4A3C | Genus

Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	15
sequence length	119
structure length	119
Chain Sequence	TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__532315874572092__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__532315874572092__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/4A3C/I/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__532315874572092__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"532315874572092","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/4A3C/I/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__532315874572092__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5d266b3d0c9c32cc43b99355/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5d266b3d0c9c32cc43b99355/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5d266b3d0c9c32cc43b99355/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5d266b3d0c9c32cc43b99355/pdb.gz): 716 ms

reading 119 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

119 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 18 ms

Adding embedded #jmolscript: select ({0:118});backbone only;select *;

platformSpeed = 8

cartoonsFancy = true

sheetSmoothing = 1.0

traceAlpha = true

loadScript /static/js/j2s/core/corescriptcmd.z.js

specularPower = 9

ambientPercent = 20

antialiasDisplay = true

Script completed

Jmol script terminated

loadScript /static/js/j2s/J/g3d/HermiteRenderer.js

loadScript /static/js/j2s/J/renderbio/BioMeshRenderer.js

loadScript /static/js/j2s/J/render/MeshRenderer.js

loadScript /static/js/j2s/J/shape/Mesh.js

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription
publication title	Structural basis of initial RNA polymerase II transcription. pubmed doi rcsb
molecule keywords	DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus	15
structure length	119
sequence length	119
ec nomenclature
pdb deposition date	2011-09-30

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF01096	TFIIS_C	Transcription factor S-II (TFIIS)
I	PF02150	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	4a3cI01
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	4a3cI02

1PFTA 3M4OI 3HOWI 1VLAA 1TWGI 4QTTA 5CM2M 4A3LI 4A3DI 4BBSI 4NBEA 1I6HI 1Y1VI 2HF1A 2JA6I 3S1QI 5C4XI 2JA8I 3VMGA 3GTJI 1LQLA 1YUAA 3S16I 2NVXI 5C4JI 3PO2I 3HOZI 3S1MI 2JA7I 3PO3S 1TWFI 3GTQI 4A3CI 1K83I 4NB8A 1RO4A 4QTUA 4A93I 1TFIA 1ZB9A 5FLMI 4NOZA 1TWAI 4BY1I 2R92I 1X3ZA 3GCFA 2E2II 2JA5I 2KPIA 3VMHA 3I4NI 4A3GI 4A3MI 2R93I 4A3II 2VUMI 3LUSA 4NBFA 3GTGI 2JR6A 5IP9I 3GTMS 4NBAA 1SFOI 4BXXI 3S17I 5C3EI 3S14I 1L1OC 2JNYA 4A3KI 5C44I 2E2HI 2R7ZI 3S2DI 3FKII 2P3YA 2NVYI 2BJOA 3HOYI 4NBBA 1QYPA 2DE6A 3S1RI 3CQZI 4A3FI 3RZOI 1N2FA 4XX2A 2RBLA 2F4OA 2PK7A 1X3WA 2F4MA 1USPB 2J6AA 1RLYA 1Y1VS 1TWCI 1Y1WI 3S15I 4NBHA 5IP7I 4A3EI 1USPA 1NUIA 4Y52I 3HOXI 3U50C 1DL6A 4BY7I 3H3VJ 2NVTI 3GKQA 3M3YI 3K7AI 3Q87A 3HOUI 1I50I 4NB9A 3GTOI 4NBCA 2DE5A 4NBGA 2E2JI 3PO3I 3HOVI 4A3JI 2YU9I 2B63I 2K5RA 4MH4A 2NVQI 3I4MI 4A3BI 3ESWA 4NBDA 3S1NI 1WW9A 1I3QI 2DE7A 3I07A 3RZDI 3EERA 3S2HI 3VMIA 1ML8A 1ZB8A 1WCMI 3GTLI 3GTPI 4X6AI 3H0GI 3GTMI 3D6WA 4BBRI 1R9TI 2AKLA 1TWHI 3VB9A 3GTKI 2JS4A 4Y7NI
chains in the Genus database with same CATH superfamily

5IT9f 3CC7Z 3CD61 4MD8A 3CC71 3CCVZ 1M1K2 4EWCA 3KIFA 2RIQA 2JA6I 3CCV1 3S1QI 2JA8I 3VMGA 1WIIA 3GTJI 1LQLA 2R6MA 5AN9F 2IV2X 3CCRZ 5C4JI 3OW2Z 3CCR1 4A3CI 1K83I 1K731 2Y0SA 1YIJZ 3TDHB 2KI7B 5LL6f 2WB1A 4E2WA 1YIJ1 5FLMI 3GCFA 2JA5I 2V3VA 5D1PA 3F3FC 3LUSA 3CCMZ 5IP9I 2EGTA 3CCM1 3S14I 1L1OC 2YADA 2QA4Z 3BG0B 1YITZ 1K732 2DE6A 3S1RI 2QA41 2JIQA 2QLVB 3RZOI 1YIT1 2RBLA 2F4OA 1Y1VS 5A2Qf 1Y1WI 1RO0A 2E7ZA 1NUIA 2AYDA 3HOXI 1Q811 4DQYB 1KQSZ 1JJ2Z 3M3YI 3K7AI 2NAPA 1YJWZ 3VTNA 4NBCA 4NBGA 1YJW1 2GU2A 1AA6A 3PO3I 2IZ4A 3CPWZ 3I4MI 2W04A 1NJI1 3F3PC 2I3CA 1QVFZ 3I07A 3IF8A 2RT9A 3HKZA 1ML8A 2K3RA 2QRCB 2OTL1 1VQ61 4X6AI 3H0GI 3QWUA 1Q812 1RNIA 4RVDA 3I55Z 1K9M1 1KQSY 3GTKI 2VF1A 1JJ2Y 4Y7NI 3I551 1VQKZ 1PFTA 3P5JB 3CC2Z 2O4HA 1VQK1 3HOWI 3CC21 2QEX1 1Z02A 4NH1C 1NJI2 4A3LI 3JAMf 3CPWY 5FLXf 5C4XI 4E2YA 1QVFY 1VQ9Z 2VPXA 3MZKB 2NVXI 2JIOA 3HOZI 1VQ91 5T67A 1N8R1 4TNUA 3JAMb 3GTQI 5FLXb 1Q7Y1 3BG1B 1FDIA 2V8IA 1VQLZ 2P28A 4A93I 1K9M2 4NOZA 1VQL1 4BY1I 1X3ZA 4MD9A 3VMHA 1VQ8Z 1VQNZ 3I4NI 4A3MI 2VUGA 1VQ81 1VQN1 2R93I 2QREB 2VUMI 2ZAEB 4NBFA 3TE5B 1Q821 2PM9A 4BXXI 3S17I 2QR1B 5C3EI 1KC81 1VQ4Z 2JNYA 4A3KI 5C44I 4HGYA 2E2HI 2R7ZI 1VQ41 3IX0A 1N8R2 3HOYI 4NBBA 1Q7Y2 4XX2A 3CXCZ 1X3WA 1TWCI 4CL1A 4NBHA 2NVTI 3Q87A 1Y8CA 1Q822 3NH5A 1KC82 3HOVI 2YU9I 1FDOA 1VQPZ 2NVQI 1Z03A 3KIHA 2QRDB 2JIMA 3EERA 3S2HI 3VMIA 3CXCY 1Q862 3NDJA 1WCMI 3NH8A 3CCJZ 3J7A4 3CCJ1 4MONA 3T4NB 4BBRI 2LEXA 3J80f 2AKLA 2V8KA 2JS4A 3IR7A 1VLAA 3CCLZ 2OTJZ 4QTTA 5CM2M 3MONA 3CCL1 2OTJ1 4A3DI 3J80b 4NBEA 3CMEZ 1I6HI 4RVFA 1QVGZ 1Y1VI 2HF1A 3CME1 4RV9A 2G2KA 1YUAA 1X0TA 1W2BY 3S16I 2IZ3A 3PO2I 3S1MI 2PMZA 1S72Z 2JA7I 4MXUA 2V45A 4E2ZA 3CCQZ 1S721 2OOYB 5T64A 1ZB9A 1VQ7Z 4RVHA 1VQ71 3FQMA 1SIWA 3J81b 4A3II 1VQOZ 3CC4Z 3MZLB 4HH4A 1KD11 1JWHC 1VQO1 3CC41 3NDIA 3GTMS 1QVGY 4RVGA 1SFOI 2O53A 4HGZA 4E2XA 1KRLA 1S7MA 3G71Z 2NVYI 3D2LA 2BJOA 3G711 1YHQZ 3CQZI 4A3FI 1YI2Z 2PK7A 2F4MA 1VQMZ 1YI21 3CMAZ 4A3EI 1VQM1 4Y52I 3U50C 1DL6A 3H3VJ 1KD12 3HOUI 1RO2A 1I50I 4NB9A 2E2JI 2K5RA 2V8JA 4MH4A 4A3BI 3ESWA 3I56Z 2VPYA 4NBDA 3S1NI 1ZH1A 3I561 3RZDI 2JMOA 1Q861 5IT9b 3D9XA 1ZB8A 1VQ5Z 3GTPI 2JIRA 1VQ51 3CCEZ 4MD7A 3D6WA 3NFZA 3NH4A 1R9TI 3CCE1 2Q51A 3VB9A 4DK1A 4DGLA 3IFUA 3M4OI 1NP6A 1TWGI 2GTIA 1VQP1 1YUKA 4BBSI 1W2BZ 3CCUZ 3CCU1 4NFRA 2JIPA 1YJ9Z 2VPWA 2HU9A 2QKDA 4MRIA 3PO3S 1TWFI 1YJ91 2OOXB 1WJ2A 2RHBA 1M901 4NB8A 1RO4A 3OW2Y 4QTUA 1TFIA 1QF8A 1TWAI 2R92I 2E2II 2E9HA 2KPIA 4A3GI 2GTHA 3EEDA 3FQQA 1P9NA 1QXFA 3GTGI 2JR6A 4NBAA 5A2Qb 2Q4ZA 3G6EZ 5D1OB 4E30A 3G6E1 3S2DI 3FKII 2P3YA 4RS4A 2LFUA 3J81f 5D1OA 5T6BA 1QYPA 4E31A 1M902 1Q16A 3CCQ1 1N2FA 2RPRA 2LIYA 1USPB 2J6AA 1RLYA 3S15I 2OTLZ 5IP7I 3CCSZ 1VQ6Z 1WZNA 1USPA 3CCS1 4BY7I 3GKQA 2OZKA 3G4SZ 2JUBA 2M48A 1RQFA 3GTOI 1K8A1 3G4S1 2DE5A 2M6NA 1YJNZ 4A3JI 4E33A 1YJN1 2B63I 2QEXZ 2WAQA 1M1K1 4AYBA 1YHQ1 1WW9A 1I3QI 2VPZA 2DE7A 2W03A 4S1TA 1Z01A 3CMA1 3GTLI 3GTMI 1TWHI 1K8A2 3CD6Z 2H85A 4E32A
chains in the Genus database with same CATH topology

5IT9f 3CC7Z 3CD61 4MD8A 3CC71 3CCVZ 1M1K2 4EWCA 3KIFA 2RIQA 2JA6I 3CCV1 3S1QI 2JA8I 3VMGA 1WIIA 3GTJI 1LQLA 2R6MA 5AN9F 3CCRZ 5C4JI 3OW2Z 3CCR1 4A3CI 1K83I 1K731 2Y0SA 1YIJZ 3TDHB 2KI7B 5LL6f 2WB1A 4E2WA 1YIJ1 5FLMI 3GCFA 2JA5I 5D1PA 3F3FC 3LUSA 3CCMZ 5IP9I 2EGTA 3CCM1 3S14I 1L1OC 2YADA 2QA4Z 3BG0B 1YITZ 1K732 2DE6A 3S1RI 2QA41 2QLVB 3RZOI 1YIT1 2RBLA 2F4OA 1Y1VS 5A2Qf 1Y1WI 1RO0A 1NUIA 3HOXI 1Q811 4DQYB 1KQSZ 1JJ2Z 3M3YI 3K7AI 1YJWZ 3VTNA 4NBCA 4NBGA 1YJW1 2GU2A 3PO3I 2IZ4A 3CPWZ 3I4MI 2W04A 1NJI1 3F3PC 2I3CA 1QVFZ 3I07A 3IF8A 2RT9A 3HKZA 1ML8A 2K3RA 2QRCB 2OTL1 1VQ61 4X6AI 3H0GI 3QWUA 1Q812 1RNIA 4RVDA 3I55Z 1K9M1 1KQSY 3GTKI 2VF1A 1JJ2Y 4Y7NI 3I551 1VQKZ 1PFTA 3P5JB 3CC2Z 2O4HA 1VQK1 3HOWI 3CC21 2QEX1 1Z02A 4NH1C 1NJI2 4A3LI 3JAMf 3CPWY 5FLXf 5C4XI 4E2YA 1QVFY 1VQ9Z 3MZKB 2NVXI 3HOZI 1VQ91 5T67A 1N8R1 4TNUA 3JAMb 3GTQI 5FLXb 1Q7Y1 3BG1B 2V8IA 1VQLZ 2P28A 4A93I 1K9M2 4NOZA 1VQL1 4BY1I 1X3ZA 4MD9A 3VMHA 1VQ8Z 1VQNZ 3I4NI 4A3MI 2VUGA 1VQ81 1VQN1 2R93I 2QREB 2VUMI 2ZAEB 4NBFA 3TE5B 1Q821 2PM9A 4BXXI 3S17I 2QR1B 5C3EI 1KC81 1VQ4Z 2JNYA 4A3KI 5C44I 4HGYA 2E2HI 2R7ZI 1VQ41 3IX0A 1N8R2 3HOYI 4NBBA 1Q7Y2 4XX2A 3CXCZ 1X3WA 1TWCI 4CL1A 4NBHA 2NVTI 3Q87A 1Q822 3NH5A 1KC82 3HOVI 2YU9I 1VQPZ 2NVQI 1Z03A 3KIHA 2QRDB 3EERA 3S2HI 3VMIA 3CXCY 1Q862 3NDJA 1WCMI 3NH8A 3CCJZ 3J7A4 3CCJ1 4MONA 3T4NB 4BBRI 3J80f 2AKLA 2V8KA 2JS4A 1VLAA 3CCLZ 2OTJZ 4QTTA 5CM2M 3MONA 3CCL1 2OTJ1 4A3DI 3J80b 4NBEA 3CMEZ 1I6HI 4RVFA 1QVGZ 1Y1VI 2HF1A 3CME1 4RV9A 2G2KA 1YUAA 1X0TA 1W2BY 3S16I 2IZ3A 3PO2I 3S1MI 2PMZA 1S72Z 2JA7I 4MXUA 4E2ZA 3CCQZ 1S721 2OOYB 5T64A 1ZB9A 1VQ7Z 4RVHA 1VQ71 3FQMA 3J81b 4A3II 1VQOZ 3CC4Z 3MZLB 4HH4A 1KD11 1JWHC 1VQO1 3CC41 3NDIA 3GTMS 1QVGY 4RVGA 1SFOI 2O53A 4HGZA 4E2XA 1KRLA 1S7MA 3G71Z 2NVYI 2BJOA 3G711 1YHQZ 3CQZI 4A3FI 1YI2Z 2PK7A 2F4MA 1VQMZ 1YI21 3CMAZ 4A3EI 1VQM1 4Y52I 3U50C 1DL6A 3H3VJ 1KD12 3HOUI 1RO2A 1I50I 4NB9A 2E2JI 2K5RA 2V8JA 4MH4A 4A3BI 3ESWA 3I56Z 4NBDA 3S1NI 1ZH1A 3I561 3RZDI 2JMOA 1Q861 5IT9b 3D9XA 1ZB8A 1VQ5Z 3GTPI 1VQ51 3CCEZ 4MD7A 3D6WA 3NFZA 3NH4A 1R9TI 3CCE1 2Q51A 3VB9A 4DK1A 4DGLA 3IFUA 3M4OI 1NP6A 1TWGI 2GTIA 1VQP1 1YUKA 4BBSI 1W2BZ 3CCUZ 3CCU1 4NFRA 1YJ9Z 2HU9A 2QKDA 4MRIA 3PO3S 1TWFI 1YJ91 2OOXB 2RHBA 1M901 4NB8A 1RO4A 3OW2Y 4QTUA 1TFIA 1QF8A 1TWAI 2R92I 2E2II 2E9HA 2KPIA 4A3GI 2GTHA 3EEDA 3FQQA 1P9NA 3GTGI 2JR6A 4NBAA 5A2Qb 2Q4ZA 3G6EZ 5D1OB 4E30A 3G6E1 3S2DI 3FKII 2P3YA 4RS4A 2LFUA 3J81f 5D1OA 5T6BA 1QYPA 4E31A 1M902 3CCQ1 1N2FA 2RPRA 2LIYA 1USPB 2J6AA 1RLYA 3S15I 2OTLZ 5IP7I 3CCSZ 1VQ6Z 1USPA 3CCS1 4BY7I 3GKQA 2OZKA 3G4SZ 2JUBA 2M48A 1RQFA 3GTOI 1K8A1 3G4S1 2DE5A 2M6NA 1YJNZ 4A3JI 4E33A 1YJN1 2B63I 2QEXZ 2WAQA 1M1K1 4AYBA 1YHQ1 1WW9A 1I3QI 2DE7A 2W03A 4S1TA 1Z01A 3CMA1 3GTLI 3GTMI 1TWHI 1K8A2 3CD6Z 2H85A 4E32A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1PFT A;  3M4O I;  3HOW I;  1VLA A;  1TWG I;  4QTT A;  5CM2 M;  4A3L I;  4A3D I;  4BBS I;  4NBE A;  1I6H I;  1Y1V I;  2HF1 A;  2JA6 I;  3S1Q I;  5C4X I;  2JA8 I;  3VMG A;  3GTJ I;  1LQL A;  1YUA A;  3S16 I;  2NVX I;  5C4J I;  3PO2 I;  3HOZ I;  3S1M I;  2JA7 I;  3PO3 S;  1TWF I;  3GTQ I;  4A3C I;  1K83 I;  4NB8 A;  1RO4 A;  4QTU A;  4A93 I;  1TFI A;  1ZB9 A;  5FLM I;  4NOZ A;  1TWA I;  4BY1 I;  2R92 I;  1X3Z A;  3GCF A;  2E2I I;  2JA5 I;  2KPI A;  3VMH A;  3I4N I;  4A3G I;  4A3M I;  2R93 I;  4A3I I;  2VUM I;  3LUS A;  4NBF A;  3GTG I;  2JR6 A;  5IP9 I;  3GTM S;  4NBA A;  1SFO I;  4BXX I;  3S17 I;  5C3E I;  3S14 I;  1L1O C;  2JNY A;  4A3K I;  5C44 I;  2E2H I;  2R7Z I;  3S2D I;  3FKI I;  2P3Y A;  2NVY I;  2BJO A;  3HOY I;  4NBB A;  1QYP A;  2DE6 A;  3S1R I;  3CQZ I;  4A3F I;  3RZO I;  1N2F A;  4XX2 A;  2RBL A;  2F4O A;  2PK7 A;  1X3W A;  2F4M A;  1USP B;  2J6A A;  1RLY A;  1Y1V S;  1TWC I;  1Y1W I;  3S15 I;  4NBH A;  5IP7 I;  4A3E I;  1USP A;  1NUI A;  4Y52 I;  3HOX I;  3U50 C;  1DL6 A;  4BY7 I;  3H3V J;  2NVT I;  3GKQ A;  3M3Y I;  3K7A I;  3Q87 A;  3HOU I;  1I50 I;  4NB9 A;  3GTO I;  4NBC A;  2DE5 A;  4NBG A;  2E2J I;  3PO3 I;  3HOV I;  4A3J I;  2YU9 I;  2B63 I;  2K5R A;  4MH4 A;  2NVQ I;  3I4M I;  4A3B I;  3ESW A;  4NBD A;  3S1N I;  1WW9 A;  1I3Q I;  2DE7 A;  3I07 A;  3RZD I;  3EER A;  3S2H I;  3VMI A;  1ML8 A;  1ZB8 A;  1WCM I;  3GTL I;  3GTP I;  4X6A I;  3H0G I;  3GTM I;  3D6W A;  4BBR I;  1R9T I;  2AKL A;  1TWH I;  3VB9 A;  3GTK I;  2JS4 A;  4Y7N I; 
#chains in the Genus database with same CATH topology
 5IT9 f;  3CC7 Z;  3CD6 1;  4MD8 A;  3CC7 1;  3CCV Z;  1M1K 2;  4EWC A;  3KIF A;  2RIQ A;  2JA6 I;  3CCV 1;  3S1Q I;  2JA8 I;  3VMG A;  1WII A;  3GTJ I;  1LQL A;  2R6M A;  5AN9 F;  2IV2 X;  3CCR Z;  5C4J I;  3OW2 Z;  3CCR 1;  4A3C I;  1K83 I;  1K73 1;  2Y0S A;  1YIJ Z;  3TDH B;  2KI7 B;  5LL6 f;  2WB1 A;  4E2W A;  1YIJ 1;  5FLM I;  3GCF A;  2JA5 I;  2V3V A;  5D1P A;  3F3F C;  3LUS A;  3CCM Z;  5IP9 I;  2EGT A;  3CCM 1;  3S14 I;  1L1O C;  2YAD A;  2QA4 Z;  3BG0 B;  1YIT Z;  1K73 2;  2DE6 A;  3S1R I;  2QA4 1;  2JIQ A;  2QLV B;  3RZO I;  1YIT 1;  2RBL A;  2F4O A;  1Y1V S;  5A2Q f;  1Y1W I;  1RO0 A;  2E7Z A;  1NUI A;  2AYD A;  3HOX I;  1Q81 1;  4DQY B;  1KQS Z;  1JJ2 Z;  3M3Y I;  3K7A I;  2NAP A;  1YJW Z;  3VTN A;  4NBC A;  4NBG A;  1YJW 1;  2GU2 A;  1AA6 A;  3PO3 I;  2IZ4 A;  3CPW Z;  3I4M I;  2W04 A;  1NJI 1;  3F3P C;  2I3C A;  1QVF Z;  3I07 A;  3IF8 A;  2RT9 A;  3HKZ A;  1ML8 A;  2K3R A;  2QRC B;  2OTL 1;  1VQ6 1;  4X6A I;  3H0G I;  3QWU A;  1Q81 2;  1RNI A;  4RVD A;  3I55 Z;  1K9M 1;  1KQS Y;  3GTK I;  2VF1 A;  1JJ2 Y;  4Y7N I;  3I55 1;  1VQK Z;  1PFT A;  3P5J B;  3CC2 Z;  2O4H A;  1VQK 1;  3HOW I;  3CC2 1;  2QEX 1;  1Z02 A;  4NH1 C;  1NJI 2;  4A3L I;  3JAM f;  3CPW Y;  5FLX f;  5C4X I;  4E2Y A;  1QVF Y;  1VQ9 Z;  2VPX A;  3MZK B;  2NVX I;  2JIO A;  3HOZ I;  1VQ9 1;  5T67 A;  1N8R 1;  4TNU A;  3JAM b;  3GTQ I;  5FLX b;  1Q7Y 1;  3BG1 B;  1FDI A;  2V8I A;  1VQL Z;  2P28 A;  4A93 I;  1K9M 2;  4NOZ A;  1VQL 1;  4BY1 I;  1X3Z A;  4MD9 A;  3VMH A;  1VQ8 Z;  1VQN Z;  3I4N I;  4A3M I;  2VUG A;  1VQ8 1;  1VQN 1;  2R93 I;  2QRE B;  2VUM I;  2ZAE B;  4NBF A;  3TE5 B;  1Q82 1;  2PM9 A;  4BXX I;  3S17 I;  2QR1 B;  5C3E I;  1KC8 1;  1VQ4 Z;  2JNY A;  4A3K I;  5C44 I;  4HGY A;  2E2H I;  2R7Z I;  1VQ4 1;  3IX0 A;  1N8R 2;  3HOY I;  4NBB A;  1Q7Y 2;  4XX2 A;  3CXC Z;  1X3W A;  1TWC I;  4CL1 A;  4NBH A;  2NVT I;  3Q87 A;  1Y8C A;  1Q82 2;  3NH5 A;  1KC8 2;  3HOV I;  2YU9 I;  1FDO A;  1VQP Z;  2NVQ I;  1Z03 A;  3KIH A;  2QRD B;  2JIM A;  3EER A;  3S2H I;  3VMI A;  3CXC Y;  1Q86 2;  3NDJ A;  1WCM I;  3NH8 A;  3CCJ Z;  3J7A 4;  3CCJ 1;  4MON A;  3T4N B;  4BBR I;  2LEX A;  3J80 f;  2AKL A;  2V8K A;  2JS4 A;  3IR7 A;  1VLA A;  3CCL Z;  2OTJ Z;  4QTT A;  5CM2 M;  3MON A;  3CCL 1;  2OTJ 1;  4A3D I;  3J80 b;  4NBE A;  3CME Z;  1I6H I;  4RVF A;  1QVG Z;  1Y1V I;  2HF1 A;  3CME 1;  4RV9 A;  2G2K A;  1YUA A;  1X0T A;  1W2B Y;  3S16 I;  2IZ3 A;  3PO2 I;  3S1M I;  2PMZ A;  1S72 Z;  2JA7 I;  4MXU A;  2V45 A;  4E2Z A;  3CCQ Z;  1S72 1;  2OOY B;  5T64 A;  1ZB9 A;  1VQ7 Z;  4RVH A;  1VQ7 1;  3FQM A;  1SIW A;  3J81 b;  4A3I I;  1VQO Z;  3CC4 Z;  3MZL B;  4HH4 A;  1KD1 1;  1JWH C;  1VQO 1;  3CC4 1;  3NDI A;  3GTM S;  1QVG Y;  4RVG A;  1SFO I;  2O53 A;  4HGZ A;  4E2X A;  1KRL A;  1S7M A;  3G71 Z;  2NVY I;  3D2L A;  2BJO A;  3G71 1;  1YHQ Z;  3CQZ I;  4A3F I;  1YI2 Z;  2PK7 A;  2F4M A;  1VQM Z;  1YI2 1;  3CMA Z;  4A3E I;  1VQM 1;  4Y52 I;  3U50 C;  1DL6 A;  3H3V J;  1KD1 2;  3HOU I;  1RO2 A;  1I50 I;  4NB9 A;  2E2J I;  2K5R A;  2V8J A;  4MH4 A;  4A3B I;  3ESW A;  3I56 Z;  2VPY A;  4NBD A;  3S1N I;  1ZH1 A;  3I56 1;  3RZD I;  2JMO A;  1Q86 1;  5IT9 b;  3D9X A;  1ZB8 A;  1VQ5 Z;  3GTP I;  2JIR A;  1VQ5 1;  3CCE Z;  4MD7 A;  3D6W A;  3NFZ A;  3NH4 A;  1R9T I;  3CCE 1;  2Q51 A;  3VB9 A;  4DK1 A;  4DGL A;  3IFU A;  3M4O I;  1NP6 A;  1TWG I;  2GTI A;  1VQP 1;  1YUK A;  4BBS I;  1W2B Z;  3CCU Z;  3CCU 1;  4NFR A;  2JIP A;  1YJ9 Z;  2VPW A;  2HU9 A;  2QKD A;  4MRI A;  3PO3 S;  1TWF I;  1YJ9 1;  2OOX B;  1WJ2 A;  2RHB A;  1M90 1;  4NB8 A;  1RO4 A;  3OW2 Y;  4QTU A;  1TFI A;  1QF8 A;  1TWA I;  2R92 I;  2E2I I;  2E9H A;  2KPI A;  4A3G I;  2GTH A;  3EED A;  3FQQ A;  1P9N A;  1QXF A;  3GTG I;  2JR6 A;  4NBA A;  5A2Q b;  2Q4Z A;  3G6E Z;  5D1O B;  4E30 A;  3G6E 1;  3S2D I;  3FKI I;  2P3Y A;  4RS4 A;  2LFU A;  3J81 f;  5D1O A;  5T6B A;  1QYP A;  4E31 A;  1M90 2;  1Q16 A;  3CCQ 1;  1N2F A;  2RPR A;  2LIY A;  1USP B;  2J6A A;  1RLY A;  3S15 I;  2OTL Z;  5IP7 I;  3CCS Z;  1VQ6 Z;  1WZN A;  1USP A;  3CCS 1;  4BY7 I;  3GKQ A;  2OZK A;  3G4S Z;  2JUB A;  2M48 A;  1RQF A;  3GTO I;  1K8A 1;  3G4S 1;  2DE5 A;  2M6N A;  1YJN Z;  4A3J I;  4E33 A;  1YJN 1;  2B63 I;  2QEX Z;  2WAQ A;  1M1K 1;  4AYB A;  1YHQ 1;  1WW9 A;  1I3Q I;  2VPZ A;  2DE7 A;  2W03 A;  4S1T A;  1Z01 A;  3CMA 1;  3GTL I;  3GTM I;  1TWH I;  1K8A 2;  3CD6 Z;  2H85 A;  4E32 A; 
#chains in the Genus database with same CATH homology
 5IT9 f;  3CC7 Z;  3CD6 1;  4MD8 A;  3CC7 1;  3CCV Z;  1M1K 2;  4EWC A;  3KIF A;  2RIQ A;  2JA6 I;  3CCV 1;  3S1Q I;  2JA8 I;  3VMG A;  1WII A;  3GTJ I;  1LQL A;  2R6M A;  5AN9 F;  3CCR Z;  5C4J I;  3OW2 Z;  3CCR 1;  4A3C I;  1K83 I;  1K73 1;  2Y0S A;  1YIJ Z;  3TDH B;  2KI7 B;  5LL6 f;  2WB1 A;  4E2W A;  1YIJ 1;  5FLM I;  3GCF A;  2JA5 I;  5D1P A;  3F3F C;  3LUS A;  3CCM Z;  5IP9 I;  2EGT A;  3CCM 1;  3S14 I;  1L1O C;  2YAD A;  2QA4 Z;  3BG0 B;  1YIT Z;  1K73 2;  2DE6 A;  3S1R I;  2QA4 1;  2QLV B;  3RZO I;  1YIT 1;  2RBL A;  2F4O A;  1Y1V S;  5A2Q f;  1Y1W I;  1RO0 A;  1NUI A;  3HOX I;  1Q81 1;  4DQY B;  1KQS Z;  1JJ2 Z;  3M3Y I;  3K7A I;  1YJW Z;  3VTN A;  4NBC A;  4NBG A;  1YJW 1;  2GU2 A;  3PO3 I;  2IZ4 A;  3CPW Z;  3I4M I;  2W04 A;  1NJI 1;  3F3P C;  2I3C A;  1QVF Z;  3I07 A;  3IF8 A;  2RT9 A;  3HKZ A;  1ML8 A;  2K3R A;  2QRC B;  2OTL 1;  1VQ6 1;  4X6A I;  3H0G I;  3QWU A;  1Q81 2;  1RNI A;  4RVD A;  3I55 Z;  1K9M 1;  1KQS Y;  3GTK I;  2VF1 A;  1JJ2 Y;  4Y7N I;  3I55 1;  1VQK Z;  1PFT A;  3P5J B;  3CC2 Z;  2O4H A;  1VQK 1;  3HOW I;  3CC2 1;  2QEX 1;  1Z02 A;  4NH1 C;  1NJI 2;  4A3L I;  3JAM f;  3CPW Y;  5FLX f;  5C4X I;  4E2Y A;  1QVF Y;  1VQ9 Z;  3MZK B;  2NVX I;  3HOZ I;  1VQ9 1;  5T67 A;  1N8R 1;  4TNU A;  3JAM b;  3GTQ I;  5FLX b;  1Q7Y 1;  3BG1 B;  2V8I A;  1VQL Z;  2P28 A;  4A93 I;  1K9M 2;  4NOZ A;  1VQL 1;  4BY1 I;  1X3Z A;  4MD9 A;  3VMH A;  1VQ8 Z;  1VQN Z;  3I4N I;  4A3M I;  2VUG A;  1VQ8 1;  1VQN 1;  2R93 I;  2QRE B;  2VUM I;  2ZAE B;  4NBF A;  3TE5 B;  1Q82 1;  2PM9 A;  4BXX I;  3S17 I;  2QR1 B;  5C3E I;  1KC8 1;  1VQ4 Z;  2JNY A;  4A3K I;  5C44 I;  4HGY A;  2E2H I;  2R7Z I;  1VQ4 1;  3IX0 A;  1N8R 2;  3HOY I;  4NBB A;  1Q7Y 2;  4XX2 A;  3CXC Z;  1X3W A;  1TWC I;  4CL1 A;  4NBH A;  2NVT I;  3Q87 A;  1Q82 2;  3NH5 A;  1KC8 2;  3HOV I;  2YU9 I;  1VQP Z;  2NVQ I;  1Z03 A;  3KIH A;  2QRD B;  3EER A;  3S2H I;  3VMI A;  3CXC Y;  1Q86 2;  3NDJ A;  1WCM I;  3NH8 A;  3CCJ Z;  3J7A 4;  3CCJ 1;  4MON A;  3T4N B;  4BBR I;  3J80 f;  2AKL A;  2V8K A;  2JS4 A;  1VLA A;  3CCL Z;  2OTJ Z;  4QTT A;  5CM2 M;  3MON A;  3CCL 1;  2OTJ 1;  4A3D I;  3J80 b;  4NBE A;  3CME Z;  1I6H I;  4RVF A;  1QVG Z;  1Y1V I;  2HF1 A;  3CME 1;  4RV9 A;  2G2K A;  1YUA A;  1X0T A;  1W2B Y;  3S16 I;  2IZ3 A;  3PO2 I;  3S1M I;  2PMZ A;  1S72 Z;  2JA7 I;  4MXU A;  4E2Z A;  3CCQ Z;  1S72 1;  2OOY B;  5T64 A;  1ZB9 A;  1VQ7 Z;  4RVH A;  1VQ7 1;  3FQM A;  3J81 b;  4A3I I;  1VQO Z;  3CC4 Z;  3MZL B;  4HH4 A;  1KD1 1;  1JWH C;  1VQO 1;  3CC4 1;  3NDI A;  3GTM S;  1QVG Y;  4RVG A;  1SFO I;  2O53 A;  4HGZ A;  4E2X A;  1KRL A;  1S7M A;  3G71 Z;  2NVY I;  2BJO A;  3G71 1;  1YHQ Z;  3CQZ I;  4A3F I;  1YI2 Z;  2PK7 A;  2F4M A;  1VQM Z;  1YI2 1;  3CMA Z;  4A3E I;  1VQM 1;  4Y52 I;  3U50 C;  1DL6 A;  3H3V J;  1KD1 2;  3HOU I;  1RO2 A;  1I50 I;  4NB9 A;  2E2J I;  2K5R A;  2V8J A;  4MH4 A;  4A3B I;  3ESW A;  3I56 Z;  4NBD A;  3S1N I;  1ZH1 A;  3I56 1;  3RZD I;  2JMO A;  1Q86 1;  5IT9 b;  3D9X A;  1ZB8 A;  1VQ5 Z;  3GTP I;  1VQ5 1;  3CCE Z;  4MD7 A;  3D6W A;  3NFZ A;  3NH4 A;  1R9T I;  3CCE 1;  2Q51 A;  3VB9 A;  4DK1 A;  4DGL A;  3IFU A;  3M4O I;  1NP6 A;  1TWG I;  2GTI A;  1VQP 1;  1YUK A;  4BBS I;  1W2B Z;  3CCU Z;  3CCU 1;  4NFR A;  1YJ9 Z;  2HU9 A;  2QKD A;  4MRI A;  3PO3 S;  1TWF I;  1YJ9 1;  2OOX B;  2RHB A;  1M90 1;  4NB8 A;  1RO4 A;  3OW2 Y;  4QTU A;  1TFI A;  1QF8 A;  1TWA I;  2R92 I;  2E2I I;  2E9H A;  2KPI A;  4A3G I;  2GTH A;  3EED A;  3FQQ A;  1P9N A;  3GTG I;  2JR6 A;  4NBA A;  5A2Q b;  2Q4Z A;  3G6E Z;  5D1O B;  4E30 A;  3G6E 1;  3S2D I;  3FKI I;  2P3Y A;  4RS4 A;  2LFU A;  3J81 f;  5D1O A;  5T6B A;  1QYP A;  4E31 A;  1M90 2;  3CCQ 1;  1N2F A;  2RPR A;  2LIY A;  1USP B;  2J6A A;  1RLY A;  3S15 I;  2OTL Z;  5IP7 I;  3CCS Z;  1VQ6 Z;  1USP A;  3CCS 1;  4BY7 I;  3GKQ A;  2OZK A;  3G4S Z;  2JUB A;  2M48 A;  1RQF A;  3GTO I;  1K8A 1;  3G4S 1;  2DE5 A;  2M6N A;  1YJN Z;  4A3J I;  4E33 A;  1YJN 1;  2B63 I;  2QEX Z;  2WAQ A;  1M1K 1;  4AYB A;  1YHQ 1;  1WW9 A;  1I3Q I;  2DE7 A;  2W03 A;  4S1T A;  1Z01 A;  3CMA 1;  3GTL I;  3GTM I;  1TWH I;  1K8A 2;  3CD6 Z;  2H85 A;  4E32 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

4A3CI

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations