3S1NI

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV1 (7-10)TIV2 (8-11)S1 (14-18)TI1 (20-23)S2 (25-29)S3 (35-37)TVIII1 (38-41)TII1 (51-54)TVIII2 (47-50)TVIII3 (53-56)TI2 (59-62)TIV5 (55-58)TIV9 (103-106)3H1 (62-64)TI3 (65-68)S4 (83-87)TIV7 (76-79)S5 (99-103)O1 (90-92)S6 (109-111)TIV10 (104-107)TIV3 (19-22)TIV6 (75-78)TIV8 (92-95)TIV11 (113-116)Updating...
connected with : NaN
molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 15
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s1nI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s1nI02
4NBCA 4A3LI 4NB8A 1TFIA 4NBHA 3VMGA 1USPA 2J6AA 3S1NI 1WW9A 4BY7I 3S15I 4A3JI 2P3YA 3FKII 1TWAI 3HOYI 3HOZI 5IP7I 4NBEA 4BY1I 1Y1VS 4BBSI 1I6HI 3GTMI 2B63I 3U50C 3PO3S 1VLAA 3GTQI 3H3VJ 3S14I 4A3DI 4A3GI 4A3FI 2DE7A 4NBBA 3GTGI 4X6AI 3D6WA 4A3BI 3GTKI 3M4OI 2R93I 1ML8A 3I4MI 1RO4A 3H0GI 1YUAA 3HOUI 1NUIA 1QYPA 3S16I 2JNYA 3GTJI 4A93I 2KPIA 3HOVI 1WCMI 3GTMS 3S1MI 2R92I 4BBRI 2R7ZI 1PFTA 1USPB 5CM2M 2PK7A 1TWHI 3GKQA 2NVTI 1TWFI 3S2DI 4NBDA 4NBAA 2F4MA 2AKLA 4A3II 3S1RI 5IP9I 3VMHA 1ZB8A 3RZDI 3K7AI 2E2JI 2RBLA 3EERA 2NVQI 3CQZI 2E2HI 4QTUA 2JA8I 3I4NI 1Y1VI 4A3KI 4MH4A 2F4OA 3RZOI 4NBGA 2NVYI 2DE5A 3I07A 3VMIA 3PO3I 3HOXI 2K5RA 4XX2A 3VB9A 3GTPI 2DE6A 4NOZA 1X3WA 2YU9I 3GTOI 2JS4A 3LUSA 1R9TI 1DL6A 1RLYA 1Y1WI 2HF1A 5C3EI 2JA5I 2NVXI 2JA7I 3S17I 2JR6A 3ESWA 4Y52I 4Y7NI 1L1OC 5FLMI 4A3EI 3HOWI 4BXXI 1I3QI 3GCFA 4QTTA 2JA6I 2VUMI 5C4XI 3Q87A 1I50I 1X3ZA 4A3MI 3S2HI 3PO2I 4NB9A 1TWCI 1K83I 1N2FA 1TWGI 4NBFA 5C4JI 2E2II 3GTLI 2BJOA 3M3YI 4A3CI 1SFOI 3S1QI 5C44I 1ZB9A 1LQLA
chains in the Genus database with same CATH superfamily
3CCSZ 4NBCA 3CCM1 2Y0SA 2KI7B 4NB8A 1YJNZ 1VQ7Z 3CD6Z 3J81f 1KQSY 2LFUA 1WW9A 3D9XA 1VQ91 1N8R1 3CC41 1YIJZ 1TWAI 5LL6f 4E30A 2H85A 1M1K1 3PO3S 2VPXA 3GTQI 3S14I 3KIHA 1YHQ1 4NBBA 1RQFA 1WJ2A 4RVGA 3P5JB 3M4OI 2OZKA 3I4MI 1RO4A 3QWUA 1X0TA 2ZAEB 3CC7Z 1K9M2 3GTJI 1AA6A 1M901 3CMEZ 1YJW1 2LIYA 3G4S1 1WCMI 1VQLZ 2R92I 1PFTA 1VQ4Z 2PK7A 1VQMZ 2E7ZA 2AKLA 4A3II 3J80f 2W03A 5IP9I 3CMA1 3VMHA 3J81b 1JJ2Z 2PMZA 3K7AI 3CCVZ 3CCEZ 2JA8I 1VQP1 3CCLZ 3I07A 3VMIA 5IT9f 2VPWA 3PO3I 3CCR1 2Q4ZA 2DE6A 3KIFA 1W2BZ 3F3PC 2OTLZ 2VPYA 1VQO1 1R9TI 1Q7Y1 1VQN1 2QEX1 1DL6A 1Q811 1VQ81 1KRLA 1YJN1 1VQ71 2JA5I 2NVXI 1Q862 3G6E1 2IV2X 3GCFA 2VUGA 3NH8A 5T6BA 3NH5A 3Q87A 3S2HI 1N2FA 2NAPA 2BJOA 3BG0B 3MONA 5FLXf 1YJ91 3CCQZ 1S72Z 4A3LI 2WAQA 3J80b 1Z02A 3IX0A 2J6AA 1YIT1 3S15I 2GTHA 1Z03A 2P3YA 4NBEA 4BY1I 1Q16A 5IT9b 1NJI1 1I6HI 5T64A 2B63I 2P28A 4MONA 3J7A4 3MZLB 4A3GI 3TDHB 3D6WA 4A3BI 3CPWZ 4AYBA 2OOYB 4DQYB 2JIPA 5D1OB 1K8A1 3OW2Y 1YUAA 1YI2Z 3CCE1 3I56Z 1QVGZ 3EEDA 4A93I 1VQK1 2KPIA 2G2KA 3CCL1 2RPRA 3GTMS 5FLXb 4BBRI 1USPB 5CM2M 2OTL1 2QKDA 1TWFI 4MD9A 3S2DI 4NBAA 3S1RI 4EWCA 4DGLA 2QREB 3CC21 4MD8A 2E2JI 1Q822 4QTUA 3CCJ1 4A3KI 3RZOI 3CXCZ 1RO2A 4E2YA 4XX2A 4HGYA 1X3WA 1VQ51 2VPZA 3LUSA 3JAMf 1SIWA 2QA4Z 2Q51A 1Q821 1KC82 3BG1B 2HF1A 1K9M1 4E2WA 1Y8CA 5FLMI 4A3EI 1I3QI 4QTTA 3FQQA 5C4XI 2W04A 1X3ZA 1WIIA 1TWCI 1TWGI 4NBFA 1Z01A 2QRCB 3CXCY 1VQ6Z 3G71Z 3M3YI 3I55Z 2AYDA 3S1QI 5C44I 3CCMZ 1LQLA 3TE5B 2V8IA 3FQMA 3CCS1 2QRDB 1K732 3CD61 3S1NI 3CC4Z 1JJ2Y 1QVFZ 4BY7I 2V8KA 1YI21 3FKII 3HOYI 3HOZI 4NH1C 1YIJ1 4BBSI 1WZNA 2E9HA 3U50C 2V8JA 1VLAA 3H3VJ 4DK1A 1YHQZ 3T4NB 2O53A 3JAMb 4RVFA 4E32A 1W2BY 3GTGI 1Q861 2K3RA 1ML8A 3H0GI 1RNIA 3HOUI 2JIRA 1S7MA 1NUIA 1QYPA 1YJWZ 3S16I 2JNYA 3CC71 1QVFY 3G4SZ 4E31A 3HOVI 3CME1 2R7ZI 1VQL1 3GKQA 2NVTI 1VQ41 3CMAZ 1KQSZ 1VQM1 1FDIA 2QLVB 4E2XA 2JMOA 3EERA 5A2Qf 3CCV1 1VQPZ 1ZH1A 1FDOA 2F4OA 2NVYI 4NBGA 1N8R2 3MZKB 5T67A 2GTIA 2HU9A 2O4HA 4RVDA 1VQ61 2OTJZ 4NOZA 5AN9F 2M6NA 1VQOZ 2YU9I 1VQNZ 2QEXZ 3GTOI 2JS4A 1VQ8Z 1M1K2 3IF8A 4E2ZA 1Y1WI 2EGTA 3IR7A 2R6MA 3G6EZ 2JA7I 1RO0A 4RVHA 2M48A 3ESWA 3CPWY 4Y52I 4Y7NI 1L1OC 1KD12 3HOWI 4BXXI 4MXUA 1QXFA 2VUMI 4HH4A 1I50I 1QF8A 5C4JI 1K83I 2E2II 5D1OA 1QVGY 4NFRA 4RV9A 1YJ9Z 3F3FC 1M902 3NDIA 4MRIA 2QR1B 2RHBA 3CCUZ 2JIOA 3CCQ1 1S721 2JIQA 1KD11 1P9NA 1TFIA 4NBHA 1YITZ 3VMGA 1USPA 5A2Qb 1NP6A 4CL1A 4A3JI 2IZ4A 2V45A 5IP7I 1Y1VS 3GTMI 3VTNA 2RT9A 4E33A 2VF1A 4A3DI 3NH4A 1KC81 4A3FI 2DE7A 4X6AI 3NFZA 1Q7Y2 3GTKI 3IFUA 2R93I 1Q812 1VQ9Z 1VQKZ 4MD7A 3I561 3S1MI 2JUBA 2OTJ1 3D2LA 1TWHI 2GU2A 1K731 2PM9A 4NBDA 2F4MA 3CC2Z 1ZB8A 4TNUA 3RZDI 3CCJZ 2RBLA 2NVQI 3CQZI 2E2HI 4RS4A 3I4NI 1Y1VI 4MH4A 4HGZA 2DE5A 3HOXI 2K5RA 3HKZA 3NDJA 1VQ5Z 3VB9A 3GTPI 2RIQA 2OOXB 1NJI2 2JIMA 3CCU1 1RLYA 1YUKA 2YADA 3OW2Z 5C3EI 2QA41 3S17I 4S1TA 2JR6A 1JWHC 2IZ3A 2I3CA 2WB1A 2JA6I 2LEXA 1K8A2 4A3MI 3PO2I 4NB9A 3CCRZ 5D1PA 3GTLI 2V3VA 4A3CI 3G711 1SFOI 1ZB9A 3I551
chains in the Genus database with same CATH topology
3CCSZ 4NBCA 3CCM1 2Y0SA 2KI7B 4NB8A 1YJNZ 1VQ7Z 3CD6Z 3J81f 1KQSY 2LFUA 1WW9A 3D9XA 1VQ91 1N8R1 3CC41 1YIJZ 1TWAI 5LL6f 4E30A 2H85A 1M1K1 3PO3S 3GTQI 3S14I 3KIHA 1YHQ1 4NBBA 1RQFA 4RVGA 3P5JB 3M4OI 2OZKA 3I4MI 1RO4A 3QWUA 1X0TA 2ZAEB 3CC7Z 1K9M2 3GTJI 1M901 3CMEZ 1YJW1 2LIYA 3G4S1 1WCMI 1VQLZ 2R92I 1PFTA 1VQ4Z 2PK7A 1VQMZ 2AKLA 4A3II 3J80f 2W03A 5IP9I 3CMA1 3VMHA 3J81b 1JJ2Z 2PMZA 3K7AI 3CCVZ 3CCEZ 2JA8I 1VQP1 3CCLZ 3I07A 3VMIA 5IT9f 3PO3I 3CCR1 2Q4ZA 2DE6A 3KIFA 1W2BZ 3F3PC 2OTLZ 1VQO1 1R9TI 1Q7Y1 1VQN1 2QEX1 1DL6A 1Q811 1VQ81 1KRLA 1YJN1 1VQ71 2JA5I 2NVXI 1Q862 3G6E1 3GCFA 2VUGA 3NH8A 5T6BA 3NH5A 3Q87A 3S2HI 1N2FA 2BJOA 3BG0B 3MONA 5FLXf 1YJ91 3CCQZ 1S72Z 4A3LI 2WAQA 3J80b 1Z02A 3IX0A 2J6AA 1YIT1 3S15I 2GTHA 1Z03A 2P3YA 4NBEA 4BY1I 5IT9b 1NJI1 1I6HI 5T64A 2B63I 2P28A 4MONA 3J7A4 3MZLB 4A3GI 3TDHB 3D6WA 4A3BI 3CPWZ 4AYBA 2OOYB 4DQYB 5D1OB 1K8A1 3OW2Y 1YUAA 1YI2Z 3CCE1 3I56Z 1QVGZ 3EEDA 4A93I 1VQK1 2KPIA 2G2KA 3CCL1 2RPRA 3GTMS 5FLXb 4BBRI 1USPB 5CM2M 2OTL1 2QKDA 1TWFI 4MD9A 3S2DI 4NBAA 3S1RI 4EWCA 4DGLA 2QREB 3CC21 4MD8A 2E2JI 1Q822 4QTUA 3CCJ1 4A3KI 3RZOI 3CXCZ 1RO2A 4E2YA 4XX2A 4HGYA 1X3WA 1VQ51 3LUSA 3JAMf 2QA4Z 2Q51A 1Q821 1KC82 3BG1B 2HF1A 1K9M1 4E2WA 5FLMI 4A3EI 1I3QI 4QTTA 3FQQA 5C4XI 2W04A 1X3ZA 1WIIA 1TWCI 1TWGI 4NBFA 1Z01A 2QRCB 3CXCY 1VQ6Z 3G71Z 3M3YI 3I55Z 3S1QI 5C44I 3CCMZ 1LQLA 3TE5B 2V8IA 3FQMA 3CCS1 2QRDB 1K732 3CD61 3S1NI 3CC4Z 1JJ2Y 1QVFZ 4BY7I 2V8KA 1YI21 3FKII 3HOYI 3HOZI 4NH1C 1YIJ1 4BBSI 2E9HA 3U50C 2V8JA 1VLAA 3H3VJ 4DK1A 1YHQZ 3T4NB 2O53A 3JAMb 4RVFA 4E32A 1W2BY 3GTGI 1Q861 2K3RA 1ML8A 3H0GI 1RNIA 3HOUI 1S7MA 1NUIA 1QYPA 1YJWZ 3S16I 2JNYA 3CC71 1QVFY 3G4SZ 4E31A 3HOVI 3CME1 2R7ZI 1VQL1 3GKQA 2NVTI 1VQ41 3CMAZ 1KQSZ 1VQM1 2QLVB 4E2XA 2JMOA 3EERA 5A2Qf 3CCV1 1VQPZ 1ZH1A 2F4OA 2NVYI 4NBGA 1N8R2 3MZKB 5T67A 2GTIA 2HU9A 2O4HA 4RVDA 1VQ61 2OTJZ 4NOZA 5AN9F 2M6NA 1VQOZ 2YU9I 1VQNZ 2QEXZ 3GTOI 2JS4A 1VQ8Z 1M1K2 3IF8A 4E2ZA 1Y1WI 2EGTA 2R6MA 3G6EZ 2JA7I 1RO0A 4RVHA 2M48A 3ESWA 3CPWY 4Y52I 4Y7NI 1L1OC 1KD12 3HOWI 4BXXI 4MXUA 2VUMI 4HH4A 1I50I 1QF8A 1K83I 5C4JI 2E2II 5D1OA 1QVGY 4NFRA 4RV9A 1YJ9Z 3F3FC 1M902 3NDIA 4MRIA 2QR1B 2RHBA 3CCUZ 3CCQ1 1S721 1KD11 1P9NA 1TFIA 4NBHA 1YITZ 3VMGA 1USPA 5A2Qb 1NP6A 4CL1A 4A3JI 2IZ4A 5IP7I 1Y1VS 3GTMI 3VTNA 2RT9A 4E33A 2VF1A 4A3DI 3NH4A 1KC81 4A3FI 2DE7A 4X6AI 3NFZA 1Q7Y2 3GTKI 3IFUA 2R93I 1Q812 1VQ9Z 1VQKZ 4MD7A 3I561 3S1MI 2JUBA 2OTJ1 1TWHI 2GU2A 1K731 2PM9A 4NBDA 2F4MA 3CC2Z 1ZB8A 4TNUA 3RZDI 3CCJZ 2RBLA 2NVQI 3CQZI 2E2HI 4RS4A 3I4NI 1Y1VI 4MH4A 4HGZA 2DE5A 3HOXI 2K5RA 3HKZA 3NDJA 1VQ5Z 3VB9A 3GTPI 2RIQA 2OOXB 1NJI2 3CCU1 1RLYA 1YUKA 2YADA 3OW2Z 5C3EI 2QA41 3S17I 4S1TA 2JR6A 1JWHC 2IZ3A 2I3CA 2WB1A 2JA6I 1K8A2 4A3MI 3PO2I 4NB9A 3CCRZ 5D1PA 3GTLI 4A3CI 3G711 1SFOI 1ZB9A 3I551
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NBC A;  4A3L I;  4NB8 A;  1TFI A;  4NBH A;  3VMG A;  1USP A;  2J6A A;  3S1N I;  1WW9 A;  4BY7 I;  3S15 I;  4A3J I;  2P3Y A;  3FKI I;  1TWA I;  3HOY I;  3HOZ I;  5IP7 I;  4NBE A;  4BY1 I;  1Y1V S;  4BBS I;  1I6H I;  3GTM I;  2B63 I;  3U50 C;  3PO3 S;  1VLA A;  3GTQ I;  3H3V J;  3S14 I;  4A3D I;  4A3G I;  4A3F I;  2DE7 A;  4NBB A;  3GTG I;  4X6A I;  3D6W A;  4A3B I;  3GTK I;  3M4O I;  2R93 I;  1ML8 A;  3I4M I;  1RO4 A;  3H0G I;  1YUA A;  3HOU I;  1NUI A;  1QYP A;  3S16 I;  2JNY A;  3GTJ I;  4A93 I;  2KPI A;  3HOV I;  1WCM I;  3GTM S;  3S1M I;  2R92 I;  4BBR I;  2R7Z I;  1PFT A;  1USP B;  5CM2 M;  2PK7 A;  1TWH I;  3GKQ A;  2NVT I;  1TWF I;  3S2D I;  4NBD A;  4NBA A;  2F4M A;  2AKL A;  4A3I I;  3S1R I;  5IP9 I;  3VMH A;  1ZB8 A;  3RZD I;  3K7A I;  2E2J I;  2RBL A;  3EER A;  2NVQ I;  3CQZ I;  2E2H I;  4QTU A;  2JA8 I;  3I4N I;  1Y1V I;  4A3K I;  4MH4 A;  2F4O A;  3RZO I;  4NBG A;  2NVY I;  2DE5 A;  3I07 A;  3VMI A;  3PO3 I;  3HOX I;  2K5R A;  4XX2 A;  3VB9 A;  3GTP I;  2DE6 A;  4NOZ A;  1X3W A;  2YU9 I;  3GTO I;  2JS4 A;  3LUS A;  1R9T I;  1DL6 A;  1RLY A;  1Y1W I;  2HF1 A;  5C3E I;  2JA5 I;  2NVX I;  2JA7 I;  3S17 I;  2JR6 A;  3ESW A;  4Y52 I;  4Y7N I;  1L1O C;  5FLM I;  4A3E I;  3HOW I;  4BXX I;  1I3Q I;  3GCF A;  4QTT A;  2JA6 I;  2VUM I;  5C4X I;  3Q87 A;  1I50 I;  1X3Z A;  4A3M I;  3S2H I;  3PO2 I;  4NB9 A;  1TWC I;  1K83 I;  1N2F A;  1TWG I;  4NBF A;  5C4J I;  2E2I I;  3GTL I;  2BJO A;  3M3Y I;  4A3C I;  1SFO I;  3S1Q I;  5C44 I;  1ZB9 A;  1LQL A; 
#chains in the Genus database with same CATH topology
 3CCS Z;  4NBC A;  3CCM 1;  2Y0S A;  2KI7 B;  4NB8 A;  1YJN Z;  1VQ7 Z;  3CD6 Z;  3J81 f;  1KQS Y;  2LFU A;  1WW9 A;  3D9X A;  1VQ9 1;  1N8R 1;  3CC4 1;  1YIJ Z;  1TWA I;  5LL6 f;  4E30 A;  2H85 A;  1M1K 1;  3PO3 S;  2VPX A;  3GTQ I;  3S14 I;  3KIH A;  1YHQ 1;  4NBB A;  1RQF A;  1WJ2 A;  4RVG A;  3P5J B;  3M4O I;  2OZK A;  3I4M I;  1RO4 A;  3QWU A;  1X0T A;  2ZAE B;  3CC7 Z;  1K9M 2;  3GTJ I;  1AA6 A;  1M90 1;  3CME Z;  1YJW 1;  2LIY A;  3G4S 1;  1WCM I;  1VQL Z;  2R92 I;  1PFT A;  1VQ4 Z;  2PK7 A;  1VQM Z;  2E7Z A;  2AKL A;  4A3I I;  3J80 f;  2W03 A;  5IP9 I;  3CMA 1;  3VMH A;  3J81 b;  1JJ2 Z;  2PMZ A;  3K7A I;  3CCV Z;  3CCE Z;  2JA8 I;  1VQP 1;  3CCL Z;  3I07 A;  3VMI A;  5IT9 f;  2VPW A;  3PO3 I;  3CCR 1;  2Q4Z A;  2DE6 A;  3KIF A;  1W2B Z;  3F3P C;  2OTL Z;  2VPY A;  1VQO 1;  1R9T I;  1Q7Y 1;  1VQN 1;  2QEX 1;  1DL6 A;  1Q81 1;  1VQ8 1;  1KRL A;  1YJN 1;  1VQ7 1;  2JA5 I;  2NVX I;  1Q86 2;  3G6E 1;  2IV2 X;  3GCF A;  2VUG A;  3NH8 A;  5T6B A;  3NH5 A;  3Q87 A;  3S2H I;  1N2F A;  2NAP A;  2BJO A;  3BG0 B;  3MON A;  5FLX f;  1YJ9 1;  3CCQ Z;  1S72 Z;  4A3L I;  2WAQ A;  3J80 b;  1Z02 A;  3IX0 A;  2J6A A;  1YIT 1;  3S15 I;  2GTH A;  1Z03 A;  2P3Y A;  4NBE A;  4BY1 I;  1Q16 A;  5IT9 b;  1NJI 1;  1I6H I;  5T64 A;  2B63 I;  2P28 A;  4MON A;  3J7A 4;  3MZL B;  4A3G I;  3TDH B;  3D6W A;  4A3B I;  3CPW Z;  4AYB A;  2OOY B;  4DQY B;  2JIP A;  5D1O B;  1K8A 1;  3OW2 Y;  1YUA A;  1YI2 Z;  3CCE 1;  3I56 Z;  1QVG Z;  3EED A;  4A93 I;  1VQK 1;  2KPI A;  2G2K A;  3CCL 1;  2RPR A;  3GTM S;  5FLX b;  4BBR I;  1USP B;  5CM2 M;  2OTL 1;  2QKD A;  1TWF I;  4MD9 A;  3S2D I;  4NBA A;  3S1R I;  4EWC A;  4DGL A;  2QRE B;  3CC2 1;  4MD8 A;  2E2J I;  1Q82 2;  4QTU A;  3CCJ 1;  4A3K I;  3RZO I;  3CXC Z;  1RO2 A;  4E2Y A;  4XX2 A;  4HGY A;  1X3W A;  1VQ5 1;  2VPZ A;  3LUS A;  3JAM f;  1SIW A;  2QA4 Z;  2Q51 A;  1Q82 1;  1KC8 2;  3BG1 B;  2HF1 A;  1K9M 1;  4E2W A;  1Y8C A;  5FLM I;  4A3E I;  1I3Q I;  4QTT A;  3FQQ A;  5C4X I;  2W04 A;  1X3Z A;  1WII A;  1TWC I;  1TWG I;  4NBF A;  1Z01 A;  2QRC B;  3CXC Y;  1VQ6 Z;  3G71 Z;  3M3Y I;  3I55 Z;  2AYD A;  3S1Q I;  5C44 I;  3CCM Z;  1LQL A;  3TE5 B;  2V8I A;  3FQM A;  3CCS 1;  2QRD B;  1K73 2;  3CD6 1;  3S1N I;  3CC4 Z;  1JJ2 Y;  1QVF Z;  4BY7 I;  2V8K A;  1YI2 1;  3FKI I;  3HOY I;  3HOZ I;  4NH1 C;  1YIJ 1;  4BBS I;  1WZN A;  2E9H A;  3U50 C;  2V8J A;  1VLA A;  3H3V J;  4DK1 A;  1YHQ Z;  3T4N B;  2O53 A;  3JAM b;  4RVF A;  4E32 A;  1W2B Y;  3GTG I;  1Q86 1;  2K3R A;  1ML8 A;  3H0G I;  1RNI A;  3HOU I;  2JIR A;  1S7M A;  1NUI A;  1QYP A;  1YJW Z;  3S16 I;  2JNY A;  3CC7 1;  1QVF Y;  3G4S Z;  4E31 A;  3HOV I;  3CME 1;  2R7Z I;  1VQL 1;  3GKQ A;  2NVT I;  1VQ4 1;  3CMA Z;  1KQS Z;  1VQM 1;  1FDI A;  2QLV B;  4E2X A;  2JMO A;  3EER A;  5A2Q f;  3CCV 1;  1VQP Z;  1ZH1 A;  1FDO A;  2F4O A;  2NVY I;  4NBG A;  1N8R 2;  3MZK B;  5T67 A;  2GTI A;  2HU9 A;  2O4H A;  4RVD A;  1VQ6 1;  2OTJ Z;  4NOZ A;  5AN9 F;  2M6N A;  1VQO Z;  2YU9 I;  1VQN Z;  2QEX Z;  3GTO I;  2JS4 A;  1VQ8 Z;  1M1K 2;  3IF8 A;  4E2Z A;  1Y1W I;  2EGT A;  3IR7 A;  2R6M A;  3G6E Z;  2JA7 I;  1RO0 A;  4RVH A;  2M48 A;  3ESW A;  3CPW Y;  4Y52 I;  4Y7N I;  1L1O C;  1KD1 2;  3HOW I;  4BXX I;  4MXU A;  1QXF A;  2VUM I;  4HH4 A;  1I50 I;  1QF8 A;  5C4J I;  1K83 I;  2E2I I;  5D1O A;  1QVG Y;  4NFR A;  4RV9 A;  1YJ9 Z;  3F3F C;  1M90 2;  3NDI A;  4MRI A;  2QR1 B;  2RHB A;  3CCU Z;  2JIO A;  3CCQ 1;  1S72 1;  2JIQ A;  1KD1 1;  1P9N A;  1TFI A;  4NBH A;  1YIT Z;  3VMG A;  1USP A;  5A2Q b;  1NP6 A;  4CL1 A;  4A3J I;  2IZ4 A;  2V45 A;  5IP7 I;  1Y1V S;  3GTM I;  3VTN A;  2RT9 A;  4E33 A;  2VF1 A;  4A3D I;  3NH4 A;  1KC8 1;  4A3F I;  2DE7 A;  4X6A I;  3NFZ A;  1Q7Y 2;  3GTK I;  3IFU A;  2R93 I;  1Q81 2;  1VQ9 Z;  1VQK Z;  4MD7 A;  3I56 1;  3S1M I;  2JUB A;  2OTJ 1;  3D2L A;  1TWH I;  2GU2 A;  1K73 1;  2PM9 A;  4NBD A;  2F4M A;  3CC2 Z;  1ZB8 A;  4TNU A;  3RZD I;  3CCJ Z;  2RBL A;  2NVQ I;  3CQZ I;  2E2H I;  4RS4 A;  3I4N I;  1Y1V I;  4MH4 A;  4HGZ A;  2DE5 A;  3HOX I;  2K5R A;  3HKZ A;  3NDJ A;  1VQ5 Z;  3VB9 A;  3GTP I;  2RIQ A;  2OOX B;  1NJI 2;  2JIM A;  3CCU 1;  1RLY A;  1YUK A;  2YAD A;  3OW2 Z;  5C3E I;  2QA4 1;  3S17 I;  4S1T A;  2JR6 A;  1JWH C;  2IZ3 A;  2I3C A;  2WB1 A;  2JA6 I;  2LEX A;  1K8A 2;  4A3M I;  3PO2 I;  4NB9 A;  3CCR Z;  5D1P A;  3GTL I;  2V3V A;  4A3C I;  3G71 1;  1SFO I;  1ZB9 A;  3I55 1; 
#chains in the Genus database with same CATH homology
 3CCS Z;  4NBC A;  3CCM 1;  2Y0S A;  2KI7 B;  4NB8 A;  1YJN Z;  1VQ7 Z;  3CD6 Z;  3J81 f;  1KQS Y;  2LFU A;  1WW9 A;  3D9X A;  1VQ9 1;  1N8R 1;  3CC4 1;  1YIJ Z;  1TWA I;  5LL6 f;  4E30 A;  2H85 A;  1M1K 1;  3PO3 S;  3GTQ I;  3S14 I;  3KIH A;  1YHQ 1;  4NBB A;  1RQF A;  4RVG A;  3P5J B;  3M4O I;  2OZK A;  3I4M I;  1RO4 A;  3QWU A;  1X0T A;  2ZAE B;  3CC7 Z;  1K9M 2;  3GTJ I;  1M90 1;  3CME Z;  1YJW 1;  2LIY A;  3G4S 1;  1WCM I;  1VQL Z;  2R92 I;  1PFT A;  1VQ4 Z;  2PK7 A;  1VQM Z;  2AKL A;  4A3I I;  3J80 f;  2W03 A;  5IP9 I;  3CMA 1;  3VMH A;  3J81 b;  1JJ2 Z;  2PMZ A;  3K7A I;  3CCV Z;  3CCE Z;  2JA8 I;  1VQP 1;  3CCL Z;  3I07 A;  3VMI A;  5IT9 f;  3PO3 I;  3CCR 1;  2Q4Z A;  2DE6 A;  3KIF A;  1W2B Z;  3F3P C;  2OTL Z;  1VQO 1;  1R9T I;  1Q7Y 1;  1VQN 1;  2QEX 1;  1DL6 A;  1Q81 1;  1VQ8 1;  1KRL A;  1YJN 1;  1VQ7 1;  2JA5 I;  2NVX I;  1Q86 2;  3G6E 1;  3GCF A;  2VUG A;  3NH8 A;  5T6B A;  3NH5 A;  3Q87 A;  3S2H I;  1N2F A;  2BJO A;  3BG0 B;  3MON A;  5FLX f;  1YJ9 1;  3CCQ Z;  1S72 Z;  4A3L I;  2WAQ A;  3J80 b;  1Z02 A;  3IX0 A;  2J6A A;  1YIT 1;  3S15 I;  2GTH A;  1Z03 A;  2P3Y A;  4NBE A;  4BY1 I;  5IT9 b;  1NJI 1;  1I6H I;  5T64 A;  2B63 I;  2P28 A;  4MON A;  3J7A 4;  3MZL B;  4A3G I;  3TDH B;  3D6W A;  4A3B I;  3CPW Z;  4AYB A;  2OOY B;  4DQY B;  5D1O B;  1K8A 1;  3OW2 Y;  1YUA A;  1YI2 Z;  3CCE 1;  3I56 Z;  1QVG Z;  3EED A;  4A93 I;  1VQK 1;  2KPI A;  2G2K A;  3CCL 1;  2RPR A;  3GTM S;  5FLX b;  4BBR I;  1USP B;  5CM2 M;  2OTL 1;  2QKD A;  1TWF I;  4MD9 A;  3S2D I;  4NBA A;  3S1R I;  4EWC A;  4DGL A;  2QRE B;  3CC2 1;  4MD8 A;  2E2J I;  1Q82 2;  4QTU A;  3CCJ 1;  4A3K I;  3RZO I;  3CXC Z;  1RO2 A;  4E2Y A;  4XX2 A;  4HGY A;  1X3W A;  1VQ5 1;  3LUS A;  3JAM f;  2QA4 Z;  2Q51 A;  1Q82 1;  1KC8 2;  3BG1 B;  2HF1 A;  1K9M 1;  4E2W A;  5FLM I;  4A3E I;  1I3Q I;  4QTT A;  3FQQ A;  5C4X I;  2W04 A;  1X3Z A;  1WII A;  1TWC I;  1TWG I;  4NBF A;  1Z01 A;  2QRC B;  3CXC Y;  1VQ6 Z;  3G71 Z;  3M3Y I;  3I55 Z;  3S1Q I;  5C44 I;  3CCM Z;  1LQL A;  3TE5 B;  2V8I A;  3FQM A;  3CCS 1;  2QRD B;  1K73 2;  3CD6 1;  3S1N I;  3CC4 Z;  1JJ2 Y;  1QVF Z;  4BY7 I;  2V8K A;  1YI2 1;  3FKI I;  3HOY I;  3HOZ I;  4NH1 C;  1YIJ 1;  4BBS I;  2E9H A;  3U50 C;  2V8J A;  1VLA A;  3H3V J;  4DK1 A;  1YHQ Z;  3T4N B;  2O53 A;  3JAM b;  4RVF A;  4E32 A;  1W2B Y;  3GTG I;  1Q86 1;  2K3R A;  1ML8 A;  3H0G I;  1RNI A;  3HOU I;  1S7M A;  1NUI A;  1QYP A;  1YJW Z;  3S16 I;  2JNY A;  3CC7 1;  1QVF Y;  3G4S Z;  4E31 A;  3HOV I;  3CME 1;  2R7Z I;  1VQL 1;  3GKQ A;  2NVT I;  1VQ4 1;  3CMA Z;  1KQS Z;  1VQM 1;  2QLV B;  4E2X A;  2JMO A;  3EER A;  5A2Q f;  3CCV 1;  1VQP Z;  1ZH1 A;  2F4O A;  2NVY I;  4NBG A;  1N8R 2;  3MZK B;  5T67 A;  2GTI A;  2HU9 A;  2O4H A;  4RVD A;  1VQ6 1;  2OTJ Z;  4NOZ A;  5AN9 F;  2M6N A;  1VQO Z;  2YU9 I;  1VQN Z;  2QEX Z;  3GTO I;  2JS4 A;  1VQ8 Z;  1M1K 2;  3IF8 A;  4E2Z A;  1Y1W I;  2EGT A;  2R6M A;  3G6E Z;  2JA7 I;  1RO0 A;  4RVH A;  2M48 A;  3ESW A;  3CPW Y;  4Y52 I;  4Y7N I;  1L1O C;  1KD1 2;  3HOW I;  4BXX I;  4MXU A;  2VUM I;  4HH4 A;  1I50 I;  1QF8 A;  1K83 I;  5C4J I;  2E2I I;  5D1O A;  1QVG Y;  4NFR A;  4RV9 A;  1YJ9 Z;  3F3F C;  1M90 2;  3NDI A;  4MRI A;  2QR1 B;  2RHB A;  3CCU Z;  3CCQ 1;  1S72 1;  1KD1 1;  1P9N A;  1TFI A;  4NBH A;  1YIT Z;  3VMG A;  1USP A;  5A2Q b;  1NP6 A;  4CL1 A;  4A3J I;  2IZ4 A;  5IP7 I;  1Y1V S;  3GTM I;  3VTN A;  2RT9 A;  4E33 A;  2VF1 A;  4A3D I;  3NH4 A;  1KC8 1;  4A3F I;  2DE7 A;  4X6A I;  3NFZ A;  1Q7Y 2;  3GTK I;  3IFU A;  2R93 I;  1Q81 2;  1VQ9 Z;  1VQK Z;  4MD7 A;  3I56 1;  3S1M I;  2JUB A;  2OTJ 1;  1TWH I;  2GU2 A;  1K73 1;  2PM9 A;  4NBD A;  2F4M A;  3CC2 Z;  1ZB8 A;  4TNU A;  3RZD I;  3CCJ Z;  2RBL A;  2NVQ I;  3CQZ I;  2E2H I;  4RS4 A;  3I4N I;  1Y1V I;  4MH4 A;  4HGZ A;  2DE5 A;  3HOX I;  2K5R A;  3HKZ A;  3NDJ A;  1VQ5 Z;  3VB9 A;  3GTP I;  2RIQ A;  2OOX B;  1NJI 2;  3CCU 1;  1RLY A;  1YUK A;  2YAD A;  3OW2 Z;  5C3E I;  2QA4 1;  3S17 I;  4S1T A;  2JR6 A;  1JWH C;  2IZ3 A;  2I3C A;  2WB1 A;  2JA6 I;  1K8A 2;  4A3M I;  3PO2 I;  4NB9 A;  3CCR Z;  5D1P A;  3GTL I;  4A3C I;  3G71 1;  1SFO I;  1ZB9 A;  3I55 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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