3S1QI

Rna polymerase ii initiation complex with a 5-nt 3'-deoxy rna soaked with atp
Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (7-10)TIV1 (8-11)TIV3 (29-32)S1 (14-18)TI2 (20-23)S2 (25-29)S3 (35-37)TIV4 (47-50)TII1 (51-54)TI4 (59-62)TIV5 (55-58)TI6 (103-106)3H1 (62-64)TI5 (65-68)S4 (83-87)TIV6 (75-78)TIV7 (76-79)S5 (99-103)TIV8 (92-95)S6 (109-111)TIV9 (104-107)TIV10 (113-116)TIV2 (19-22)Updating...
connected with : NaN
molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 15
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s1qI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s1qI02
3S17I 2JA8I 2RBLA 3S15I 4NBHA 1R9TI 2F4MA 4NBGA 1Y1VS 3U50C 4X6AI 4A3JI 2P3YA 4NB8A 1VLAA 3GTKI 3GTGI 2B63I 1I6HI 4NBCA 4A3II 3RZOI 2DE6A 3S1MI 3S2DI 3M4OI 2NVTI 3S14I 4BY7I 1TWGI 1I50I 2JR6A 3ESWA 1TWAI 3FKII 4QTUA 2BJOA 3GTQI 2R7ZI 4A3EI 3S16I 3VB9A 4BY1I 2JA7I 3LUSA 4A3CI 1PFTA 2VUMI 3VMHA 2JA6I 5C4JI 4NBAA 1QYPA 2NVYI 1RO4A 1RLYA 2JS4A 3I07A 1WW9A 4A3DI 3EERA 5C3EI 3GTJI 3HOYI 4A3KI 3PO3I 1Y1VI 4NOZA 1DL6A 1K83I 2E2HI 2K5RA 3HOUI 1X3ZA 4A3GI 1USPB 2J6AA 2YU9I 2HF1A 4NBDA 3S1NI 2R92I 1TFIA 4NBFA 2PK7A 2F4OA 3VMIA 4A3FI 5IP7I 4BBSI 3D6WA 1TWFI 1I3QI 3GCFA 3HOXI 1X3WA 1SFOI 3GTLI 1LQLA 1WCMI 3I4MI 4NB9A 5FLMI 3GTMI 2AKLA 5C4XI 5CM2M 1USPA 1YUAA 3CQZI 4A3LI 4XX2A 3PO2I 4BXXI 4BBRI 1ZB8A 5IP9I 5C44I 2DE5A 1TWHI 2NVXI 3K7AI 2JA5I 3GTOI 3PO3S 3GKQA 3GTPI 2KPIA 4A3BI 3M3YI 1Y1WI 4A93I 3S2HI 3H0GI 3VMGA 4NBEA 3RZDI 3HOWI 3S1QI 4QTTA 2JNYA 3Q87A 3HOZI 3I4NI 2E2JI 4Y52I 1N2FA 4NBBA 3S1RI 2R93I 1NUIA 2DE7A 3H3VJ 2NVQI 4MH4A 1ZB9A 1TWCI 3GTMS 3HOVI 1L1OC 4A3MI 2E2II 4Y7NI 1ML8A
chains in the Genus database with same CATH superfamily
1JWHC 2JA8I 2RBLA 3S15I 3CMEZ 4MD9A 1VQ61 1KC82 4RVDA 1Z03A 4CL1A 4NBGA 4E2ZA 1VQPZ 1Z02A 1VQOZ 2QR1B 3GTKI 1Q862 1I6HI 4RVGA 2OOXB 2E9HA 3S1MI 3M4OI 1N8R1 2NVTI 3IR7A 1TWAI 2JIPA 3GTQI 3CCM1 1KD11 3TE5B 2IZ3A 3NDJA 4A3EI 2M6NA 5AN9F 2OOYB 3LUSA 2W04A 4A3CI 2VUMI 3CXCZ 2JA6I 5C4JI 1QVGZ 3OW2Z 1VQ71 1QYPA 1Y8CA 3CCR1 1VQKZ 1Q16A 1RO4A 2V45A 3MZKB 2JS4A 4A3DI 1JJ2Z 3KIHA 1FDOA 3HOYI 4MRIA 3PO3I 1Y1VI 2K5RA 3HOUI 1YJ91 4A3GI 2JUBA 2R92I 1TFIA 4E2XA 2P28A 3VMIA 2RPRA 3CCLZ 3HOXI 2OZKA 1X3WA 2YADA 2VPWA 3CMAZ 1WCMI 3GTMI 5C4XI 3CC7Z 1YIJZ 2OTJZ 2QLVB 3G711 3CQZI 4A3LI 3I56Z 3CCSZ 3PO2I 4BXXI 4BBRI 1VQ8Z 5C44I 2DE5A 1VQL1 1TWHI 2NVXI 3GTOI 2R6MA 1K9M1 1Q822 3NH5A 1YI2Z 1Y1WI 3S2HI 2IZ4A 1YJNZ 3CCV1 3H0GI 3RZDI 2GTIA 2LFUA 3HOWI 1QVFZ 1Q7Y2 1RNIA 3F3PC 2E2JI 4Y52I 2QA41 1NP6A 3S1RI 2R93I 2DE7A 1K731 2JIOA 2LIYA 1KQSZ 1M1K1 4E2YA 3HOVI 2QKDA 3S17I 1QVGY 3OW2Y 2M48A 2K3RA 3CCUZ 1Y1VS 2VF1A 1JJ2Y 4A3JI 1QXFA 3IF8A 4NB8A 5FLXf 1FDIA 1Q811 2B63I 4A3II 1ZH1A 1K8A2 2DE6A 3CCJZ 2W03A 4DK1A 4RVHA 3S14I 4E33A 1S721 2PM9A 2JR6A 3G6EZ 3G4SZ 1VQM1 4QTUA 2O4HA 5T64A 1VQO1 3S16I 1QF8A 5IT9b 2ZAEB 2VUGA 4NBAA 1P9NA 2PMZA 3CPWZ 1WW9A 1M901 1NJI1 3J81f 4E2WA 1QVFY 3D9XA 4NOZA 2EGTA 2E2HI 4MD7A 2J6AA 3IX0A 3S1NI 2PK7A 2F4OA 1KQSY 1W2BZ 3J7A4 3TDHB 1TWFI 3CC2Z 1LQLA 1YIT1 1WIIA 4DQYB 1WZNA 2AKLA 5CM2M 1USPA 3D2LA 1YUAA 4S1TA 4XX2A 4EWCA 1N8R2 2I3CA 4MD8A 1YUKA 2JMOA 3CC41 5FLXb 4A93I 1KD12 2OTLZ 3VMGA 2RIQA 2QREB 4NBEA 3CC71 5IT9f 1YIJ1 3S1QI 2OTJ1 4QTTA 2JNYA 3NDIA 1YHQZ 4RV9A 1X0TA 1VQ7Z 1L1OC 1AA6A 1VQ41 3CCRZ 1ML8A 1R9TI 1VQ5Z 2G2KA 4E32A 4NFRA 2F4MA 3CPWY 1VQN1 2LEXA 4X6AI 2P3YA 1VLAA 3GTGI 5T67A 3EEDA 2AYDA 4NBCA 4AYBA 3IFUA 3RZOI 3FQMA 3J81b 2VPZA 3CCU1 1W2BY 3VTNA 2QRCB 1Z01A 3ESWA 3FKII 2KI7B 3CCQZ 2R7ZI 3G71Z 3VB9A 2V8JA 3NFZA 3CCEZ 2RT9A 1VQLZ 1K8A1 1KRLA 3VMHA 3G6E1 3CCVZ 1RLYA 3I07A 3CME1 3EERA 1KC81 3JAMf 3GTJI 3MONA 2QA4Z 1VQP1 4A3KI 4E30A 1DL6A 1K83I 2WB1A 1X3ZA 1Q861 3CD6Z 1USPB 2O53A 2HF1A 4RVFA 4NBDA 4MXUA 1YJWZ 4NBFA 1I3QI 2H85A 3GCFA 1SFOI 3GTLI 3MZLB 2QEXZ 1Q812 1VQ9Z 2WAQA 4E31A 1S7MA 3NH4A 4RS4A 5T6BA 3I55Z 4NH1C 1S72Z 3CC21 4HH4A 1VQMZ 2JIRA 1VQK1 2V3VA 2V8IA 3HKZA 3KIFA 2JIMA 1VQ6Z 2V8KA 3P5JB 3HOZI 1N2FA 4NBBA 3J80f 2VPXA 1NUIA 1RO2A 4MH4A 2RHBA 1RQFA 5D1PA 4A3MI 4Y7NI 2OTL1 4TNUA 4NBHA 1M902 3CCL1 1NJI2 2HU9A 5LL6f 1YHQ1 3U50C 3CMA1 3CCMZ 2Q51A 3QWUA 2IV2X 2GTHA 3I561 2Q4ZA 3CCS1 1VQ51 1VQ81 3S2DI 3JAMb 4BY7I 1TWGI 1I50I 5A2Qf 2E7ZA 1YITZ 1Q821 2NAPA 2BJOA 1YI21 5D1OB 2Y0SA 1YJN1 4DGLA 3BG1B 2QRDB 1Q7Y1 4BY1I 2JA7I 1PFTA 2JIQA 1YJ9Z 3CC4Z 4HGYA 3CCQ1 2NVYI 5C3EI 3CCE1 3BG0B 3NH8A 1VQ4Z 2YU9I 4A3FI 5IP7I 4BBSI 3D6WA 3CCJ1 3FQQA 1K9M2 3J80b 1VQNZ 2VPYA 5D1OA 3I4MI 1WJ2A 1SIWA 3G4S1 4NB9A 5FLMI 3F3FC 3CD61 3CXCY 1YJW1 4MONA 5IP9I 1ZB8A 1K732 3K7AI 2JA5I 3PO3S 2GU2A 3GKQA 2KPIA 1M1K2 3GTPI 3M3YI 4A3BI 2QEX1 1RO0A 3T4NB 1VQ91 3Q87A 3I4NI 5A2Qb 3H3VJ 2NVQI 3I551 1ZB9A 1TWCI 3GTMS 2E2II 4HGZA
chains in the Genus database with same CATH topology
1JWHC 2JA8I 2RBLA 3S15I 3CMEZ 4MD9A 1VQ61 1KC82 4RVDA 1Z03A 4CL1A 4NBGA 4E2ZA 1VQPZ 1Z02A 1VQOZ 2QR1B 3GTKI 1Q862 1I6HI 4RVGA 2OOXB 2E9HA 3S1MI 3M4OI 1N8R1 2NVTI 1TWAI 3GTQI 3CCM1 1KD11 3TE5B 2IZ3A 3NDJA 4A3EI 2M6NA 5AN9F 2OOYB 3LUSA 2W04A 4A3CI 2VUMI 3CXCZ 2JA6I 5C4JI 1QVGZ 3OW2Z 1VQ71 1QYPA 3CCR1 1VQKZ 1RO4A 3MZKB 2JS4A 4A3DI 1JJ2Z 3KIHA 3HOYI 4MRIA 3PO3I 1Y1VI 2K5RA 3HOUI 1YJ91 4A3GI 2JUBA 2R92I 1TFIA 4E2XA 2P28A 3VMIA 2RPRA 3CCLZ 3HOXI 2OZKA 1X3WA 2YADA 3CMAZ 1WCMI 3GTMI 5C4XI 3CC7Z 1YIJZ 2OTJZ 2QLVB 3G711 3CQZI 4A3LI 3I56Z 3CCSZ 3PO2I 4BXXI 4BBRI 1VQ8Z 5C44I 2DE5A 1VQL1 1TWHI 2NVXI 3GTOI 2R6MA 1K9M1 1Q822 3NH5A 1YI2Z 1Y1WI 3S2HI 2IZ4A 1YJNZ 3CCV1 3RZDI 3H0GI 2GTIA 2LFUA 3HOWI 1QVFZ 1Q7Y2 1RNIA 3F3PC 2E2JI 4Y52I 2QA41 1NP6A 3S1RI 2R93I 2DE7A 1K731 2LIYA 1KQSZ 1M1K1 4E2YA 3HOVI 2QKDA 3S17I 1QVGY 3OW2Y 2M48A 2K3RA 3CCUZ 1Y1VS 2VF1A 1JJ2Y 4A3JI 3IF8A 4NB8A 5FLXf 1Q811 2B63I 4A3II 1ZH1A 1K8A2 2DE6A 3CCJZ 2W03A 4DK1A 4RVHA 3S14I 4E33A 1S721 2PM9A 2JR6A 3G6EZ 3G4SZ 1VQM1 4QTUA 2O4HA 5T64A 1VQO1 3S16I 1QF8A 5IT9b 2ZAEB 2VUGA 4NBAA 1P9NA 2PMZA 3CPWZ 1WW9A 1M901 1NJI1 3J81f 4E2WA 1QVFY 3D9XA 4NOZA 2EGTA 2E2HI 4MD7A 2J6AA 3IX0A 3S1NI 2PK7A 2F4OA 1KQSY 1W2BZ 3J7A4 3TDHB 1TWFI 3CC2Z 1LQLA 1YIT1 1WIIA 4DQYB 2AKLA 5CM2M 1USPA 4S1TA 1YUAA 4XX2A 4EWCA 1N8R2 2I3CA 4MD8A 1YUKA 2JMOA 3CC41 5FLXb 4A93I 1KD12 2OTLZ 3VMGA 2RIQA 2QREB 4NBEA 3CC71 5IT9f 1YIJ1 3S1QI 2OTJ1 4QTTA 2JNYA 3NDIA 1YHQZ 4RV9A 1X0TA 1VQ7Z 1L1OC 1VQ41 3CCRZ 1ML8A 1R9TI 1VQ5Z 2G2KA 4E32A 4NFRA 2F4MA 3CPWY 1VQN1 4X6AI 2P3YA 1VLAA 3GTGI 5T67A 3EEDA 4NBCA 4AYBA 3IFUA 3RZOI 3FQMA 3J81b 3CCU1 1W2BY 3VTNA 2QRCB 1Z01A 3ESWA 3FKII 2KI7B 3CCQZ 2R7ZI 3G71Z 3VB9A 2V8JA 3NFZA 3CCEZ 2RT9A 1VQLZ 1K8A1 1KRLA 3VMHA 3G6E1 3CCVZ 1RLYA 3I07A 3CME1 3EERA 1KC81 3JAMf 3GTJI 3MONA 2QA4Z 1VQP1 4A3KI 4E30A 1DL6A 1K83I 2WB1A 1X3ZA 1Q861 3CD6Z 1USPB 2O53A 2HF1A 4RVFA 4NBDA 4MXUA 1YJWZ 4NBFA 1I3QI 2H85A 3GCFA 1SFOI 3GTLI 3MZLB 2QEXZ 1Q812 1VQ9Z 2WAQA 4E31A 1S7MA 3NH4A 4RS4A 5T6BA 3I55Z 4NH1C 1S72Z 3CC21 4HH4A 1VQMZ 1VQK1 2V8IA 3HKZA 3KIFA 1VQ6Z 2V8KA 3P5JB 3HOZI 1N2FA 4NBBA 3J80f 1NUIA 1RO2A 4MH4A 2RHBA 1RQFA 5D1PA 4A3MI 4Y7NI 2OTL1 4TNUA 4NBHA 1M902 3CCL1 1NJI2 2HU9A 5LL6f 1YHQ1 3U50C 3CMA1 3CCMZ 2Q51A 3QWUA 2GTHA 3I561 2Q4ZA 3CCS1 1VQ51 1VQ81 3S2DI 3JAMb 4BY7I 1TWGI 1I50I 5A2Qf 1YITZ 1Q821 2BJOA 1YI21 5D1OB 2Y0SA 1YJN1 4DGLA 3BG1B 2QRDB 1Q7Y1 4BY1I 2JA7I 1PFTA 1YJ9Z 3CC4Z 4HGYA 3CCQ1 2NVYI 5C3EI 3CCE1 3BG0B 3NH8A 1VQ4Z 2YU9I 4A3FI 5IP7I 4BBSI 3D6WA 3CCJ1 3FQQA 1K9M2 3J80b 1VQNZ 5D1OA 3I4MI 3G4S1 4NB9A 5FLMI 3F3FC 3CD61 3CXCY 1YJW1 4MONA 5IP9I 1ZB8A 1K732 3K7AI 2JA5I 3PO3S 2GU2A 3GKQA 2KPIA 1M1K2 3GTPI 3M3YI 4A3BI 2QEX1 1RO0A 3T4NB 1VQ91 3Q87A 3I4NI 5A2Qb 3H3VJ 2NVQI 3I551 1ZB9A 1TWCI 3GTMS 2E2II 4HGZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S17 I;  2JA8 I;  2RBL A;  3S15 I;  4NBH A;  1R9T I;  2F4M A;  4NBG A;  1Y1V S;  3U50 C;  4X6A I;  4A3J I;  2P3Y A;  4NB8 A;  1VLA A;  3GTK I;  3GTG I;  2B63 I;  1I6H I;  4NBC A;  4A3I I;  3RZO I;  2DE6 A;  3S1M I;  3S2D I;  3M4O I;  2NVT I;  3S14 I;  4BY7 I;  1TWG I;  1I50 I;  2JR6 A;  3ESW A;  1TWA I;  3FKI I;  4QTU A;  2BJO A;  3GTQ I;  2R7Z I;  4A3E I;  3S16 I;  3VB9 A;  4BY1 I;  2JA7 I;  3LUS A;  4A3C I;  1PFT A;  2VUM I;  3VMH A;  2JA6 I;  5C4J I;  4NBA A;  1QYP A;  2NVY I;  1RO4 A;  1RLY A;  2JS4 A;  3I07 A;  1WW9 A;  4A3D I;  3EER A;  5C3E I;  3GTJ I;  3HOY I;  4A3K I;  3PO3 I;  1Y1V I;  4NOZ A;  1DL6 A;  1K83 I;  2E2H I;  2K5R A;  3HOU I;  1X3Z A;  4A3G I;  1USP B;  2J6A A;  2YU9 I;  2HF1 A;  4NBD A;  3S1N I;  2R92 I;  1TFI A;  4NBF A;  2PK7 A;  2F4O A;  3VMI A;  4A3F I;  5IP7 I;  4BBS I;  3D6W A;  1TWF I;  1I3Q I;  3GCF A;  3HOX I;  1X3W A;  1SFO I;  3GTL I;  1LQL A;  1WCM I;  3I4M I;  4NB9 A;  5FLM I;  3GTM I;  2AKL A;  5C4X I;  5CM2 M;  1USP A;  1YUA A;  3CQZ I;  4A3L I;  4XX2 A;  3PO2 I;  4BXX I;  4BBR I;  1ZB8 A;  5IP9 I;  5C44 I;  2DE5 A;  1TWH I;  2NVX I;  3K7A I;  2JA5 I;  3GTO I;  3PO3 S;  3GKQ A;  3GTP I;  2KPI A;  4A3B I;  3M3Y I;  1Y1W I;  4A93 I;  3S2H I;  3H0G I;  3VMG A;  4NBE A;  3RZD I;  3HOW I;  3S1Q I;  4QTT A;  2JNY A;  3Q87 A;  3HOZ I;  3I4N I;  2E2J I;  4Y52 I;  1N2F A;  4NBB A;  3S1R I;  2R93 I;  1NUI A;  2DE7 A;  3H3V J;  2NVQ I;  4MH4 A;  1ZB9 A;  1TWC I;  3GTM S;  3HOV I;  1L1O C;  4A3M I;  2E2I I;  4Y7N I;  1ML8 A; 
#chains in the Genus database with same CATH topology
 1JWH C;  2JA8 I;  2RBL A;  3S15 I;  3CME Z;  4MD9 A;  1VQ6 1;  1KC8 2;  4RVD A;  1Z03 A;  4CL1 A;  4NBG A;  4E2Z A;  1VQP Z;  1Z02 A;  1VQO Z;  2QR1 B;  3GTK I;  1Q86 2;  1I6H I;  4RVG A;  2OOX B;  2E9H A;  3S1M I;  3M4O I;  1N8R 1;  2NVT I;  3IR7 A;  1TWA I;  2JIP A;  3GTQ I;  3CCM 1;  1KD1 1;  3TE5 B;  2IZ3 A;  3NDJ A;  4A3E I;  2M6N A;  5AN9 F;  2OOY B;  3LUS A;  2W04 A;  4A3C I;  2VUM I;  3CXC Z;  2JA6 I;  5C4J I;  1QVG Z;  3OW2 Z;  1VQ7 1;  1QYP A;  1Y8C A;  3CCR 1;  1VQK Z;  1Q16 A;  1RO4 A;  2V45 A;  3MZK B;  2JS4 A;  4A3D I;  1JJ2 Z;  3KIH A;  1FDO A;  3HOY I;  4MRI A;  3PO3 I;  1Y1V I;  2K5R A;  3HOU I;  1YJ9 1;  4A3G I;  2JUB A;  2R92 I;  1TFI A;  4E2X A;  2P28 A;  3VMI A;  2RPR A;  3CCL Z;  3HOX I;  2OZK A;  1X3W A;  2YAD A;  2VPW A;  3CMA Z;  1WCM I;  3GTM I;  5C4X I;  3CC7 Z;  1YIJ Z;  2OTJ Z;  2QLV B;  3G71 1;  3CQZ I;  4A3L I;  3I56 Z;  3CCS Z;  3PO2 I;  4BXX I;  4BBR I;  1VQ8 Z;  5C44 I;  2DE5 A;  1VQL 1;  1TWH I;  2NVX I;  3GTO I;  2R6M A;  1K9M 1;  1Q82 2;  3NH5 A;  1YI2 Z;  1Y1W I;  3S2H I;  2IZ4 A;  1YJN Z;  3CCV 1;  3H0G I;  3RZD I;  2GTI A;  2LFU A;  3HOW I;  1QVF Z;  1Q7Y 2;  1RNI A;  3F3P C;  2E2J I;  4Y52 I;  2QA4 1;  1NP6 A;  3S1R I;  2R93 I;  2DE7 A;  1K73 1;  2JIO A;  2LIY A;  1KQS Z;  1M1K 1;  4E2Y A;  3HOV I;  2QKD A;  3S17 I;  1QVG Y;  3OW2 Y;  2M48 A;  2K3R A;  3CCU Z;  1Y1V S;  2VF1 A;  1JJ2 Y;  4A3J I;  1QXF A;  3IF8 A;  4NB8 A;  5FLX f;  1FDI A;  1Q81 1;  2B63 I;  4A3I I;  1ZH1 A;  1K8A 2;  2DE6 A;  3CCJ Z;  2W03 A;  4DK1 A;  4RVH A;  3S14 I;  4E33 A;  1S72 1;  2PM9 A;  2JR6 A;  3G6E Z;  3G4S Z;  1VQM 1;  4QTU A;  2O4H A;  5T64 A;  1VQO 1;  3S16 I;  1QF8 A;  5IT9 b;  2ZAE B;  2VUG A;  4NBA A;  1P9N A;  2PMZ A;  3CPW Z;  1WW9 A;  1M90 1;  1NJI 1;  3J81 f;  4E2W A;  1QVF Y;  3D9X A;  4NOZ A;  2EGT A;  2E2H I;  4MD7 A;  2J6A A;  3IX0 A;  3S1N I;  2PK7 A;  2F4O A;  1KQS Y;  1W2B Z;  3J7A 4;  3TDH B;  1TWF I;  3CC2 Z;  1LQL A;  1YIT 1;  1WII A;  4DQY B;  1WZN A;  2AKL A;  5CM2 M;  1USP A;  3D2L A;  1YUA A;  4S1T A;  4XX2 A;  4EWC A;  1N8R 2;  2I3C A;  4MD8 A;  1YUK A;  2JMO A;  3CC4 1;  5FLX b;  4A93 I;  1KD1 2;  2OTL Z;  3VMG A;  2RIQ A;  2QRE B;  4NBE A;  3CC7 1;  5IT9 f;  1YIJ 1;  3S1Q I;  2OTJ 1;  4QTT A;  2JNY A;  3NDI A;  1YHQ Z;  4RV9 A;  1X0T A;  1VQ7 Z;  1L1O C;  1AA6 A;  1VQ4 1;  3CCR Z;  1ML8 A;  1R9T I;  1VQ5 Z;  2G2K A;  4E32 A;  4NFR A;  2F4M A;  3CPW Y;  1VQN 1;  2LEX A;  4X6A I;  2P3Y A;  1VLA A;  3GTG I;  5T67 A;  3EED A;  2AYD A;  4NBC A;  4AYB A;  3IFU A;  3RZO I;  3FQM A;  3J81 b;  2VPZ A;  3CCU 1;  1W2B Y;  3VTN A;  2QRC B;  1Z01 A;  3ESW A;  3FKI I;  2KI7 B;  3CCQ Z;  2R7Z I;  3G71 Z;  3VB9 A;  2V8J A;  3NFZ A;  3CCE Z;  2RT9 A;  1VQL Z;  1K8A 1;  1KRL A;  3VMH A;  3G6E 1;  3CCV Z;  1RLY A;  3I07 A;  3CME 1;  3EER A;  1KC8 1;  3JAM f;  3GTJ I;  3MON A;  2QA4 Z;  1VQP 1;  4A3K I;  4E30 A;  1DL6 A;  1K83 I;  2WB1 A;  1X3Z A;  1Q86 1;  3CD6 Z;  1USP B;  2O53 A;  2HF1 A;  4RVF A;  4NBD A;  4MXU A;  1YJW Z;  4NBF A;  1I3Q I;  2H85 A;  3GCF A;  1SFO I;  3GTL I;  3MZL B;  2QEX Z;  1Q81 2;  1VQ9 Z;  2WAQ A;  4E31 A;  1S7M A;  3NH4 A;  4RS4 A;  5T6B A;  3I55 Z;  4NH1 C;  1S72 Z;  3CC2 1;  4HH4 A;  1VQM Z;  2JIR A;  1VQK 1;  2V3V A;  2V8I A;  3HKZ A;  3KIF A;  2JIM A;  1VQ6 Z;  2V8K A;  3P5J B;  3HOZ I;  1N2F A;  4NBB A;  3J80 f;  2VPX A;  1NUI A;  1RO2 A;  4MH4 A;  2RHB A;  1RQF A;  5D1P A;  4A3M I;  4Y7N I;  2OTL 1;  4TNU A;  4NBH A;  1M90 2;  3CCL 1;  1NJI 2;  2HU9 A;  5LL6 f;  1YHQ 1;  3U50 C;  3CMA 1;  3CCM Z;  2Q51 A;  3QWU A;  2IV2 X;  2GTH A;  3I56 1;  2Q4Z A;  3CCS 1;  1VQ5 1;  1VQ8 1;  3S2D I;  3JAM b;  4BY7 I;  1TWG I;  1I50 I;  5A2Q f;  2E7Z A;  1YIT Z;  1Q82 1;  2NAP A;  2BJO A;  1YI2 1;  5D1O B;  2Y0S A;  1YJN 1;  4DGL A;  3BG1 B;  2QRD B;  1Q7Y 1;  4BY1 I;  2JA7 I;  1PFT A;  2JIQ A;  1YJ9 Z;  3CC4 Z;  4HGY A;  3CCQ 1;  2NVY I;  5C3E I;  3CCE 1;  3BG0 B;  3NH8 A;  1VQ4 Z;  2YU9 I;  4A3F I;  5IP7 I;  4BBS I;  3D6W A;  3CCJ 1;  3FQQ A;  1K9M 2;  3J80 b;  1VQN Z;  2VPY A;  5D1O A;  3I4M I;  1WJ2 A;  1SIW A;  3G4S 1;  4NB9 A;  5FLM I;  3F3F C;  3CD6 1;  3CXC Y;  1YJW 1;  4MON A;  5IP9 I;  1ZB8 A;  1K73 2;  3K7A I;  2JA5 I;  3PO3 S;  2GU2 A;  3GKQ A;  2KPI A;  1M1K 2;  3GTP I;  3M3Y I;  4A3B I;  2QEX 1;  1RO0 A;  3T4N B;  1VQ9 1;  3Q87 A;  3I4N I;  5A2Q b;  3H3V J;  2NVQ I;  3I55 1;  1ZB9 A;  1TWC I;  3GTM S;  2E2I I;  4HGZ A; 
#chains in the Genus database with same CATH homology
 1JWH C;  2JA8 I;  2RBL A;  3S15 I;  3CME Z;  4MD9 A;  1VQ6 1;  1KC8 2;  4RVD A;  1Z03 A;  4CL1 A;  4NBG A;  4E2Z A;  1VQP Z;  1Z02 A;  1VQO Z;  2QR1 B;  3GTK I;  1Q86 2;  1I6H I;  4RVG A;  2OOX B;  2E9H A;  3S1M I;  3M4O I;  1N8R 1;  2NVT I;  1TWA I;  3GTQ I;  3CCM 1;  1KD1 1;  3TE5 B;  2IZ3 A;  3NDJ A;  4A3E I;  2M6N A;  5AN9 F;  2OOY B;  3LUS A;  2W04 A;  4A3C I;  2VUM I;  3CXC Z;  2JA6 I;  5C4J I;  1QVG Z;  3OW2 Z;  1VQ7 1;  1QYP A;  3CCR 1;  1VQK Z;  1RO4 A;  3MZK B;  2JS4 A;  4A3D I;  1JJ2 Z;  3KIH A;  3HOY I;  4MRI A;  3PO3 I;  1Y1V I;  2K5R A;  3HOU I;  1YJ9 1;  4A3G I;  2JUB A;  2R92 I;  1TFI A;  4E2X A;  2P28 A;  3VMI A;  2RPR A;  3CCL Z;  3HOX I;  2OZK A;  1X3W A;  2YAD A;  3CMA Z;  1WCM I;  3GTM I;  5C4X I;  3CC7 Z;  1YIJ Z;  2OTJ Z;  2QLV B;  3G71 1;  3CQZ I;  4A3L I;  3I56 Z;  3CCS Z;  3PO2 I;  4BXX I;  4BBR I;  1VQ8 Z;  5C44 I;  2DE5 A;  1VQL 1;  1TWH I;  2NVX I;  3GTO I;  2R6M A;  1K9M 1;  1Q82 2;  3NH5 A;  1YI2 Z;  1Y1W I;  3S2H I;  2IZ4 A;  1YJN Z;  3CCV 1;  3RZD I;  3H0G I;  2GTI A;  2LFU A;  3HOW I;  1QVF Z;  1Q7Y 2;  1RNI A;  3F3P C;  2E2J I;  4Y52 I;  2QA4 1;  1NP6 A;  3S1R I;  2R93 I;  2DE7 A;  1K73 1;  2LIY A;  1KQS Z;  1M1K 1;  4E2Y A;  3HOV I;  2QKD A;  3S17 I;  1QVG Y;  3OW2 Y;  2M48 A;  2K3R A;  3CCU Z;  1Y1V S;  2VF1 A;  1JJ2 Y;  4A3J I;  3IF8 A;  4NB8 A;  5FLX f;  1Q81 1;  2B63 I;  4A3I I;  1ZH1 A;  1K8A 2;  2DE6 A;  3CCJ Z;  2W03 A;  4DK1 A;  4RVH A;  3S14 I;  4E33 A;  1S72 1;  2PM9 A;  2JR6 A;  3G6E Z;  3G4S Z;  1VQM 1;  4QTU A;  2O4H A;  5T64 A;  1VQO 1;  3S16 I;  1QF8 A;  5IT9 b;  2ZAE B;  2VUG A;  4NBA A;  1P9N A;  2PMZ A;  3CPW Z;  1WW9 A;  1M90 1;  1NJI 1;  3J81 f;  4E2W A;  1QVF Y;  3D9X A;  4NOZ A;  2EGT A;  2E2H I;  4MD7 A;  2J6A A;  3IX0 A;  3S1N I;  2PK7 A;  2F4O A;  1KQS Y;  1W2B Z;  3J7A 4;  3TDH B;  1TWF I;  3CC2 Z;  1LQL A;  1YIT 1;  1WII A;  4DQY B;  2AKL A;  5CM2 M;  1USP A;  4S1T A;  1YUA A;  4XX2 A;  4EWC A;  1N8R 2;  2I3C A;  4MD8 A;  1YUK A;  2JMO A;  3CC4 1;  5FLX b;  4A93 I;  1KD1 2;  2OTL Z;  3VMG A;  2RIQ A;  2QRE B;  4NBE A;  3CC7 1;  5IT9 f;  1YIJ 1;  3S1Q I;  2OTJ 1;  4QTT A;  2JNY A;  3NDI A;  1YHQ Z;  4RV9 A;  1X0T A;  1VQ7 Z;  1L1O C;  1VQ4 1;  3CCR Z;  1ML8 A;  1R9T I;  1VQ5 Z;  2G2K A;  4E32 A;  4NFR A;  2F4M A;  3CPW Y;  1VQN 1;  4X6A I;  2P3Y A;  1VLA A;  3GTG I;  5T67 A;  3EED A;  4NBC A;  4AYB A;  3IFU A;  3RZO I;  3FQM A;  3J81 b;  3CCU 1;  1W2B Y;  3VTN A;  2QRC B;  1Z01 A;  3ESW A;  3FKI I;  2KI7 B;  3CCQ Z;  2R7Z I;  3G71 Z;  3VB9 A;  2V8J A;  3NFZ A;  3CCE Z;  2RT9 A;  1VQL Z;  1K8A 1;  1KRL A;  3VMH A;  3G6E 1;  3CCV Z;  1RLY A;  3I07 A;  3CME 1;  3EER A;  1KC8 1;  3JAM f;  3GTJ I;  3MON A;  2QA4 Z;  1VQP 1;  4A3K I;  4E30 A;  1DL6 A;  1K83 I;  2WB1 A;  1X3Z A;  1Q86 1;  3CD6 Z;  1USP B;  2O53 A;  2HF1 A;  4RVF A;  4NBD A;  4MXU A;  1YJW Z;  4NBF A;  1I3Q I;  2H85 A;  3GCF A;  1SFO I;  3GTL I;  3MZL B;  2QEX Z;  1Q81 2;  1VQ9 Z;  2WAQ A;  4E31 A;  1S7M A;  3NH4 A;  4RS4 A;  5T6B A;  3I55 Z;  4NH1 C;  1S72 Z;  3CC2 1;  4HH4 A;  1VQM Z;  1VQK 1;  2V8I A;  3HKZ A;  3KIF A;  1VQ6 Z;  2V8K A;  3P5J B;  3HOZ I;  1N2F A;  4NBB A;  3J80 f;  1NUI A;  1RO2 A;  4MH4 A;  2RHB A;  1RQF A;  5D1P A;  4A3M I;  4Y7N I;  2OTL 1;  4TNU A;  4NBH A;  1M90 2;  3CCL 1;  1NJI 2;  2HU9 A;  5LL6 f;  1YHQ 1;  3U50 C;  3CMA 1;  3CCM Z;  2Q51 A;  3QWU A;  2GTH A;  3I56 1;  2Q4Z A;  3CCS 1;  1VQ5 1;  1VQ8 1;  3S2D I;  3JAM b;  4BY7 I;  1TWG I;  1I50 I;  5A2Q f;  1YIT Z;  1Q82 1;  2BJO A;  1YI2 1;  5D1O B;  2Y0S A;  1YJN 1;  4DGL A;  3BG1 B;  2QRD B;  1Q7Y 1;  4BY1 I;  2JA7 I;  1PFT A;  1YJ9 Z;  3CC4 Z;  4HGY A;  3CCQ 1;  2NVY I;  5C3E I;  3CCE 1;  3BG0 B;  3NH8 A;  1VQ4 Z;  2YU9 I;  4A3F I;  5IP7 I;  4BBS I;  3D6W A;  3CCJ 1;  3FQQ A;  1K9M 2;  3J80 b;  1VQN Z;  5D1O A;  3I4M I;  3G4S 1;  4NB9 A;  5FLM I;  3F3F C;  3CD6 1;  3CXC Y;  1YJW 1;  4MON A;  5IP9 I;  1ZB8 A;  1K73 2;  3K7A I;  2JA5 I;  3PO3 S;  2GU2 A;  3GKQ A;  2KPI A;  1M1K 2;  3GTP I;  3M3Y I;  4A3B I;  2QEX 1;  1RO0 A;  3T4N B;  1VQ9 1;  3Q87 A;  3I4N I;  5A2Q b;  3H3V J;  2NVQ I;  3I55 1;  1ZB9 A;  1TWC I;  3GTM S;  2E2I I;  4HGZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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