3H3VJ

Yeast rnap ii containing poly(a)-signal sequence in the active site
Total Genus 7

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
119
structure length
119
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TIV1 (7-10)TIV2 (8-11)TIV3 (29-32)EMPTYS2 (24-28)S1 (15-19)TI1 (19-22)TI2 (20-23)S3 (35-37)TIV4 (30-33)TIV5 (38-41)TIV6 (47-50)O1 (90-92)TII1 (51-54)TIV7 (53-56)TIV13 (103-106)TIV8 (59-62)TIV9 (60-63)TI3 (61-64)S5 (83-86)TI4 (65-68)S4 (70-71)TIV11 (75-78)TIV12 (76-79)S6 (100-103)TI5 (92-95)S7 (109-111)TIV15 (113-116)Updating...
connected with : NaN
molecule tags Transferase/dna/rna
publication title Torpedo Nuclease Rat1 Is Insufficient to Terminate RNA Polymerase II in Vitro
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 7
structure length 119
sequence length 119
ec nomenclature
pdb deposition date 2009-04-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
J PF01096 TFIIS_C Transcription factor S-II (TFIIS)
J PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3h3vJ01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 3h3vJ02
3RZDI 3HOXI 1SFOI 1NUIA 3GTPI 2R7ZI 3S15I 1I50I 5C4XI 3RZOI 1L1OC 3VMGA 1TWFI 3S16I 1YUAA 4NBEA 4NBCA 4A93I 4NB9A 2DE5A 1RLYA 1K83I 2J6AA 3GTGI 4XX2A 4A3KI 4NBDA 3S1MI 4BBSI 1WCMI 3FKII 2E2JI 3HOZI 3I4MI 1R9TI 1TWAI 3GTKI 1ZB9A 4NBBA 1TWCI 1USPB 4NBGA 2HF1A 4NBAA 3I07A 4A3BI 1LQLA 4Y52I 2NVYI 1I6HI 3S2DI 1ZB8A 1N2FA 3M4OI 1TFIA 3GTQI 4X6AI 5C3EI 1Y1WI 2B63I 2DE6A 3HOVI 3S2HI 5IP9I 1X3WA 2BJOA 2P3YA 4NBHA 1ML8A 2NVQI 3EERA 1RO4A 1TWHI 1VLAA 3LUSA 4BY7I 3D6WA 3GCFA 2VUMI 3S14I 3M3YI 5C4JI 4A3JI 4QTUA 2NVXI 3GKQA 3VMIA 3VMHA 2F4OA 3S1NI 4A3CI 4BBRI 3ESWA 4A3GI 2RBLA 2JA7I 2NVTI 5C44I 3I4NI 5CM2M 2F4MA 2R93I 1Y1VI 1Y1VS 4NOZA 2PK7A 1USPA 4A3FI 2E2HI 3Q87A 4A3II 2E2II 2YU9I 2JR6A 3HOYI 3S17I 2AKLA 3S1RI 3HOUI 3GTMI 3GTMS 1X3ZA 3HOWI 2K5RA 2R92I 4BXXI 2JA6I 2JS4A 3PO2I 4BY1I 4Y7NI 4A3DI 3U50C 3VB9A 5FLMI 3H3VJ 1DL6A 5IP7I 3CQZI 1WW9A 3GTJI 4A3MI 3GTOI 3H0GI 4QTTA 3S1QI 2DE7A 2JA8I 1QYPA 2KPIA 3GTLI 1I3QI 4MH4A 1TWGI 3PO3I 3PO3S 2JA5I 4A3LI 4NB8A 2JNYA 4NBFA 1PFTA 3K7AI 4A3EI
chains in the Genus database with same CATH superfamily
3S15I 2AYDA 1YITZ 1YI21 1L1OC 3CCUZ 1VQOZ 3VMGA 1TWFI 1Y8CA 1K731 3CCR1 2DE5A 1K83I 2J6AA 1Q862 3G4S1 4XX2A 3J81b 2W04A 4BBSI 2JUBA 5T64A 1KRLA 3I4MI 1M1K2 4NFRA 1ZB9A 1N8R2 2HF1A 4NBAA 3I07A 1LQLA 2NVYI 3S2DI 2QLVB 5C3EI 2GTIA 1Y1WI 3CCVZ 3CCMZ 4RVFA 4E2ZA 1Q7Y1 2NVQI 2VPYA 1RO4A 1Q822 3LUSA 1VQMZ 4MD9A 1YHQ1 1VQLZ 5C4JI 4QTUA 3GKQA 3VMIA 1VQ61 4A3CI 2PMZA 3ESWA 5A2Qb 2RBLA 2VPXA 1QF8A 3CC2Z 3CCS1 5CM2M 2QR1B 2R93I 1VQ41 2NAPA 1NP6A 3G6E1 4A3FI 4NH1C 4E33A 2E2HI 2JR6A 4MD8A 1RO0A 1Z01A 1KC81 3S1RI 1X3ZA 2JIQA 1K8A2 2VPWA 3CCRZ 3U50C 3VB9A 5FLMI 2YADA 2JIOA 5FLXb 1JJ2Y 1QVGY 3CD61 3G4SZ 2K3RA 1VQP1 3VTNA 3H0GI 2DE7A 4MH4A 1TWGI 3NDJA 3CCE1 3F3PC 2RT9A 3IX0A 3MZKB 3K7AI 2IZ4A 3HOXI 5D1OB 3CCL1 1VQK1 1Q861 4E2XA 1YJN1 5C4XI 5D1OA 2O4HA 4CL1A 2O53A 3CMAZ 1M1K1 1QXFA 3CPWZ 2M48A 1N8R1 2QREB 4A93I 1RLYA 3CXCZ 1YJ91 2M6NA 1YHQZ 3IF8A 4DGLA 2Y0SA 4NBDA 3S1MI 1KQSZ 1VQ6Z 1VQ81 5D1PA 3FKII 5A2Qf 3GTKI 1TWAI 1VQ9Z 1AA6A 1WJ2A 1Q821 1USPB 4NBGA 2LFUA 4A3BI 3IFUA 2JIRA 1N2FA 3G71Z 1TFIA 2QKDA 1Z02A 3HOVI 3S2HI 1X3WA 3CMEZ 1ML8A 3IR7A 1QVFY 1S7MA 3EEDA 3NH4A 1VQNZ 2V8KA 2P28A 3BG0B 2OTJ1 4E30A 4MXUA 2JA7I 2E7ZA 5C44I 3NH8A 3I4NI 3D2LA 5FLXf 3MONA 1Y1VS 3CD6Z 3T4NB 1K8A1 1YUKA 4MD7A 3Q87A 3CCEZ 3HOYI 5T6BA 2H85A 1VQKZ 3I561 1W2BZ 3GTMS 3CCJ1 1YJNZ 2VF1A 4BY1I 2V8JA 1SIWA 5IT9f 4RV9A 1VQ51 4MONA 1Z03A 1WW9A 3GTJI 3NDIA 1YJ9Z 5LL6f 3CPWY 2QEX1 3GTOI 3OW2Z 3PO3S 2KI7B 4S1TA 4NB8A 2RIQA 4A3EI 1FDIA 3GTPI 1NUIA 1YI2Z 2LIYA 2R6MA 4DK1A 1S721 2OTL1 1VQO1 4MRIA 4NBEA 4E2YA 2RHBA 4NBCA 1X0TA 4E32A 3GTGI 1M902 2Q51A 1ZH1A 1KD12 3HOZI 1RNIA 1R9TI 2QA41 2QRDB 1TWCI 1I6HI 5IP9I 5IT9b 2BJOA 2JIMA 3CCV1 4EWCA 4NBHA 3CC41 2G2KA 3I551 1VLAA 2OOXB 4BY7I 3D6WA 1Q812 3GCFA 4HGYA 3I56Z 2VUMI 3S14I 1Q16A 2HU9A 3CCJZ 3M3YI 4A3JI 2NVXI 2F4OA 1VQL1 3S1NI 4BBRI 3CCSZ 3CC71 1VQ5Z 2NVTI 2V3VA 3CC21 1VQ4Z 3G6EZ 4NOZA 1USPA 1YIJ1 2QEXZ 2Q4ZA 1RO2A 3FQMA 4RVGA 4A3II 2YU9I 1FDOA 4TNUA 2AKLA 1VQ71 3HOUI 3HOWI 2R92I 4BXXI 2JS4A 3NFZA 3PO2I 1S72Z 3MZLB 2JMOA 2OTLZ 2PM9A 1JJ2Z 4A3DI 2WAQA 1QVGZ 3H3VJ 1DL6A 5IP7I 3TE5B 2GU2A 1RQFA 1VQPZ 4HGZA 4QTTA 1QYPA 2JA5I 2IZ3A 2QA4Z 2JNYA 4NBFA 5T67A 3CCLZ 3RZDI 4RVDA 1YJW1 1SFOI 2R7ZI 1M901 1I50I 2I3CA 2VPZA 1NJI2 3RZOI 1KD11 2GTHA 1K9M2 3NH5A 3S16I 2VUGA 1YUAA 3TDHB 3J80f 3CMA1 3CC4Z 4NB9A 3I55Z 2E9HA 4RVHA 4DQYB 4A3KI 1VQ8Z 3BG1B 3CCQ1 3JAMb 3CXCY 1WCMI 3HKZA 2JIPA 2E2JI 2RPRA 1K732 4NBBA 1KQSY 3CC7Z 2OZKA 1VQ91 2LEXA 1Q811 4Y52I 1ZB8A 1YIT1 1YIJZ 3M4OI 3GTQI 4X6AI 4E2WA 3G711 2B63I 3CCU1 2QRCB 2DE6A 4RS4A 1QVFZ 2P3YA 4HH4A 3D9XA 3CME1 2OOYB 3EERA 1TWHI 1VQ7Z 1VQN1 2OTJZ 3KIFA 3VMHA 1JWHC 3J7A4 3KIHA 1Q7Y2 4A3GI 2EGTA 2ZAEB 2F4MA 3QWUA 1Y1VI 2PK7A 3J81f 4E31A 3F3FC 3CCM1 3J80b 2E2II 2V45A 3S17I 1VQM1 1YJWZ 3GTMI 1WZNA 2K5RA 2JA6I 1W2BY 1P9NA 3P5JB 4Y7NI 2IV2X 3FQQA 3CQZI 1KC82 2V8IA 2W03A 4A3MI 1NJI1 4AYBA 3S1QI 3CCQZ 3JAMf 5AN9F 2KPIA 1K9M1 2JA8I 3GTLI 1I3QI 3PO3I 4A3LI 1PFTA 3OW2Y 2WB1A 1WIIA
chains in the Genus database with same CATH topology
3S15I 1YITZ 1YI21 1L1OC 3CCUZ 1VQOZ 3VMGA 1TWFI 1K731 3CCR1 2DE5A 1K83I 2J6AA 1Q862 3G4S1 4XX2A 3J81b 2W04A 4BBSI 2JUBA 5T64A 1KRLA 3I4MI 1M1K2 4NFRA 1ZB9A 1N8R2 2HF1A 4NBAA 3I07A 1LQLA 2NVYI 3S2DI 2QLVB 5C3EI 2GTIA 1Y1WI 3CCVZ 3CCMZ 4RVFA 4E2ZA 1Q7Y1 2NVQI 1RO4A 1Q822 3LUSA 1VQMZ 4MD9A 1YHQ1 1VQLZ 5C4JI 4QTUA 3GKQA 3VMIA 1VQ61 4A3CI 2PMZA 3ESWA 5A2Qb 2RBLA 1QF8A 3CC2Z 3CCS1 5CM2M 2QR1B 2R93I 1VQ41 1NP6A 3G6E1 4A3FI 4NH1C 4E33A 2E2HI 2JR6A 4MD8A 1RO0A 1Z01A 1KC81 3S1RI 1X3ZA 1K8A2 3CCRZ 3U50C 3VB9A 5FLMI 2YADA 5FLXb 1JJ2Y 1QVGY 3CD61 3G4SZ 2K3RA 1VQP1 3VTNA 3H0GI 2DE7A 4MH4A 1TWGI 3NDJA 3CCE1 3F3PC 2RT9A 3IX0A 3MZKB 3K7AI 2IZ4A 3HOXI 5D1OB 3CCL1 1VQK1 1Q861 4E2XA 1YJN1 5C4XI 5D1OA 2O4HA 4CL1A 2O53A 3CMAZ 1M1K1 3CPWZ 2M48A 1N8R1 2QREB 4A93I 1RLYA 3CXCZ 1YJ91 2M6NA 1YHQZ 3IF8A 4DGLA 2Y0SA 4NBDA 3S1MI 1KQSZ 1VQ6Z 1VQ81 5D1PA 3FKII 5A2Qf 3GTKI 1TWAI 1VQ9Z 1Q821 1USPB 4NBGA 2LFUA 4A3BI 3IFUA 1N2FA 3G71Z 1TFIA 2QKDA 1Z02A 3HOVI 3S2HI 1X3WA 3CMEZ 1ML8A 1QVFY 1S7MA 3EEDA 3NH4A 1VQNZ 2V8KA 2P28A 3BG0B 2OTJ1 4E30A 4MXUA 2JA7I 5C44I 3NH8A 3I4NI 5FLXf 3MONA 1Y1VS 3CD6Z 3T4NB 1K8A1 1YUKA 4MD7A 3Q87A 3CCEZ 3HOYI 5T6BA 2H85A 1VQKZ 3I561 1W2BZ 3GTMS 3CCJ1 1YJNZ 2VF1A 4BY1I 2V8JA 5IT9f 4RV9A 1VQ51 4MONA 1Z03A 1WW9A 3GTJI 3NDIA 1YJ9Z 5LL6f 3CPWY 2QEX1 3GTOI 3OW2Z 3PO3S 2KI7B 4S1TA 4NB8A 2RIQA 4A3EI 3GTPI 1NUIA 1YI2Z 2LIYA 2R6MA 4DK1A 1S721 2OTL1 1VQO1 4MRIA 4NBEA 4E2YA 2RHBA 4NBCA 1X0TA 4E32A 3GTGI 1M902 2Q51A 1ZH1A 1KD12 3HOZI 1RNIA 1R9TI 2QA41 2QRDB 1TWCI 1I6HI 5IP9I 5IT9b 2BJOA 3CCV1 4EWCA 4NBHA 3CC41 2G2KA 3I551 1VLAA 2OOXB 4BY7I 3D6WA 1Q812 3GCFA 4HGYA 3I56Z 2VUMI 3S14I 2HU9A 3CCJZ 3M3YI 4A3JI 2NVXI 2F4OA 1VQL1 3S1NI 4BBRI 3CCSZ 3CC71 1VQ5Z 2NVTI 3CC21 1VQ4Z 3G6EZ 4NOZA 1USPA 1YIJ1 2QEXZ 2Q4ZA 1RO2A 3FQMA 4RVGA 4A3II 2YU9I 4TNUA 2AKLA 1VQ71 3HOUI 3HOWI 2R92I 4BXXI 2JS4A 3NFZA 3PO2I 1S72Z 3MZLB 2JMOA 2OTLZ 2PM9A 1JJ2Z 4A3DI 2WAQA 1QVGZ 3H3VJ 1DL6A 5IP7I 3TE5B 2GU2A 1RQFA 1VQPZ 4HGZA 4QTTA 1QYPA 2JA5I 2IZ3A 2QA4Z 2JNYA 4NBFA 5T67A 3CCLZ 3RZDI 4RVDA 1YJW1 1SFOI 2R7ZI 1M901 1I50I 2I3CA 1NJI2 3RZOI 1KD11 2GTHA 1K9M2 3NH5A 3S16I 2VUGA 1YUAA 3TDHB 3J80f 3CMA1 3CC4Z 4NB9A 3I55Z 2E9HA 4RVHA 4DQYB 4A3KI 1VQ8Z 3BG1B 3CCQ1 3JAMb 3CXCY 1WCMI 3HKZA 2E2JI 2RPRA 1K732 4NBBA 1KQSY 3CC7Z 2OZKA 1VQ91 1Q811 4Y52I 1ZB8A 1YIT1 1YIJZ 3M4OI 3GTQI 4X6AI 4E2WA 3G711 2B63I 3CCU1 2QRCB 2DE6A 4RS4A 1QVFZ 2P3YA 4HH4A 3D9XA 3CME1 2OOYB 3EERA 1TWHI 1VQ7Z 1VQN1 2OTJZ 3KIFA 3VMHA 1JWHC 3J7A4 3KIHA 1Q7Y2 4A3GI 2EGTA 2ZAEB 2F4MA 3QWUA 1Y1VI 2PK7A 3J81f 4E31A 3F3FC 3CCM1 3J80b 2E2II 3S17I 1VQM1 1YJWZ 3GTMI 2K5RA 2JA6I 1W2BY 1P9NA 3P5JB 4Y7NI 3FQQA 3CQZI 1KC82 2V8IA 2W03A 4A3MI 1NJI1 4AYBA 3S1QI 3CCQZ 3JAMf 5AN9F 2KPIA 1K9M1 2JA8I 3GTLI 1I3QI 3PO3I 4A3LI 1PFTA 3OW2Y 2WB1A 1WIIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RZD I;  3HOX I;  1SFO I;  1NUI A;  3GTP I;  2R7Z I;  3S15 I;  1I50 I;  5C4X I;  3RZO I;  1L1O C;  3VMG A;  1TWF I;  3S16 I;  1YUA A;  4NBE A;  4NBC A;  4A93 I;  4NB9 A;  2DE5 A;  1RLY A;  1K83 I;  2J6A A;  3GTG I;  4XX2 A;  4A3K I;  4NBD A;  3S1M I;  4BBS I;  1WCM I;  3FKI I;  2E2J I;  3HOZ I;  3I4M I;  1R9T I;  1TWA I;  3GTK I;  1ZB9 A;  4NBB A;  1TWC I;  1USP B;  4NBG A;  2HF1 A;  4NBA A;  3I07 A;  4A3B I;  1LQL A;  4Y52 I;  2NVY I;  1I6H I;  3S2D I;  1ZB8 A;  1N2F A;  3M4O I;  1TFI A;  3GTQ I;  4X6A I;  5C3E I;  1Y1W I;  2B63 I;  2DE6 A;  3HOV I;  3S2H I;  5IP9 I;  1X3W A;  2BJO A;  2P3Y A;  4NBH A;  1ML8 A;  2NVQ I;  3EER A;  1RO4 A;  1TWH I;  1VLA A;  3LUS A;  4BY7 I;  3D6W A;  3GCF A;  2VUM I;  3S14 I;  3M3Y I;  5C4J I;  4A3J I;  4QTU A;  2NVX I;  3GKQ A;  3VMI A;  3VMH A;  2F4O A;  3S1N I;  4A3C I;  4BBR I;  3ESW A;  4A3G I;  2RBL A;  2JA7 I;  2NVT I;  5C44 I;  3I4N I;  5CM2 M;  2F4M A;  2R93 I;  1Y1V I;  1Y1V S;  4NOZ A;  2PK7 A;  1USP A;  4A3F I;  2E2H I;  3Q87 A;  4A3I I;  2E2I I;  2YU9 I;  2JR6 A;  3HOY I;  3S17 I;  2AKL A;  3S1R I;  3HOU I;  3GTM I;  3GTM S;  1X3Z A;  3HOW I;  2K5R A;  2R92 I;  4BXX I;  2JA6 I;  2JS4 A;  3PO2 I;  4BY1 I;  4Y7N I;  4A3D I;  3U50 C;  3VB9 A;  5FLM I;  3H3V J;  1DL6 A;  5IP7 I;  3CQZ I;  1WW9 A;  3GTJ I;  4A3M I;  3GTO I;  3H0G I;  4QTT A;  3S1Q I;  2DE7 A;  2JA8 I;  1QYP A;  2KPI A;  3GTL I;  1I3Q I;  4MH4 A;  1TWG I;  3PO3 I;  3PO3 S;  2JA5 I;  4A3L I;  4NB8 A;  2JNY A;  4NBF A;  1PFT A;  3K7A I;  4A3E I; 
#chains in the Genus database with same CATH topology
 3S15 I;  2AYD A;  1YIT Z;  1YI2 1;  1L1O C;  3CCU Z;  1VQO Z;  3VMG A;  1TWF I;  1Y8C A;  1K73 1;  3CCR 1;  2DE5 A;  1K83 I;  2J6A A;  1Q86 2;  3G4S 1;  4XX2 A;  3J81 b;  2W04 A;  4BBS I;  2JUB A;  5T64 A;  1KRL A;  3I4M I;  1M1K 2;  4NFR A;  1ZB9 A;  1N8R 2;  2HF1 A;  4NBA A;  3I07 A;  1LQL A;  2NVY I;  3S2D I;  2QLV B;  5C3E I;  2GTI A;  1Y1W I;  3CCV Z;  3CCM Z;  4RVF A;  4E2Z A;  1Q7Y 1;  2NVQ I;  2VPY A;  1RO4 A;  1Q82 2;  3LUS A;  1VQM Z;  4MD9 A;  1YHQ 1;  1VQL Z;  5C4J I;  4QTU A;  3GKQ A;  3VMI A;  1VQ6 1;  4A3C I;  2PMZ A;  3ESW A;  5A2Q b;  2RBL A;  2VPX A;  1QF8 A;  3CC2 Z;  3CCS 1;  5CM2 M;  2QR1 B;  2R93 I;  1VQ4 1;  2NAP A;  1NP6 A;  3G6E 1;  4A3F I;  4NH1 C;  4E33 A;  2E2H I;  2JR6 A;  4MD8 A;  1RO0 A;  1Z01 A;  1KC8 1;  3S1R I;  1X3Z A;  2JIQ A;  1K8A 2;  2VPW A;  3CCR Z;  3U50 C;  3VB9 A;  5FLM I;  2YAD A;  2JIO A;  5FLX b;  1JJ2 Y;  1QVG Y;  3CD6 1;  3G4S Z;  2K3R A;  1VQP 1;  3VTN A;  3H0G I;  2DE7 A;  4MH4 A;  1TWG I;  3NDJ A;  3CCE 1;  3F3P C;  2RT9 A;  3IX0 A;  3MZK B;  3K7A I;  2IZ4 A;  3HOX I;  5D1O B;  3CCL 1;  1VQK 1;  1Q86 1;  4E2X A;  1YJN 1;  5C4X I;  5D1O A;  2O4H A;  4CL1 A;  2O53 A;  3CMA Z;  1M1K 1;  1QXF A;  3CPW Z;  2M48 A;  1N8R 1;  2QRE B;  4A93 I;  1RLY A;  3CXC Z;  1YJ9 1;  2M6N A;  1YHQ Z;  3IF8 A;  4DGL A;  2Y0S A;  4NBD A;  3S1M I;  1KQS Z;  1VQ6 Z;  1VQ8 1;  5D1P A;  3FKI I;  5A2Q f;  3GTK I;  1TWA I;  1VQ9 Z;  1AA6 A;  1WJ2 A;  1Q82 1;  1USP B;  4NBG A;  2LFU A;  4A3B I;  3IFU A;  2JIR A;  1N2F A;  3G71 Z;  1TFI A;  2QKD A;  1Z02 A;  3HOV I;  3S2H I;  1X3W A;  3CME Z;  1ML8 A;  3IR7 A;  1QVF Y;  1S7M A;  3EED A;  3NH4 A;  1VQN Z;  2V8K A;  2P28 A;  3BG0 B;  2OTJ 1;  4E30 A;  4MXU A;  2JA7 I;  2E7Z A;  5C44 I;  3NH8 A;  3I4N I;  3D2L A;  5FLX f;  3MON A;  1Y1V S;  3CD6 Z;  3T4N B;  1K8A 1;  1YUK A;  4MD7 A;  3Q87 A;  3CCE Z;  3HOY I;  5T6B A;  2H85 A;  1VQK Z;  3I56 1;  1W2B Z;  3GTM S;  3CCJ 1;  1YJN Z;  2VF1 A;  4BY1 I;  2V8J A;  1SIW A;  5IT9 f;  4RV9 A;  1VQ5 1;  4MON A;  1Z03 A;  1WW9 A;  3GTJ I;  3NDI A;  1YJ9 Z;  5LL6 f;  3CPW Y;  2QEX 1;  3GTO I;  3OW2 Z;  3PO3 S;  2KI7 B;  4S1T A;  4NB8 A;  2RIQ A;  4A3E I;  1FDI A;  3GTP I;  1NUI A;  1YI2 Z;  2LIY A;  2R6M A;  4DK1 A;  1S72 1;  2OTL 1;  1VQO 1;  4MRI A;  4NBE A;  4E2Y A;  2RHB A;  4NBC A;  1X0T A;  4E32 A;  3GTG I;  1M90 2;  2Q51 A;  1ZH1 A;  1KD1 2;  3HOZ I;  1RNI A;  1R9T I;  2QA4 1;  2QRD B;  1TWC I;  1I6H I;  5IP9 I;  5IT9 b;  2BJO A;  2JIM A;  3CCV 1;  4EWC A;  4NBH A;  3CC4 1;  2G2K A;  3I55 1;  1VLA A;  2OOX B;  4BY7 I;  3D6W A;  1Q81 2;  3GCF A;  4HGY A;  3I56 Z;  2VUM I;  3S14 I;  1Q16 A;  2HU9 A;  3CCJ Z;  3M3Y I;  4A3J I;  2NVX I;  2F4O A;  1VQL 1;  3S1N I;  4BBR I;  3CCS Z;  3CC7 1;  1VQ5 Z;  2NVT I;  2V3V A;  3CC2 1;  1VQ4 Z;  3G6E Z;  4NOZ A;  1USP A;  1YIJ 1;  2QEX Z;  2Q4Z A;  1RO2 A;  3FQM A;  4RVG A;  4A3I I;  2YU9 I;  1FDO A;  4TNU A;  2AKL A;  1VQ7 1;  3HOU I;  3HOW I;  2R92 I;  4BXX I;  2JS4 A;  3NFZ A;  3PO2 I;  1S72 Z;  3MZL B;  2JMO A;  2OTL Z;  2PM9 A;  1JJ2 Z;  4A3D I;  2WAQ A;  1QVG Z;  3H3V J;  1DL6 A;  5IP7 I;  3TE5 B;  2GU2 A;  1RQF A;  1VQP Z;  4HGZ A;  4QTT A;  1QYP A;  2JA5 I;  2IZ3 A;  2QA4 Z;  2JNY A;  4NBF A;  5T67 A;  3CCL Z;  3RZD I;  4RVD A;  1YJW 1;  1SFO I;  2R7Z I;  1M90 1;  1I50 I;  2I3C A;  2VPZ A;  1NJI 2;  3RZO I;  1KD1 1;  2GTH A;  1K9M 2;  3NH5 A;  3S16 I;  2VUG A;  1YUA A;  3TDH B;  3J80 f;  3CMA 1;  3CC4 Z;  4NB9 A;  3I55 Z;  2E9H A;  4RVH A;  4DQY B;  4A3K I;  1VQ8 Z;  3BG1 B;  3CCQ 1;  3JAM b;  3CXC Y;  1WCM I;  3HKZ A;  2JIP A;  2E2J I;  2RPR A;  1K73 2;  4NBB A;  1KQS Y;  3CC7 Z;  2OZK A;  1VQ9 1;  2LEX A;  1Q81 1;  4Y52 I;  1ZB8 A;  1YIT 1;  1YIJ Z;  3M4O I;  3GTQ I;  4X6A I;  4E2W A;  3G71 1;  2B63 I;  3CCU 1;  2QRC B;  2DE6 A;  4RS4 A;  1QVF Z;  2P3Y A;  4HH4 A;  3D9X A;  3CME 1;  2OOY B;  3EER A;  1TWH I;  1VQ7 Z;  1VQN 1;  2OTJ Z;  3KIF A;  3VMH A;  1JWH C;  3J7A 4;  3KIH A;  1Q7Y 2;  4A3G I;  2EGT A;  2ZAE B;  2F4M A;  3QWU A;  1Y1V I;  2PK7 A;  3J81 f;  4E31 A;  3F3F C;  3CCM 1;  3J80 b;  2E2I I;  2V45 A;  3S17 I;  1VQM 1;  1YJW Z;  3GTM I;  1WZN A;  2K5R A;  2JA6 I;  1W2B Y;  1P9N A;  3P5J B;  4Y7N I;  2IV2 X;  3FQQ A;  3CQZ I;  1KC8 2;  2V8I A;  2W03 A;  4A3M I;  1NJI 1;  4AYB A;  3S1Q I;  3CCQ Z;  3JAM f;  5AN9 F;  2KPI A;  1K9M 1;  2JA8 I;  3GTL I;  1I3Q I;  3PO3 I;  4A3L I;  1PFT A;  3OW2 Y;  2WB1 A;  1WII A; 
#chains in the Genus database with same CATH homology
 3S15 I;  1YIT Z;  1YI2 1;  1L1O C;  3CCU Z;  1VQO Z;  3VMG A;  1TWF I;  1K73 1;  3CCR 1;  2DE5 A;  1K83 I;  2J6A A;  1Q86 2;  3G4S 1;  4XX2 A;  3J81 b;  2W04 A;  4BBS I;  2JUB A;  5T64 A;  1KRL A;  3I4M I;  1M1K 2;  4NFR A;  1ZB9 A;  1N8R 2;  2HF1 A;  4NBA A;  3I07 A;  1LQL A;  2NVY I;  3S2D I;  2QLV B;  5C3E I;  2GTI A;  1Y1W I;  3CCV Z;  3CCM Z;  4RVF A;  4E2Z A;  1Q7Y 1;  2NVQ I;  1RO4 A;  1Q82 2;  3LUS A;  1VQM Z;  4MD9 A;  1YHQ 1;  1VQL Z;  5C4J I;  4QTU A;  3GKQ A;  3VMI A;  1VQ6 1;  4A3C I;  2PMZ A;  3ESW A;  5A2Q b;  2RBL A;  1QF8 A;  3CC2 Z;  3CCS 1;  5CM2 M;  2QR1 B;  2R93 I;  1VQ4 1;  1NP6 A;  3G6E 1;  4A3F I;  4NH1 C;  4E33 A;  2E2H I;  2JR6 A;  4MD8 A;  1RO0 A;  1Z01 A;  1KC8 1;  3S1R I;  1X3Z A;  1K8A 2;  3CCR Z;  3U50 C;  3VB9 A;  5FLM I;  2YAD A;  5FLX b;  1JJ2 Y;  1QVG Y;  3CD6 1;  3G4S Z;  2K3R A;  1VQP 1;  3VTN A;  3H0G I;  2DE7 A;  4MH4 A;  1TWG I;  3NDJ A;  3CCE 1;  3F3P C;  2RT9 A;  3IX0 A;  3MZK B;  3K7A I;  2IZ4 A;  3HOX I;  5D1O B;  3CCL 1;  1VQK 1;  1Q86 1;  4E2X A;  1YJN 1;  5C4X I;  5D1O A;  2O4H A;  4CL1 A;  2O53 A;  3CMA Z;  1M1K 1;  3CPW Z;  2M48 A;  1N8R 1;  2QRE B;  4A93 I;  1RLY A;  3CXC Z;  1YJ9 1;  2M6N A;  1YHQ Z;  3IF8 A;  4DGL A;  2Y0S A;  4NBD A;  3S1M I;  1KQS Z;  1VQ6 Z;  1VQ8 1;  5D1P A;  3FKI I;  5A2Q f;  3GTK I;  1TWA I;  1VQ9 Z;  1Q82 1;  1USP B;  4NBG A;  2LFU A;  4A3B I;  3IFU A;  1N2F A;  3G71 Z;  1TFI A;  2QKD A;  1Z02 A;  3HOV I;  3S2H I;  1X3W A;  3CME Z;  1ML8 A;  1QVF Y;  1S7M A;  3EED A;  3NH4 A;  1VQN Z;  2V8K A;  2P28 A;  3BG0 B;  2OTJ 1;  4E30 A;  4MXU A;  2JA7 I;  5C44 I;  3NH8 A;  3I4N I;  5FLX f;  3MON A;  1Y1V S;  3CD6 Z;  3T4N B;  1K8A 1;  1YUK A;  4MD7 A;  3Q87 A;  3CCE Z;  3HOY I;  5T6B A;  2H85 A;  1VQK Z;  3I56 1;  1W2B Z;  3GTM S;  3CCJ 1;  1YJN Z;  2VF1 A;  4BY1 I;  2V8J A;  5IT9 f;  4RV9 A;  1VQ5 1;  4MON A;  1Z03 A;  1WW9 A;  3GTJ I;  3NDI A;  1YJ9 Z;  5LL6 f;  3CPW Y;  2QEX 1;  3GTO I;  3OW2 Z;  3PO3 S;  2KI7 B;  4S1T A;  4NB8 A;  2RIQ A;  4A3E I;  3GTP I;  1NUI A;  1YI2 Z;  2LIY A;  2R6M A;  4DK1 A;  1S72 1;  2OTL 1;  1VQO 1;  4MRI A;  4NBE A;  4E2Y A;  2RHB A;  4NBC A;  1X0T A;  4E32 A;  3GTG I;  1M90 2;  2Q51 A;  1ZH1 A;  1KD1 2;  3HOZ I;  1RNI A;  1R9T I;  2QA4 1;  2QRD B;  1TWC I;  1I6H I;  5IP9 I;  5IT9 b;  2BJO A;  3CCV 1;  4EWC A;  4NBH A;  3CC4 1;  2G2K A;  3I55 1;  1VLA A;  2OOX B;  4BY7 I;  3D6W A;  1Q81 2;  3GCF A;  4HGY A;  3I56 Z;  2VUM I;  3S14 I;  2HU9 A;  3CCJ Z;  3M3Y I;  4A3J I;  2NVX I;  2F4O A;  1VQL 1;  3S1N I;  4BBR I;  3CCS Z;  3CC7 1;  1VQ5 Z;  2NVT I;  3CC2 1;  1VQ4 Z;  3G6E Z;  4NOZ A;  1USP A;  1YIJ 1;  2QEX Z;  2Q4Z A;  1RO2 A;  3FQM A;  4RVG A;  4A3I I;  2YU9 I;  4TNU A;  2AKL A;  1VQ7 1;  3HOU I;  3HOW I;  2R92 I;  4BXX I;  2JS4 A;  3NFZ A;  3PO2 I;  1S72 Z;  3MZL B;  2JMO A;  2OTL Z;  2PM9 A;  1JJ2 Z;  4A3D I;  2WAQ A;  1QVG Z;  3H3V J;  1DL6 A;  5IP7 I;  3TE5 B;  2GU2 A;  1RQF A;  1VQP Z;  4HGZ A;  4QTT A;  1QYP A;  2JA5 I;  2IZ3 A;  2QA4 Z;  2JNY A;  4NBF A;  5T67 A;  3CCL Z;  3RZD I;  4RVD A;  1YJW 1;  1SFO I;  2R7Z I;  1M90 1;  1I50 I;  2I3C A;  1NJI 2;  3RZO I;  1KD1 1;  2GTH A;  1K9M 2;  3NH5 A;  3S16 I;  2VUG A;  1YUA A;  3TDH B;  3J80 f;  3CMA 1;  3CC4 Z;  4NB9 A;  3I55 Z;  2E9H A;  4RVH A;  4DQY B;  4A3K I;  1VQ8 Z;  3BG1 B;  3CCQ 1;  3JAM b;  3CXC Y;  1WCM I;  3HKZ A;  2E2J I;  2RPR A;  1K73 2;  4NBB A;  1KQS Y;  3CC7 Z;  2OZK A;  1VQ9 1;  1Q81 1;  4Y52 I;  1ZB8 A;  1YIT 1;  1YIJ Z;  3M4O I;  3GTQ I;  4X6A I;  4E2W A;  3G71 1;  2B63 I;  3CCU 1;  2QRC B;  2DE6 A;  4RS4 A;  1QVF Z;  2P3Y A;  4HH4 A;  3D9X A;  3CME 1;  2OOY B;  3EER A;  1TWH I;  1VQ7 Z;  1VQN 1;  2OTJ Z;  3KIF A;  3VMH A;  1JWH C;  3J7A 4;  3KIH A;  1Q7Y 2;  4A3G I;  2EGT A;  2ZAE B;  2F4M A;  3QWU A;  1Y1V I;  2PK7 A;  3J81 f;  4E31 A;  3F3F C;  3CCM 1;  3J80 b;  2E2I I;  3S17 I;  1VQM 1;  1YJW Z;  3GTM I;  2K5R A;  2JA6 I;  1W2B Y;  1P9N A;  3P5J B;  4Y7N I;  3FQQ A;  3CQZ I;  1KC8 2;  2V8I A;  2W03 A;  4A3M I;  1NJI 1;  4AYB A;  3S1Q I;  3CCQ Z;  3JAM f;  5AN9 F;  2KPI A;  1K9M 1;  2JA8 I;  3GTL I;  1I3Q I;  3PO3 I;  4A3L I;  1PFT A;  3OW2 Y;  2WB1 A;  1WII A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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