4JI0 | Genus

Total Genus 24

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	24
sequence length	127
structure length	127
Chain Sequence	EQYYGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALEPLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRAPQYSKR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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Viewer cachePut cache://localLOAD_/file/5d02854504621af6c1d12d3c/pdb.gz

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The Resolver thinks Pdb

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Time for openFile(/file/5d02854504621af6c1d12d3c/pdb.gz): 1252 ms

reading 127 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

127 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 18 ms

Adding embedded #jmolscript: select ({0:126});backbone only;select *;

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Ribosome
publication title	The central role of protein S12 in organizing the structure of the decoding site of the ribosome. pubmed doi rcsb
molecule keywords	16S rRNA
total genus	24
structure length	127
sequence length	127
ec nomenclature
pdb deposition date	2013-03-05

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF00380	Ribosomal_S9	Ribosomal protein S9/S16

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5; domain 2	Ribosomal Protein S5; domain 2	4ji0I00

1EI1A 4FWHA 4K0KE 1NHIA 4LF7I 2UUCI 2ZBKB 1IBME 4K0KI 2UXDI 3OTOE 1KTVA 1IBMI 4JI4E 2VQEI 4DV4E 4DPUA 4P52A 2VF3A 5A2QC 4HXZA 1NHHA 4DR7I 1XMQE 5L3JA 2BM0A 3LNUA 1ZXMA 4USMA 4DV4I 4DR1E 4LF9E 3PYGA 1FWLA 4X64E 4DUYE 4DV5E 4LF6E 1FI4A 1EA6A 2WW4A 3J80C 3V2UC 1U2RA 1ZM3A 5A2QQ 3GONA 4LF9I 2UUBE 4DUYI 4DV5I 4LF6I 4NXNE 4B3TE 1A6FA 4DV0E 2HK3A 4DR6E 1XNQI 4DV1E 2HFSA 4DV0I 4B3SE 4HACB 4FWDA 4DV1I 1N34E 4DR2E 2ZITA 2R42A 1D6TA 1HNXE 4MYTA 4JG4A 4WUCA 1N34I 4DR2I 4Z7YA 2UUAE 2BM1A 3PYFA 4PU9A 2HFUA 4JI1E 1Z5AA 4KQVA 3HULA 4JI1I 2NPFA 3CWVA 4DR3E 4X65I 1N36E 3M6AA 1Z0CA 2V2VA 3B8HA 1N36I 3B82A 1FWKA 4UTGA 3QT6A 1PVGA 1H7UA 1FJGI 4DXLA 1B62A 1N32I 4LF5I 1KVKA 5FLXQ 2UXBE 4JV5E 2HK2A 1XNRI 4JI6I 4LF7E 2UUCE 3WU5A 4ED4A 4PRVA 2UXBI 4DPWA 4JV5I 1ZM4A 5GMEA 4JI8I 1FNMA 2UXDE 1IBLE 2VQEE 1XMOE 4DR4I 4DR7E 3PYDA 4DU7A 2VQFE 1IBLI 4I3HA 4USKA 1XMOI 2LJPA 1HR0E 2VQFI 3F0NA 1J5EI 2A2DA 3J7AM 3PYEA 3WU6A 3ZZ0A 1HR0I 3ZKBA 3K1JA 2GS8A 4HACA 3LTOA 4GKKI 2UXCI 4X62I 1XNQE 4YHHI 1Z0WA 3T1HE 3QT7A 1N0VC 3J81C 1VISA 4DPTA 4MYUA 1KKHA 3J80Q 3T1HI 3T1YI 4B3RI 3K17A 4XTJA 3WU3A 4JI5E 2J7KA 4RPFA 4JI5I 5LL6R 2Q2EB 2BV3A 1Z59A 5BR8I 1Z5CA 2V2ZA 4X66E 3Q1QA 2ZM6E 3B78A 3H4LA 1PIEA 1QZRA 2AJ4A 2EFGA 4LF4I 4DV6I 2CZ9A 4X65E 4X66I 2ZM6I 1KIJA 3JAMC 1MU5A 1Z0GA 4WUDA 4AQYE 2DEIA 1N33E 4GKJE 4NXMI 4AQYI 4JI3E 1HNWE 1N33I 3WU4A 1FJGE 5LMNE 1N32E 4LF5E 4DPXA 4DV2I 1PKPA 4M1KA 1XHKA 1Z0EA 1H73A 1OJ4A 4LFCI 4OX9I 4HY1A 4GKJI 2E5LI 4JI3I 1HNWI 1XNRE 1IBKI 4JI6E 3LPSA 5LMNI 4JI2E 1Z0VA 1DARA 1NZ0A 4JI8E 1HNZI 1B63A 4LFAI 4DV7I 4Z7CA 4JI2I 4FWGA 4JI0E 4R1FA 3QT5A 4KHPI 1UEKA 4DR4E 4DU8A 4JI0I 5IWAI 2R3VA 4EMDA 1H7SA 2DEJA 1J5EE 4DV3I 2X7IA 2UU9E 5LMUE 4GKKE 2UXCE 4X62E 4LFBE 3D4JA 4YHHE 1ZXNA 2UU9I 5LMUI 1RR9A 1MX0A 4LFBI 4FN5A 4YY3E 4UT4A 3T1YE 3OTOI 4B3RE 4DR5E 4JI4I 1ELOA 4YY3I 1XMQI 4JYAE 1Z5BA 4DR5I 4DPYA 4DR1I 2OI2A 4X64I 3J7AG 1N0UA 3J81Q 4JYAI 5BR8E 2V8PA 2X36A 5GMDA 2A2CA 2UUBI 4NXNI 4B3TI 3V5RA 4DR6I 4LF4E 4DV6E 1RREA 3ZZTA 4B3ME 2HHHE 4DUZE 2XEXA 4B3SI 4FW9A 3ZM7A 5IT9C 4B3MI 1I94E 2HHHI 1H74A 4NXME 4DUZI 1MG7A 4P7AA 4DV2E 3ZKDA 1I94I 4WUBA 4LFCE 4OX9E 2F4VE 2E5LE 2V2QA 1HNXI 1IBKE 1S4EA 4LF8E 4URLA 5IT9Q 1S16A 3JAMQ 3ZZUA 4JI7E 2HKJA 2UUAI 2F4VI 2HKEA 1Z0TA 1HNZE 4LFAE 4DV7E 4LF8I 1BKNA 4JI7I 1FKAE 2V34A 5FLXC 4ZVIA 4KHPE 1K47A 2E1RA 1Z0BA 4DR3I 5IWAE 1H72C 1ZM2A 1NHJA 4DV3E 1ZM9A 3QT8A 4PRXA 4HYMA 1WUUA
chains in the Genus database with same CATH superfamily

1EI1A 4MU3A 3PRYA 4FWHA 4K0KE 1NHIA 1OYSA 4LF7I 1VI7A 2UUCI 2JE6A 2ZBKB 4MDTA 2JEBA 1IBME 4K0KI 2IOPA 3Q6NA 2UXDI 4IZKA 3OTOE 1KTVA 5K36C 4U3DA 1IBMI 4JI4E 2VQEI 4DV4E 4DPUA 4P52A 2VF3A 5A2QC 4HXZA 1NHHA 4DR7I 1XMQE 5JEAD 5L3JA 2BM0A 3LNUA 1ZXMA 4BA1B 4USMA 4DV4I 4DR1E 4LF9E 3P3CA 1FWLA 3PYGA 4MQYA 4X64E 4DUYE 4DV5E 4LF6E 1FI4A 1EA6A 2WW4A 2Z5EA 3J80C 3V2UC 1U2RA 1ZM3A 2CGEA 5A2QQ 3GONA 2C39A 4LF9I 4AM3A 2UUBE 4DUYI 4DV5I 4LF6I 4NXNE 4B3TE 1A6FA 2Z5BB 5DNLA 4DV0E 2HK3A 5EKWA 4DR6E 4OO1C 2NN6F 1XNQI 3B4TA 1RHYA 2C38B 4OZEA 5JEAA 4DV1E 2HFSA 4DV0I 4B3SE 4MU0A 2WP8A 4AIMA 1E3HA 4HACB 4FWDA 2J65A 4DV1I 5C0XF 3HKMA 1N34E 4DR2E 2ZITA 2R42A 1D6TA 3DD6A 1HNXE 4MYTA 4JG4A 4WUCA 1N34I 4DR2I 4Z7YA 2UUAE 2BM1A 3PYFA 4PU9A 5K36F 2BA1D 2HFUA 4JI1E 1Z5AA 1UDQA 4KQVA 4OKGA 2PNZA 2C37B 4GQUA 4BA2B 3HULA 4JI1I 2NPFA 3CWVA 4DR3E 1OYPA 4LOMA 4X65I 1N36E 3M6AA 1Z0CA 2V2VA 4IFDB 2NN6D 3U1KA 3B8HA 1N36I 3B82A 1FWKA 4UTGA 1R6LA 3QT6A 1PVGA 3M85G 2BR2B 1H7UA 4NBQA 1FJGI 4DXLA 1B62A 3KRNA 4LF5I 1N32I 1KVKA 5FLXQ 4OO1F 2UXBE 4JV5E 2HK2A 1XNRI 4JI6I 2PO2B 4LF7E 2UUCE 4IFDF 3WU5A 4ED4A 4PRVA 2UXBI 4DPWA 4JV5I 1ZM4A 2IERA 5GMEA 4JI8I 1FNMA 2UXDE 4IZJD 2NN6A 4U3BA 2PNMA 2Z5CA 1IBLE 2VQEE 1XMOE 5C0XE 4DR4I 4DR7E 5EL9A 3PYDA 4DU7A 2VQFE 2VESA 2JEAA 1IBLI 5C0XA 4FW7A 4USKA 4I3HA 1USVA 2LJPA 1XMOI 1HR0E 2CG9A 2VQFI 2IOQA 3F0NA 1J5EI 2A2DA 4MU4A 2F1DA 3J7AM 3PYEA 3WU6A 3ZZ0A 1HR0I 4IZJA 3ZKBA 1Y60A 5K36E 3K1JA 2GS8A 4HACA 3LTOA 1UDSA 1XXEA 4GKKI 2UXCI 2O1VA 4X62I 2PO1A 1XNQE 4YHHI 5K36A 1Z0WA 3T1HE 3Q6MA 2O1WA 3QT7A 1N0VC 2PO0A 3J81C 1VISA 4DPTA 5DNXA 4MYUA 2JE6B 4FW6A 1KKHA 3J80Q 3T1HI 3CDIA 3T1YI 4B3RI 3UHMA 2JEBB 3K17A 3PS1A 4LCFA 4IFDC 4XTJA 3WU3A 4JI5E 4IZKB 2J7KA 4RPFA 4OO1E 3L7ZA 4JI5I 3M7NG 1OYRA 3P06A 3P3EA 5LL6R 2O1UA 2Q2EB 4OO1A 2BV3A 4IFDE 1Z59A 5BR8I 1Z5CA 2V2ZA 3GMEA 4X66E 3Q1QA 2ZM6E 4N3OA 3B78A 3H4LA 5DRPA 1PIEA 1QZRA 2AJ4A 2EFGA 4LF4I 4DV6I 2CZ9A 2WNRA 4X65E 4X66I 2ZM6I 1KIJA 3JAMC 1MU5A 1Z0GA 4WUDA 4AQYE 2DEIA 2JT2A 1N33E 3P76A 3CDJA 4AIDA 5JEAB 1UDNA 4QNKA 4GKJE 4NXMI 4AQYI 2WP8B 4JI3E 1HNWE 1N33I 3WU4A 1FJGE 5LMNE 1N32E 4LF5E 4DPXA 4DV2I 1PKPA 4M1KA 1XHKA 1Z0EA 1H73A 3U1YA 2BA0G 1OJ4A 4LFCI 4OX9I 4HY1A 4GKJI 2E5LI 4JI3I 1HNWI 1XNRE 1IBKI 4JI6E 3LPSA 5LMNI 4JI2E 5JEAF 1Z0VA 1DARA 5C0XD 1NZ0A 4JI8E 1HNZI 1B63A 5FWKA 4DV7I 4LFAI 3PS3A 4Z7CA 4JI2I 4FWGA 4JI0E 4R1FA 3QT5A 4KHPI 5DRQA 1UEKA 1Y6ZA 4DR4E 4DU8A 4BA1A 3M85D 4JI0I 2PNZB 5IWAI 2R3VA 4EMDA 5K36D 5DROA 1H7SA 1YHCA 2GQ0A 5DRRA 2CVEA 2DEJA 2Z5BA 1J5EE 4FW5A 4DV3I 3GCMA 2X7IA 2UU9E 5LMUE 2C38A 4GKKE 2UXCE 4X62E 4LFBE 1USUA 3D4JA 4YHHE 1ZXNA 4ISAA 2UU9I 1R6MA 5LMUI 1RR9A 1MX0A 4LFBI 4FN5A 4IS9A 4YY3E 4UT4A 2IESA 4OO1D 3T1YE 1HK7A 3OTOI 4B3RE 1P42A 4DR5E 4JI4I 5JEAC 1ELOA 4YY3I 2NN6B 4IFDD 2Z5CB 4FW3A 1XMQI 4QNJA 4JYAE 3PS2A 1Z5BA 4DR5I 4J3DA 4DPYA 4DR1I 1E3PA 2OI2A 3GLLA 2JEAB 4X64I 3J7AG 4LCHA 1N0UA 3J81Q 4JYAI 5C0XB 1Y4UA 5BR8E 5JEAE 2V8PA 2X36A 3HJCA 2C37A 4BA2A 5GMDA 2A2CA 2UUBI 4NXNI 4B3TI 3V5RA 1Y4SA 4DR6I 4LF4E 4DV6E 4IZJB 4IFDA 1RREA 2PNLA 3ZZTA 3P3GA 4B3ME 2HHHE 2BA1G 2PO1B 2C39B 4DUZE 1Y5YA 2XEXA 4B3SI 5K36B 4FW9A 2BR2A 3ZM7A 5IT9C 4B3MI 1I94E 2HHHI 3M7ND 2PO0B 1H74A 4NXME 4DUZI 1MG7A 2GO3A 4P7AA 4DV2E 3ZKDA 4LPFA 2PO2A 1I94I 4WUBA 4LFCE 4OX9E 2F4VE 2E5LE 2V2QA 1HNXI 4FW4A 1IBKE 1S4EA 4LF8E 4URLA 5IT9Q 1S16A 4LCGA 5ELWA 3JAMQ 3ZZUA 4JI7E 2HKJA 2UUAI 2F4VI 3L7ZB 2HKEA 3K85A 1Z0TA 1HNZE 4LFAE 4DV7E 4LF8I 1BKNA 2AE8A 4JI7I 4OO1B 1FKAE 2V34A 5FLXC 4ZVIA 4KHPE 3H1CA 1K47A 2E1RA 1Z0BA 2O1TA 1YH8A 4MU1A 4DR3I 1UDOA 5IWAE 2NN6C 3NZKA 2BA0D 2WNRB 1H72C 1ZM2A 1NHJA 2O3ZA 2GO4A 4DV3E 1ZM9A 3QT8A 4PRXA 5C0XC 4HYMA 1WUUA 2NN6E
chains in the Genus database with same CATH topology

1EI1A 3PRYA 4FWHA 4K0KE 1NHIA 4LF7I 2UUCI 2ZBKB 1IBME 4K0KI 2IOPA 3Q6NA 2UXDI 4IZKA 3OTOE 1KTVA 1IBMI 4JI4E 2VQEI 4DV4E 4DPUA 4P52A 2VF3A 5A2QC 4HXZA 1NHHA 4DR7I 1XMQE 5L3JA 2BM0A 3LNUA 1ZXMA 4USMA 4DV4I 4DR1E 4LF9E 3PYGA 1FWLA 4X64E 4DUYE 4DV5E 4LF6E 1FI4A 1EA6A 2WW4A 2Z5EA 3J80C 3V2UC 1U2RA 1ZM3A 2CGEA 5A2QQ 3GONA 4LF9I 2UUBE 4DUYI 4DV5I 4LF6I 4NXNE 4B3TE 1A6FA 2Z5BB 4DV0E 2HK3A 4DR6E 1XNQI 4DV1E 2HFSA 4DV0I 4B3SE 4HACB 4FWDA 4DV1I 1N34E 4DR2E 2ZITA 2R42A 1D6TA 1HNXE 4MYTA 4JG4A 4WUCA 1N34I 4DR2I 4Z7YA 2UUAE 2BM1A 3PYFA 4PU9A 2HFUA 4JI1E 1Z5AA 4KQVA 3HULA 4JI1I 2NPFA 3CWVA 4DR3E 4X65I 1N36E 3M6AA 1Z0CA 2V2VA 3B8HA 1N36I 3B82A 1FWKA 4UTGA 3QT6A 1PVGA 1H7UA 1FJGI 4DXLA 1B62A 1N32I 4LF5I 1KVKA 5FLXQ 2UXBE 4JV5E 2HK2A 1XNRI 4JI6I 4LF7E 2UUCE 3WU5A 4ED4A 4PRVA 2UXBI 4DPWA 4JV5I 1ZM4A 5GMEA 4JI8I 1FNMA 2UXDE 4IZJD 2PNMA 2Z5CA 1IBLE 2VQEE 1XMOE 4DR4I 4DR7E 3PYDA 4DU7A 2VQFE 1IBLI 4I3HA 4USKA 1XMOI 1USVA 2LJPA 1HR0E 2CG9A 2VQFI 2IOQA 3F0NA 1J5EI 2A2DA 3J7AM 3PYEA 3WU6A 3ZZ0A 1HR0I 4IZJA 3ZKBA 3K1JA 2GS8A 4HACA 3LTOA 4GKKI 2UXCI 2O1VA 4X62I 1XNQE 4YHHI 1Z0WA 3T1HE 3Q6MA 2O1WA 3QT7A 1N0VC 3J81C 1VISA 4DPTA 4MYUA 1KKHA 3J80Q 3T1HI 3T1YI 4B3RI 3K17A 4XTJA 3WU3A 4JI5E 4IZKB 2J7KA 4RPFA 4JI5I 3P06A 5LL6R 2O1UA 2Q2EB 2BV3A 1Z59A 5BR8I 1Z5CA 2V2ZA 4X66E 3Q1QA 2ZM6E 4N3OA 3B78A 3H4LA 1PIEA 1QZRA 2AJ4A 2EFGA 4LF4I 4DV6I 2CZ9A 4X65E 4X66I 2ZM6I 1KIJA 3JAMC 1MU5A 1Z0GA 4WUDA 4AQYE 2DEIA 1N33E 4GKJE 4NXMI 4AQYI 4JI3E 1HNWE 1N33I 3WU4A 1FJGE 5LMNE 1N32E 4LF5E 4DPXA 4DV2I 1PKPA 4M1KA 1XHKA 1Z0EA 1H73A 1OJ4A 4LFCI 4OX9I 4HY1A 4GKJI 2E5LI 4JI3I 1HNWI 1XNRE 1IBKI 4JI6E 3LPSA 5LMNI 4JI2E 1Z0VA 1DARA 1NZ0A 4JI8E 1HNZI 1B63A 5FWKA 4DV7I 4LFAI 4Z7CA 4JI2I 4FWGA 4JI0E 4R1FA 3QT5A 4KHPI 1UEKA 1Y6ZA 4DR4E 4DU8A 4JI0I 5IWAI 2R3VA 4EMDA 1H7SA 2GQ0A 2DEJA 2Z5BA 1J5EE 4DV3I 2X7IA 2UU9E 5LMUE 4GKKE 2UXCE 4X62E 4LFBE 1USUA 3D4JA 4YHHE 1ZXNA 2UU9I 5LMUI 1RR9A 1MX0A 4LFBI 4FN5A 4YY3E 4UT4A 3T1YE 1HK7A 3OTOI 4B3RE 4DR5E 4JI4I 1ELOA 4YY3I 2Z5CB 1XMQI 4JYAE 1Z5BA 4DR5I 4DPYA 4DR1I 2OI2A 4X64I 3J7AG 1N0UA 3J81Q 4JYAI 1Y4UA 5BR8E 2V8PA 2X36A 3HJCA 5GMDA 2A2CA 2UUBI 4NXNI 4B3TI 3V5RA 1Y4SA 4DR6I 4LF4E 4DV6E 4IZJB 1RREA 2PNLA 3ZZTA 4B3ME 2HHHE 4DUZE 2XEXA 4B3SI 4FW9A 3ZM7A 5IT9C 4B3MI 1I94E 2HHHI 1H74A 4NXME 4DUZI 1MG7A 4P7AA 4DV2E 3ZKDA 1I94I 4WUBA 4LFCE 4OX9E 2F4VE 2E5LE 2V2QA 1HNXI 1IBKE 1S4EA 4LF8E 4URLA 5IT9Q 1S16A 3JAMQ 3ZZUA 4JI7E 2HKJA 2UUAI 2F4VI 2HKEA 3K85A 1Z0TA 1HNZE 4LFAE 4DV7E 4LF8I 1BKNA 4JI7I 1FKAE 2V34A 5FLXC 4ZVIA 4KHPE 1K47A 2E1RA 1Z0BA 2O1TA 4DR3I 5IWAE 1H72C 1ZM2A 1NHJA 4DV3E 1ZM9A 3QT8A 4PRXA 4HYMA 1WUUA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1EI1 A;  4FWH A;  4K0K E;  1NHI A;  4LF7 I;  2UUC I;  2ZBK B;  1IBM E;  4K0K I;  2UXD I;  3OTO E;  1KTV A;  1IBM I;  4JI4 E;  2VQE I;  4DV4 E;  4DPU A;  4P52 A;  2VF3 A;  5A2Q C;  4HXZ A;  1NHH A;  4DR7 I;  1XMQ E;  5L3J A;  2BM0 A;  3LNU A;  1ZXM A;  4USM A;  4DV4 I;  4DR1 E;  4LF9 E;  3PYG A;  1FWL A;  4X64 E;  4DUY E;  4DV5 E;  4LF6 E;  1FI4 A;  1EA6 A;  2WW4 A;  3J80 C;  3V2U C;  1U2R A;  1ZM3 A;  5A2Q Q;  3GON A;  4LF9 I;  2UUB E;  4DUY I;  4DV5 I;  4LF6 I;  4NXN E;  4B3T E;  1A6F A;  4DV0 E;  2HK3 A;  4DR6 E;  1XNQ I;  4DV1 E;  2HFS A;  4DV0 I;  4B3S E;  4HAC B;  4FWD A;  4DV1 I;  1N34 E;  4DR2 E;  2ZIT A;  2R42 A;  1D6T A;  1HNX E;  4MYT A;  4JG4 A;  4WUC A;  1N34 I;  4DR2 I;  4Z7Y A;  2UUA E;  2BM1 A;  3PYF A;  4PU9 A;  2HFU A;  4JI1 E;  1Z5A A;  4KQV A;  3HUL A;  4JI1 I;  2NPF A;  3CWV A;  4DR3 E;  4X65 I;  1N36 E;  3M6A A;  1Z0C A;  2V2V A;  3B8H A;  1N36 I;  3B82 A;  1FWK A;  4UTG A;  3QT6 A;  1PVG A;  1H7U A;  1FJG I;  4DXL A;  1B62 A;  1N32 I;  4LF5 I;  1KVK A;  5FLX Q;  2UXB E;  4JV5 E;  2HK2 A;  1XNR I;  4JI6 I;  4LF7 E;  2UUC E;  3WU5 A;  4ED4 A;  4PRV A;  2UXB I;  4DPW A;  4JV5 I;  1ZM4 A;  5GME A;  4JI8 I;  1FNM A;  2UXD E;  1IBL E;  2VQE E;  1XMO E;  4DR4 I;  4DR7 E;  3PYD A;  4DU7 A;  2VQF E;  1IBL I;  4I3H A;  4USK A;  1XMO I;  2LJP A;  1HR0 E;  2VQF I;  3F0N A;  1J5E I;  2A2D A;  3J7A M;  3PYE A;  3WU6 A;  3ZZ0 A;  1HR0 I;  3ZKB A;  3K1J A;  2GS8 A;  4HAC A;  3LTO A;  4GKK I;  2UXC I;  4X62 I;  1XNQ E;  4YHH I;  1Z0W A;  3T1H E;  3QT7 A;  1N0V C;  3J81 C;  1VIS A;  4DPT A;  4MYU A;  1KKH A;  3J80 Q;  3T1H I;  3T1Y I;  4B3R I;  3K17 A;  4XTJ A;  3WU3 A;  4JI5 E;  2J7K A;  4RPF A;  4JI5 I;  5LL6 R;  2Q2E B;  2BV3 A;  1Z59 A;  5BR8 I;  1Z5C A;  2V2Z A;  4X66 E;  3Q1Q A;  2ZM6 E;  3B78 A;  3H4L A;  1PIE A;  1QZR A;  2AJ4 A;  2EFG A;  4LF4 I;  4DV6 I;  2CZ9 A;  4X65 E;  4X66 I;  2ZM6 I;  1KIJ A;  3JAM C;  1MU5 A;  1Z0G A;  4WUD A;  4AQY E;  2DEI A;  1N33 E;  4GKJ E;  4NXM I;  4AQY I;  4JI3 E;  1HNW E;  1N33 I;  3WU4 A;  1FJG E;  5LMN E;  1N32 E;  4LF5 E;  4DPX A;  4DV2 I;  1PKP A;  4M1K A;  1XHK A;  1Z0E A;  1H73 A;  1OJ4 A;  4LFC I;  4OX9 I;  4HY1 A;  4GKJ I;  2E5L I;  4JI3 I;  1HNW I;  1XNR E;  1IBK I;  4JI6 E;  3LPS A;  5LMN I;  4JI2 E;  1Z0V A;  1DAR A;  1NZ0 A;  4JI8 E;  1HNZ I;  1B63 A;  4LFA I;  4DV7 I;  4Z7C A;  4JI2 I;  4FWG A;  4JI0 E;  4R1F A;  3QT5 A;  4KHP I;  1UEK A;  4DR4 E;  4DU8 A;  4JI0 I;  5IWA I;  2R3V A;  4EMD A;  1H7S A;  2DEJ A;  1J5E E;  4DV3 I;  2X7I A;  2UU9 E;  5LMU E;  4GKK E;  2UXC E;  4X62 E;  4LFB E;  3D4J A;  4YHH E;  1ZXN A;  2UU9 I;  5LMU I;  1RR9 A;  1MX0 A;  4LFB I;  4FN5 A;  4YY3 E;  4UT4 A;  3T1Y E;  3OTO I;  4B3R E;  4DR5 E;  4JI4 I;  1ELO A;  4YY3 I;  1XMQ I;  4JYA E;  1Z5B A;  4DR5 I;  4DPY A;  4DR1 I;  2OI2 A;  4X64 I;  3J7A G;  1N0U A;  3J81 Q;  4JYA I;  5BR8 E;  2V8P A;  2X36 A;  5GMD A;  2A2C A;  2UUB I;  4NXN I;  4B3T I;  3V5R A;  4DR6 I;  4LF4 E;  4DV6 E;  1RRE A;  3ZZT A;  4B3M E;  2HHH E;  4DUZ E;  2XEX A;  4B3S I;  4FW9 A;  3ZM7 A;  5IT9 C;  4B3M I;  1I94 E;  2HHH I;  1H74 A;  4NXM E;  4DUZ I;  1MG7 A;  4P7A A;  4DV2 E;  3ZKD A;  1I94 I;  4WUB A;  4LFC E;  4OX9 E;  2F4V E;  2E5L E;  2V2Q A;  1HNX I;  1IBK E;  1S4E A;  4LF8 E;  4URL A;  5IT9 Q;  1S16 A;  3JAM Q;  3ZZU A;  4JI7 E;  2HKJ A;  2UUA I;  2F4V I;  2HKE A;  1Z0T A;  1HNZ E;  4LFA E;  4DV7 E;  4LF8 I;  1BKN A;  4JI7 I;  1FKA E;  2V34 A;  5FLX C;  4ZVI A;  4KHP E;  1K47 A;  2E1R A;  1Z0B A;  4DR3 I;  5IWA E;  1H72 C;  1ZM2 A;  1NHJ A;  4DV3 E;  1ZM9 A;  3QT8 A;  4PRX A;  4HYM A;  1WUU A; 
#chains in the Genus database with same CATH topology
 1EI1 A;  4MU3 A;  3PRY A;  4FWH A;  4K0K E;  1NHI A;  1OYS A;  4LF7 I;  1VI7 A;  2UUC I;  2JE6 A;  2ZBK B;  4MDT A;  2JEB A;  1IBM E;  4K0K I;  2IOP A;  3Q6N A;  2UXD I;  4IZK A;  3OTO E;  1KTV A;  5K36 C;  4U3D A;  1IBM I;  4JI4 E;  2VQE I;  4DV4 E;  4DPU A;  4P52 A;  2VF3 A;  5A2Q C;  4HXZ A;  1NHH A;  4DR7 I;  1XMQ E;  5JEA D;  5L3J A;  2BM0 A;  3LNU A;  1ZXM A;  4BA1 B;  4USM A;  4DV4 I;  4DR1 E;  4LF9 E;  3P3C A;  1FWL A;  3PYG A;  4MQY A;  4X64 E;  4DUY E;  4DV5 E;  4LF6 E;  1FI4 A;  1EA6 A;  2WW4 A;  2Z5E A;  3J80 C;  3V2U C;  1U2R A;  1ZM3 A;  2CGE A;  5A2Q Q;  3GON A;  2C39 A;  4LF9 I;  4AM3 A;  2UUB E;  4DUY I;  4DV5 I;  4LF6 I;  4NXN E;  4B3T E;  1A6F A;  2Z5B B;  5DNL A;  4DV0 E;  2HK3 A;  5EKW A;  4DR6 E;  4OO1 C;  2NN6 F;  1XNQ I;  3B4T A;  1RHY A;  2C38 B;  4OZE A;  5JEA A;  4DV1 E;  2HFS A;  4DV0 I;  4B3S E;  4MU0 A;  2WP8 A;  4AIM A;  1E3H A;  4HAC B;  4FWD A;  2J65 A;  4DV1 I;  5C0X F;  3HKM A;  1N34 E;  4DR2 E;  2ZIT A;  2R42 A;  1D6T A;  3DD6 A;  1HNX E;  4MYT A;  4JG4 A;  4WUC A;  1N34 I;  4DR2 I;  4Z7Y A;  2UUA E;  2BM1 A;  3PYF A;  4PU9 A;  5K36 F;  2BA1 D;  2HFU A;  4JI1 E;  1Z5A A;  1UDQ A;  4KQV A;  4OKG A;  2PNZ A;  2C37 B;  4GQU A;  4BA2 B;  3HUL A;  4JI1 I;  2NPF A;  3CWV A;  4DR3 E;  1OYP A;  4LOM A;  4X65 I;  1N36 E;  3M6A A;  1Z0C A;  2V2V A;  4IFD B;  2NN6 D;  3U1K A;  3B8H A;  1N36 I;  3B82 A;  1FWK A;  4UTG A;  1R6L A;  3QT6 A;  1PVG A;  3M85 G;  2BR2 B;  1H7U A;  4NBQ A;  1FJG I;  4DXL A;  1B62 A;  3KRN A;  4LF5 I;  1N32 I;  1KVK A;  5FLX Q;  4OO1 F;  2UXB E;  4JV5 E;  2HK2 A;  1XNR I;  4JI6 I;  2PO2 B;  4LF7 E;  2UUC E;  4IFD F;  3WU5 A;  4ED4 A;  4PRV A;  2UXB I;  4DPW A;  4JV5 I;  1ZM4 A;  2IER A;  5GME A;  4JI8 I;  1FNM A;  2UXD E;  4IZJ D;  2NN6 A;  4U3B A;  2PNM A;  2Z5C A;  1IBL E;  2VQE E;  1XMO E;  5C0X E;  4DR4 I;  4DR7 E;  5EL9 A;  3PYD A;  4DU7 A;  2VQF E;  2VES A;  2JEA A;  1IBL I;  5C0X A;  4FW7 A;  4USK A;  4I3H A;  1USV A;  2LJP A;  1XMO I;  1HR0 E;  2CG9 A;  2VQF I;  2IOQ A;  3F0N A;  1J5E I;  2A2D A;  4MU4 A;  2F1D A;  3J7A M;  3PYE A;  3WU6 A;  3ZZ0 A;  1HR0 I;  4IZJ A;  3ZKB A;  1Y60 A;  5K36 E;  3K1J A;  2GS8 A;  4HAC A;  3LTO A;  1UDS A;  1XXE A;  4GKK I;  2UXC I;  2O1V A;  4X62 I;  2PO1 A;  1XNQ E;  4YHH I;  5K36 A;  1Z0W A;  3T1H E;  3Q6M A;  2O1W A;  3QT7 A;  1N0V C;  2PO0 A;  3J81 C;  1VIS A;  4DPT A;  5DNX A;  4MYU A;  2JE6 B;  4FW6 A;  1KKH A;  3J80 Q;  3T1H I;  3CDI A;  3T1Y I;  4B3R I;  3UHM A;  2JEB B;  3K17 A;  3PS1 A;  4LCF A;  4IFD C;  4XTJ A;  3WU3 A;  4JI5 E;  4IZK B;  2J7K A;  4RPF A;  4OO1 E;  3L7Z A;  4JI5 I;  3M7N G;  1OYR A;  3P06 A;  3P3E A;  5LL6 R;  2O1U A;  2Q2E B;  4OO1 A;  2BV3 A;  4IFD E;  1Z59 A;  5BR8 I;  1Z5C A;  2V2Z A;  3GME A;  4X66 E;  3Q1Q A;  2ZM6 E;  4N3O A;  3B78 A;  3H4L A;  5DRP A;  1PIE A;  1QZR A;  2AJ4 A;  2EFG A;  4LF4 I;  4DV6 I;  2CZ9 A;  2WNR A;  4X65 E;  4X66 I;  2ZM6 I;  1KIJ A;  3JAM C;  1MU5 A;  1Z0G A;  4WUD A;  4AQY E;  2DEI A;  2JT2 A;  1N33 E;  3P76 A;  3CDJ A;  4AID A;  5JEA B;  1UDN A;  4QNK A;  4GKJ E;  4NXM I;  4AQY I;  2WP8 B;  4JI3 E;  1HNW E;  1N33 I;  3WU4 A;  1FJG E;  5LMN E;  1N32 E;  4LF5 E;  4DPX A;  4DV2 I;  1PKP A;  4M1K A;  1XHK A;  1Z0E A;  1H73 A;  3U1Y A;  2BA0 G;  1OJ4 A;  4LFC I;  4OX9 I;  4HY1 A;  4GKJ I;  2E5L I;  4JI3 I;  1HNW I;  1XNR E;  1IBK I;  4JI6 E;  3LPS A;  5LMN I;  4JI2 E;  5JEA F;  1Z0V A;  1DAR A;  5C0X D;  1NZ0 A;  4JI8 E;  1HNZ I;  1B63 A;  5FWK A;  4DV7 I;  4LFA I;  3PS3 A;  4Z7C A;  4JI2 I;  4FWG A;  4JI0 E;  4R1F A;  3QT5 A;  4KHP I;  5DRQ A;  1UEK A;  1Y6Z A;  4DR4 E;  4DU8 A;  4BA1 A;  3M85 D;  4JI0 I;  2PNZ B;  5IWA I;  2R3V A;  4EMD A;  5K36 D;  5DRO A;  1H7S A;  1YHC A;  2GQ0 A;  5DRR A;  2CVE A;  2DEJ A;  2Z5B A;  1J5E E;  4FW5 A;  4DV3 I;  3GCM A;  2X7I A;  2UU9 E;  5LMU E;  2C38 A;  4GKK E;  2UXC E;  4X62 E;  4LFB E;  1USU A;  3D4J A;  4YHH E;  1ZXN A;  4ISA A;  2UU9 I;  1R6M A;  5LMU I;  1RR9 A;  1MX0 A;  4LFB I;  4FN5 A;  4IS9 A;  4YY3 E;  4UT4 A;  2IES A;  4OO1 D;  3T1Y E;  1HK7 A;  3OTO I;  4B3R E;  1P42 A;  4DR5 E;  4JI4 I;  5JEA C;  1ELO A;  4YY3 I;  2NN6 B;  4IFD D;  2Z5C B;  4FW3 A;  1XMQ I;  4QNJ A;  4JYA E;  3PS2 A;  1Z5B A;  4DR5 I;  4J3D A;  4DPY A;  4DR1 I;  1E3P A;  2OI2 A;  3GLL A;  2JEA B;  4X64 I;  3J7A G;  4LCH A;  1N0U A;  3J81 Q;  4JYA I;  5C0X B;  1Y4U A;  5BR8 E;  5JEA E;  2V8P A;  2X36 A;  3HJC A;  2C37 A;  4BA2 A;  5GMD A;  2A2C A;  2UUB I;  4NXN I;  4B3T I;  3V5R A;  1Y4S A;  4DR6 I;  4LF4 E;  4DV6 E;  4IZJ B;  4IFD A;  1RRE A;  2PNL A;  3ZZT A;  3P3G A;  4B3M E;  2HHH E;  2BA1 G;  2PO1 B;  2C39 B;  4DUZ E;  1Y5Y A;  2XEX A;  4B3S I;  5K36 B;  4FW9 A;  2BR2 A;  3ZM7 A;  5IT9 C;  4B3M I;  1I94 E;  2HHH I;  3M7N D;  2PO0 B;  1H74 A;  4NXM E;  4DUZ I;  1MG7 A;  2GO3 A;  4P7A A;  4DV2 E;  3ZKD A;  4LPF A;  2PO2 A;  1I94 I;  4WUB A;  4LFC E;  4OX9 E;  2F4V E;  2E5L E;  2V2Q A;  1HNX I;  4FW4 A;  1IBK E;  1S4E A;  4LF8 E;  4URL A;  5IT9 Q;  1S16 A;  4LCG A;  5ELW A;  3JAM Q;  3ZZU A;  4JI7 E;  2HKJ A;  2UUA I;  2F4V I;  3L7Z B;  2HKE A;  3K85 A;  1Z0T A;  1HNZ E;  4LFA E;  4DV7 E;  4LF8 I;  1BKN A;  2AE8 A;  4JI7 I;  4OO1 B;  1FKA E;  2V34 A;  5FLX C;  4ZVI A;  4KHP E;  3H1C A;  1K47 A;  2E1R A;  1Z0B A;  2O1T A;  1YH8 A;  4MU1 A;  4DR3 I;  1UDO A;  5IWA E;  2NN6 C;  3NZK A;  2BA0 D;  2WNR B;  1H72 C;  1ZM2 A;  1NHJ A;  2O3Z A;  2GO4 A;  4DV3 E;  1ZM9 A;  3QT8 A;  4PRX A;  5C0X C;  4HYM A;  1WUU A;  2NN6 E; 
#chains in the Genus database with same CATH homology
 1EI1 A;  3PRY A;  4FWH A;  4K0K E;  1NHI A;  4LF7 I;  2UUC I;  2ZBK B;  1IBM E;  4K0K I;  2IOP A;  3Q6N A;  2UXD I;  4IZK A;  3OTO E;  1KTV A;  1IBM I;  4JI4 E;  2VQE I;  4DV4 E;  4DPU A;  4P52 A;  2VF3 A;  5A2Q C;  4HXZ A;  1NHH A;  4DR7 I;  1XMQ E;  5L3J A;  2BM0 A;  3LNU A;  1ZXM A;  4USM A;  4DV4 I;  4DR1 E;  4LF9 E;  3PYG A;  1FWL A;  4X64 E;  4DUY E;  4DV5 E;  4LF6 E;  1FI4 A;  1EA6 A;  2WW4 A;  2Z5E A;  3J80 C;  3V2U C;  1U2R A;  1ZM3 A;  2CGE A;  5A2Q Q;  3GON A;  4LF9 I;  2UUB E;  4DUY I;  4DV5 I;  4LF6 I;  4NXN E;  4B3T E;  1A6F A;  2Z5B B;  4DV0 E;  2HK3 A;  4DR6 E;  1XNQ I;  4DV1 E;  2HFS A;  4DV0 I;  4B3S E;  4HAC B;  4FWD A;  4DV1 I;  1N34 E;  4DR2 E;  2ZIT A;  2R42 A;  1D6T A;  1HNX E;  4MYT A;  4JG4 A;  4WUC A;  1N34 I;  4DR2 I;  4Z7Y A;  2UUA E;  2BM1 A;  3PYF A;  4PU9 A;  2HFU A;  4JI1 E;  1Z5A A;  4KQV A;  3HUL A;  4JI1 I;  2NPF A;  3CWV A;  4DR3 E;  4X65 I;  1N36 E;  3M6A A;  1Z0C A;  2V2V A;  3B8H A;  1N36 I;  3B82 A;  1FWK A;  4UTG A;  3QT6 A;  1PVG A;  1H7U A;  1FJG I;  4DXL A;  1B62 A;  1N32 I;  4LF5 I;  1KVK A;  5FLX Q;  2UXB E;  4JV5 E;  2HK2 A;  1XNR I;  4JI6 I;  4LF7 E;  2UUC E;  3WU5 A;  4ED4 A;  4PRV A;  2UXB I;  4DPW A;  4JV5 I;  1ZM4 A;  5GME A;  4JI8 I;  1FNM A;  2UXD E;  4IZJ D;  2PNM A;  2Z5C A;  1IBL E;  2VQE E;  1XMO E;  4DR4 I;  4DR7 E;  3PYD A;  4DU7 A;  2VQF E;  1IBL I;  4I3H A;  4USK A;  1XMO I;  1USV A;  2LJP A;  1HR0 E;  2CG9 A;  2VQF I;  2IOQ A;  3F0N A;  1J5E I;  2A2D A;  3J7A M;  3PYE A;  3WU6 A;  3ZZ0 A;  1HR0 I;  4IZJ A;  3ZKB A;  3K1J A;  2GS8 A;  4HAC A;  3LTO A;  4GKK I;  2UXC I;  2O1V A;  4X62 I;  1XNQ E;  4YHH I;  1Z0W A;  3T1H E;  3Q6M A;  2O1W A;  3QT7 A;  1N0V C;  3J81 C;  1VIS A;  4DPT A;  4MYU A;  1KKH A;  3J80 Q;  3T1H I;  3T1Y I;  4B3R I;  3K17 A;  4XTJ A;  3WU3 A;  4JI5 E;  4IZK B;  2J7K A;  4RPF A;  4JI5 I;  3P06 A;  5LL6 R;  2O1U A;  2Q2E B;  2BV3 A;  1Z59 A;  5BR8 I;  1Z5C A;  2V2Z A;  4X66 E;  3Q1Q A;  2ZM6 E;  4N3O A;  3B78 A;  3H4L A;  1PIE A;  1QZR A;  2AJ4 A;  2EFG A;  4LF4 I;  4DV6 I;  2CZ9 A;  4X65 E;  4X66 I;  2ZM6 I;  1KIJ A;  3JAM C;  1MU5 A;  1Z0G A;  4WUD A;  4AQY E;  2DEI A;  1N33 E;  4GKJ E;  4NXM I;  4AQY I;  4JI3 E;  1HNW E;  1N33 I;  3WU4 A;  1FJG E;  5LMN E;  1N32 E;  4LF5 E;  4DPX A;  4DV2 I;  1PKP A;  4M1K A;  1XHK A;  1Z0E A;  1H73 A;  1OJ4 A;  4LFC I;  4OX9 I;  4HY1 A;  4GKJ I;  2E5L I;  4JI3 I;  1HNW I;  1XNR E;  1IBK I;  4JI6 E;  3LPS A;  5LMN I;  4JI2 E;  1Z0V A;  1DAR A;  1NZ0 A;  4JI8 E;  1HNZ I;  1B63 A;  5FWK A;  4DV7 I;  4LFA I;  4Z7C A;  4JI2 I;  4FWG A;  4JI0 E;  4R1F A;  3QT5 A;  4KHP I;  1UEK A;  1Y6Z A;  4DR4 E;  4DU8 A;  4JI0 I;  5IWA I;  2R3V A;  4EMD A;  1H7S A;  2GQ0 A;  2DEJ A;  2Z5B A;  1J5E E;  4DV3 I;  2X7I A;  2UU9 E;  5LMU E;  4GKK E;  2UXC E;  4X62 E;  4LFB E;  1USU A;  3D4J A;  4YHH E;  1ZXN A;  2UU9 I;  5LMU I;  1RR9 A;  1MX0 A;  4LFB I;  4FN5 A;  4YY3 E;  4UT4 A;  3T1Y E;  1HK7 A;  3OTO I;  4B3R E;  4DR5 E;  4JI4 I;  1ELO A;  4YY3 I;  2Z5C B;  1XMQ I;  4JYA E;  1Z5B A;  4DR5 I;  4DPY A;  4DR1 I;  2OI2 A;  4X64 I;  3J7A G;  1N0U A;  3J81 Q;  4JYA I;  1Y4U A;  5BR8 E;  2V8P A;  2X36 A;  3HJC A;  5GMD A;  2A2C A;  2UUB I;  4NXN I;  4B3T I;  3V5R A;  1Y4S A;  4DR6 I;  4LF4 E;  4DV6 E;  4IZJ B;  1RRE A;  2PNL A;  3ZZT A;  4B3M E;  2HHH E;  4DUZ E;  2XEX A;  4B3S I;  4FW9 A;  3ZM7 A;  5IT9 C;  4B3M I;  1I94 E;  2HHH I;  1H74 A;  4NXM E;  4DUZ I;  1MG7 A;  4P7A A;  4DV2 E;  3ZKD A;  1I94 I;  4WUB A;  4LFC E;  4OX9 E;  2F4V E;  2E5L E;  2V2Q A;  1HNX I;  1IBK E;  1S4E A;  4LF8 E;  4URL A;  5IT9 Q;  1S16 A;  3JAM Q;  3ZZU A;  4JI7 E;  2HKJ A;  2UUA I;  2F4V I;  2HKE A;  3K85 A;  1Z0T A;  1HNZ E;  4LFA E;  4DV7 E;  4LF8 I;  1BKN A;  4JI7 I;  1FKA E;  2V34 A;  5FLX C;  4ZVI A;  4KHP E;  1K47 A;  2E1R A;  1Z0B A;  2O1T A;  4DR3 I;  5IWA E;  1H72 C;  1ZM2 A;  1NHJ A;  4DV3 E;  1ZM9 A;  3QT8 A;  4PRX A;  4HYM A;  1WUU A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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4JI0I

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations