5C44I

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
molecule tags Transferase/dna/rna
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
total genus 9
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I02
3S14I 3LUSA 3S17I 2JA7I 4BBSI 1YUAA 3K7AI 3HOYI 3PO2I 3GTMI 3H3VJ 3HOVI 4NBHA 4A3GI 4NBAA 4NBBA 2HF1A 1VLAA 1TFIA 3GTMS 2JA8I 4NB9A 1NUIA 2AKLA 2JS4A 3HOZI 3S16I 3GTKI 3S1QI 4Y52I 4A3JI 3S1RI 5IP7I 1TWFI 3VB9A 2R92I 4X6AI 3D6WA 2KPIA 2F4MA 2NVTI 1WCMI 5CM2M 4NBFA 3I4NI 1K83I 1TWAI 4A3MI 3GTGI 1ML8A 3S2DI 3S15I 5C44I 4NBCA 3Q87A 3PO3I 3U50C 5FLMI 4A3BI 1PFTA 3GTOI 3GCFA 2DE7A 2VUMI 4A3CI 4NOZA 3PO3S 3CQZI 3M3YI 1Y1WI 3GTLI 1TWGI 3RZDI 1ZB9A 4Y7NI 2E2HI 3HOUI 3EERA 5IP9I 2B63I 2JR6A 3GTJI 1LQLA 4A3DI 1RLYA 3RZOI 1SFOI 5C3EI 4QTUA 3VMGA 3I4MI 4BXXI 1L1OC 4NB8A 1TWHI 1R9TI 1WW9A 4A93I 3S1NI 3H0GI 4BY1I 3VMHA 1X3ZA 4QTTA 1RO4A 3ESWA 4A3EI 1Y1VI 1I3QI 2J6AA 4BY7I 4A3II 1X3WA 1Y1VS 2DE5A 2JA6I 2F4OA 5C4XI 3HOWI 1DL6A 3S2HI 2E2II 3I07A 2DE6A 3VMIA 3HOXI 1I6HI 2NVXI 4XX2A 2E2JI 3GTQI 3S1MI 4NBEA 3M4OI 2P3YA 5C4JI 1USPA 4NBDA 4A3KI 2NVQI 2RBLA 4A3FI 2R93I 2K5RA 2NVYI 2PK7A 2YU9I 1I50I 3FKII 2R7ZI 4A3LI 1TWCI 4BBRI 1ZB8A 1QYPA 2JNYA 4MH4A 2JA5I 3GTPI 1N2FA 2BJOA 3GKQA 1USPB 4NBGA
chains in the Genus database with same CATH superfamily
3NH4A 2JA7I 1K9M1 1Q812 1YUAA 2LEXA 3PO2I 3CCEZ 3CC21 5D1OA 2VPXA 3HOZI 1YJW1 1Z03A 1QVFZ 3CD61 1YJ91 3FQMA 3CC41 1Q811 3D6WA 1Y8CA 3CCE1 2F4MA 3KIFA 1WIIA 5A2Qf 1K83I 3GTGI 4MD8A 4NBCA 2Q51A 2LIYA 1PFTA 3J81b 4NOZA 1VQ5Z 3M3YI 1Y1WI 3CCUZ 3GTLI 1TWGI 3TE5B 3RZDI 1KD11 3EEDA 2ZAEB 3NFZA 5IP9I 2JR6A 3P5JB 1Q861 3CCQZ 5C3EI 3VMGA 5D1PA 2Q4ZA 4NB8A 2EGTA 3J80f 1VQ51 3CCU1 2QRCB 2V8JA 2V8KA 4A93I 3G71Z 2M48A 1S7MA 2IV2X 2V45A 1RO4A 4RS4A 1I3QI 2J6AA 1X0TA 5C4XI 3CCLZ 1DL6A 2OOYB 2HU9A 3CXCY 2OTL1 2O4HA 1VQ41 3OW2Z 3IF8A 5C4JI 4A3KI 5AN9F 3G6EZ 5FLXf 2JNYA 2JA5I 1Z02A 3D2LA 4RVDA 3GTPI 2OTJZ 3IR7A 4RVHA 3CCRZ 3S17I 3CCJZ 4BBSI 1YHQZ 1Q7Y1 3HOYI 2LFUA 3GTMI 1K732 2QA4Z 4NBBA 1RO0A 1VQOZ 4NB9A 2H85A 2OTJ1 1NUIA 2AKLA 1QXFA 1YJN1 3GTKI 3CCR1 4CL1A 3CCJ1 1YHQ1 5T67A 1TWFI 2QEXZ 2QA41 2IZ3A 2KPIA 1K731 2NVTI 1VQO1 1WCMI 4S1TA 3I55Z 2P28A 3I4NI 4MONA 3S15I 5C44I 4MRIA 2QEX1 3U50C 1Z01A 3I551 4Y7NI 3EERA 2B63I 4A3DI 3RZOI 4NFRA 3CPWZ 2RHBA 3I4MI 4BXXI 5D1OB 1TWHI 3J7A4 3VTNA 3S1NI 1YITZ 2JIPA 3VMHA 1X3ZA 1VQ6Z 3G4SZ 3BG0B 1KC82 1Y1VI 2E9HA 1X3WA 2F4OA 1YIT1 3BG1B 1Q822 3S2HI 5T6BA 2IZ4A 3CMEZ 3NH5A 4E2WA 1VQ9Z 4E2XA 1WZNA 3G4S1 4RVFA 3VMIA 3HOXI 1I6HI 1KC81 4XX2A 2NVXI 2NAPA 3OW2Y 3JAMf 1VQ8Z 3QWUA 2G2KA 3S1MI 1FDIA 4NBEA 1USPA 2RIQA 3CME1 4E2YA 1W2BZ 2VF1A 5IT9b 4A3FI 3CCQ1 3NH8A 2PK7A 2YU9I 4A3LI 1M1K2 4HGZA 2VPZA 1QYPA 4MH4A 3G711 1RO2A 4MD9A 3GKQA 1USPB 4NBGA 1VQ7Z 5T64A 1YIJZ 3H3VJ 4A3GI 4NBAA 4E33A 2HF1A 1VLAA 3CCL1 3GTMS 2JA8I 2V3VA 2JS4A 2RT9A 2YADA 3S16I 1JJ2Z 1VQ71 1VQNZ 4A3JI 5IP7I 1NP6A 3I56Z 2O53A 2OZKA 1YIJ1 2R92I 5LL6f 2PMZA 3CC7Z 5CM2M 1VQLZ 4NBFA 1P9NA 1VQMZ 1TWAI 4E30A 4MD7A 3G6E1 1ML8A 1JWHC 3S2DI 2V8IA 3J80b 3I561 1S72Z 4MXUA 3PO3I 4A3BI 2PM9A 3GCFA 2WB1A 2E7ZA 3CQZI 1VQL1 2GTIA 1QVFY 1RQFA 1ZH1A 3HOUI 1VQM1 3CPWY 3GTJI 1S721 1LQLA 4NH1C 1SFOI 4E2ZA 2JIOA 2QR1B 1YUKA 3IFUA 4QTUA 3CCSZ 1FDOA 2Y0SA 1WW9A 2AYDA 4BY1I 1KQSZ 3J81f 2OOXB 1K8A2 4DK1A 4E31A 1NJI2 1VQPZ 3CCS1 3F3FC 4A3II 1Y1VS 2DE5A 3HOWI 2JIRA 3I07A 2JUBA 2DE6A 1K8A1 4RVGA 3CD6Z 1NJI1 1VQP1 1YJ9Z 3GTQI 3FQQA 1QVGZ 3CC4Z 1AA6A 2KI7B 1SIWA 5IT9f 1W2BY 3M4OI 4NBDA 2VPWA 1Q16A 2NVYI 4HGYA 4DQYB 3D9XA 3TDHB 1N2FA 1KD12 3HKZA 2K5RA 2I3CA 4HH4A 3S14I 3LUSA 1VQ61 2R6MA 1Q862 3K7AI 1RNIA 3HOVI 4NBHA 1JJ2Y 1TFIA 1Q821 1VQ91 4RV9A 3S1QI 2WAQA 3CMAZ 4Y52I 3S1RI 3CCMZ 2JIQA 3VB9A 4X6AI 1VQ81 2JIMA 3KIHA 2JMOA 2M6NA 3IX0A 3NDJA 4A3MI 3CMA1 5A2Qb 1VQKZ 3Q87A 3CCM1 3NDIA 1M1K1 5FLMI 3GTOI 2DE7A 1QF8A 1YI2Z 2VUMI 3PO3S 4A3CI 4E32A 2OTLZ 4EWCA 2K3RA 1ZB9A 2E2HI 3MONA 1VQ4Z 1M902 1VQK1 1RLYA 4AYBA 1YI21 1L1OC 1WJ2A 1R9TI 1KQSY 2QREB 4DGLA 1VQN1 3H0GI 2QKDA 3JAMb 1M901 2QRDB 1N8R2 2QLVB 4QTTA 2VPYA 3ESWA 3CC71 3T4NB 4A3EI 1Q7Y2 3MZKB 3MZLB 4BY7I 2W04A 2JA6I 1KRLA 3CCVZ 2GU2A 2E2II 1YJNZ 1QVGY 1N8R1 2VUGA 2E2JI 3CXCZ 3CCV1 2P3YA 2NVQI 2RBLA 2R93I 1K9M2 2W03A 1I50I 3FKII 2R7ZI 2RPRA 1TWCI 3F3PC 4BBRI 1ZB8A 2GTHA 4TNUA 3CC2Z 5FLXb 2BJOA 1YJWZ
chains in the Genus database with same CATH topology
3NH4A 2JA7I 1K9M1 1Q812 1YUAA 3PO2I 3CCEZ 3CC21 5D1OA 3HOZI 1YJW1 1Z03A 1QVFZ 3CD61 1YJ91 3FQMA 3CC41 1Q811 3D6WA 3CCE1 2F4MA 3KIFA 1WIIA 5A2Qf 1K83I 3GTGI 4MD8A 4NBCA 2Q51A 2LIYA 1PFTA 3J81b 4NOZA 1VQ5Z 3M3YI 1Y1WI 3CCUZ 3GTLI 1TWGI 3TE5B 3RZDI 1KD11 3EEDA 2ZAEB 3NFZA 5IP9I 2JR6A 3P5JB 1Q861 3CCQZ 5C3EI 3VMGA 5D1PA 2Q4ZA 4NB8A 2EGTA 3J80f 1VQ51 3CCU1 2QRCB 2V8JA 2V8KA 4A93I 3G71Z 2M48A 1S7MA 1RO4A 4RS4A 1I3QI 2J6AA 1X0TA 5C4XI 3CCLZ 1DL6A 2OOYB 2HU9A 3CXCY 2OTL1 2O4HA 1VQ41 3OW2Z 3IF8A 5C4JI 4A3KI 5AN9F 3G6EZ 5FLXf 2JNYA 2JA5I 1Z02A 4RVDA 3GTPI 2OTJZ 4RVHA 3CCRZ 3S17I 3CCJZ 4BBSI 1YHQZ 1Q7Y1 3HOYI 2LFUA 3GTMI 1K732 2QA4Z 4NBBA 1RO0A 1VQOZ 4NB9A 2H85A 2OTJ1 1NUIA 2AKLA 1YJN1 3GTKI 3CCR1 4CL1A 3CCJ1 1YHQ1 5T67A 1TWFI 2QEXZ 2QA41 2IZ3A 2KPIA 1K731 2NVTI 1VQO1 1WCMI 4S1TA 3I55Z 2P28A 3I4NI 4MONA 3S15I 5C44I 4MRIA 2QEX1 3U50C 1Z01A 3I551 4Y7NI 3EERA 2B63I 4A3DI 3RZOI 4NFRA 3CPWZ 2RHBA 3I4MI 4BXXI 5D1OB 1TWHI 3J7A4 3VTNA 3S1NI 1YITZ 3VMHA 1X3ZA 1VQ6Z 3G4SZ 3BG0B 1KC82 1Y1VI 2E9HA 1X3WA 2F4OA 1YIT1 3BG1B 1Q822 3S2HI 5T6BA 2IZ4A 3CMEZ 3NH5A 4E2WA 1VQ9Z 4E2XA 3G4S1 4RVFA 3VMIA 3HOXI 1I6HI 1KC81 4XX2A 2NVXI 3OW2Y 3JAMf 1VQ8Z 3QWUA 2G2KA 3S1MI 4NBEA 1USPA 2RIQA 3CME1 4E2YA 1W2BZ 2VF1A 5IT9b 4A3FI 3CCQ1 3NH8A 2PK7A 2YU9I 4A3LI 1M1K2 4HGZA 1QYPA 4MH4A 3G711 1RO2A 4MD9A 3GKQA 1USPB 4NBGA 1VQ7Z 5T64A 1YIJZ 3H3VJ 4A3GI 4NBAA 4E33A 2HF1A 1VLAA 3CCL1 3GTMS 2JA8I 2JS4A 2RT9A 2YADA 3S16I 1JJ2Z 1VQ71 1VQNZ 4A3JI 5IP7I 1NP6A 3I56Z 2O53A 2OZKA 1YIJ1 2R92I 5LL6f 2PMZA 3CC7Z 5CM2M 1VQLZ 4NBFA 1P9NA 1VQMZ 1TWAI 4E30A 4MD7A 3G6E1 1ML8A 1JWHC 3S2DI 2V8IA 3J80b 3I561 1S72Z 4MXUA 3PO3I 4A3BI 2PM9A 3GCFA 2WB1A 3CQZI 1VQL1 2GTIA 1QVFY 1RQFA 1ZH1A 3HOUI 1VQM1 3CPWY 3GTJI 1S721 1LQLA 4NH1C 1SFOI 4E2ZA 2QR1B 1YUKA 3IFUA 4QTUA 3CCSZ 2Y0SA 1WW9A 4BY1I 1KQSZ 3J81f 2OOXB 1K8A2 4DK1A 4E31A 1NJI2 1VQPZ 3CCS1 3F3FC 4A3II 1Y1VS 2DE5A 3HOWI 3I07A 2JUBA 2DE6A 1K8A1 4RVGA 3CD6Z 1NJI1 1VQP1 1YJ9Z 3GTQI 3FQQA 1QVGZ 3CC4Z 2KI7B 5IT9f 1W2BY 3M4OI 4NBDA 2NVYI 4HGYA 4DQYB 3D9XA 3TDHB 1N2FA 1KD12 3HKZA 2K5RA 2I3CA 4HH4A 3S14I 3LUSA 1VQ61 2R6MA 1Q862 3K7AI 1RNIA 3HOVI 4NBHA 1JJ2Y 1TFIA 1Q821 1VQ91 4RV9A 3S1QI 2WAQA 3CMAZ 4Y52I 3S1RI 3CCMZ 3VB9A 4X6AI 1VQ81 3KIHA 2JMOA 2M6NA 3IX0A 3NDJA 4A3MI 3CMA1 5A2Qb 1VQKZ 3Q87A 3CCM1 3NDIA 1M1K1 5FLMI 3GTOI 2DE7A 1QF8A 1YI2Z 2VUMI 3PO3S 4A3CI 4E32A 2OTLZ 4EWCA 2K3RA 1ZB9A 2E2HI 3MONA 1VQ4Z 1M902 1VQK1 1RLYA 4AYBA 1YI21 1L1OC 1R9TI 1KQSY 2QREB 4DGLA 1VQN1 3H0GI 2QKDA 3JAMb 1M901 2QRDB 1N8R2 2QLVB 4QTTA 3ESWA 3CC71 3T4NB 4A3EI 1Q7Y2 3MZKB 3MZLB 4BY7I 2W04A 2JA6I 1KRLA 3CCVZ 2GU2A 2E2II 1YJNZ 1QVGY 1N8R1 2VUGA 2E2JI 3CXCZ 3CCV1 2P3YA 2NVQI 2RBLA 2R93I 1K9M2 2W03A 1I50I 3FKII 2R7ZI 2RPRA 1TWCI 3F3PC 4BBRI 1ZB8A 2GTHA 4TNUA 3CC2Z 5FLXb 2BJOA 1YJWZ
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S14 I;  3LUS A;  3S17 I;  2JA7 I;  4BBS I;  1YUA A;  3K7A I;  3HOY I;  3PO2 I;  3GTM I;  3H3V J;  3HOV I;  4NBH A;  4A3G I;  4NBA A;  4NBB A;  2HF1 A;  1VLA A;  1TFI A;  3GTM S;  2JA8 I;  4NB9 A;  1NUI A;  2AKL A;  2JS4 A;  3HOZ I;  3S16 I;  3GTK I;  3S1Q I;  4Y52 I;  4A3J I;  3S1R I;  5IP7 I;  1TWF I;  3VB9 A;  2R92 I;  4X6A I;  3D6W A;  2KPI A;  2F4M A;  2NVT I;  1WCM I;  5CM2 M;  4NBF A;  3I4N I;  1K83 I;  1TWA I;  4A3M I;  3GTG I;  1ML8 A;  3S2D I;  3S15 I;  5C44 I;  4NBC A;  3Q87 A;  3PO3 I;  3U50 C;  5FLM I;  4A3B I;  1PFT A;  3GTO I;  3GCF A;  2DE7 A;  2VUM I;  4A3C I;  4NOZ A;  3PO3 S;  3CQZ I;  3M3Y I;  1Y1W I;  3GTL I;  1TWG I;  3RZD I;  1ZB9 A;  4Y7N I;  2E2H I;  3HOU I;  3EER A;  5IP9 I;  2B63 I;  2JR6 A;  3GTJ I;  1LQL A;  4A3D I;  1RLY A;  3RZO I;  1SFO I;  5C3E I;  4QTU A;  3VMG A;  3I4M I;  4BXX I;  1L1O C;  4NB8 A;  1TWH I;  1R9T I;  1WW9 A;  4A93 I;  3S1N I;  3H0G I;  4BY1 I;  3VMH A;  1X3Z A;  4QTT A;  1RO4 A;  3ESW A;  4A3E I;  1Y1V I;  1I3Q I;  2J6A A;  4BY7 I;  4A3I I;  1X3W A;  1Y1V S;  2DE5 A;  2JA6 I;  2F4O A;  5C4X I;  3HOW I;  1DL6 A;  3S2H I;  2E2I I;  3I07 A;  2DE6 A;  3VMI A;  3HOX I;  1I6H I;  2NVX I;  4XX2 A;  2E2J I;  3GTQ I;  3S1M I;  4NBE A;  3M4O I;  2P3Y A;  5C4J I;  1USP A;  4NBD A;  4A3K I;  2NVQ I;  2RBL A;  4A3F I;  2R93 I;  2K5R A;  2NVY I;  2PK7 A;  2YU9 I;  1I50 I;  3FKI I;  2R7Z I;  4A3L I;  1TWC I;  4BBR I;  1ZB8 A;  1QYP A;  2JNY A;  4MH4 A;  2JA5 I;  3GTP I;  1N2F A;  2BJO A;  3GKQ A;  1USP B;  4NBG A; 
#chains in the Genus database with same CATH topology
 3NH4 A;  2JA7 I;  1K9M 1;  1Q81 2;  1YUA A;  2LEX A;  3PO2 I;  3CCE Z;  3CC2 1;  5D1O A;  2VPX A;  3HOZ I;  1YJW 1;  1Z03 A;  1QVF Z;  3CD6 1;  1YJ9 1;  3FQM A;  3CC4 1;  1Q81 1;  3D6W A;  1Y8C A;  3CCE 1;  2F4M A;  3KIF A;  1WII A;  5A2Q f;  1K83 I;  3GTG I;  4MD8 A;  4NBC A;  2Q51 A;  2LIY A;  1PFT A;  3J81 b;  4NOZ A;  1VQ5 Z;  3M3Y I;  1Y1W I;  3CCU Z;  3GTL I;  1TWG I;  3TE5 B;  3RZD I;  1KD1 1;  3EED A;  2ZAE B;  3NFZ A;  5IP9 I;  2JR6 A;  3P5J B;  1Q86 1;  3CCQ Z;  5C3E I;  3VMG A;  5D1P A;  2Q4Z A;  4NB8 A;  2EGT A;  3J80 f;  1VQ5 1;  3CCU 1;  2QRC B;  2V8J A;  2V8K A;  4A93 I;  3G71 Z;  2M48 A;  1S7M A;  2IV2 X;  2V45 A;  1RO4 A;  4RS4 A;  1I3Q I;  2J6A A;  1X0T A;  5C4X I;  3CCL Z;  1DL6 A;  2OOY B;  2HU9 A;  3CXC Y;  2OTL 1;  2O4H A;  1VQ4 1;  3OW2 Z;  3IF8 A;  5C4J I;  4A3K I;  5AN9 F;  3G6E Z;  5FLX f;  2JNY A;  2JA5 I;  1Z02 A;  3D2L A;  4RVD A;  3GTP I;  2OTJ Z;  3IR7 A;  4RVH A;  3CCR Z;  3S17 I;  3CCJ Z;  4BBS I;  1YHQ Z;  1Q7Y 1;  3HOY I;  2LFU A;  3GTM I;  1K73 2;  2QA4 Z;  4NBB A;  1RO0 A;  1VQO Z;  4NB9 A;  2H85 A;  2OTJ 1;  1NUI A;  2AKL A;  1QXF A;  1YJN 1;  3GTK I;  3CCR 1;  4CL1 A;  3CCJ 1;  1YHQ 1;  5T67 A;  1TWF I;  2QEX Z;  2QA4 1;  2IZ3 A;  2KPI A;  1K73 1;  2NVT I;  1VQO 1;  1WCM I;  4S1T A;  3I55 Z;  2P28 A;  3I4N I;  4MON A;  3S15 I;  5C44 I;  4MRI A;  2QEX 1;  3U50 C;  1Z01 A;  3I55 1;  4Y7N I;  3EER A;  2B63 I;  4A3D I;  3RZO I;  4NFR A;  3CPW Z;  2RHB A;  3I4M I;  4BXX I;  5D1O B;  1TWH I;  3J7A 4;  3VTN A;  3S1N I;  1YIT Z;  2JIP A;  3VMH A;  1X3Z A;  1VQ6 Z;  3G4S Z;  3BG0 B;  1KC8 2;  1Y1V I;  2E9H A;  1X3W A;  2F4O A;  1YIT 1;  3BG1 B;  1Q82 2;  3S2H I;  5T6B A;  2IZ4 A;  3CME Z;  3NH5 A;  4E2W A;  1VQ9 Z;  4E2X A;  1WZN A;  3G4S 1;  4RVF A;  3VMI A;  3HOX I;  1I6H I;  1KC8 1;  4XX2 A;  2NVX I;  2NAP A;  3OW2 Y;  3JAM f;  1VQ8 Z;  3QWU A;  2G2K A;  3S1M I;  1FDI A;  4NBE A;  1USP A;  2RIQ A;  3CME 1;  4E2Y A;  1W2B Z;  2VF1 A;  5IT9 b;  4A3F I;  3CCQ 1;  3NH8 A;  2PK7 A;  2YU9 I;  4A3L I;  1M1K 2;  4HGZ A;  2VPZ A;  1QYP A;  4MH4 A;  3G71 1;  1RO2 A;  4MD9 A;  3GKQ A;  1USP B;  4NBG A;  1VQ7 Z;  5T64 A;  1YIJ Z;  3H3V J;  4A3G I;  4NBA A;  4E33 A;  2HF1 A;  1VLA A;  3CCL 1;  3GTM S;  2JA8 I;  2V3V A;  2JS4 A;  2RT9 A;  2YAD A;  3S16 I;  1JJ2 Z;  1VQ7 1;  1VQN Z;  4A3J I;  5IP7 I;  1NP6 A;  3I56 Z;  2O53 A;  2OZK A;  1YIJ 1;  2R92 I;  5LL6 f;  2PMZ A;  3CC7 Z;  5CM2 M;  1VQL Z;  4NBF A;  1P9N A;  1VQM Z;  1TWA I;  4E30 A;  4MD7 A;  3G6E 1;  1ML8 A;  1JWH C;  3S2D I;  2V8I A;  3J80 b;  3I56 1;  1S72 Z;  4MXU A;  3PO3 I;  4A3B I;  2PM9 A;  3GCF A;  2WB1 A;  2E7Z A;  3CQZ I;  1VQL 1;  2GTI A;  1QVF Y;  1RQF A;  1ZH1 A;  3HOU I;  1VQM 1;  3CPW Y;  3GTJ I;  1S72 1;  1LQL A;  4NH1 C;  1SFO I;  4E2Z A;  2JIO A;  2QR1 B;  1YUK A;  3IFU A;  4QTU A;  3CCS Z;  1FDO A;  2Y0S A;  1WW9 A;  2AYD A;  4BY1 I;  1KQS Z;  3J81 f;  2OOX B;  1K8A 2;  4DK1 A;  4E31 A;  1NJI 2;  1VQP Z;  3CCS 1;  3F3F C;  4A3I I;  1Y1V S;  2DE5 A;  3HOW I;  2JIR A;  3I07 A;  2JUB A;  2DE6 A;  1K8A 1;  4RVG A;  3CD6 Z;  1NJI 1;  1VQP 1;  1YJ9 Z;  3GTQ I;  3FQQ A;  1QVG Z;  3CC4 Z;  1AA6 A;  2KI7 B;  1SIW A;  5IT9 f;  1W2B Y;  3M4O I;  4NBD A;  2VPW A;  1Q16 A;  2NVY I;  4HGY A;  4DQY B;  3D9X A;  3TDH B;  1N2F A;  1KD1 2;  3HKZ A;  2K5R A;  2I3C A;  4HH4 A;  3S14 I;  3LUS A;  1VQ6 1;  2R6M A;  1Q86 2;  3K7A I;  1RNI A;  3HOV I;  4NBH A;  1JJ2 Y;  1TFI A;  1Q82 1;  1VQ9 1;  4RV9 A;  3S1Q I;  2WAQ A;  3CMA Z;  4Y52 I;  3S1R I;  3CCM Z;  2JIQ A;  3VB9 A;  4X6A I;  1VQ8 1;  2JIM A;  3KIH A;  2JMO A;  2M6N A;  3IX0 A;  3NDJ A;  4A3M I;  3CMA 1;  5A2Q b;  1VQK Z;  3Q87 A;  3CCM 1;  3NDI A;  1M1K 1;  5FLM I;  3GTO I;  2DE7 A;  1QF8 A;  1YI2 Z;  2VUM I;  3PO3 S;  4A3C I;  4E32 A;  2OTL Z;  4EWC A;  2K3R A;  1ZB9 A;  2E2H I;  3MON A;  1VQ4 Z;  1M90 2;  1VQK 1;  1RLY A;  4AYB A;  1YI2 1;  1L1O C;  1WJ2 A;  1R9T I;  1KQS Y;  2QRE B;  4DGL A;  1VQN 1;  3H0G I;  2QKD A;  3JAM b;  1M90 1;  2QRD B;  1N8R 2;  2QLV B;  4QTT A;  2VPY A;  3ESW A;  3CC7 1;  3T4N B;  4A3E I;  1Q7Y 2;  3MZK B;  3MZL B;  4BY7 I;  2W04 A;  2JA6 I;  1KRL A;  3CCV Z;  2GU2 A;  2E2I I;  1YJN Z;  1QVG Y;  1N8R 1;  2VUG A;  2E2J I;  3CXC Z;  3CCV 1;  2P3Y A;  2NVQ I;  2RBL A;  2R93 I;  1K9M 2;  2W03 A;  1I50 I;  3FKI I;  2R7Z I;  2RPR A;  1TWC I;  3F3P C;  4BBR I;  1ZB8 A;  2GTH A;  4TNU A;  3CC2 Z;  5FLX b;  2BJO A;  1YJW Z; 
#chains in the Genus database with same CATH homology
 3NH4 A;  2JA7 I;  1K9M 1;  1Q81 2;  1YUA A;  3PO2 I;  3CCE Z;  3CC2 1;  5D1O A;  3HOZ I;  1YJW 1;  1Z03 A;  1QVF Z;  3CD6 1;  1YJ9 1;  3FQM A;  3CC4 1;  1Q81 1;  3D6W A;  3CCE 1;  2F4M A;  3KIF A;  1WII A;  5A2Q f;  1K83 I;  3GTG I;  4MD8 A;  4NBC A;  2Q51 A;  2LIY A;  1PFT A;  3J81 b;  4NOZ A;  1VQ5 Z;  3M3Y I;  1Y1W I;  3CCU Z;  3GTL I;  1TWG I;  3TE5 B;  3RZD I;  1KD1 1;  3EED A;  2ZAE B;  3NFZ A;  5IP9 I;  2JR6 A;  3P5J B;  1Q86 1;  3CCQ Z;  5C3E I;  3VMG A;  5D1P A;  2Q4Z A;  4NB8 A;  2EGT A;  3J80 f;  1VQ5 1;  3CCU 1;  2QRC B;  2V8J A;  2V8K A;  4A93 I;  3G71 Z;  2M48 A;  1S7M A;  1RO4 A;  4RS4 A;  1I3Q I;  2J6A A;  1X0T A;  5C4X I;  3CCL Z;  1DL6 A;  2OOY B;  2HU9 A;  3CXC Y;  2OTL 1;  2O4H A;  1VQ4 1;  3OW2 Z;  3IF8 A;  5C4J I;  4A3K I;  5AN9 F;  3G6E Z;  5FLX f;  2JNY A;  2JA5 I;  1Z02 A;  4RVD A;  3GTP I;  2OTJ Z;  4RVH A;  3CCR Z;  3S17 I;  3CCJ Z;  4BBS I;  1YHQ Z;  1Q7Y 1;  3HOY I;  2LFU A;  3GTM I;  1K73 2;  2QA4 Z;  4NBB A;  1RO0 A;  1VQO Z;  4NB9 A;  2H85 A;  2OTJ 1;  1NUI A;  2AKL A;  1YJN 1;  3GTK I;  3CCR 1;  4CL1 A;  3CCJ 1;  1YHQ 1;  5T67 A;  1TWF I;  2QEX Z;  2QA4 1;  2IZ3 A;  2KPI A;  1K73 1;  2NVT I;  1VQO 1;  1WCM I;  4S1T A;  3I55 Z;  2P28 A;  3I4N I;  4MON A;  3S15 I;  5C44 I;  4MRI A;  2QEX 1;  3U50 C;  1Z01 A;  3I55 1;  4Y7N I;  3EER A;  2B63 I;  4A3D I;  3RZO I;  4NFR A;  3CPW Z;  2RHB A;  3I4M I;  4BXX I;  5D1O B;  1TWH I;  3J7A 4;  3VTN A;  3S1N I;  1YIT Z;  3VMH A;  1X3Z A;  1VQ6 Z;  3G4S Z;  3BG0 B;  1KC8 2;  1Y1V I;  2E9H A;  1X3W A;  2F4O A;  1YIT 1;  3BG1 B;  1Q82 2;  3S2H I;  5T6B A;  2IZ4 A;  3CME Z;  3NH5 A;  4E2W A;  1VQ9 Z;  4E2X A;  3G4S 1;  4RVF A;  3VMI A;  3HOX I;  1I6H I;  1KC8 1;  4XX2 A;  2NVX I;  3OW2 Y;  3JAM f;  1VQ8 Z;  3QWU A;  2G2K A;  3S1M I;  4NBE A;  1USP A;  2RIQ A;  3CME 1;  4E2Y A;  1W2B Z;  2VF1 A;  5IT9 b;  4A3F I;  3CCQ 1;  3NH8 A;  2PK7 A;  2YU9 I;  4A3L I;  1M1K 2;  4HGZ A;  1QYP A;  4MH4 A;  3G71 1;  1RO2 A;  4MD9 A;  3GKQ A;  1USP B;  4NBG A;  1VQ7 Z;  5T64 A;  1YIJ Z;  3H3V J;  4A3G I;  4NBA A;  4E33 A;  2HF1 A;  1VLA A;  3CCL 1;  3GTM S;  2JA8 I;  2JS4 A;  2RT9 A;  2YAD A;  3S16 I;  1JJ2 Z;  1VQ7 1;  1VQN Z;  4A3J I;  5IP7 I;  1NP6 A;  3I56 Z;  2O53 A;  2OZK A;  1YIJ 1;  2R92 I;  5LL6 f;  2PMZ A;  3CC7 Z;  5CM2 M;  1VQL Z;  4NBF A;  1P9N A;  1VQM Z;  1TWA I;  4E30 A;  4MD7 A;  3G6E 1;  1ML8 A;  1JWH C;  3S2D I;  2V8I A;  3J80 b;  3I56 1;  1S72 Z;  4MXU A;  3PO3 I;  4A3B I;  2PM9 A;  3GCF A;  2WB1 A;  3CQZ I;  1VQL 1;  2GTI A;  1QVF Y;  1RQF A;  1ZH1 A;  3HOU I;  1VQM 1;  3CPW Y;  3GTJ I;  1S72 1;  1LQL A;  4NH1 C;  1SFO I;  4E2Z A;  2QR1 B;  1YUK A;  3IFU A;  4QTU A;  3CCS Z;  2Y0S A;  1WW9 A;  4BY1 I;  1KQS Z;  3J81 f;  2OOX B;  1K8A 2;  4DK1 A;  4E31 A;  1NJI 2;  1VQP Z;  3CCS 1;  3F3F C;  4A3I I;  1Y1V S;  2DE5 A;  3HOW I;  3I07 A;  2JUB A;  2DE6 A;  1K8A 1;  4RVG A;  3CD6 Z;  1NJI 1;  1VQP 1;  1YJ9 Z;  3GTQ I;  3FQQ A;  1QVG Z;  3CC4 Z;  2KI7 B;  5IT9 f;  1W2B Y;  3M4O I;  4NBD A;  2NVY I;  4HGY A;  4DQY B;  3D9X A;  3TDH B;  1N2F A;  1KD1 2;  3HKZ A;  2K5R A;  2I3C A;  4HH4 A;  3S14 I;  3LUS A;  1VQ6 1;  2R6M A;  1Q86 2;  3K7A I;  1RNI A;  3HOV I;  4NBH A;  1JJ2 Y;  1TFI A;  1Q82 1;  1VQ9 1;  4RV9 A;  3S1Q I;  2WAQ A;  3CMA Z;  4Y52 I;  3S1R I;  3CCM Z;  3VB9 A;  4X6A I;  1VQ8 1;  3KIH A;  2JMO A;  2M6N A;  3IX0 A;  3NDJ A;  4A3M I;  3CMA 1;  5A2Q b;  1VQK Z;  3Q87 A;  3CCM 1;  3NDI A;  1M1K 1;  5FLM I;  3GTO I;  2DE7 A;  1QF8 A;  1YI2 Z;  2VUM I;  3PO3 S;  4A3C I;  4E32 A;  2OTL Z;  4EWC A;  2K3R A;  1ZB9 A;  2E2H I;  3MON A;  1VQ4 Z;  1M90 2;  1VQK 1;  1RLY A;  4AYB A;  1YI2 1;  1L1O C;  1R9T I;  1KQS Y;  2QRE B;  4DGL A;  1VQN 1;  3H0G I;  2QKD A;  3JAM b;  1M90 1;  2QRD B;  1N8R 2;  2QLV B;  4QTT A;  3ESW A;  3CC7 1;  3T4N B;  4A3E I;  1Q7Y 2;  3MZK B;  3MZL B;  4BY7 I;  2W04 A;  2JA6 I;  1KRL A;  3CCV Z;  2GU2 A;  2E2I I;  1YJN Z;  1QVG Y;  1N8R 1;  2VUG A;  2E2J I;  3CXC Z;  3CCV 1;  2P3Y A;  2NVQ I;  2RBL A;  2R93 I;  1K9M 2;  2W03 A;  1I50 I;  3FKI I;  2R7Z I;  2RPR A;  1TWC I;  3F3P C;  4BBR I;  1ZB8 A;  2GTH A;  4TNU A;  3CC2 Z;  5FLX b;  2BJO A;  1YJW Z; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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