHQZ 4NH1C 3S1MI 1YUAA 3HOVI 5AN9F 1YIJ1 2KPIA 2B63I 3I55Z 1RO4A 3CCU1 4E32A 2V8KA 1M1K1 2QA4Z 2R92I 2LFUA 1DL6A 4DQYB 2K5RA 2E7ZA 3CCQ1 1RNIA 2AYDA 5FLXf 3JAMb 3NDIA 4E33A 5D1PA 1TWAI 3MZKB 1Q812 1LQLA 3GTJI 1Q861 2QRCB 4RVGA 2M6NA 2JA7I 5IP7I 1QVFY 1KQSY 3G4S1 4E2ZA 1Y8CA 2LEXA 1YJW1 2V8JA 1R9TI 2M48A 1YJ9Z 1AA6A 1VQ91 3D6WA 3HKZA 1Q16A 1TFIA 2E2HI 4MRIA 3I4NI 3CXCY 3GTOI 1VQ51 1VQOZ 4MD9A 3GTLI 3CC41 3VMGA 3JAMf 2VF1A 1Q821 3CC2Z 4A3GI 4MD8A 2H85A 1VQK1 3CCE1 1X3WA 3CCSZ 2R7ZI 5A2Qb 3IFUA 3I07A 4BXXI 3CMA1 2OTJZ 2E9HA 3FQMA 1VQ61 3NH8A 3VB9A 2P3YA 1YIJZ 2E2II 4DK1A 2O4HA 1VQN1 2OZKA 4MONA 2RPRA 4RVFA 3HOXI 4A3DI 2J6AA 1ML8A 3CCUZ 4A93I 2JNYA 1Q7Y1 1WJ2A 4RS4A 4BBSI 4E2YA 4AYBA 3CCQZ 1QVGY 1K732 4Y7NI 3EERA 5C4JI 3D9XA 5A2Qf 3GTMI 3K7AI 3CD61 4S1TA 3HOYI 3CCRZ 4RVDA 1YJWZ 3PO3I 3CME1 2ZAEB 3RZOI 2V45A 3CCVZ 1KD12 4A3MI 1YIT1 1VQ81 1VQ9Z 1K8A1 3G6EZ 3J7A4 4DGLA 1W2BZ 2NVQI 1W2BY 2JIRA 1VQMZ 3PO3S 3D2LA 1VQ5Z 3H3VJ 3VMIA 3BG0B 3CC4Z 2JMOA 2K3RA 1Q811 3S14I 2E2JI 2F4MA 1USPA 3CCEZ 4XX2A 1USPB 2DE5A 2VPZA 3CMAZ 1S721 3CC71 5C44I 1TWCI 2AKLA 2LIYA 4E30A 2W03A 4A3JI 1N8R2 3NFZA 1VQNZ 1X3ZA 1FDOA 3BG1B 2JIOA 3VTNA 1VQPZ 2QEXZ 3HOZI 1Y1WI 3IX0A 4NBCA 1M902 1PFTA 3S2HI 4A3II 5IT9b 2R6MA 3ESWA 3CCL1 1VQLZ 5C3EI 1VQ41 3KIFA 4MH4A 3NH5A 3CCJZ 1QYPA 2I3CA 3FKII 3IR7A 3IF8A 2QR1B 3I56Z 3CD6Z 1VQ71 1X0TA 1YUKA 3G711 4BBRI 3CPWZ 4QTUA 2RT9A 3CPWY 2OTL1 2JR6A 4CL1A 2EGTA 1YJNZ 2JA6I 3CCM1 3NH4A 2DE6A 1YITZ 3LUSA 1VQ8Z 3F3FC 1JWHC 1VLAA 2Q51A 3I4MI 1K731 1KC82 3J81b 4A3KI 2F4OA 4EWCA 1ZH1A 3MZLB 4E2WA 2QA41 4BY1I 3T4NB 4A3BI 1S72Z 2V8IA 2VPWA 2GTIA 4NB8A 4NFRA 3M3YI 3HOUI 4HGYA 1NJI2 2IZ3A 3OW2Z 2OOYB 3OW2Y 3P5JB 2HU9A 1KD11 3GTQI 3G4SZ 2WAQA 4RVHA 3M4OI 3F3PC 4HGZA 1RO0A 4E31A 1SFOI 2G2KA 3CCLZ 1VQ4Z 2JIQA 2Y0SA 3S1QI 4X6AI 5T64A 3S15I 4A3FI 4A3CI 1Y1VS 4TNUA 1Z02A 3GTKI 4NBAA 3CC21 4HH4A 1SIWA 1N8R1 2IV2X 2JIPA 3G71Z 5T67A 1VQKZ 3GKQA 2JA8I 2OTLZ 4E2XA 1M901 1VQ6Z 1S7MA 4NBGA 1I3QI 4NB9A 1K9M2 1Z03A 4NBBA 1N2FA 1NUIA 3TDHB 3GCFA 4RV9A 2VUMI 1K8A2 2QRDB 4MD7A 2GU2A 2JIMA 2JS4A 5LL6f 2NVXI 1Z01A 2BJOA 3EEDA 1M1K2 3TE5B 1KRLA 1L1OC 2NAPA 1QVFZ 3H0GI 1KQSZ 3GTGI 2QREB 1WCMI 2NVYI 1KC81 4NBEA 3CCR1 1YI21 3HOWI 4A3EI
chains in the Genus database with same CATH topology

3QWUA 3CQZI 3CMEZ 4MXUA 3S17I 3CCV1 3Q87A 3RZDI 1ZB9A 3FQQA 1I50I 1Q862 1YHQ1 2W04A 2O53A 3GTPI 3G6E1 3VMHA 4Y52I 2OOXB 4A3LI 3CXCZ 2DE7A 1VQM1 5IT9f 2KI7B 1NJI1 1TWGI 3I551 3J80b 2NVTI 2RBLA 2Q4ZA 2QLVB 3CC7Z 2YADA 2WB1A 4NBDA 1Q822 3S2DI 2QKDA 2GTHA 2PM9A 2HF1A 1WW9A 1TWFI 3S1NI 4NBHA 2RHBA 1VQP1 1RO2A 2JA5I 3U50C 1TWHI 2QEX1 5D1OA 1NP6A 5D1OB 1RQFA 2R93I 4NOZA 1JJ2Z 3S1RI 1Y1VI 1VQL1 1JJ2Y 3MONA 1QVGZ 3J81f 2JUBA 2P28A 2VUGA 3CCJ1 1YJ91 1RLYA 2PK7A 3J80f 1K83I 1QF8A 3PO2I 2PMZA 3KIHA 2YU9I 5FLMI 4BY7I 1VQO1 1Q7Y2 5CM2M 1I6HI 3S16I 5FLXb 5C4XI 3I561 1K9M1 1WIIA 2RIQA 1ZB8A 1YI2Z 5T6BA 1P9NA 5IP9I 1VQ7Z 3CCS1 4NBFA 3NDJA 3GTMS 1YJN1 2OTJ1 4QTTA 3CCMZ 2IZ4A 1YHQZ 4NH1C 3S1MI 1YUAA 3HOVI 5AN9F 1YIJ1 2KPIA 2B63I 3I55Z 1RO4A 3CCU1 4E32A 2V8KA 1M1K1 2QA4Z 2R92I 2LFUA 1DL6A 4DQYB 2K5RA 3CCQ1 1RNIA 5FLXf 3JAMb 3NDIA 4E33A 5D1PA 1TWAI 3MZKB 1Q812 1LQLA 3GTJI 1Q861 2QRCB 4RVGA 2M6NA 2JA7I 5IP7I 1QVFY 1KQSY 3G4S1 4E2ZA 1YJW1 2V8JA 1R9TI 2M48A 1YJ9Z 1VQ91 3D6WA 3HKZA 2E2HI 1TFIA 4MRIA 3I4NI 3CXCY 3GTOI 1VQ51 1VQOZ 4MD9A 3GTLI 3CC41 3VMGA 3JAMf 2VF1A 1Q821 3CC2Z 4A3GI 4MD8A 2H85A 1VQK1 3CCE1 1X3WA 3CCSZ 2R7ZI 5A2Qb 3IFUA 3I07A 4BXXI 3CMA1 2OTJZ 2E9HA 3FQMA 1VQ61 3NH8A 3VB9A 2P3YA 1YIJZ 2E2II 4DK1A 2O4HA 1VQN1 2OZKA 4MONA 2RPRA 4RVFA 3HOXI 4A3DI 2J6AA 1ML8A 3CCUZ 4A93I 2JNYA 1Q7Y1 4RS4A 4BBSI 4E2YA 4AYBA 3CCQZ 1QVGY 1K732 4Y7NI 3EERA 5C4JI 3D9XA 5A2Qf 3GTMI 3K7AI 3CD61 4S1TA 3HOYI 3CCRZ 4RVDA 1YJWZ 3PO3I 3CME1 2ZAEB 3RZOI 3CCVZ 1KD12 4A3MI 1YIT1 1VQ81 1VQ9Z 1K8A1 3G6EZ 3J7A4 4DGLA 1W2BZ 2NVQI 1W2BY 1VQMZ 3PO3S 1VQ5Z 3H3VJ 3VMIA 3BG0B 3CC4Z 2JMOA 2K3RA 1Q811 3S14I 2E2JI 2F4MA 1USPA 3CCEZ 4XX2A 1USPB 2DE5A 3CMAZ 1S721 3CC71 5C44I 1TWCI 2AKLA 2LIYA 4E30A 2W03A 4A3JI 1N8R2 3NFZA 1VQNZ 1X3ZA 3BG1B 3VTNA 1VQPZ 2QEXZ 3HOZI 1Y1WI 3IX0A 4NBCA 1M902 1PFTA 3S2HI 4A3II 5IT9b 2R6MA 3ESWA 3CCL1 1VQLZ 5C3EI 1VQ41 3KIFA 4MH4A 3NH5A 3CCJZ 1QYPA 2I3CA 3FKII 3IF8A 2QR1B 3I56Z 3CD6Z 1VQ71 1X0TA 1YUKA 3G711 4BBRI 3CPWZ 4QTUA 2RT9A 3CPWY 2OTL1 2JR6A 4CL1A 2EGTA 1YJNZ 2JA6I 3CCM1 3NH4A 2DE6A 1YITZ 3LUSA 1VQ8Z 3F3FC 1JWHC 1VLAA 2Q51A 3I4MI 1K731 1KC82 3J81b 4A3KI 2F4OA 4EWCA 1ZH1A 3MZLB 4E2WA 2QA41 4BY1I 3T4NB 4A3BI 1S72Z 2V8IA 2GTIA 4NB8A 4NFRA 3M3YI 3HOUI 4HGYA 1NJI2 2IZ3A 3OW2Z 2OOYB 3OW2Y 3P5JB 2HU9A 1KD11 3GTQI 3G4SZ 2WAQA 4RVHA 3M4OI 3F3PC 4HGZA 1RO0A 4E31A 1SFOI 2G2KA 3CCLZ 1VQ4Z 2Y0SA 3S1QI 4X6AI 5T64A 3S15I 4A3FI 4A3CI 1Y1VS 4TNUA 1Z02A 3GTKI 4NBAA 4HH4A 3CC21 1N8R1 3G71Z 5T67A 1VQKZ 3GKQA 2JA8I 2OTLZ 4E2XA 1M901 1VQ6Z 1S7MA 4NBGA 1I3QI 4NB9A 1K9M2 1Z03A 4NBBA 1N2FA 1NUIA 3TDHB 3GCFA 4RV9A 2VUMI 1K8A2 2QRDB 4MD7A 2GU2A 2JS4A 5LL6f 2NVXI 1Z01A 2BJOA 3EEDA 1M1K2 3TE5B 1KRLA 1L1OC 1QVFZ 3H0GI 1KQSZ 3GTGI 2QREB 1WCMI 2NVYI 1KC81 4NBEA 3CCR1 1YI21 3HOWI 4A3EI
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1DL6 A;  2K5R A;  3CQZ I;  3S17 I;  3Q87 A;  4NB8 A;  3RZD I;  3RZO I;  1ZB9 A;  3M3Y I;  1I50 I;  3HOU I;  4A3M I;  3GTP I;  1TWA I;  3VMH A;  4Y52 I;  4A3L I;  2NVQ I;  2DE7 A;  1LQL A;  3GTJ I;  3PO3 S;  3H3V J;  1TWG I;  3VMI A;  2JA7 I;  3GTQ I;  5IP7 I;  3S14 I;  2E2J I;  2F4M A;  3M4O I;  1USP A;  4XX2 A;  1USP B;  2NVT I;  2DE5 A;  2RBL A;  1SFO I;  1R9T I;  5C44 I;  1TWC I;  2AKL A;  3S1Q I;  4X6A I;  3D6W A;  4NBD A;  1TFI A;  2E2H I;  4A3J I;  3S15 I;  3I4N I;  3S2D I;  4A3F I;  1X3Z A;  3GTO I;  4A3C I;  1Y1V S;  2HF1 A;  3GTL I;  1WW9 A;  1TWF I;  3S1N I;  3GTK I;  4NBH A;  4NBA A;  3VMG A;  4A3G I;  2JA5 I;  3U50 C;  1TWH I;  3HOZ I;  1Y1W I;  1X3W A;  4NBC A;  3GKQ A;  2R7Z I;  1PFT A;  2JA8 I;  3S2H I;  2R93 I;  3I07 A;  4A3I I;  4NOZ A;  4BXX I;  3S1R I;  1Y1V I;  3ESW A;  5C3E I;  4MH4 A;  3VB9 A;  4NBG A;  1I3Q I;  2P3Y A;  1QYP A;  4NB9 A;  1RLY A;  2PK7 A;  3FKI I;  1K83 I;  2E2I I;  3PO2 I;  2YU9 I;  5FLM I;  4NBB A;  1N2F A;  4BY7 I;  3S16 I;  1NUI A;  5CM2 M;  3HOX I;  1I6H I;  4A3D I;  2J6A A;  3GCF A;  5C4X I;  1ML8 A;  4A93 I;  2JNY A;  1ZB8 A;  5IP9 I;  4BBR I;  4QTU A;  2VUM I;  4BBS I;  4NBF A;  2JR6 A;  3GTM S;  4QTT A;  2JA6 I;  2JS4 A;  4Y7N I;  2DE6 A;  3S1M I;  3LUS A;  1YUA A;  3EER A;  3HOV I;  5C4J I;  2NVX I;  2BJO A;  2KPI A;  2B63 I;  1VLA A;  3I4M I;  3GTM I;  1L1O C;  3H0G I;  2F4O A;  4A3K I;  3GTG I;  3K7A I;  1RO4 A;  1WCM I;  2NVY I;  4BY1 I;  4NBE A;  3HOY I;  4A3B I;  2R92 I;  3HOW I;  3PO3 I;  4A3E I; 
#chains in the Genus database with same CATH topology
 3QWU A;  3CQZ I;  3CME Z;  4MXU A;  3S17 I;  3CCV 1;  3Q87 A;  3RZD I;  1ZB9 A;  3FQQ A;  1I50 I;  1Q86 2;  1YHQ 1;  2W04 A;  2O53 A;  3GTP I;  3G6E 1;  3VMH A;  4Y52 I;  2OOX B;  4A3L I;  3CXC Z;  2DE7 A;  1VQM 1;  2VPY A;  5IT9 f;  2KI7 B;  1NJI 1;  1TWG I;  3I55 1;  3J80 b;  2NVT I;  2RBL A;  2Q4Z A;  2QLV B;  3CC7 Z;  2YAD A;  2WB1 A;  4NBD A;  1Q82 2;  3S2D I;  2QKD A;  2GTH A;  2PM9 A;  2HF1 A;  1WW9 A;  1TWF I;  1WZN A;  3S1N I;  4NBH A;  2RHB A;  1VQP 1;  1RO2 A;  2JA5 I;  3U50 C;  1TWH I;  2QEX 1;  5D1O A;  1NP6 A;  5D1O B;  1FDI A;  1RQF A;  2R93 I;  4NOZ A;  1JJ2 Z;  3S1R I;  1Y1V I;  1VQL 1;  1JJ2 Y;  3MON A;  1QVG Z;  2V3V A;  3J81 f;  2JUB A;  2P28 A;  2VUG A;  3CCJ 1;  1YJ9 1;  1QXF A;  1RLY A;  2PK7 A;  3J80 f;  1K83 I;  1QF8 A;  3PO2 I;  2PMZ A;  3KIH A;  2YU9 I;  5FLM I;  4BY7 I;  1VQO 1;  1Q7Y 2;  5CM2 M;  1I6H I;  3S16 I;  5FLX b;  5C4X I;  3I56 1;  1K9M 1;  1WII A;  2RIQ A;  1ZB8 A;  1YI2 Z;  5T6B A;  1P9N A;  5IP9 I;  1VQ7 Z;  3CCS 1;  4NBF A;  3NDJ A;  3GTM S;  1YJN 1;  2OTJ 1;  4QTT A;  2VPX A;  3CCM Z;  2IZ4 A;  1YHQ Z;  4NH1 C;  3S1M I;  1YUA A;  3HOV I;  5AN9 F;  1YIJ 1;  2KPI A;  2B63 I;  3I55 Z;  1RO4 A;  3CCU 1;  4E32 A;  2V8K A;  1M1K 1;  2QA4 Z;  2R92 I;  2LFU A;  1DL6 A;  4DQY B;  2K5R A;  2E7Z A;  3CCQ 1;  1RNI A;  2AYD A;  5FLX f;  3JAM b;  3NDI A;  4E33 A;  5D1P A;  1TWA I;  3MZK B;  1Q81 2;  1LQL A;  3GTJ I;  1Q86 1;  2QRC B;  4RVG A;  2M6N A;  2JA7 I;  5IP7 I;  1QVF Y;  1KQS Y;  3G4S 1;  4E2Z A;  1Y8C A;  2LEX A;  1YJW 1;  2V8J A;  1R9T I;  2M48 A;  1YJ9 Z;  1AA6 A;  1VQ9 1;  3D6W A;  3HKZ A;  1Q16 A;  1TFI A;  2E2H I;  4MRI A;  3I4N I;  3CXC Y;  3GTO I;  1VQ5 1;  1VQO Z;  4MD9 A;  3GTL I;  3CC4 1;  3VMG A;  3JAM f;  2VF1 A;  1Q82 1;  3CC2 Z;  4A3G I;  4MD8 A;  2H85 A;  1VQK 1;  3CCE 1;  1X3W A;  3CCS Z;  2R7Z I;  5A2Q b;  3IFU A;  3I07 A;  4BXX I;  3CMA 1;  2OTJ Z;  2E9H A;  3FQM A;  1VQ6 1;  3NH8 A;  3VB9 A;  2P3Y A;  1YIJ Z;  2E2I I;  4DK1 A;  2O4H A;  1VQN 1;  2OZK A;  4MON A;  2RPR A;  4RVF A;  3HOX I;  4A3D I;  2J6A A;  1ML8 A;  3CCU Z;  4A93 I;  2JNY A;  1Q7Y 1;  1WJ2 A;  4RS4 A;  4BBS I;  4E2Y A;  4AYB A;  3CCQ Z;  1QVG Y;  1K73 2;  4Y7N I;  3EER A;  5C4J I;  3D9X A;  5A2Q f;  3GTM I;  3K7A I;  3CD6 1;  4S1T A;  3HOY I;  3CCR Z;  4RVD A;  1YJW Z;  3PO3 I;  3CME 1;  2ZAE B;  3RZO I;  2V45 A;  3CCV Z;  1KD1 2;  4A3M I;  1YIT 1;  1VQ8 1;  1VQ9 Z;  1K8A 1;  3G6E Z;  3J7A 4;  4DGL A;  1W2B Z;  2NVQ I;  1W2B Y;  2JIR A;  1VQM Z;  3PO3 S;  3D2L A;  1VQ5 Z;  3H3V J;  3VMI A;  3BG0 B;  3CC4 Z;  2JMO A;  2K3R A;  1Q81 1;  3S14 I;  2E2J I;  2F4M A;  1USP A;  3CCE Z;  4XX2 A;  1USP B;  2DE5 A;  2VPZ A;  3CMA Z;  1S72 1;  3CC7 1;  5C44 I;  1TWC I;  2AKL A;  2LIY A;  4E30 A;  2W03 A;  4A3J I;  1N8R 2;  3NFZ A;  1VQN Z;  1X3Z A;  1FDO A;  3BG1 B;  2JIO A;  3VTN A;  1VQP Z;  2QEX Z;  3HOZ I;  1Y1W I;  3IX0 A;  4NBC A;  1M90 2;  1PFT A;  3S2H I;  4A3I I;  5IT9 b;  2R6M A;  3ESW A;  3CCL 1;  1VQL Z;  5C3E I;  1VQ4 1;  3KIF A;  4MH4 A;  3NH5 A;  3CCJ Z;  1QYP A;  2I3C A;  3FKI I;  3IR7 A;  3IF8 A;  2QR1 B;  3I56 Z;  3CD6 Z;  1VQ7 1;  1X0T A;  1YUK A;  3G71 1;  4BBR I;  3CPW Z;  4QTU A;  2RT9 A;  3CPW Y;  2OTL 1;  2JR6 A;  4CL1 A;  2EGT A;  1YJN Z;  2JA6 I;  3CCM 1;  3NH4 A;  2DE6 A;  1YIT Z;  3LUS A;  1VQ8 Z;  3F3F C;  1JWH C;  1VLA A;  2Q51 A;  3I4M I;  1K73 1;  1KC8 2;  3J81 b;  4A3K I;  2F4O A;  4EWC A;  1ZH1 A;  3MZL B;  4E2W A;  2QA4 1;  4BY1 I;  3T4N B;  4A3B I;  1S72 Z;  2V8I A;  2VPW A;  2GTI A;  4NB8 A;  4NFR A;  3M3Y I;  3HOU I;  4HGY A;  1NJI 2;  2IZ3 A;  3OW2 Z;  2OOY B;  3OW2 Y;  3P5J B;  2HU9 A;  1KD1 1;  3GTQ I;  3G4S Z;  2WAQ A;  4RVH A;  3M4O I;  3F3P C;  4HGZ A;  1RO0 A;  4E31 A;  1SFO I;  2G2K A;  3CCL Z;  1VQ4 Z;  2JIQ A;  2Y0S A;  3S1Q I;  4X6A I;  5T64 A;  3S15 I;  4A3F I;  4A3C I;  1Y1V S;  4TNU A;  1Z02 A;  3GTK I;  4NBA A;  3CC2 1;  4HH4 A;  1SIW A;  1N8R 1;  2IV2 X;  2JIP A;  3G71 Z;  5T67 A;  1VQK Z;  3GKQ A;  2JA8 I;  2OTL Z;  4E2X A;  1M90 1;  1VQ6 Z;  1S7M A;  4NBG A;  1I3Q I;  4NB9 A;  1K9M 2;  1Z03 A;  4NBB A;  1N2F A;  1NUI A;  3TDH B;  3GCF A;  4RV9 A;  2VUM I;  1K8A 2;  2QRD B;  4MD7 A;  2GU2 A;  2JIM A;  2JS4 A;  5LL6 f;  2NVX I;  1Z01 A;  2BJO A;  3EED A;  1M1K 2;  3TE5 B;  1KRL A;  1L1O C;  2NAP A;  1QVF Z;  3H0G I;  1KQS Z;  3GTG I;  2QRE B;  1WCM I;  2NVY I;  1KC8 1;  4NBE A;  3CCR 1;  1YI2 1;  3HOW I;  4A3E I; 
#chains in the Genus database with same CATH homology
 3QWU A;  3CQZ I;  3CME Z;  4MXU A;  3S17 I;  3CCV 1;  3Q87 A;  3RZD I;  1ZB9 A;  3FQQ A;  1I50 I;  1Q86 2;  1YHQ 1;  2W04 A;  2O53 A;  3GTP I;  3G6E 1;  3VMH A;  4Y52 I;  2OOX B;  4A3L I;  3CXC Z;  2DE7 A;  1VQM 1;  5IT9 f;  2KI7 B;  1NJI 1;  1TWG I;  3I55 1;  3J80 b;  2NVT I;  2RBL A;  2Q4Z A;  2QLV B;  3CC7 Z;  2YAD A;  2WB1 A;  4NBD A;  1Q82 2;  3S2D I;  2QKD A;  2GTH A;  2PM9 A;  2HF1 A;  1WW9 A;  1TWF I;  3S1N I;  4NBH A;  2RHB A;  1VQP 1;  1RO2 A;  2JA5 I;  3U50 C;  1TWH I;  2QEX 1;  5D1O A;  1NP6 A;  5D1O B;  1RQF A;  2R93 I;  4NOZ A;  1JJ2 Z;  3S1R I;  1Y1V I;  1VQL 1;  1JJ2 Y;  3MON A;  1QVG Z;  3J81 f;  2JUB A;  2P28 A;  2VUG A;  3CCJ 1;  1YJ9 1;  1RLY A;  2PK7 A;  3J80 f;  1K83 I;  1QF8 A;  3PO2 I;  2PMZ A;  3KIH A;  2YU9 I;  5FLM I;  4BY7 I;  1VQO 1;  1Q7Y 2;  5CM2 M;  1I6H I;  3S16 I;  5FLX b;  5C4X I;  3I56 1;  1K9M 1;  1WII A;  2RIQ A;  1ZB8 A;  1YI2 Z;  5T6B A;  1P9N A;  5IP9 I;  1VQ7 Z;  3CCS 1;  4NBF A;  3NDJ A;  3GTM S;  1YJN 1;  2OTJ 1;  4QTT A;  3CCM Z;  2IZ4 A;  1YHQ Z;  4NH1 C;  3S1M I;  1YUA A;  3HOV I;  5AN9 F;  1YIJ 1;  2KPI A;  2B63 I;  3I55 Z;  1RO4 A;  3CCU 1;  4E32 A;  2V8K A;  1M1K 1;  2QA4 Z;  2R92 I;  2LFU A;  1DL6 A;  4DQY B;  2K5R A;  3CCQ 1;  1RNI A;  5FLX f;  3JAM b;  3NDI A;  4E33 A;  5D1P A;  1TWA I;  3MZK B;  1Q81 2;  1LQL A;  3GTJ I;  1Q86 1;  2QRC B;  4RVG A;  2M6N A;  2JA7 I;  5IP7 I;  1QVF Y;  1KQS Y;  3G4S 1;  4E2Z A;  1YJW 1;  2V8J A;  1R9T I;  2M48 A;  1YJ9 Z;  1VQ9 1;  3D6W A;  3HKZ A;  2E2H I;  1TFI A;  4MRI A;  3I4N I;  3CXC Y;  3GTO I;  1VQ5 1;  1VQO Z;  4MD9 A;  3GTL I;  3CC4 1;  3VMG A;  3JAM f;  2VF1 A;  1Q82 1;  3CC2 Z;  4A3G I;  4MD8 A;  2H85 A;  1VQK 1;  3CCE 1;  1X3W A;  3CCS Z;  2R7Z I;  5A2Q b;  3IFU A;  3I07 A;  4BXX I;  3CMA 1;  2OTJ Z;  2E9H A;  3FQM A;  1VQ6 1;  3NH8 A;  3VB9 A;  2P3Y A;  1YIJ Z;  2E2I I;  4DK1 A;  2O4H A;  1VQN 1;  2OZK A;  4MON A;  2RPR A;  4RVF A;  3HOX I;  4A3D I;  2J6A A;  1ML8 A;  3CCU Z;  4A93 I;  2JNY A;  1Q7Y 1;  4RS4 A;  4BBS I;  4E2Y A;  4AYB A;  3CCQ Z;  1QVG Y;  1K73 2;  4Y7N I;  3EER A;  5C4J I;  3D9X A;  5A2Q f;  3GTM I;  3K7A I;  3CD6 1;  4S1T A;  3HOY I;  3CCR Z;  4RVD A;  1YJW Z;  3PO3 I;  3CME 1;  2ZAE B;  3RZO I;  3CCV Z;  1KD1 2;  4A3M I;  1YIT 1;  1VQ8 1;  1VQ9 Z;  1K8A 1;  3G6E Z;  3J7A 4;  4DGL A;  1W2B Z;  2NVQ I;  1W2B Y;  1VQM Z;  3PO3 S;  1VQ5 Z;  3H3V J;  3VMI A;  3BG0 B;  3CC4 Z;  2JMO A;  2K3R A;  1Q81 1;  3S14 I;  2E2J I;  2F4M A;  1USP A;  3CCE Z;  4XX2 A;  1USP B;  2DE5 A;  3CMA Z;  1S72 1;  3CC7 1;  5C44 I;  1TWC I;  2AKL A;  2LIY A;  4E30 A;  2W03 A;  4A3J I;  1N8R 2;  3NFZ A;  1VQN Z;  1X3Z A;  3BG1 B;  3VTN A;  1VQP Z;  2QEX Z;  3HOZ I;  1Y1W I;  3IX0 A;  4NBC A;  1M90 2;  1PFT A;  3S2H I;  4A3I I;  5IT9 b;  2R6M A;  3ESW A;  3CCL 1;  1VQL Z;  5C3E I;  1VQ4 1;  3KIF A;  4MH4 A;  3NH5 A;  3CCJ Z;  1QYP A;  2I3C A;  3FKI I;  3IF8 A;  2QR1 B;  3I56 Z;  3CD6 Z;  1VQ7 1;  1X0T A;  1YUK A;  3G71 1;  4BBR I;  3CPW Z;  4QTU A;  2RT9 A;  3CPW Y;  2OTL 1;  2JR6 A;  4CL1 A;  2EGT A;  1YJN Z;  2JA6 I;  3CCM 1;  3NH4 A;  2DE6 A;  1YIT Z;  3LUS A;  1VQ8 Z;  3F3F C;  1JWH C;  1VLA A;  2Q51 A;  3I4M I;  1K73 1;  1KC8 2;  3J81 b;  4A3K I;  2F4O A;  4EWC A;  1ZH1 A;  3MZL B;  4E2W A;  2QA4 1;  4BY1 I;  3T4N B;  4A3B I;  1S72 Z;  2V8I A;  2GTI A;  4NB8 A;  4NFR A;  3M3Y I;  3HOU I;  4HGY A;  1NJI 2;  2IZ3 A;  3OW2 Z;  2OOY B;  3OW2 Y;  3P5J B;  2HU9 A;  1KD1 1;  3GTQ I;  3G4S Z;  2WAQ A;  4RVH A;  3M4O I;  3F3P C;  4HGZ A;  1RO0 A;  4E31 A;  1SFO I;  2G2K A;  3CCL Z;  1VQ4 Z;  2Y0S A;  3S1Q I;  4X6A I;  5T64 A;  3S15 I;  4A3F I;  4A3C I;  1Y1V S;  4TNU A;  1Z02 A;  3GTK I;  4NBA A;  4HH4 A;  3CC2 1;  1N8R 1;  3G71 Z;  5T67 A;  1VQK Z;  3GKQ A;  2JA8 I;  2OTL Z;  4E2X A;  1M90 1;  1VQ6 Z;  1S7M A;  4NBG A;  1I3Q I;  4NB9 A;  1K9M 2;  1Z03 A;  4NBB A;  1N2F A;  1NUI A;  3TDH B;  3GCF A;  4RV9 A;  2VUM I;  1K8A 2;  2QRD B;  4MD7 A;  2GU2 A;  2JS4 A;  5LL6 f;  2NVX I;  1Z01 A;  2BJO A;  3EED A;  1M1K 2;  3TE5 B;  1KRL A;  1L1O C;  1QVF Z;  3H0G I;  1KQS Z;  3GTG I;  2QRE B;  1WCM I;  2NVY I;  1KC8 1;  4NBE A;  3CCR 1;  1YI2 1;  3HOW I;  4A3E I;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

3GTPI

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations