3S2HI

Rna polymerase ii initiation complex with a 6-nt rna containing a 2[prime]-iodo atp
Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
EMPTYS2 (12-18)S1 (6-7)TIV1 (8-11)TI1 (7-10)TI2 (20-23)S3 (25-29)S4 (35-37)TIV5 (51-54)TVIII1 (47-50)TI4 (59-62)TIV6 (55-58)TIV10 (103-106)3H1 (62-64)TI5 (65-68)S5 (83-87)TIV7 (75-78)TIV8 (76-79)S6 (99-103)TIV9 (92-95)O1 (90-92)S7 (109-111)TIV11 (104-107)TIV12 (113-116)TIV2 (19-22)TIV3 (29-32)Updating...
connected with : NaN
molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 15
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2011-05-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s2hI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3s2hI02
1PFTA 3S1QI 2DE5A 1TWHI 4NBBA 3GCFA 4A3II 2BJOA 2VUMI 2R93I 2P3YA 4NBGA 4A93I 1DL6A 4A3MI 4A3KI 1ZB9A 2AKLA 1RO4A 2JNYA 2K5RA 1RLYA 4NBHA 4A3JI 3M4OI 4NBDA 4A3GI 2DE7A 3S15I 3H3VJ 2R92I 5C4JI 1WW9A 3EERA 3PO2I 2F4OA 4BY7I 4BBRI 4NBAA 2RBLA 5C4XI 1USPA 3HOWI 4A3CI 5FLMI 2NVXI 3GTPI 3GTLI 2DE6A 2J6AA 4MH4A 1X3ZA 4A3LI 5C3EI 3K7AI 2JA7I 2JR6A 2YU9I 4QTUA 3GTMS 3Q87A 3GTOI 3I07A 4NBFA 3I4MI 2JA6I 3GTGI 3S1RI 1I3QI 4NB8A 1Y1VS 5IP7I 4BBSI 3PO3I 1N2FA 4A3DI 3HOYI 3S1MI 2JA5I 3VMGA 3GTKI 3RZDI 1ML8A 4NBEA 3S2HI 3ESWA 3CQZI 3GTJI 4NOZA 3U50C 1I6HI 3H0GI 3VMHA 4Y52I 4Y7NI 4BXXI 5CM2M 5C44I 3HOZI 4A3EI 4A3FI 2NVYI 3S14I 4X6AI 5IP9I 1WCMI 3I4NI 1Y1WI 2JS4A 1TWGI 3D6WA 3S1NI 1TFIA 1L1OC 1USPB 2E2HI 3S2DI 2F4MA 3S17I 2JA8I 1Y1VI 4NB9A 1QYPA 3GKQA 2E2II 1K83I 1X3WA 2E2JI 2KPIA 2R7ZI 3HOXI 1LQLA 1R9TI 1TWAI 4NBCA 3LUSA 4QTTA 1YUAA 4A3BI 4XX2A 1TWCI 3VB9A 2NVQI 3HOUI 1SFOI 3S16I 3GTQI 1I50I 2B63I 3PO3S 3M3YI 1NUIA 1VLAA 3VMIA 3RZOI 3FKII 2NVTI 3GTMI 1ZB8A 2HF1A 2PK7A 3HOVI 4BY1I 1TWFI
chains in the Genus database with same CATH superfamily
4E2YA 3CCU1 1VQPZ 2BJOA 2P3YA 1YHQZ 4A93I 3OW2Y 3NH8A 1RLYA 4A3JI 3KIFA 3QWUA 2DE7A 4MD9A 4TNUA 3MONA 2OOYB 3JAMf 1VQ81 1QVGZ 2I3CA 2F4OA 1NP6A 2QA4Z 3CC21 4BBRI 1USPA 3HOWI 1YUKA 4RVDA 2NVXI 2EGTA 1X0TA 2M6NA 1Q822 1YIT1 1VQ9Z 5FLXf 3GTOI 3I07A 1Q821 4NBFA 3I4MI 3S1RI 3VTNA 5LL6f 3CCV1 2R6MA 1I3QI 3MZKB 1Y1VS 2QREB 5IP7I 4A3DI 2OZKA 3HOYI 3VMGA 3GTKI 3RZDI 3CD6Z 2JIMA 3FQMA 3ESWA 3CQZI 3U50C 3CCM1 3CCQZ 1YJNZ 5C44I 4CL1A 1K8A1 2V8KA 1SIWA 2IZ3A 2NVYI 3F3FC 1VQP1 5T67A 4X6AI 1YHQ1 4E33A 1YJ91 1TFIA 1L1OC 1USPB 3S2DI 1RO0A 2JIQA 1Q7Y2 1S72Z 1K83I 2E2JI 2QR1B 2R7ZI 3JAMb 1NJI2 1R9TI 1Q7Y1 4XX2A 2LIYA 2IV2X 2AYDA 3S16I 3CMAZ 3PO3S 1VQMZ 1K9M2 2RIQA 3FKII 3CXCZ 1K9M1 3I56Z 5FLXb 1VQ91 4MONA 2PMZA 3TDHB 2G2KA 1KD12 4BY1I 5IT9f 3CMEZ 1KD11 1TWHI 3CCEZ 2R93I 3CXCY 4NBGA 1YIJZ 2JIRA 4HGYA 1Q862 4A3KI 2VUGA 2AKLA 1RO4A 2JNYA 1Q861 3CD61 3G4SZ 1VQLZ 1VQ5Z 3S15I 2M48A 3HKZA 3J7A4 2O4HA 1YJN1 1RQFA 5D1PA 3BG1B 1VQK1 3J81b 3OW2Z 1VQ4Z 4NBAA 3BG0B 2RBLA 5C4XI 2KI7B 4RVFA 3GTPI 2VF1A 4MH4A 5C3EI 1M1K2 3GTMS 2PM9A 3D2LA 3Q87A 1S721 1M1K1 1YJWZ 3CPWZ 1WZNA 3CCL1 2JA6I 2GU2A 1W2BZ 2E9HA 3PO3I 5AN9F 2IZ4A 1ML8A 1VQM1 3CPWY 4MRIA 1P9NA 2Y0SA 3S2HI 3CCJZ 3I55Z 3I561 1W2BY 4Y52I 5CM2M 3HOZI 4A3FI 3F3PC 3NH5A 3G711 1M902 1WCMI 3I4NI 1Q812 2JS4A 1TWGI 2ZAEB 1M901 4MD8A 1Q811 5A2Qf 3G4S1 1VQL1 1VQ51 2GTHA 1QYPA 3GKQA 1X3WA 3MZLB 2KPIA 1LQLA 1TWAI 4NBCA 4A3BI 3IR7A 1TWCI 1VQ41 2NVQI 4E31A 3GTQI 2Q51A 1NUIA 3RZOI 3GTMI 2VPYA 1ZB8A 2PK7A 3HOVI 3G6EZ 2W03A 2V3VA 1PFTA 2P28A 2DE5A 4AYBA 3GCFA 1FDOA 3FQQA 1DL6A 3CCRZ 2QA41 3CC7Z 1NJI1 3M4OI 1KC82 1VQNZ 4A3GI 1S7MA 3I551 2R92I 1KC81 1JJ2Z 5C4JI 1WW9A 3EERA 3CCSZ 3PO2I 2OOXB 2OTLZ 1YI2Z 4A3CI 3IX0A 2V8JA 3GTLI 1QVFZ 2J6AA 1JJ2Y 1X3ZA 5A2Qb 3K7AI 2JA7I 3NDJA 2JR6A 2QRDB 3CC2Z 2HU9A 1AA6A 3GTGI 1Y8CA 4NB8A 3CCQ1 1KQSY 1QVFY 2VPZA 4HGZA 1N2FA 3NH4A 3IF8A 3S1MI 4DGLA 1YITZ 4DQYB 2JIOA 4NBEA 1ZH1A 3GTJI 1I6HI 4RVHA 3H0GI 4Y7NI 4BXXI 4A3EI 2QLVB 2YADA 3T4NB 3S14I 2WAQA 1WJ2A 5IP9I 5D1OA 1Y1WI 4EWCA 3D6WA 3CCR1 3CC71 2E2HI 2F4MA 3CMA1 1VQN1 3S17I 2JA8I 2E2II 3J80f 3CCS1 4QTTA 1N8R2 4E2XA 3KIHA 3VB9A 2OTL1 1YI21 1YJ9Z 1N8R1 4NH1C 5IT9b 3M3YI 2NAPA 3CME1 1VLAA 2QEXZ 3CCE1 2NVTI 1YIJ1 2Q4ZA 4S1TA 2HF1A 3P5JB 2RT9A 1K732 4MD7A 3S1QI 4RVGA 4NBBA 1K731 2GTIA 2RHBA 4E2WA 4A3II 1WIIA 2VUMI 4RV9A 1QVGY 1KRLA 4A3MI 2W04A 1ZB9A 2K5RA 4NBHA 5D1OB 1QXFA 4NBDA 3H3VJ 2OTJZ 1Z02A 1Z01A 2VPWA 4BY7I 3D9XA 1YJW1 4DK1A 4E30A 3CC4Z 1VQOZ 2JIPA 1RO2A 5FLMI 2RPRA 4HH4A 2DE6A 2VPXA 1K8A2 4A3LI 5T6BA 1VQKZ 1VQ6Z 2YU9I 4QTUA 3J81f 4MXUA 3J80b 1VQ7Z 3CCJ1 3CCUZ 4BBSI 1FDIA 2JA5I 4NFRA 2LEXA 2QEX1 3CCLZ 3IFUA 2E7ZA 4NOZA 1KQSZ 3VMHA 1VQ8Z 1Q16A 2JMOA 4RS4A 2K3RA 2JUBA 2V45A 1RNIA 3S1NI 4E32A 1Y1VI 4NB9A 2QRCB 2OTJ1 2WB1A 3TE5B 1JWHC 3G71Z 3HOXI 1Z03A 3LUSA 1YUAA 3CCVZ 1QF8A 3HOUI 2H85A 1SFOI 3CC41 3G6E1 1VQO1 1I50I 2B63I 2QKDA 3VMIA 3NDIA 2V8IA 2O53A 2LFUA 1VQ61 3NFZA 3EEDA 4E2ZA 3CCMZ 5T64A 1VQ71 1TWFI
chains in the Genus database with same CATH topology
4E2YA 3CCU1 1VQPZ 2BJOA 2P3YA 1YHQZ 4A93I 3OW2Y 3NH8A 1RLYA 4A3JI 3KIFA 3QWUA 2DE7A 4MD9A 4TNUA 3MONA 2OOYB 3JAMf 1VQ81 1QVGZ 2I3CA 2F4OA 1NP6A 2QA4Z 3CC21 4BBRI 1USPA 3HOWI 1YUKA 4RVDA 2NVXI 2EGTA 1X0TA 2M6NA 1Q822 1YIT1 1VQ9Z 5FLXf 3GTOI 3I07A 1Q821 4NBFA 3I4MI 3S1RI 3VTNA 5LL6f 3CCV1 2R6MA 1I3QI 3MZKB 1Y1VS 2QREB 5IP7I 4A3DI 2OZKA 3HOYI 3VMGA 3GTKI 3RZDI 3CD6Z 3FQMA 3ESWA 3CQZI 3U50C 3CCM1 3CCQZ 1YJNZ 5C44I 4CL1A 1K8A1 2V8KA 2IZ3A 2NVYI 3F3FC 1VQP1 5T67A 4X6AI 1YHQ1 4E33A 1YJ91 1TFIA 1L1OC 1USPB 3S2DI 1RO0A 1Q7Y2 1S72Z 1K83I 2E2JI 2QR1B 2R7ZI 3JAMb 1NJI2 1R9TI 1Q7Y1 4XX2A 2LIYA 3S16I 3CMAZ 3PO3S 1VQMZ 1K9M2 2RIQA 3FKII 3CXCZ 1K9M1 3I56Z 5FLXb 1VQ91 4MONA 2PMZA 3TDHB 2G2KA 1KD12 4BY1I 5IT9f 3CMEZ 1KD11 1TWHI 3CCEZ 2R93I 3CXCY 4NBGA 1YIJZ 4HGYA 1Q862 4A3KI 2VUGA 2AKLA 1RO4A 2JNYA 1Q861 3CD61 3G4SZ 1VQLZ 1VQ5Z 3S15I 2M48A 3HKZA 3J7A4 2O4HA 1YJN1 1RQFA 5D1PA 3BG1B 1VQK1 3J81b 3OW2Z 1VQ4Z 4NBAA 3BG0B 2RBLA 5C4XI 2KI7B 4RVFA 3GTPI 2VF1A 4MH4A 5C3EI 1M1K2 3GTMS 2PM9A 3Q87A 1S721 1M1K1 1YJWZ 3CPWZ 3CCL1 2JA6I 2GU2A 1W2BZ 2E9HA 3PO3I 5AN9F 2IZ4A 1ML8A 1VQM1 3CPWY 4MRIA 1P9NA 2Y0SA 3S2HI 3CCJZ 3I55Z 3I561 1W2BY 4Y52I 5CM2M 3HOZI 4A3FI 3F3PC 3NH5A 3G711 1M902 1WCMI 3I4NI 1Q812 2JS4A 1TWGI 2ZAEB 1M901 4MD8A 1Q811 5A2Qf 3G4S1 1VQL1 1VQ51 2GTHA 1QYPA 3GKQA 1X3WA 3MZLB 2KPIA 1LQLA 1TWAI 4NBCA 4A3BI 1TWCI 1VQ41 2NVQI 4E31A 3GTQI 2Q51A 1NUIA 3RZOI 3GTMI 1ZB8A 2PK7A 3HOVI 3G6EZ 2W03A 1PFTA 2P28A 2DE5A 4AYBA 3GCFA 3FQQA 1DL6A 3CCRZ 2QA41 3CC7Z 1NJI1 3M4OI 1KC82 1VQNZ 4A3GI 1S7MA 3I551 2R92I 1KC81 1JJ2Z 5C4JI 1WW9A 3EERA 3CCSZ 3PO2I 2OOXB 2OTLZ 1YI2Z 4A3CI 3IX0A 2V8JA 3GTLI 1QVFZ 2J6AA 1JJ2Y 1X3ZA 5A2Qb 3K7AI 2JA7I 3NDJA 2JR6A 2QRDB 3CC2Z 2HU9A 3GTGI 4NB8A 3CCQ1 1KQSY 1QVFY 4HGZA 1N2FA 3NH4A 3IF8A 3S1MI 4DGLA 1YITZ 4DQYB 4NBEA 1ZH1A 3GTJI 1I6HI 4RVHA 3H0GI 4Y7NI 4BXXI 4A3EI 2QLVB 2YADA 3T4NB 3S14I 2WAQA 5IP9I 5D1OA 1Y1WI 4EWCA 3D6WA 3CCR1 3CC71 2E2HI 2F4MA 3CMA1 1VQN1 3S17I 2JA8I 2E2II 3J80f 3CCS1 4QTTA 1N8R2 4E2XA 3KIHA 3VB9A 2OTL1 1YI21 1YJ9Z 1N8R1 4NH1C 5IT9b 3M3YI 3CME1 1VLAA 2QEXZ 3CCE1 2NVTI 1YIJ1 2Q4ZA 4S1TA 2HF1A 3P5JB 2RT9A 1K732 4MD7A 3S1QI 4RVGA 4NBBA 1K731 2GTIA 2RHBA 4E2WA 4A3II 1WIIA 2VUMI 4RV9A 1QVGY 1KRLA 4A3MI 2W04A 1ZB9A 2K5RA 4NBHA 5D1OB 4NBDA 3H3VJ 2OTJZ 1Z02A 1Z01A 4BY7I 3D9XA 1YJW1 4DK1A 4E30A 3CC4Z 1VQOZ 1RO2A 5FLMI 2RPRA 4HH4A 2DE6A 1K8A2 4A3LI 5T6BA 1VQKZ 1VQ6Z 2YU9I 4QTUA 3J81f 4MXUA 3J80b 1VQ7Z 3CCJ1 3CCUZ 4BBSI 2JA5I 4NFRA 2QEX1 3CCLZ 3IFUA 4NOZA 1KQSZ 3VMHA 1VQ8Z 2JMOA 4RS4A 2K3RA 2JUBA 1RNIA 3S1NI 4E32A 1Y1VI 4NB9A 2QRCB 2OTJ1 2WB1A 3TE5B 1JWHC 3G71Z 3HOXI 1Z03A 3LUSA 1YUAA 3CCVZ 1QF8A 3HOUI 2H85A 1SFOI 3CC41 3G6E1 1VQO1 1I50I 2B63I 2QKDA 3VMIA 3NDIA 2V8IA 2O53A 2LFUA 1VQ61 3NFZA 3EEDA 4E2ZA 3CCMZ 5T64A 1VQ71 1TWFI
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1PFT A;  3S1Q I;  2DE5 A;  1TWH I;  4NBB A;  3GCF A;  4A3I I;  2BJO A;  2VUM I;  2R93 I;  2P3Y A;  4NBG A;  4A93 I;  1DL6 A;  4A3M I;  4A3K I;  1ZB9 A;  2AKL A;  1RO4 A;  2JNY A;  2K5R A;  1RLY A;  4NBH A;  4A3J I;  3M4O I;  4NBD A;  4A3G I;  2DE7 A;  3S15 I;  3H3V J;  2R92 I;  5C4J I;  1WW9 A;  3EER A;  3PO2 I;  2F4O A;  4BY7 I;  4BBR I;  4NBA A;  2RBL A;  5C4X I;  1USP A;  3HOW I;  4A3C I;  5FLM I;  2NVX I;  3GTP I;  3GTL I;  2DE6 A;  2J6A A;  4MH4 A;  1X3Z A;  4A3L I;  5C3E I;  3K7A I;  2JA7 I;  2JR6 A;  2YU9 I;  4QTU A;  3GTM S;  3Q87 A;  3GTO I;  3I07 A;  4NBF A;  3I4M I;  2JA6 I;  3GTG I;  3S1R I;  1I3Q I;  4NB8 A;  1Y1V S;  5IP7 I;  4BBS I;  3PO3 I;  1N2F A;  4A3D I;  3HOY I;  3S1M I;  2JA5 I;  3VMG A;  3GTK I;  3RZD I;  1ML8 A;  4NBE A;  3S2H I;  3ESW A;  3CQZ I;  3GTJ I;  4NOZ A;  3U50 C;  1I6H I;  3H0G I;  3VMH A;  4Y52 I;  4Y7N I;  4BXX I;  5CM2 M;  5C44 I;  3HOZ I;  4A3E I;  4A3F I;  2NVY I;  3S14 I;  4X6A I;  5IP9 I;  1WCM I;  3I4N I;  1Y1W I;  2JS4 A;  1TWG I;  3D6W A;  3S1N I;  1TFI A;  1L1O C;  1USP B;  2E2H I;  3S2D I;  2F4M A;  3S17 I;  2JA8 I;  1Y1V I;  4NB9 A;  1QYP A;  3GKQ A;  2E2I I;  1K83 I;  1X3W A;  2E2J I;  2KPI A;  2R7Z I;  3HOX I;  1LQL A;  1R9T I;  1TWA I;  4NBC A;  3LUS A;  4QTT A;  1YUA A;  4A3B I;  4XX2 A;  1TWC I;  3VB9 A;  2NVQ I;  3HOU I;  1SFO I;  3S16 I;  3GTQ I;  1I50 I;  2B63 I;  3PO3 S;  3M3Y I;  1NUI A;  1VLA A;  3VMI A;  3RZO I;  3FKI I;  2NVT I;  3GTM I;  1ZB8 A;  2HF1 A;  2PK7 A;  3HOV I;  4BY1 I;  1TWF I; 
#chains in the Genus database with same CATH topology
 4E2Y A;  3CCU 1;  1VQP Z;  2BJO A;  2P3Y A;  1YHQ Z;  4A93 I;  3OW2 Y;  3NH8 A;  1RLY A;  4A3J I;  3KIF A;  3QWU A;  2DE7 A;  4MD9 A;  4TNU A;  3MON A;  2OOY B;  3JAM f;  1VQ8 1;  1QVG Z;  2I3C A;  2F4O A;  1NP6 A;  2QA4 Z;  3CC2 1;  4BBR I;  1USP A;  3HOW I;  1YUK A;  4RVD A;  2NVX I;  2EGT A;  1X0T A;  2M6N A;  1Q82 2;  1YIT 1;  1VQ9 Z;  5FLX f;  3GTO I;  3I07 A;  1Q82 1;  4NBF A;  3I4M I;  3S1R I;  3VTN A;  5LL6 f;  3CCV 1;  2R6M A;  1I3Q I;  3MZK B;  1Y1V S;  2QRE B;  5IP7 I;  4A3D I;  2OZK A;  3HOY I;  3VMG A;  3GTK I;  3RZD I;  3CD6 Z;  2JIM A;  3FQM A;  3ESW A;  3CQZ I;  3U50 C;  3CCM 1;  3CCQ Z;  1YJN Z;  5C44 I;  4CL1 A;  1K8A 1;  2V8K A;  1SIW A;  2IZ3 A;  2NVY I;  3F3F C;  1VQP 1;  5T67 A;  4X6A I;  1YHQ 1;  4E33 A;  1YJ9 1;  1TFI A;  1L1O C;  1USP B;  3S2D I;  1RO0 A;  2JIQ A;  1Q7Y 2;  1S72 Z;  1K83 I;  2E2J I;  2QR1 B;  2R7Z I;  3JAM b;  1NJI 2;  1R9T I;  1Q7Y 1;  4XX2 A;  2LIY A;  2IV2 X;  2AYD A;  3S16 I;  3CMA Z;  3PO3 S;  1VQM Z;  1K9M 2;  2RIQ A;  3FKI I;  3CXC Z;  1K9M 1;  3I56 Z;  5FLX b;  1VQ9 1;  4MON A;  2PMZ A;  3TDH B;  2G2K A;  1KD1 2;  4BY1 I;  5IT9 f;  3CME Z;  1KD1 1;  1TWH I;  3CCE Z;  2R93 I;  3CXC Y;  4NBG A;  1YIJ Z;  2JIR A;  4HGY A;  1Q86 2;  4A3K I;  2VUG A;  2AKL A;  1RO4 A;  2JNY A;  1Q86 1;  3CD6 1;  3G4S Z;  1VQL Z;  1VQ5 Z;  3S15 I;  2M48 A;  3HKZ A;  3J7A 4;  2O4H A;  1YJN 1;  1RQF A;  5D1P A;  3BG1 B;  1VQK 1;  3J81 b;  3OW2 Z;  1VQ4 Z;  4NBA A;  3BG0 B;  2RBL A;  5C4X I;  2KI7 B;  4RVF A;  3GTP I;  2VF1 A;  4MH4 A;  5C3E I;  1M1K 2;  3GTM S;  2PM9 A;  3D2L A;  3Q87 A;  1S72 1;  1M1K 1;  1YJW Z;  3CPW Z;  1WZN A;  3CCL 1;  2JA6 I;  2GU2 A;  1W2B Z;  2E9H A;  3PO3 I;  5AN9 F;  2IZ4 A;  1ML8 A;  1VQM 1;  3CPW Y;  4MRI A;  1P9N A;  2Y0S A;  3S2H I;  3CCJ Z;  3I55 Z;  3I56 1;  1W2B Y;  4Y52 I;  5CM2 M;  3HOZ I;  4A3F I;  3F3P C;  3NH5 A;  3G71 1;  1M90 2;  1WCM I;  3I4N I;  1Q81 2;  2JS4 A;  1TWG I;  2ZAE B;  1M90 1;  4MD8 A;  1Q81 1;  5A2Q f;  3G4S 1;  1VQL 1;  1VQ5 1;  2GTH A;  1QYP A;  3GKQ A;  1X3W A;  3MZL B;  2KPI A;  1LQL A;  1TWA I;  4NBC A;  4A3B I;  3IR7 A;  1TWC I;  1VQ4 1;  2NVQ I;  4E31 A;  3GTQ I;  2Q51 A;  1NUI A;  3RZO I;  3GTM I;  2VPY A;  1ZB8 A;  2PK7 A;  3HOV I;  3G6E Z;  2W03 A;  2V3V A;  1PFT A;  2P28 A;  2DE5 A;  4AYB A;  3GCF A;  1FDO A;  3FQQ A;  1DL6 A;  3CCR Z;  2QA4 1;  3CC7 Z;  1NJI 1;  3M4O I;  1KC8 2;  1VQN Z;  4A3G I;  1S7M A;  3I55 1;  2R92 I;  1KC8 1;  1JJ2 Z;  5C4J I;  1WW9 A;  3EER A;  3CCS Z;  3PO2 I;  2OOX B;  2OTL Z;  1YI2 Z;  4A3C I;  3IX0 A;  2V8J A;  3GTL I;  1QVF Z;  2J6A A;  1JJ2 Y;  1X3Z A;  5A2Q b;  3K7A I;  2JA7 I;  3NDJ A;  2JR6 A;  2QRD B;  3CC2 Z;  2HU9 A;  1AA6 A;  3GTG I;  1Y8C A;  4NB8 A;  3CCQ 1;  1KQS Y;  1QVF Y;  2VPZ A;  4HGZ A;  1N2F A;  3NH4 A;  3IF8 A;  3S1M I;  4DGL A;  1YIT Z;  4DQY B;  2JIO A;  4NBE A;  1ZH1 A;  3GTJ I;  1I6H I;  4RVH A;  3H0G I;  4Y7N I;  4BXX I;  4A3E I;  2QLV B;  2YAD A;  3T4N B;  3S14 I;  2WAQ A;  1WJ2 A;  5IP9 I;  5D1O A;  1Y1W I;  4EWC A;  3D6W A;  3CCR 1;  3CC7 1;  2E2H I;  2F4M A;  3CMA 1;  1VQN 1;  3S17 I;  2JA8 I;  2E2I I;  3J80 f;  3CCS 1;  4QTT A;  1N8R 2;  4E2X A;  3KIH A;  3VB9 A;  2OTL 1;  1YI2 1;  1YJ9 Z;  1N8R 1;  4NH1 C;  5IT9 b;  3M3Y I;  2NAP A;  3CME 1;  1VLA A;  2QEX Z;  3CCE 1;  2NVT I;  1YIJ 1;  2Q4Z A;  4S1T A;  2HF1 A;  3P5J B;  2RT9 A;  1K73 2;  4MD7 A;  3S1Q I;  4RVG A;  4NBB A;  1K73 1;  2GTI A;  2RHB A;  4E2W A;  4A3I I;  1WII A;  2VUM I;  4RV9 A;  1QVG Y;  1KRL A;  4A3M I;  2W04 A;  1ZB9 A;  2K5R A;  4NBH A;  5D1O B;  1QXF A;  4NBD A;  3H3V J;  2OTJ Z;  1Z02 A;  1Z01 A;  2VPW A;  4BY7 I;  3D9X A;  1YJW 1;  4DK1 A;  4E30 A;  3CC4 Z;  1VQO Z;  2JIP A;  1RO2 A;  5FLM I;  2RPR A;  4HH4 A;  2DE6 A;  2VPX A;  1K8A 2;  4A3L I;  5T6B A;  1VQK Z;  1VQ6 Z;  2YU9 I;  4QTU A;  3J81 f;  4MXU A;  3J80 b;  1VQ7 Z;  3CCJ 1;  3CCU Z;  4BBS I;  1FDI A;  2JA5 I;  4NFR A;  2LEX A;  2QEX 1;  3CCL Z;  3IFU A;  2E7Z A;  4NOZ A;  1KQS Z;  3VMH A;  1VQ8 Z;  1Q16 A;  2JMO A;  4RS4 A;  2K3R A;  2JUB A;  2V45 A;  1RNI A;  3S1N I;  4E32 A;  1Y1V I;  4NB9 A;  2QRC B;  2OTJ 1;  2WB1 A;  3TE5 B;  1JWH C;  3G71 Z;  3HOX I;  1Z03 A;  3LUS A;  1YUA A;  3CCV Z;  1QF8 A;  3HOU I;  2H85 A;  1SFO I;  3CC4 1;  3G6E 1;  1VQO 1;  1I50 I;  2B63 I;  2QKD A;  3VMI A;  3NDI A;  2V8I A;  2O53 A;  2LFU A;  1VQ6 1;  3NFZ A;  3EED A;  4E2Z A;  3CCM Z;  5T64 A;  1VQ7 1;  1TWF I; 
#chains in the Genus database with same CATH homology
 4E2Y A;  3CCU 1;  1VQP Z;  2BJO A;  2P3Y A;  1YHQ Z;  4A93 I;  3OW2 Y;  3NH8 A;  1RLY A;  4A3J I;  3KIF A;  3QWU A;  2DE7 A;  4MD9 A;  4TNU A;  3MON A;  2OOY B;  3JAM f;  1VQ8 1;  1QVG Z;  2I3C A;  2F4O A;  1NP6 A;  2QA4 Z;  3CC2 1;  4BBR I;  1USP A;  3HOW I;  1YUK A;  4RVD A;  2NVX I;  2EGT A;  1X0T A;  2M6N A;  1Q82 2;  1YIT 1;  1VQ9 Z;  5FLX f;  3GTO I;  3I07 A;  1Q82 1;  4NBF A;  3I4M I;  3S1R I;  3VTN A;  5LL6 f;  3CCV 1;  2R6M A;  1I3Q I;  3MZK B;  1Y1V S;  2QRE B;  5IP7 I;  4A3D I;  2OZK A;  3HOY I;  3VMG A;  3GTK I;  3RZD I;  3CD6 Z;  3FQM A;  3ESW A;  3CQZ I;  3U50 C;  3CCM 1;  3CCQ Z;  1YJN Z;  5C44 I;  4CL1 A;  1K8A 1;  2V8K A;  2IZ3 A;  2NVY I;  3F3F C;  1VQP 1;  5T67 A;  4X6A I;  1YHQ 1;  4E33 A;  1YJ9 1;  1TFI A;  1L1O C;  1USP B;  3S2D I;  1RO0 A;  1Q7Y 2;  1S72 Z;  1K83 I;  2E2J I;  2QR1 B;  2R7Z I;  3JAM b;  1NJI 2;  1R9T I;  1Q7Y 1;  4XX2 A;  2LIY A;  3S16 I;  3CMA Z;  3PO3 S;  1VQM Z;  1K9M 2;  2RIQ A;  3FKI I;  3CXC Z;  1K9M 1;  3I56 Z;  5FLX b;  1VQ9 1;  4MON A;  2PMZ A;  3TDH B;  2G2K A;  1KD1 2;  4BY1 I;  5IT9 f;  3CME Z;  1KD1 1;  1TWH I;  3CCE Z;  2R93 I;  3CXC Y;  4NBG A;  1YIJ Z;  4HGY A;  1Q86 2;  4A3K I;  2VUG A;  2AKL A;  1RO4 A;  2JNY A;  1Q86 1;  3CD6 1;  3G4S Z;  1VQL Z;  1VQ5 Z;  3S15 I;  2M48 A;  3HKZ A;  3J7A 4;  2O4H A;  1YJN 1;  1RQF A;  5D1P A;  3BG1 B;  1VQK 1;  3J81 b;  3OW2 Z;  1VQ4 Z;  4NBA A;  3BG0 B;  2RBL A;  5C4X I;  2KI7 B;  4RVF A;  3GTP I;  2VF1 A;  4MH4 A;  5C3E I;  1M1K 2;  3GTM S;  2PM9 A;  3Q87 A;  1S72 1;  1M1K 1;  1YJW Z;  3CPW Z;  3CCL 1;  2JA6 I;  2GU2 A;  1W2B Z;  2E9H A;  3PO3 I;  5AN9 F;  2IZ4 A;  1ML8 A;  1VQM 1;  3CPW Y;  4MRI A;  1P9N A;  2Y0S A;  3S2H I;  3CCJ Z;  3I55 Z;  3I56 1;  1W2B Y;  4Y52 I;  5CM2 M;  3HOZ I;  4A3F I;  3F3P C;  3NH5 A;  3G71 1;  1M90 2;  1WCM I;  3I4N I;  1Q81 2;  2JS4 A;  1TWG I;  2ZAE B;  1M90 1;  4MD8 A;  1Q81 1;  5A2Q f;  3G4S 1;  1VQL 1;  1VQ5 1;  2GTH A;  1QYP A;  3GKQ A;  1X3W A;  3MZL B;  2KPI A;  1LQL A;  1TWA I;  4NBC A;  4A3B I;  1TWC I;  1VQ4 1;  2NVQ I;  4E31 A;  3GTQ I;  2Q51 A;  1NUI A;  3RZO I;  3GTM I;  1ZB8 A;  2PK7 A;  3HOV I;  3G6E Z;  2W03 A;  1PFT A;  2P28 A;  2DE5 A;  4AYB A;  3GCF A;  3FQQ A;  1DL6 A;  3CCR Z;  2QA4 1;  3CC7 Z;  1NJI 1;  3M4O I;  1KC8 2;  1VQN Z;  4A3G I;  1S7M A;  3I55 1;  2R92 I;  1KC8 1;  1JJ2 Z;  5C4J I;  1WW9 A;  3EER A;  3CCS Z;  3PO2 I;  2OOX B;  2OTL Z;  1YI2 Z;  4A3C I;  3IX0 A;  2V8J A;  3GTL I;  1QVF Z;  2J6A A;  1JJ2 Y;  1X3Z A;  5A2Q b;  3K7A I;  2JA7 I;  3NDJ A;  2JR6 A;  2QRD B;  3CC2 Z;  2HU9 A;  3GTG I;  4NB8 A;  3CCQ 1;  1KQS Y;  1QVF Y;  4HGZ A;  1N2F A;  3NH4 A;  3IF8 A;  3S1M I;  4DGL A;  1YIT Z;  4DQY B;  4NBE A;  1ZH1 A;  3GTJ I;  1I6H I;  4RVH A;  3H0G I;  4Y7N I;  4BXX I;  4A3E I;  2QLV B;  2YAD A;  3T4N B;  3S14 I;  2WAQ A;  5IP9 I;  5D1O A;  1Y1W I;  4EWC A;  3D6W A;  3CCR 1;  3CC7 1;  2E2H I;  2F4M A;  3CMA 1;  1VQN 1;  3S17 I;  2JA8 I;  2E2I I;  3J80 f;  3CCS 1;  4QTT A;  1N8R 2;  4E2X A;  3KIH A;  3VB9 A;  2OTL 1;  1YI2 1;  1YJ9 Z;  1N8R 1;  4NH1 C;  5IT9 b;  3M3Y I;  3CME 1;  1VLA A;  2QEX Z;  3CCE 1;  2NVT I;  1YIJ 1;  2Q4Z A;  4S1T A;  2HF1 A;  3P5J B;  2RT9 A;  1K73 2;  4MD7 A;  3S1Q I;  4RVG A;  4NBB A;  1K73 1;  2GTI A;  2RHB A;  4E2W A;  4A3I I;  1WII A;  2VUM I;  4RV9 A;  1QVG Y;  1KRL A;  4A3M I;  2W04 A;  1ZB9 A;  2K5R A;  4NBH A;  5D1O B;  4NBD A;  3H3V J;  2OTJ Z;  1Z02 A;  1Z01 A;  4BY7 I;  3D9X A;  1YJW 1;  4DK1 A;  4E30 A;  3CC4 Z;  1VQO Z;  1RO2 A;  5FLM I;  2RPR A;  4HH4 A;  2DE6 A;  1K8A 2;  4A3L I;  5T6B A;  1VQK Z;  1VQ6 Z;  2YU9 I;  4QTU A;  3J81 f;  4MXU A;  3J80 b;  1VQ7 Z;  3CCJ 1;  3CCU Z;  4BBS I;  2JA5 I;  4NFR A;  2QEX 1;  3CCL Z;  3IFU A;  4NOZ A;  1KQS Z;  3VMH A;  1VQ8 Z;  2JMO A;  4RS4 A;  2K3R A;  2JUB A;  1RNI A;  3S1N I;  4E32 A;  1Y1V I;  4NB9 A;  2QRC B;  2OTJ 1;  2WB1 A;  3TE5 B;  1JWH C;  3G71 Z;  3HOX I;  1Z03 A;  3LUS A;  1YUA A;  3CCV Z;  1QF8 A;  3HOU I;  2H85 A;  1SFO I;  3CC4 1;  3G6E 1;  1VQO 1;  1I50 I;  2B63 I;  2QKD A;  3VMI A;  3NDI A;  2V8I A;  2O53 A;  2LFU A;  1VQ6 1;  3NFZ A;  3EED A;  4E2Z A;  3CCM Z;  5T64 A;  1VQ7 1;  1TWF I;
1I50I 1I6HI 1K83I 1NIKI 1R5UI 1R9SI 1R9TI 1NT9I 1PQVI
similar chains in the Genus database (40% sequence similarity)
None
similar chains in the pdb database (40% sequence similarity)

  
#similar chains in the Genus database (40% sequence similarity)
1I50 I; 1I6H I; 1K83 I; 1NIK I; 1R5U I; 1R9S I; 1R9T I; 
#similar chains, but unknotted
1PQV I; 
#similar chains in the pdb database (40% sequence similarity)
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