3M3Y | Genus

Total Genus 11

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	11
sequence length	119
structure length	119
Chain Sequence	TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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Viewer cachePut cache://localLOAD_/file/5d264f73e9d3bc0f4887e903/pdb.gz

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The Resolver thinks Pdb

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Time for openFile(/file/5d264f73e9d3bc0f4887e903/pdb.gz): 1267 ms

reading 119 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

119 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 17 ms

Adding embedded #jmolscript: select ({0:118});backbone only;select *;

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase/dna-rna hybrid
publication title	X-ray structure and mechanism of RNA polymerase II stalled at an antineoplastic monofunctional platinum-DNA adduct. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	11
structure length	119
sequence length	119
ec nomenclature
pdb deposition date	2010-03-10

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF01096	TFIIS_C	Transcription factor S-II (TFIIS)
I	PF02150	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3m3yI01
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	3m3yI02

3VMGA 4BBSI 2JS4A 1QYPA 2BJOA 4A3FI 3I07A 1USPB 4NB8A 1LQLA 1I50I 1TWAI 3VMHA 2R93I 3GTPI 4NBCA 1N2FA 5C44I 1TWGI 3GKQA 3I4MI 4A3II 3RZDI 2F4MA 4A3MI 2HF1A 4NB9A 2E2JI 2B63I 3S1RI 2DE6A 3GTMI 1Y1VS 1RO4A 1DL6A 3U50C 3GCFA 3S15I 2JA7I 2F4OA 4NBBA 5IP7I 4BY7I 2K5RA 3EERA 4Y7NI 4MH4A 3H3VJ 3HOWI 3M3YI 4NBEA 3CQZI 1VLAA 1RLYA 1ZB8A 5C4XI 1R9TI 3HOYI 4NBHA 5IP9I 4QTTA 3S1MI 3HOVI 1K83I 3HOZI 1L1OC 4A93I 3HOUI 1WCMI 3S1NI 1Y1VI 3GTJI 2KPIA 3S16I 2J6AA 2YU9I 3VMIA 3S14I 3GTOI 1TFIA 4Y52I 4NBGA 3VB9A 4A3BI 1I3QI 1ML8A 3I4NI 1NUIA 1SFOI 1X3ZA 1PFTA 1TWFI 3H0GI 1I6HI 2RBLA 2E2II 2DE7A 2R7ZI 3HOXI 2NVYI 1USPA 1YUAA 3M4OI 3RZOI 4A3JI 2E2HI 1Y1WI 2R92I 3PO2I 3GTLI 4X6AI 4A3CI 5C3EI 4NBAA 1X3WA 1ZB9A 2NVTI 5CM2M 4NBFA 3PO3S 2JA5I 4A3LI 2JA8I 3S2HI 2JNYA 2AKLA 1TWHI 1WW9A 5C4JI 3S17I 4XX2A 3S1QI 4NOZA 4BXXI 2PK7A 3LUSA 2NVQI 4QTUA 3K7AI 4BY1I 3ESWA 2DE5A 3S2DI 4BBRI 2P3YA 3GTQI 4A3EI 3GTGI 5FLMI 4A3KI 4A3GI 2VUMI 3PO3I 1TWCI 3GTMS 4NBDA 2JA6I 4A3DI 2NVXI 3D6WA 2JR6A 3Q87A 3GTKI 3FKII
chains in the Genus database with same CATH superfamily

1QYPA 3NH4A 1VQL1 1USPB 1I50I 3VMHA 3NDIA 4E33A 3NH8A 3G6EZ 1N2FA 4DGLA 1QVGY 3I4MI 2F4MA 1M1K1 5IT9b 3S1RI 1QVFY 3CCLZ 2IZ3A 1NP6A 2F4OA 2VF1A 1RLYA 1KC82 1VQP1 1R9TI 3CCQ1 2VPYA 3CCV1 1VQOZ 3HOVI 4E31A 4A93I 1YJ9Z 2VPZA 3GTJI 2KPIA 3S16I 4MXUA 1VQKZ 3VB9A 1YJW1 3I55Z 1Z01A 1PFTA 1I6HI 2RBLA 2DE7A 3CMEZ 1WIIA 4HGZA 3CC2Z 2LEXA 2NVYI 4NH1C 2M48A 1YJNZ 3PO2I 3CCMZ 1QVGZ 4A3CI 5CM2M 2JA5I 2JNYA 1TWHI 2QA41 3I56Z 2VPXA 1KC81 3CCJ1 1QVFZ 1ZH1A 3CCSZ 3LUSA 1VQ51 4TNUA 4E2ZA 4RVDA 4QTUA 4RVGA 1AA6A 3G6E1 4BY1I 3ESWA 2PMZA 3CCUZ 3S2DI 4BBRI 3J80b 2P3YA 3GTQI 3CPWY 1YIJZ 4MD7A 3GTGI 4S1TA 4A3KI 4A3GI 3CCL1 2NVXI 2Q4ZA 4CL1A 3FKII 3CD61 1WJ2A 1YI2Z 1JJ2Y 1VQ91 4A3FI 1KRLA 3CMAZ 2W04A 1TWAI 3GTPI 1TWGI 3F3FC 3GKQA 1VQO1 2VUGA 4A3II 3FQMA 5A2Qb 2HF1A 2QR1B 4NB9A 4EWCA 3GTMI 2GTIA 2JIMA 3FQQA 3GCFA 4NBBA 4BY7I 2K5RA 3EERA 2E9HA 4NBEA 1Q16A 1ZB8A 3F3PC 5C4XI 1YIT1 1K731 3CME1 3HOYI 3CC21 4QTTA 3HOUI 4E30A 5LL6f 3CCM1 1VQNZ 3G4S1 3TE5B 3CPWZ 4A3BI 2OTJ1 3I561 5T6BA 3I4NI 1X3ZA 3CC4Z 2Y0SA 1N8R2 2HU9A 4E2XA 4DQYB 2R7ZI 2VPWA 2LIYA 1JJ2Z 1USPA 2JMOA 5FLXf 3IFUA 2WB1A 1YIJ1 1Y1WI 2GU2A 2EGTA 1VQM1 3GTLI 2NVTI 4NBAA 1X3WA 3TDHB 4A3LI 2AKLA 1Z03A 3JAMf 1WW9A 5A2Qf 4MD9A 1YI21 2I3CA 1JWHC 3S17I 4XX2A 4BXXI 1VQ8Z 2PK7A 1K9M2 1S72Z 2V8KA 1FDOA 2DE5A 2JIOA 3P5JB 4A3EI 2V3VA 2QEXZ 2OOYB 1P9NA 5FLMI 3PO3I 1VQ4Z 3GTMS 3G71Z 3CCEZ 1YUKA 4NBDA 2JA6I 3GTKI 2AYDA 1VQ6Z 3CXCZ 1N8R1 3VMGA 4BBSI 3CCRZ 2BJOA 1VQLZ 1Q862 1YHQZ 3I07A 4NB8A 5IT9f 2IV2X 4NBCA 1KQSY 3J7A4 5C44I 3RZDI 2QLVB 3KIHA 2B63I 1K732 1W2BY 1VQN1 2YADA 2V8JA 1RO4A 2G2KA 3CC7Z 3U50C 1DL6A 2JA7I 5IP7I 1K9M1 3J81b 3HOWI 1SIWA 2JIPA 3CQZI 3CC41 1VLAA 1VQPZ 1Q822 3CCVZ 4NBHA 5IP9I 3S1MI 2KI7B 1L1OC 1WCMI 1RO2A 3S1NI 1Y1VI 1YJ91 3HKZA 3GTOI 1TFIA 1Q861 4Y52I 4NBGA 1YJWZ 1I3QI 1VQK1 1ML8A 1NUIA 1SFOI 3I551 2OTLZ 2OOXB 3NFZA 3MZKB 1Q7Y2 3H0GI 4MONA 1S721 4MD8A 2H85A 3HOXI 5D1OA 3NH5A 3RZOI 1WZNA 2R92I 3NDJA 2QEX1 5AN9F 1KQSZ 3KIFA 4X6AI 1YJN1 2GTHA 3PO3S 1ZB9A 3CXCY 4NBFA 2QA4Z 2O4HA 2LFUA 4AYBA 1S7MA 2V8IA 3CCJZ 1Q821 1VQ61 1X0TA 4DK1A 3J80f 1W2BZ 2IZ4A 1KD11 3CCR1 3S1QI 1YHQ1 1VQ5Z 2PM9A 2JIRA 3CCS1 2NVQI 1NJI1 4RVHA 3K7AI 3CCU1 4RV9A 3J81f 2VUMI 1TWCI 1Y8CA 1FDIA 2QRDB 4HH4A 2JR6A 2QKDA 3CC71 4E32A 1Q7Y1 3CD6Z 1VQ9Z 2JS4A 4NFRA 3BG0B 5T64A 1LQLA 2RT9A 4HGYA 2ZAEB 3CMA1 2R93I 1M902 3EEDA 3IX0A 4A3MI 2E2JI 2DE6A 2JIQA 2O53A 1Y1VS 3S15I 3T4NB 4E2YA 1K8A2 1VQ7Z 1RNIA 4Y7NI 3H3VJ 4MH4A 3M3YI 2OTL1 1YITZ 3OW2Y 2R6MA 4RS4A 2QREB 1K83I 1Q812 3HOZI 2WAQA 1Z02A 3VTNA 3G4SZ 4E2WA 2J6AA 2K3RA 3VMIA 2YU9I 3S14I 2OTJZ 2Q51A 2RHBA 3MZLB 1M901 1TWFI 3MONA 3IF8A 4MRIA 3CCQZ 2E2II 1RO0A 5T67A 1KD12 3QWUA 1YUAA 2RPRA 3M4OI 4A3JI 2E2HI 2E7ZA 1NJI2 1VQMZ 5D1PA 1RQFA 2V45A 5C3EI 1K8A1 1M1K2 2JA8I 3S2HI 1QF8A 3D9XA 5FLXb 2M6NA 5C4JI 5D1OB 1QXFA 3IR7A 2P28A 4NOZA 2RIQA 1Q811 3BG1B 2W03A 1VQ81 3JAMb 2QRCB 4RVFA 3OW2Z 1VQ41 3G711 4A3DI 3CCE1 2OZKA 2NAPA 3D6WA 3Q87A 3D2LA 2JUBA 1VQ71
chains in the Genus database with same CATH topology

1QYPA 3NH4A 1VQL1 1USPB 1I50I 3VMHA 3NDIA 4E33A 3NH8A 3G6EZ 1N2FA 4DGLA 1QVGY 3I4MI 2F4MA 1M1K1 5IT9b 3S1RI 1QVFY 3CCLZ 2IZ3A 1NP6A 2F4OA 2VF1A 1RLYA 1KC82 1VQP1 1R9TI 3CCQ1 3CCV1 1VQOZ 3HOVI 4E31A 4A93I 1YJ9Z 3GTJI 2KPIA 3S16I 4MXUA 1VQKZ 3VB9A 1YJW1 3I55Z 1Z01A 1PFTA 1I6HI 2RBLA 2DE7A 3CMEZ 1WIIA 4HGZA 3CC2Z 2NVYI 4NH1C 2M48A 1YJNZ 3PO2I 3CCMZ 1QVGZ 4A3CI 5CM2M 2JA5I 2JNYA 1TWHI 2QA41 3I56Z 1KC81 3CCJ1 1QVFZ 1ZH1A 3CCSZ 3LUSA 1VQ51 4TNUA 4E2ZA 4RVDA 4QTUA 4RVGA 3G6E1 4BY1I 3ESWA 2PMZA 3CCUZ 3S2DI 4BBRI 3J80b 2P3YA 3GTQI 3CPWY 1YIJZ 4MD7A 3GTGI 4S1TA 4A3KI 4A3GI 3CCL1 2NVXI 2Q4ZA 4CL1A 3FKII 3CD61 1YI2Z 1JJ2Y 1VQ91 4A3FI 1KRLA 3CMAZ 2W04A 1TWAI 3GTPI 1TWGI 3F3FC 3GKQA 1VQO1 2VUGA 4A3II 3FQMA 5A2Qb 2HF1A 2QR1B 4NB9A 4EWCA 3GTMI 2GTIA 3FQQA 3GCFA 4NBBA 4BY7I 2K5RA 3EERA 2E9HA 4NBEA 1ZB8A 3F3PC 5C4XI 1YIT1 1K731 3CME1 3HOYI 3CC21 4QTTA 3HOUI 4E30A 5LL6f 3CCM1 1VQNZ 3G4S1 3TE5B 3CPWZ 4A3BI 2OTJ1 3I561 5T6BA 3I4NI 1X3ZA 3CC4Z 2Y0SA 1N8R2 2HU9A 4E2XA 4DQYB 2R7ZI 2LIYA 1JJ2Z 1USPA 2JMOA 5FLXf 3IFUA 2WB1A 1YIJ1 1Y1WI 2GU2A 2EGTA 1VQM1 3GTLI 2NVTI 4NBAA 1X3WA 3TDHB 4A3LI 2AKLA 1Z03A 3JAMf 1WW9A 5A2Qf 4MD9A 1YI21 2I3CA 1JWHC 3S17I 4XX2A 4BXXI 1VQ8Z 2PK7A 1K9M2 1S72Z 2V8KA 2DE5A 3P5JB 4A3EI 2QEXZ 2OOYB 1P9NA 5FLMI 3PO3I 1VQ4Z 3GTMS 3G71Z 3CCEZ 1YUKA 4NBDA 2JA6I 3GTKI 1VQ6Z 3CXCZ 1N8R1 3VMGA 4BBSI 3CCRZ 2BJOA 1VQLZ 1Q862 1YHQZ 3I07A 4NB8A 5IT9f 4NBCA 1KQSY 3J7A4 5C44I 3RZDI 2QLVB 3KIHA 2B63I 1K732 1W2BY 1VQN1 2YADA 2V8JA 1RO4A 2G2KA 3CC7Z 3U50C 1DL6A 2JA7I 5IP7I 1K9M1 3J81b 3HOWI 3CQZI 3CC41 1VLAA 1VQPZ 1Q822 3CCVZ 4NBHA 5IP9I 3S1MI 2KI7B 1L1OC 1WCMI 1RO2A 3S1NI 1Y1VI 1YJ91 3HKZA 3GTOI 1TFIA 1Q861 4Y52I 4NBGA 1YJWZ 1I3QI 1VQK1 1ML8A 1NUIA 1SFOI 3I551 2OTLZ 2OOXB 3NFZA 3MZKB 1Q7Y2 3H0GI 4MONA 1S721 4MD8A 2H85A 3HOXI 5D1OA 3NH5A 3RZOI 2R92I 3NDJA 2QEX1 5AN9F 1KQSZ 3KIFA 4X6AI 1YJN1 2GTHA 3PO3S 1ZB9A 3CXCY 4NBFA 2QA4Z 2O4HA 2LFUA 4AYBA 1S7MA 2V8IA 3CCJZ 1Q821 1VQ61 1X0TA 4DK1A 3J80f 1W2BZ 2IZ4A 1KD11 3CCR1 3S1QI 1YHQ1 1VQ5Z 2PM9A 3CCS1 2NVQI 1NJI1 4RVHA 3K7AI 3CCU1 4RV9A 3J81f 2VUMI 1TWCI 2QRDB 4HH4A 2JR6A 2QKDA 3CC71 4E32A 1Q7Y1 3CD6Z 1VQ9Z 2JS4A 4NFRA 3BG0B 5T64A 1LQLA 2RT9A 4HGYA 2ZAEB 3CMA1 2R93I 1M902 3EEDA 3IX0A 4A3MI 2E2JI 2DE6A 2O53A 1Y1VS 3S15I 3T4NB 4E2YA 1K8A2 1VQ7Z 1RNIA 4Y7NI 3H3VJ 4MH4A 3M3YI 2OTL1 1YITZ 3OW2Y 2R6MA 4RS4A 2QREB 1K83I 1Q812 3HOZI 2WAQA 1Z02A 3VTNA 3G4SZ 4E2WA 2J6AA 2K3RA 3VMIA 2YU9I 3S14I 2OTJZ 2Q51A 2RHBA 3MZLB 1M901 1TWFI 3MONA 3IF8A 4MRIA 3CCQZ 2E2II 1RO0A 5T67A 1KD12 3QWUA 1YUAA 2RPRA 3M4OI 4A3JI 2E2HI 1NJI2 1VQMZ 5D1PA 1RQFA 5C3EI 1K8A1 1M1K2 2JA8I 3S2HI 1QF8A 3D9XA 5FLXb 2M6NA 5C4JI 5D1OB 2P28A 4NOZA 2RIQA 1Q811 3BG1B 2W03A 1VQ81 3JAMb 2QRCB 4RVFA 3OW2Z 1VQ41 3G711 4A3DI 3CCE1 2OZKA 3D6WA 3Q87A 2JUBA 1VQ71
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 3VMG A;  4BBS I;  2JS4 A;  1QYP A;  2BJO A;  4A3F I;  3I07 A;  1USP B;  4NB8 A;  1LQL A;  1I50 I;  1TWA I;  3VMH A;  2R93 I;  3GTP I;  4NBC A;  1N2F A;  5C44 I;  1TWG I;  3GKQ A;  3I4M I;  4A3I I;  3RZD I;  2F4M A;  4A3M I;  2HF1 A;  4NB9 A;  2E2J I;  2B63 I;  3S1R I;  2DE6 A;  3GTM I;  1Y1V S;  1RO4 A;  1DL6 A;  3U50 C;  3GCF A;  3S15 I;  2JA7 I;  2F4O A;  4NBB A;  5IP7 I;  4BY7 I;  2K5R A;  3EER A;  4Y7N I;  4MH4 A;  3H3V J;  3HOW I;  3M3Y I;  4NBE A;  3CQZ I;  1VLA A;  1RLY A;  1ZB8 A;  5C4X I;  1R9T I;  3HOY I;  4NBH A;  5IP9 I;  4QTT A;  3S1M I;  3HOV I;  1K83 I;  3HOZ I;  1L1O C;  4A93 I;  3HOU I;  1WCM I;  3S1N I;  1Y1V I;  3GTJ I;  2KPI A;  3S16 I;  2J6A A;  2YU9 I;  3VMI A;  3S14 I;  3GTO I;  1TFI A;  4Y52 I;  4NBG A;  3VB9 A;  4A3B I;  1I3Q I;  1ML8 A;  3I4N I;  1NUI A;  1SFO I;  1X3Z A;  1PFT A;  1TWF I;  3H0G I;  1I6H I;  2RBL A;  2E2I I;  2DE7 A;  2R7Z I;  3HOX I;  2NVY I;  1USP A;  1YUA A;  3M4O I;  3RZO I;  4A3J I;  2E2H I;  1Y1W I;  2R92 I;  3PO2 I;  3GTL I;  4X6A I;  4A3C I;  5C3E I;  4NBA A;  1X3W A;  1ZB9 A;  2NVT I;  5CM2 M;  4NBF A;  3PO3 S;  2JA5 I;  4A3L I;  2JA8 I;  3S2H I;  2JNY A;  2AKL A;  1TWH I;  1WW9 A;  5C4J I;  3S17 I;  4XX2 A;  3S1Q I;  4NOZ A;  4BXX I;  2PK7 A;  3LUS A;  2NVQ I;  4QTU A;  3K7A I;  4BY1 I;  3ESW A;  2DE5 A;  3S2D I;  4BBR I;  2P3Y A;  3GTQ I;  4A3E I;  3GTG I;  5FLM I;  4A3K I;  4A3G I;  2VUM I;  3PO3 I;  1TWC I;  3GTM S;  4NBD A;  2JA6 I;  4A3D I;  2NVX I;  3D6W A;  2JR6 A;  3Q87 A;  3GTK I;  3FKI I; 
#chains in the Genus database with same CATH topology
 1QYP A;  3NH4 A;  1VQL 1;  1USP B;  1I50 I;  3VMH A;  3NDI A;  4E33 A;  3NH8 A;  3G6E Z;  1N2F A;  4DGL A;  1QVG Y;  3I4M I;  2F4M A;  1M1K 1;  5IT9 b;  3S1R I;  1QVF Y;  3CCL Z;  2IZ3 A;  1NP6 A;  2F4O A;  2VF1 A;  1RLY A;  1KC8 2;  1VQP 1;  1R9T I;  3CCQ 1;  2VPY A;  3CCV 1;  1VQO Z;  3HOV I;  4E31 A;  4A93 I;  1YJ9 Z;  2VPZ A;  3GTJ I;  2KPI A;  3S16 I;  4MXU A;  1VQK Z;  3VB9 A;  1YJW 1;  3I55 Z;  1Z01 A;  1PFT A;  1I6H I;  2RBL A;  2DE7 A;  3CME Z;  1WII A;  4HGZ A;  3CC2 Z;  2LEX A;  2NVY I;  4NH1 C;  2M48 A;  1YJN Z;  3PO2 I;  3CCM Z;  1QVG Z;  4A3C I;  5CM2 M;  2JA5 I;  2JNY A;  1TWH I;  2QA4 1;  3I56 Z;  2VPX A;  1KC8 1;  3CCJ 1;  1QVF Z;  1ZH1 A;  3CCS Z;  3LUS A;  1VQ5 1;  4TNU A;  4E2Z A;  4RVD A;  4QTU A;  4RVG A;  1AA6 A;  3G6E 1;  4BY1 I;  3ESW A;  2PMZ A;  3CCU Z;  3S2D I;  4BBR I;  3J80 b;  2P3Y A;  3GTQ I;  3CPW Y;  1YIJ Z;  4MD7 A;  3GTG I;  4S1T A;  4A3K I;  4A3G I;  3CCL 1;  2NVX I;  2Q4Z A;  4CL1 A;  3FKI I;  3CD6 1;  1WJ2 A;  1YI2 Z;  1JJ2 Y;  1VQ9 1;  4A3F I;  1KRL A;  3CMA Z;  2W04 A;  1TWA I;  3GTP I;  1TWG I;  3F3F C;  3GKQ A;  1VQO 1;  2VUG A;  4A3I I;  3FQM A;  5A2Q b;  2HF1 A;  2QR1 B;  4NB9 A;  4EWC A;  3GTM I;  2GTI A;  2JIM A;  3FQQ A;  3GCF A;  4NBB A;  4BY7 I;  2K5R A;  3EER A;  2E9H A;  4NBE A;  1Q16 A;  1ZB8 A;  3F3P C;  5C4X I;  1YIT 1;  1K73 1;  3CME 1;  3HOY I;  3CC2 1;  4QTT A;  3HOU I;  4E30 A;  5LL6 f;  3CCM 1;  1VQN Z;  3G4S 1;  3TE5 B;  3CPW Z;  4A3B I;  2OTJ 1;  3I56 1;  5T6B A;  3I4N I;  1X3Z A;  3CC4 Z;  2Y0S A;  1N8R 2;  2HU9 A;  4E2X A;  4DQY B;  2R7Z I;  2VPW A;  2LIY A;  1JJ2 Z;  1USP A;  2JMO A;  5FLX f;  3IFU A;  2WB1 A;  1YIJ 1;  1Y1W I;  2GU2 A;  2EGT A;  1VQM 1;  3GTL I;  2NVT I;  4NBA A;  1X3W A;  3TDH B;  4A3L I;  2AKL A;  1Z03 A;  3JAM f;  1WW9 A;  5A2Q f;  4MD9 A;  1YI2 1;  2I3C A;  1JWH C;  3S17 I;  4XX2 A;  4BXX I;  1VQ8 Z;  2PK7 A;  1K9M 2;  1S72 Z;  2V8K A;  1FDO A;  2DE5 A;  2JIO A;  3P5J B;  4A3E I;  2V3V A;  2QEX Z;  2OOY B;  1P9N A;  5FLM I;  3PO3 I;  1VQ4 Z;  3GTM S;  3G71 Z;  3CCE Z;  1YUK A;  4NBD A;  2JA6 I;  3GTK I;  2AYD A;  1VQ6 Z;  3CXC Z;  1N8R 1;  3VMG A;  4BBS I;  3CCR Z;  2BJO A;  1VQL Z;  1Q86 2;  1YHQ Z;  3I07 A;  4NB8 A;  5IT9 f;  2IV2 X;  4NBC A;  1KQS Y;  3J7A 4;  5C44 I;  3RZD I;  2QLV B;  3KIH A;  2B63 I;  1K73 2;  1W2B Y;  1VQN 1;  2YAD A;  2V8J A;  1RO4 A;  2G2K A;  3CC7 Z;  3U50 C;  1DL6 A;  2JA7 I;  5IP7 I;  1K9M 1;  3J81 b;  3HOW I;  1SIW A;  2JIP A;  3CQZ I;  3CC4 1;  1VLA A;  1VQP Z;  1Q82 2;  3CCV Z;  4NBH A;  5IP9 I;  3S1M I;  2KI7 B;  1L1O C;  1WCM I;  1RO2 A;  3S1N I;  1Y1V I;  1YJ9 1;  3HKZ A;  3GTO I;  1TFI A;  1Q86 1;  4Y52 I;  4NBG A;  1YJW Z;  1I3Q I;  1VQK 1;  1ML8 A;  1NUI A;  1SFO I;  3I55 1;  2OTL Z;  2OOX B;  3NFZ A;  3MZK B;  1Q7Y 2;  3H0G I;  4MON A;  1S72 1;  4MD8 A;  2H85 A;  3HOX I;  5D1O A;  3NH5 A;  3RZO I;  1WZN A;  2R92 I;  3NDJ A;  2QEX 1;  5AN9 F;  1KQS Z;  3KIF A;  4X6A I;  1YJN 1;  2GTH A;  3PO3 S;  1ZB9 A;  3CXC Y;  4NBF A;  2QA4 Z;  2O4H A;  2LFU A;  4AYB A;  1S7M A;  2V8I A;  3CCJ Z;  1Q82 1;  1VQ6 1;  1X0T A;  4DK1 A;  3J80 f;  1W2B Z;  2IZ4 A;  1KD1 1;  3CCR 1;  3S1Q I;  1YHQ 1;  1VQ5 Z;  2PM9 A;  2JIR A;  3CCS 1;  2NVQ I;  1NJI 1;  4RVH A;  3K7A I;  3CCU 1;  4RV9 A;  3J81 f;  2VUM I;  1TWC I;  1Y8C A;  1FDI A;  2QRD B;  4HH4 A;  2JR6 A;  2QKD A;  3CC7 1;  4E32 A;  1Q7Y 1;  3CD6 Z;  1VQ9 Z;  2JS4 A;  4NFR A;  3BG0 B;  5T64 A;  1LQL A;  2RT9 A;  4HGY A;  2ZAE B;  3CMA 1;  2R93 I;  1M90 2;  3EED A;  3IX0 A;  4A3M I;  2E2J I;  2DE6 A;  2JIQ A;  2O53 A;  1Y1V S;  3S15 I;  3T4N B;  4E2Y A;  1K8A 2;  1VQ7 Z;  1RNI A;  4Y7N I;  3H3V J;  4MH4 A;  3M3Y I;  2OTL 1;  1YIT Z;  3OW2 Y;  2R6M A;  4RS4 A;  2QRE B;  1K83 I;  1Q81 2;  3HOZ I;  2WAQ A;  1Z02 A;  3VTN A;  3G4S Z;  4E2W A;  2J6A A;  2K3R A;  3VMI A;  2YU9 I;  3S14 I;  2OTJ Z;  2Q51 A;  2RHB A;  3MZL B;  1M90 1;  1TWF I;  3MON A;  3IF8 A;  4MRI A;  3CCQ Z;  2E2I I;  1RO0 A;  5T67 A;  1KD1 2;  3QWU A;  1YUA A;  2RPR A;  3M4O I;  4A3J I;  2E2H I;  2E7Z A;  1NJI 2;  1VQM Z;  5D1P A;  1RQF A;  2V45 A;  5C3E I;  1K8A 1;  1M1K 2;  2JA8 I;  3S2H I;  1QF8 A;  3D9X A;  5FLX b;  2M6N A;  5C4J I;  5D1O B;  1QXF A;  3IR7 A;  2P28 A;  4NOZ A;  2RIQ A;  1Q81 1;  3BG1 B;  2W03 A;  1VQ8 1;  3JAM b;  2QRC B;  4RVF A;  3OW2 Z;  1VQ4 1;  3G71 1;  4A3D I;  3CCE 1;  2OZK A;  2NAP A;  3D6W A;  3Q87 A;  3D2L A;  2JUB A;  1VQ7 1; 
#chains in the Genus database with same CATH homology
 1QYP A;  3NH4 A;  1VQL 1;  1USP B;  1I50 I;  3VMH A;  3NDI A;  4E33 A;  3NH8 A;  3G6E Z;  1N2F A;  4DGL A;  1QVG Y;  3I4M I;  2F4M A;  1M1K 1;  5IT9 b;  3S1R I;  1QVF Y;  3CCL Z;  2IZ3 A;  1NP6 A;  2F4O A;  2VF1 A;  1RLY A;  1KC8 2;  1VQP 1;  1R9T I;  3CCQ 1;  3CCV 1;  1VQO Z;  3HOV I;  4E31 A;  4A93 I;  1YJ9 Z;  3GTJ I;  2KPI A;  3S16 I;  4MXU A;  1VQK Z;  3VB9 A;  1YJW 1;  3I55 Z;  1Z01 A;  1PFT A;  1I6H I;  2RBL A;  2DE7 A;  3CME Z;  1WII A;  4HGZ A;  3CC2 Z;  2NVY I;  4NH1 C;  2M48 A;  1YJN Z;  3PO2 I;  3CCM Z;  1QVG Z;  4A3C I;  5CM2 M;  2JA5 I;  2JNY A;  1TWH I;  2QA4 1;  3I56 Z;  1KC8 1;  3CCJ 1;  1QVF Z;  1ZH1 A;  3CCS Z;  3LUS A;  1VQ5 1;  4TNU A;  4E2Z A;  4RVD A;  4QTU A;  4RVG A;  3G6E 1;  4BY1 I;  3ESW A;  2PMZ A;  3CCU Z;  3S2D I;  4BBR I;  3J80 b;  2P3Y A;  3GTQ I;  3CPW Y;  1YIJ Z;  4MD7 A;  3GTG I;  4S1T A;  4A3K I;  4A3G I;  3CCL 1;  2NVX I;  2Q4Z A;  4CL1 A;  3FKI I;  3CD6 1;  1YI2 Z;  1JJ2 Y;  1VQ9 1;  4A3F I;  1KRL A;  3CMA Z;  2W04 A;  1TWA I;  3GTP I;  1TWG I;  3F3F C;  3GKQ A;  1VQO 1;  2VUG A;  4A3I I;  3FQM A;  5A2Q b;  2HF1 A;  2QR1 B;  4NB9 A;  4EWC A;  3GTM I;  2GTI A;  3FQQ A;  3GCF A;  4NBB A;  4BY7 I;  2K5R A;  3EER A;  2E9H A;  4NBE A;  1ZB8 A;  3F3P C;  5C4X I;  1YIT 1;  1K73 1;  3CME 1;  3HOY I;  3CC2 1;  4QTT A;  3HOU I;  4E30 A;  5LL6 f;  3CCM 1;  1VQN Z;  3G4S 1;  3TE5 B;  3CPW Z;  4A3B I;  2OTJ 1;  3I56 1;  5T6B A;  3I4N I;  1X3Z A;  3CC4 Z;  2Y0S A;  1N8R 2;  2HU9 A;  4E2X A;  4DQY B;  2R7Z I;  2LIY A;  1JJ2 Z;  1USP A;  2JMO A;  5FLX f;  3IFU A;  2WB1 A;  1YIJ 1;  1Y1W I;  2GU2 A;  2EGT A;  1VQM 1;  3GTL I;  2NVT I;  4NBA A;  1X3W A;  3TDH B;  4A3L I;  2AKL A;  1Z03 A;  3JAM f;  1WW9 A;  5A2Q f;  4MD9 A;  1YI2 1;  2I3C A;  1JWH C;  3S17 I;  4XX2 A;  4BXX I;  1VQ8 Z;  2PK7 A;  1K9M 2;  1S72 Z;  2V8K A;  2DE5 A;  3P5J B;  4A3E I;  2QEX Z;  2OOY B;  1P9N A;  5FLM I;  3PO3 I;  1VQ4 Z;  3GTM S;  3G71 Z;  3CCE Z;  1YUK A;  4NBD A;  2JA6 I;  3GTK I;  1VQ6 Z;  3CXC Z;  1N8R 1;  3VMG A;  4BBS I;  3CCR Z;  2BJO A;  1VQL Z;  1Q86 2;  1YHQ Z;  3I07 A;  4NB8 A;  5IT9 f;  4NBC A;  1KQS Y;  3J7A 4;  5C44 I;  3RZD I;  2QLV B;  3KIH A;  2B63 I;  1K73 2;  1W2B Y;  1VQN 1;  2YAD A;  2V8J A;  1RO4 A;  2G2K A;  3CC7 Z;  3U50 C;  1DL6 A;  2JA7 I;  5IP7 I;  1K9M 1;  3J81 b;  3HOW I;  3CQZ I;  3CC4 1;  1VLA A;  1VQP Z;  1Q82 2;  3CCV Z;  4NBH A;  5IP9 I;  3S1M I;  2KI7 B;  1L1O C;  1WCM I;  1RO2 A;  3S1N I;  1Y1V I;  1YJ9 1;  3HKZ A;  3GTO I;  1TFI A;  1Q86 1;  4Y52 I;  4NBG A;  1YJW Z;  1I3Q I;  1VQK 1;  1ML8 A;  1NUI A;  1SFO I;  3I55 1;  2OTL Z;  2OOX B;  3NFZ A;  3MZK B;  1Q7Y 2;  3H0G I;  4MON A;  1S72 1;  4MD8 A;  2H85 A;  3HOX I;  5D1O A;  3NH5 A;  3RZO I;  2R92 I;  3NDJ A;  2QEX 1;  5AN9 F;  1KQS Z;  3KIF A;  4X6A I;  1YJN 1;  2GTH A;  3PO3 S;  1ZB9 A;  3CXC Y;  4NBF A;  2QA4 Z;  2O4H A;  2LFU A;  4AYB A;  1S7M A;  2V8I A;  3CCJ Z;  1Q82 1;  1VQ6 1;  1X0T A;  4DK1 A;  3J80 f;  1W2B Z;  2IZ4 A;  1KD1 1;  3CCR 1;  3S1Q I;  1YHQ 1;  1VQ5 Z;  2PM9 A;  3CCS 1;  2NVQ I;  1NJI 1;  4RVH A;  3K7A I;  3CCU 1;  4RV9 A;  3J81 f;  2VUM I;  1TWC I;  2QRD B;  4HH4 A;  2JR6 A;  2QKD A;  3CC7 1;  4E32 A;  1Q7Y 1;  3CD6 Z;  1VQ9 Z;  2JS4 A;  4NFR A;  3BG0 B;  5T64 A;  1LQL A;  2RT9 A;  4HGY A;  2ZAE B;  3CMA 1;  2R93 I;  1M90 2;  3EED A;  3IX0 A;  4A3M I;  2E2J I;  2DE6 A;  2O53 A;  1Y1V S;  3S15 I;  3T4N B;  4E2Y A;  1K8A 2;  1VQ7 Z;  1RNI A;  4Y7N I;  3H3V J;  4MH4 A;  3M3Y I;  2OTL 1;  1YIT Z;  3OW2 Y;  2R6M A;  4RS4 A;  2QRE B;  1K83 I;  1Q81 2;  3HOZ I;  2WAQ A;  1Z02 A;  3VTN A;  3G4S Z;  4E2W A;  2J6A A;  2K3R A;  3VMI A;  2YU9 I;  3S14 I;  2OTJ Z;  2Q51 A;  2RHB A;  3MZL B;  1M90 1;  1TWF I;  3MON A;  3IF8 A;  4MRI A;  3CCQ Z;  2E2I I;  1RO0 A;  5T67 A;  1KD1 2;  3QWU A;  1YUA A;  2RPR A;  3M4O I;  4A3J I;  2E2H I;  1NJI 2;  1VQM Z;  5D1P A;  1RQF A;  5C3E I;  1K8A 1;  1M1K 2;  2JA8 I;  3S2H I;  1QF8 A;  3D9X A;  5FLX b;  2M6N A;  5C4J I;  5D1O B;  2P28 A;  4NOZ A;  2RIQ A;  1Q81 1;  3BG1 B;  2W03 A;  1VQ8 1;  3JAM b;  2QRC B;  4RVF A;  3OW2 Z;  1VQ4 1;  3G71 1;  4A3D I;  3CCE 1;  2OZK A;  3D6W A;  3Q87 A;  2JUB A;  1VQ7 1;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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3M3YI

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations