3HOY | Genus

Total Genus 13

Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	13
sequence length	119
structure length	119
Chain Sequence	TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__108849296768094__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__108849296768094__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/3HOY/I/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__108849296768094__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"108849296768094","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/3HOY/I/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__108849296768094__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription,transferase/dna/rna hybrid
publication title	Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	13
structure length	119
sequence length	119
ec nomenclature
pdb deposition date	2009-06-03

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF01096	TFIIS_C	Transcription factor S-II (TFIIS)
I	PF02150	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3hoyI01
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3hoyI02

4NBHA 3PO3I 1I50I 2F4OA 2HF1A 4NBEA 3I4NI 3GTMI 3S1NI 3VMIA 3S17I 4BBRI 1TWAI 1X3WA 2VUMI 2NVQI 3I07A 1I3QI 4BBSI 2DE6A 3M3YI 3S2DI 2JA8I 2JNYA 3HOZI 1LQLA 3RZOI 1RLYA 4Y7NI 3VMHA 3HOXI 1ZB8A 5IP9I 2JR6A 5C4JI 1TWCI 5C4XI 1YUAA 4NBFA 4NBGA 3HOWI 2K5RA 4A3KI 3GCFA 4NBDA 3VMGA 4NB9A 3PO2I 3S1QI 1Y1VI 2R92I 1ZB9A 4QTTA 2B63I 4A3DI 2JA7I 1TWHI 2KPIA 3S14I 3S2HI 3H3VJ 3GKQA 3RZDI 1USPB 4A3GI 4A3II 2DE5A 3S1RI 2E2JI 1K83I 1WCMI 2R7ZI 4A3EI 1R9TI 3S1MI 1QYPA 1I6HI 1USPA 3S16I 1TWGI 3D6WA 4Y52I 4NBBA 2NVXI 3GTOI 1DL6A 4A3MI 3EERA 2AKLA 3U50C 1N2FA 3HOYI 4NOZA 5CM2M 2R93I 4BY7I 2JA6I 4QTUA 2E2HI 4BY1I 3K7AI 1VLAA 1L1OC 3GTLI 1NUIA 2DE7A 2PK7A 3FKII 2JA5I 3GTPI 4XX2A 4NB8A 2RBLA 3LUSA 3I4MI 1PFTA 3Q87A 3ESWA 4A3BI 3GTQI 3PO3S 2NVTI 1RO4A 3GTMS 1SFOI 3H0GI 4NBAA 4A3FI 4A93I 1Y1WI 5IP7I 3M4OI 2YU9I 1WW9A 4MH4A 4A3LI 4NBCA 1ML8A 2P3YA 2F4MA 3CQZI 3VB9A 4X6AI 3GTKI 3HOUI 2J6AA 5FLMI 3S15I 2JS4A 5C3EI 2E2II 3HOVI 4BXXI 1TWFI 4A3CI 2NVYI 4A3JI 1X3ZA 5C44I 3GTJI 1TFIA 2BJOA 1Y1VS 3GTGI
chains in the Genus database with same CATH superfamily

2RHBA 4NBEA 3GTMI 3NH5A 3CCQ1 4E33A 1Z01A 2QEX1 1YI2Z 3M3YI 3S2DI 2JA8I 3I56Z 1S721 1VQ9Z 2KI7B 1RLYA 4Y7NI 3VMHA 1KC81 1TWCI 2AYDA 3IFUA 3CCR1 4MD9A 3HOWI 4MD7A 1Y1VI 3CCM1 3F3PC 3EEDA 1RO2A 1VQ51 1YJWZ 2ZAEB 3NDIA 3G6E1 3CC41 1Z02A 3S14I 3KIHA 1KQSZ 3GKQA 3RZDI 3BG0B 1QVFY 4A3GI 4A3II 3T4NB 1NJI1 2P28A 1VQM1 3QWUA 3J81f 2V45A 4E30A 3D6WA 3CCV1 2YADA 4NBBA 3GTOI 1DL6A 4A3MI 3U50C 1N2FA 2E7ZA 2R93I 2WAQA 4BY1I 1VQKZ 2EGTA 1VQ7Z 3HKZA 3TDHB 2RBLA 4AYBA 3CMAZ 2QA4Z 3Q87A 3OW2Y 2QR1B 2QEXZ 1RO4A 1QVGZ 1JJ2Y 4NBAA 5T67A 3JAMf 1Q16A 2V8JA 1WW9A 3J81b 1YUKA 3CPWY 2V8IA 3CCSZ 2F4MA 3CQZI 3CCRZ 2J6AA 5FLMI 1KC82 3I551 1TWFI 3CCJ1 1X3ZA 3CCMZ 3GTJI 1VQ5Z 3G6EZ 3CC4Z 3GTGI 1I50I 2F4OA 3I4NI 1VQOZ 3CD61 1TWAI 1YJ91 1X3WA 2VUMI 1VQMZ 2DE6A 1YHQ1 4MXUA 3CME1 4RVGA 3HOXI 2Q4ZA 2K3RA 1QVFZ 1Q821 5C4XI 1K9M1 1YIT1 4MD8A 4NH1C 3P5JB 1Q861 3PO2I 4NB9A 3S1QI 2JIQA 2R92I 1YIJZ 4QTTA 4A3DI 1TWHI 3MZKB 3CXCY 1S7MA 1USPB 2M6NA 3IF8A 3MZLB 2OTJ1 3FQQA 2DE5A 2GTIA 2VPZA 3MONA 2R7ZI 5A2Qf 2O4HA 5D1PA 3S1MI 1N8R1 4Y52I 4E31A 2QKDA 3G4SZ 5T64A 2AKLA 1VQ81 2RT9A 5FLXf 3OW2Z 2JA6I 2IZ3A 3I55Z 2I3CA 2PMZA 2JIPA 2VPYA 3K7AI 2HU9A 3GTLI 1X0TA 1SIWA 4E2ZA 2PK7A 3FKII 3NH4A 3CCE1 3CPWZ 1WIIA 2VF1A 3LUSA 1YJ9Z 4A3BI 2GU2A 2JIMA 3GTMS 1SFOI 3H0GI 1Q7Y1 4NFRA 4EWCA 5T6BA 1YJNZ 2YU9I 5A2Qb 1VQ41 4RVDA 3VB9A 3GTKI 1Q822 5C3EI 3CC2Z 1K9M2 4BXXI 5FLXb 2NVYI 1WJ2A 4A3JI 2RPRA 5C44I 3G711 3CCQZ 2O53A 1Y1VS 3FQMA 2E9HA 3PO3I 1VQP1 3S1NI 1M1K1 4E2WA 2OTJZ 1S72Z 4TNUA 2JNYA 3NFZA 3RZOI 2NAPA 4DK1A 1VQ8Z 1N8R2 4HGZA 5IP9I 2JR6A 3I561 3CXCZ 2IV2X 5C4JI 1YUAA 4NBFA 4E2XA 2K5RA 4A3KI 2VPWA 4MONA 1KQSY 2WB1A 2OTL1 3D2LA 2JA7I 2KPIA 2Q51A 3S2HI 1NJI2 3H3VJ 3KIFA 3S1RI 3CCVZ 1YJW1 1M901 1VQN1 2JIRA 4A3EI 1R9TI 1QYPA 1I6HI 1USPA 2OZKA 3S16I 1TWGI 1Q7Y2 2GTHA 2Y0SA 1W2BY 1VQ4Z 2NVXI 1RQFA 3HOYI 3CCL1 4NOZA 1NP6A 3D9XA 1Z03A 3J80f 4BY7I 2E2HI 3CC71 2QREB 1L1OC 1K731 4RS4A 2DE7A 2JA5I 1KRLA 3G71Z 4XX2A 3NH8A 4E2YA 1VQPZ 3I4MI 1FDOA 2W03A 1VQL1 1KD11 2VUGA 3IR7A 3GTQI 1M1K2 2NVTI 2QA41 5AN9F 4A93I 2JIOA 1WZNA 1Y1WI 5IP7I 3M4OI 2LIYA 2LEXA 4MH4A 3VTNA 4A3LI 2M48A 4NBCA 1JJ2Z 4MRIA 2V3VA 2P3YA 3CCJZ 4E32A 5D1OB 3HOUI 3S15I 2W04A 2JS4A 1P9NA 1ZH1A 2E2II 3HOVI 1JWHC 4A3CI 3CCS1 3J80b 1K8A1 1VQ61 3J7A4 3CD6Z 2OTLZ 2BJOA 4NBHA 2V8KA 1YHQZ 2HF1A 3CCU1 3VMIA 3CMEZ 3S17I 4BBRI 1RO0A 1Y8CA 3I07A 2NVQI 4RV9A 1I3QI 4BBSI 1VQNZ 5IT9f 1VQO1 4HH4A 3HOZI 1M902 1LQLA 1FDIA 4RVFA 1YITZ 1Q811 1ZB8A 3CCLZ 3IX0A 1RNIA 1Q862 4NBGA 3CC7Z 2LFUA 3GCFA 4NBDA 3VMGA 3BG1B 1W2BZ 1K732 1ZB9A 2B63I 5LL6f 2H85A 1VQLZ 1YIJ1 2E2JI 2OOXB 1K83I 1WCMI 1YI21 1KD12 1VQ91 2G2KA 2QLVB 3EERA 5IT9b 4HGYA 5CM2M 2QRDB 3NDJA 3G4S1 1AA6A 4QTUA 3CCEZ 1VLAA 1NUIA 1VQ6Z 3GTPI 4NB8A 1K8A2 1PFTA 2R6MA 4DGLA 3CCUZ 3ESWA 2OOYB 3PO3S 3TE5B 2JUBA 4A3FI 2QRCB 2JMOA 1ML8A 1QXFA 2VPXA 4RVHA 1YJN1 1Q812 4X6AI 4S1TA 2IZ4A 3JAMb 4DQYB 1QVGY 1QF8A 5D1OA 3F3FC 1VQK1 1VQ71 2RIQA 4CL1A 1TFIA 2PM9A 3CC21 3CMA1
chains in the Genus database with same CATH topology

2RHBA 4NBEA 3GTMI 3NH5A 3CCQ1 4E33A 1Z01A 2QEX1 1YI2Z 3M3YI 3S2DI 2JA8I 3I56Z 1S721 1VQ9Z 2KI7B 1RLYA 4Y7NI 3VMHA 1KC81 1TWCI 3IFUA 3CCR1 4MD9A 3HOWI 4MD7A 1Y1VI 3CCM1 3F3PC 3EEDA 1RO2A 1VQ51 1YJWZ 2ZAEB 3NDIA 3G6E1 3CC41 1Z02A 3S14I 3KIHA 1KQSZ 3GKQA 3RZDI 3BG0B 1QVFY 4A3GI 4A3II 3T4NB 1NJI1 2P28A 1VQM1 3QWUA 3J81f 4E30A 3D6WA 3CCV1 2YADA 4NBBA 3GTOI 1DL6A 4A3MI 3U50C 1N2FA 2R93I 2WAQA 4BY1I 1VQKZ 2EGTA 1VQ7Z 3HKZA 3TDHB 2RBLA 4AYBA 3CMAZ 2QA4Z 3Q87A 3OW2Y 2QR1B 2QEXZ 1RO4A 1QVGZ 1JJ2Y 4NBAA 5T67A 3JAMf 2V8JA 1WW9A 3J81b 1YUKA 3CPWY 2V8IA 3CCSZ 2F4MA 3CQZI 3CCRZ 2J6AA 5FLMI 1KC82 3I551 1TWFI 3CCJ1 1X3ZA 3CCMZ 3GTJI 1VQ5Z 3G6EZ 3CC4Z 3GTGI 1I50I 2F4OA 3I4NI 1VQOZ 3CD61 1TWAI 1YJ91 1X3WA 2VUMI 1VQMZ 2DE6A 1YHQ1 4MXUA 3CME1 4RVGA 3HOXI 2Q4ZA 2K3RA 1QVFZ 1Q821 5C4XI 1K9M1 1YIT1 4MD8A 4NH1C 3P5JB 1Q861 3PO2I 4NB9A 3S1QI 2R92I 1YIJZ 4QTTA 4A3DI 1TWHI 3MZKB 3CXCY 1S7MA 1USPB 2M6NA 3IF8A 3MZLB 2OTJ1 3FQQA 2DE5A 2GTIA 3MONA 2R7ZI 5A2Qf 2O4HA 5D1PA 3S1MI 1N8R1 4Y52I 4E31A 2QKDA 3G4SZ 5T64A 2AKLA 1VQ81 2RT9A 5FLXf 3OW2Z 2JA6I 2IZ3A 3I55Z 2I3CA 2PMZA 3K7AI 2HU9A 3GTLI 1X0TA 4E2ZA 2PK7A 3FKII 3NH4A 3CCE1 3CPWZ 1WIIA 2VF1A 3LUSA 1YJ9Z 4A3BI 2GU2A 3GTMS 1SFOI 3H0GI 1Q7Y1 4NFRA 4EWCA 5T6BA 1YJNZ 2YU9I 5A2Qb 1VQ41 4RVDA 3VB9A 3GTKI 1Q822 5C3EI 3CC2Z 1K9M2 4BXXI 5FLXb 2NVYI 4A3JI 2RPRA 5C44I 3G711 3CCQZ 2O53A 1Y1VS 3FQMA 2E9HA 3PO3I 1VQP1 3S1NI 1M1K1 4E2WA 2OTJZ 1S72Z 4TNUA 2JNYA 3NFZA 3RZOI 4DK1A 1VQ8Z 1N8R2 4HGZA 5IP9I 2JR6A 3I561 3CXCZ 5C4JI 1YUAA 4NBFA 4E2XA 2K5RA 4A3KI 4MONA 1KQSY 2WB1A 2OTL1 2JA7I 2KPIA 2Q51A 3S2HI 1NJI2 3H3VJ 3KIFA 3S1RI 3CCVZ 1YJW1 1M901 1VQN1 4A3EI 1R9TI 1QYPA 1I6HI 1USPA 2OZKA 3S16I 1TWGI 1Q7Y2 2GTHA 2Y0SA 1W2BY 1VQ4Z 2NVXI 1RQFA 3HOYI 3CCL1 4NOZA 1NP6A 3D9XA 1Z03A 3J80f 4BY7I 2E2HI 3CC71 2QREB 1L1OC 1K731 4RS4A 2DE7A 2JA5I 1KRLA 3G71Z 4XX2A 3NH8A 4E2YA 1VQPZ 3I4MI 2W03A 1VQL1 1KD11 2VUGA 3GTQI 1M1K2 2NVTI 2QA41 5AN9F 4A93I 1Y1WI 5IP7I 3M4OI 2LIYA 4MH4A 3VTNA 4A3LI 2M48A 4NBCA 1JJ2Z 4MRIA 2P3YA 3CCJZ 4E32A 5D1OB 3HOUI 3S15I 2W04A 2JS4A 1P9NA 1ZH1A 2E2II 3HOVI 1JWHC 4A3CI 3CCS1 3J80b 1K8A1 1VQ61 3J7A4 3CD6Z 2OTLZ 2BJOA 4NBHA 2V8KA 1YHQZ 2HF1A 3CCU1 3VMIA 3CMEZ 3S17I 4BBRI 1RO0A 2NVQI 3I07A 4RV9A 1I3QI 4BBSI 1VQNZ 5IT9f 1VQO1 4HH4A 3HOZI 1M902 1LQLA 4RVFA 1YITZ 1Q811 1ZB8A 3CCLZ 3IX0A 1RNIA 1Q862 4NBGA 3CC7Z 2LFUA 3GCFA 4NBDA 3VMGA 3BG1B 1W2BZ 1K732 1ZB9A 2B63I 5LL6f 2H85A 1VQLZ 1YIJ1 2E2JI 2OOXB 1K83I 1WCMI 1YI21 1KD12 1VQ91 2G2KA 2QLVB 3EERA 5IT9b 4HGYA 5CM2M 2QRDB 3NDJA 3G4S1 4QTUA 3CCEZ 1VLAA 1NUIA 1VQ6Z 3GTPI 4NB8A 1K8A2 1PFTA 2R6MA 4DGLA 3CCUZ 3ESWA 2OOYB 3PO3S 3TE5B 2JUBA 4A3FI 2QRCB 2JMOA 1ML8A 4RVHA 1YJN1 1Q812 4X6AI 4S1TA 2IZ4A 3JAMb 4DQYB 1QVGY 1QF8A 5D1OA 3F3FC 1VQK1 1VQ71 2RIQA 4CL1A 1TFIA 2PM9A 3CC21 3CMA1
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 4NBH A;  3PO3 I;  1I50 I;  2F4O A;  2HF1 A;  4NBE A;  3I4N I;  3GTM I;  3S1N I;  3VMI A;  3S17 I;  4BBR I;  1TWA I;  1X3W A;  2VUM I;  2NVQ I;  3I07 A;  1I3Q I;  4BBS I;  2DE6 A;  3M3Y I;  3S2D I;  2JA8 I;  2JNY A;  3HOZ I;  1LQL A;  3RZO I;  1RLY A;  4Y7N I;  3VMH A;  3HOX I;  1ZB8 A;  5IP9 I;  2JR6 A;  5C4J I;  1TWC I;  5C4X I;  1YUA A;  4NBF A;  4NBG A;  3HOW I;  2K5R A;  4A3K I;  3GCF A;  4NBD A;  3VMG A;  4NB9 A;  3PO2 I;  3S1Q I;  1Y1V I;  2R92 I;  1ZB9 A;  4QTT A;  2B63 I;  4A3D I;  2JA7 I;  1TWH I;  2KPI A;  3S14 I;  3S2H I;  3H3V J;  3GKQ A;  3RZD I;  1USP B;  4A3G I;  4A3I I;  2DE5 A;  3S1R I;  2E2J I;  1K83 I;  1WCM I;  2R7Z I;  4A3E I;  1R9T I;  3S1M I;  1QYP A;  1I6H I;  1USP A;  3S16 I;  1TWG I;  3D6W A;  4Y52 I;  4NBB A;  2NVX I;  3GTO I;  1DL6 A;  4A3M I;  3EER A;  2AKL A;  3U50 C;  1N2F A;  3HOY I;  4NOZ A;  5CM2 M;  2R93 I;  4BY7 I;  2JA6 I;  4QTU A;  2E2H I;  4BY1 I;  3K7A I;  1VLA A;  1L1O C;  3GTL I;  1NUI A;  2DE7 A;  2PK7 A;  3FKI I;  2JA5 I;  3GTP I;  4XX2 A;  4NB8 A;  2RBL A;  3LUS A;  3I4M I;  1PFT A;  3Q87 A;  3ESW A;  4A3B I;  3GTQ I;  3PO3 S;  2NVT I;  1RO4 A;  3GTM S;  1SFO I;  3H0G I;  4NBA A;  4A3F I;  4A93 I;  1Y1W I;  5IP7 I;  3M4O I;  2YU9 I;  1WW9 A;  4MH4 A;  4A3L I;  4NBC A;  1ML8 A;  2P3Y A;  2F4M A;  3CQZ I;  3VB9 A;  4X6A I;  3GTK I;  3HOU I;  2J6A A;  5FLM I;  3S15 I;  2JS4 A;  5C3E I;  2E2I I;  3HOV I;  4BXX I;  1TWF I;  4A3C I;  2NVY I;  4A3J I;  1X3Z A;  5C44 I;  3GTJ I;  1TFI A;  2BJO A;  1Y1V S;  3GTG I; 
#chains in the Genus database with same CATH topology
 2RHB A;  4NBE A;  3GTM I;  3NH5 A;  3CCQ 1;  4E33 A;  1Z01 A;  2QEX 1;  1YI2 Z;  3M3Y I;  3S2D I;  2JA8 I;  3I56 Z;  1S72 1;  1VQ9 Z;  2KI7 B;  1RLY A;  4Y7N I;  3VMH A;  1KC8 1;  1TWC I;  2AYD A;  3IFU A;  3CCR 1;  4MD9 A;  3HOW I;  4MD7 A;  1Y1V I;  3CCM 1;  3F3P C;  3EED A;  1RO2 A;  1VQ5 1;  1YJW Z;  2ZAE B;  3NDI A;  3G6E 1;  3CC4 1;  1Z02 A;  3S14 I;  3KIH A;  1KQS Z;  3GKQ A;  3RZD I;  3BG0 B;  1QVF Y;  4A3G I;  4A3I I;  3T4N B;  1NJI 1;  2P28 A;  1VQM 1;  3QWU A;  3J81 f;  2V45 A;  4E30 A;  3D6W A;  3CCV 1;  2YAD A;  4NBB A;  3GTO I;  1DL6 A;  4A3M I;  3U50 C;  1N2F A;  2E7Z A;  2R93 I;  2WAQ A;  4BY1 I;  1VQK Z;  2EGT A;  1VQ7 Z;  3HKZ A;  3TDH B;  2RBL A;  4AYB A;  3CMA Z;  2QA4 Z;  3Q87 A;  3OW2 Y;  2QR1 B;  2QEX Z;  1RO4 A;  1QVG Z;  1JJ2 Y;  4NBA A;  5T67 A;  3JAM f;  1Q16 A;  2V8J A;  1WW9 A;  3J81 b;  1YUK A;  3CPW Y;  2V8I A;  3CCS Z;  2F4M A;  3CQZ I;  3CCR Z;  2J6A A;  5FLM I;  1KC8 2;  3I55 1;  1TWF I;  3CCJ 1;  1X3Z A;  3CCM Z;  3GTJ I;  1VQ5 Z;  3G6E Z;  3CC4 Z;  3GTG I;  1I50 I;  2F4O A;  3I4N I;  1VQO Z;  3CD6 1;  1TWA I;  1YJ9 1;  1X3W A;  2VUM I;  1VQM Z;  2DE6 A;  1YHQ 1;  4MXU A;  3CME 1;  4RVG A;  3HOX I;  2Q4Z A;  2K3R A;  1QVF Z;  1Q82 1;  5C4X I;  1K9M 1;  1YIT 1;  4MD8 A;  4NH1 C;  3P5J B;  1Q86 1;  3PO2 I;  4NB9 A;  3S1Q I;  2JIQ A;  2R92 I;  1YIJ Z;  4QTT A;  4A3D I;  1TWH I;  3MZK B;  3CXC Y;  1S7M A;  1USP B;  2M6N A;  3IF8 A;  3MZL B;  2OTJ 1;  3FQQ A;  2DE5 A;  2GTI A;  2VPZ A;  3MON A;  2R7Z I;  5A2Q f;  2O4H A;  5D1P A;  3S1M I;  1N8R 1;  4Y52 I;  4E31 A;  2QKD A;  3G4S Z;  5T64 A;  2AKL A;  1VQ8 1;  2RT9 A;  5FLX f;  3OW2 Z;  2JA6 I;  2IZ3 A;  3I55 Z;  2I3C A;  2PMZ A;  2JIP A;  2VPY A;  3K7A I;  2HU9 A;  3GTL I;  1X0T A;  1SIW A;  4E2Z A;  2PK7 A;  3FKI I;  3NH4 A;  3CCE 1;  3CPW Z;  1WII A;  2VF1 A;  3LUS A;  1YJ9 Z;  4A3B I;  2GU2 A;  2JIM A;  3GTM S;  1SFO I;  3H0G I;  1Q7Y 1;  4NFR A;  4EWC A;  5T6B A;  1YJN Z;  2YU9 I;  5A2Q b;  1VQ4 1;  4RVD A;  3VB9 A;  3GTK I;  1Q82 2;  5C3E I;  3CC2 Z;  1K9M 2;  4BXX I;  5FLX b;  2NVY I;  1WJ2 A;  4A3J I;  2RPR A;  5C44 I;  3G71 1;  3CCQ Z;  2O53 A;  1Y1V S;  3FQM A;  2E9H A;  3PO3 I;  1VQP 1;  3S1N I;  1M1K 1;  4E2W A;  2OTJ Z;  1S72 Z;  4TNU A;  2JNY A;  3NFZ A;  3RZO I;  2NAP A;  4DK1 A;  1VQ8 Z;  1N8R 2;  4HGZ A;  5IP9 I;  2JR6 A;  3I56 1;  3CXC Z;  2IV2 X;  5C4J I;  1YUA A;  4NBF A;  4E2X A;  2K5R A;  4A3K I;  2VPW A;  4MON A;  1KQS Y;  2WB1 A;  2OTL 1;  3D2L A;  2JA7 I;  2KPI A;  2Q51 A;  3S2H I;  1NJI 2;  3H3V J;  3KIF A;  3S1R I;  3CCV Z;  1YJW 1;  1M90 1;  1VQN 1;  2JIR A;  4A3E I;  1R9T I;  1QYP A;  1I6H I;  1USP A;  2OZK A;  3S16 I;  1TWG I;  1Q7Y 2;  2GTH A;  2Y0S A;  1W2B Y;  1VQ4 Z;  2NVX I;  1RQF A;  3HOY I;  3CCL 1;  4NOZ A;  1NP6 A;  3D9X A;  1Z03 A;  3J80 f;  4BY7 I;  2E2H I;  3CC7 1;  2QRE B;  1L1O C;  1K73 1;  4RS4 A;  2DE7 A;  2JA5 I;  1KRL A;  3G71 Z;  4XX2 A;  3NH8 A;  4E2Y A;  1VQP Z;  3I4M I;  1FDO A;  2W03 A;  1VQL 1;  1KD1 1;  2VUG A;  3IR7 A;  3GTQ I;  1M1K 2;  2NVT I;  2QA4 1;  5AN9 F;  4A93 I;  2JIO A;  1WZN A;  1Y1W I;  5IP7 I;  3M4O I;  2LIY A;  2LEX A;  4MH4 A;  3VTN A;  4A3L I;  2M48 A;  4NBC A;  1JJ2 Z;  4MRI A;  2V3V A;  2P3Y A;  3CCJ Z;  4E32 A;  5D1O B;  3HOU I;  3S15 I;  2W04 A;  2JS4 A;  1P9N A;  1ZH1 A;  2E2I I;  3HOV I;  1JWH C;  4A3C I;  3CCS 1;  3J80 b;  1K8A 1;  1VQ6 1;  3J7A 4;  3CD6 Z;  2OTL Z;  2BJO A;  4NBH A;  2V8K A;  1YHQ Z;  2HF1 A;  3CCU 1;  3VMI A;  3CME Z;  3S17 I;  4BBR I;  1RO0 A;  1Y8C A;  3I07 A;  2NVQ I;  4RV9 A;  1I3Q I;  4BBS I;  1VQN Z;  5IT9 f;  1VQO 1;  4HH4 A;  3HOZ I;  1M90 2;  1LQL A;  1FDI A;  4RVF A;  1YIT Z;  1Q81 1;  1ZB8 A;  3CCL Z;  3IX0 A;  1RNI A;  1Q86 2;  4NBG A;  3CC7 Z;  2LFU A;  3GCF A;  4NBD A;  3VMG A;  3BG1 B;  1W2B Z;  1K73 2;  1ZB9 A;  2B63 I;  5LL6 f;  2H85 A;  1VQL Z;  1YIJ 1;  2E2J I;  2OOX B;  1K83 I;  1WCM I;  1YI2 1;  1KD1 2;  1VQ9 1;  2G2K A;  2QLV B;  3EER A;  5IT9 b;  4HGY A;  5CM2 M;  2QRD B;  3NDJ A;  3G4S 1;  1AA6 A;  4QTU A;  3CCE Z;  1VLA A;  1NUI A;  1VQ6 Z;  3GTP I;  4NB8 A;  1K8A 2;  1PFT A;  2R6M A;  4DGL A;  3CCU Z;  3ESW A;  2OOY B;  3PO3 S;  3TE5 B;  2JUB A;  4A3F I;  2QRC B;  2JMO A;  1ML8 A;  1QXF A;  2VPX A;  4RVH A;  1YJN 1;  1Q81 2;  4X6A I;  4S1T A;  2IZ4 A;  3JAM b;  4DQY B;  1QVG Y;  1QF8 A;  5D1O A;  3F3F C;  1VQK 1;  1VQ7 1;  2RIQ A;  4CL1 A;  1TFI A;  2PM9 A;  3CC2 1;  3CMA 1; 
#chains in the Genus database with same CATH homology
 2RHB A;  4NBE A;  3GTM I;  3NH5 A;  3CCQ 1;  4E33 A;  1Z01 A;  2QEX 1;  1YI2 Z;  3M3Y I;  3S2D I;  2JA8 I;  3I56 Z;  1S72 1;  1VQ9 Z;  2KI7 B;  1RLY A;  4Y7N I;  3VMH A;  1KC8 1;  1TWC I;  3IFU A;  3CCR 1;  4MD9 A;  3HOW I;  4MD7 A;  1Y1V I;  3CCM 1;  3F3P C;  3EED A;  1RO2 A;  1VQ5 1;  1YJW Z;  2ZAE B;  3NDI A;  3G6E 1;  3CC4 1;  1Z02 A;  3S14 I;  3KIH A;  1KQS Z;  3GKQ A;  3RZD I;  3BG0 B;  1QVF Y;  4A3G I;  4A3I I;  3T4N B;  1NJI 1;  2P28 A;  1VQM 1;  3QWU A;  3J81 f;  4E30 A;  3D6W A;  3CCV 1;  2YAD A;  4NBB A;  3GTO I;  1DL6 A;  4A3M I;  3U50 C;  1N2F A;  2R93 I;  2WAQ A;  4BY1 I;  1VQK Z;  2EGT A;  1VQ7 Z;  3HKZ A;  3TDH B;  2RBL A;  4AYB A;  3CMA Z;  2QA4 Z;  3Q87 A;  3OW2 Y;  2QR1 B;  2QEX Z;  1RO4 A;  1QVG Z;  1JJ2 Y;  4NBA A;  5T67 A;  3JAM f;  2V8J A;  1WW9 A;  3J81 b;  1YUK A;  3CPW Y;  2V8I A;  3CCS Z;  2F4M A;  3CQZ I;  3CCR Z;  2J6A A;  5FLM I;  1KC8 2;  3I55 1;  1TWF I;  3CCJ 1;  1X3Z A;  3CCM Z;  3GTJ I;  1VQ5 Z;  3G6E Z;  3CC4 Z;  3GTG I;  1I50 I;  2F4O A;  3I4N I;  1VQO Z;  3CD6 1;  1TWA I;  1YJ9 1;  1X3W A;  2VUM I;  1VQM Z;  2DE6 A;  1YHQ 1;  4MXU A;  3CME 1;  4RVG A;  3HOX I;  2Q4Z A;  2K3R A;  1QVF Z;  1Q82 1;  5C4X I;  1K9M 1;  1YIT 1;  4MD8 A;  4NH1 C;  3P5J B;  1Q86 1;  3PO2 I;  4NB9 A;  3S1Q I;  2R92 I;  1YIJ Z;  4QTT A;  4A3D I;  1TWH I;  3MZK B;  3CXC Y;  1S7M A;  1USP B;  2M6N A;  3IF8 A;  3MZL B;  2OTJ 1;  3FQQ A;  2DE5 A;  2GTI A;  3MON A;  2R7Z I;  5A2Q f;  2O4H A;  5D1P A;  3S1M I;  1N8R 1;  4Y52 I;  4E31 A;  2QKD A;  3G4S Z;  5T64 A;  2AKL A;  1VQ8 1;  2RT9 A;  5FLX f;  3OW2 Z;  2JA6 I;  2IZ3 A;  3I55 Z;  2I3C A;  2PMZ A;  3K7A I;  2HU9 A;  3GTL I;  1X0T A;  4E2Z A;  2PK7 A;  3FKI I;  3NH4 A;  3CCE 1;  3CPW Z;  1WII A;  2VF1 A;  3LUS A;  1YJ9 Z;  4A3B I;  2GU2 A;  3GTM S;  1SFO I;  3H0G I;  1Q7Y 1;  4NFR A;  4EWC A;  5T6B A;  1YJN Z;  2YU9 I;  5A2Q b;  1VQ4 1;  4RVD A;  3VB9 A;  3GTK I;  1Q82 2;  5C3E I;  3CC2 Z;  1K9M 2;  4BXX I;  5FLX b;  2NVY I;  4A3J I;  2RPR A;  5C44 I;  3G71 1;  3CCQ Z;  2O53 A;  1Y1V S;  3FQM A;  2E9H A;  3PO3 I;  1VQP 1;  3S1N I;  1M1K 1;  4E2W A;  2OTJ Z;  1S72 Z;  4TNU A;  2JNY A;  3NFZ A;  3RZO I;  4DK1 A;  1VQ8 Z;  1N8R 2;  4HGZ A;  5IP9 I;  2JR6 A;  3I56 1;  3CXC Z;  5C4J I;  1YUA A;  4NBF A;  4E2X A;  2K5R A;  4A3K I;  4MON A;  1KQS Y;  2WB1 A;  2OTL 1;  2JA7 I;  2KPI A;  2Q51 A;  3S2H I;  1NJI 2;  3H3V J;  3KIF A;  3S1R I;  3CCV Z;  1YJW 1;  1M90 1;  1VQN 1;  4A3E I;  1R9T I;  1QYP A;  1I6H I;  1USP A;  2OZK A;  3S16 I;  1TWG I;  1Q7Y 2;  2GTH A;  2Y0S A;  1W2B Y;  1VQ4 Z;  2NVX I;  1RQF A;  3HOY I;  3CCL 1;  4NOZ A;  1NP6 A;  3D9X A;  1Z03 A;  3J80 f;  4BY7 I;  2E2H I;  3CC7 1;  2QRE B;  1L1O C;  1K73 1;  4RS4 A;  2DE7 A;  2JA5 I;  1KRL A;  3G71 Z;  4XX2 A;  3NH8 A;  4E2Y A;  1VQP Z;  3I4M I;  2W03 A;  1VQL 1;  1KD1 1;  2VUG A;  3GTQ I;  1M1K 2;  2NVT I;  2QA4 1;  5AN9 F;  4A93 I;  1Y1W I;  5IP7 I;  3M4O I;  2LIY A;  4MH4 A;  3VTN A;  4A3L I;  2M48 A;  4NBC A;  1JJ2 Z;  4MRI A;  2P3Y A;  3CCJ Z;  4E32 A;  5D1O B;  3HOU I;  3S15 I;  2W04 A;  2JS4 A;  1P9N A;  1ZH1 A;  2E2I I;  3HOV I;  1JWH C;  4A3C I;  3CCS 1;  3J80 b;  1K8A 1;  1VQ6 1;  3J7A 4;  3CD6 Z;  2OTL Z;  2BJO A;  4NBH A;  2V8K A;  1YHQ Z;  2HF1 A;  3CCU 1;  3VMI A;  3CME Z;  3S17 I;  4BBR I;  1RO0 A;  2NVQ I;  3I07 A;  4RV9 A;  1I3Q I;  4BBS I;  1VQN Z;  5IT9 f;  1VQO 1;  4HH4 A;  3HOZ I;  1M90 2;  1LQL A;  4RVF A;  1YIT Z;  1Q81 1;  1ZB8 A;  3CCL Z;  3IX0 A;  1RNI A;  1Q86 2;  4NBG A;  3CC7 Z;  2LFU A;  3GCF A;  4NBD A;  3VMG A;  3BG1 B;  1W2B Z;  1K73 2;  1ZB9 A;  2B63 I;  5LL6 f;  2H85 A;  1VQL Z;  1YIJ 1;  2E2J I;  2OOX B;  1K83 I;  1WCM I;  1YI2 1;  1KD1 2;  1VQ9 1;  2G2K A;  2QLV B;  3EER A;  5IT9 b;  4HGY A;  5CM2 M;  2QRD B;  3NDJ A;  3G4S 1;  4QTU A;  3CCE Z;  1VLA A;  1NUI A;  1VQ6 Z;  3GTP I;  4NB8 A;  1K8A 2;  1PFT A;  2R6M A;  4DGL A;  3CCU Z;  3ESW A;  2OOY B;  3PO3 S;  3TE5 B;  2JUB A;  4A3F I;  2QRC B;  2JMO A;  1ML8 A;  4RVH A;  1YJN 1;  1Q81 2;  4X6A I;  4S1T A;  2IZ4 A;  3JAM b;  4DQY B;  1QVG Y;  1QF8 A;  5D1O A;  3F3F C;  1VQK 1;  1VQ7 1;  2RIQ A;  4CL1 A;  1TFI A;  2PM9 A;  3CC2 1;  3CMA 1;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

3HOYI

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations