5C44I

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 9

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TIV1 (7-10)TIV2 (8-11)TIV5 (29-32)S1 (14-19)TIV4 (20-23)S2 (24-29)TII1 (51-54)TVIII1 (88-91)TIV8 (53-56)S6 (100-103)TI1 (59-62)3H1 (62-64)EMPTYTI2 (65-68)S5 (83-86)S7 (109-111)TIV10 (104-107)TIV3 (19-22)S3 (35-37)S4 (70-71)TI3 (92-95)Updating...
connected with : NaN
molecule tags Transferase/dna/rna
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 9
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I02
2DE6A 4NB8A 1YUAA 1I6HI 4NBBA 2E2II 3H3VJ 4NOZA 1RLYA 3GTMS 3HOVI 4NBGA 3GTOI 3PO3S 3S1NI 1QYPA 4BBRI 3S2DI 4XX2A 4A93I 4A3EI 2NVQI 4BY1I 3Q87A 4NBHA 3HOUI 2YU9I 1USPB 2DE5A 3VMHA 1N2FA 4NBAA 4NBEA 1NUIA 3S16I 1Y1VI 4Y7NI 4NBCA 3CQZI 3GKQA 3HOXI 3S2HI 5FLMI 2NVXI 1Y1WI 1R9TI 5C44I 3GTKI 4A3BI 2R93I 1TWAI 2VUMI 1TWGI 3GTJI 2B63I 2JA6I 3D6WA 2NVYI 4QTUA 1WW9A 4A3MI 1SFOI 3K7AI 1ZB8A 1WCMI 3GCFA 5C3EI 2R92I 3HOZI 2DE7A 4MH4A 2E2HI 3GTQI 1LQLA 2JS4A 3I07A 2BJOA 3S1RI 2PK7A 3S14I 3FKII 3S17I 2JNYA 2KPIA 3LUSA 3M3YI 2F4OA 1TWCI 4NBDA 3HOWI 1I3QI 3S15I 1RO4A 2JR6A 1I50I 5C4XI 2R7ZI 3GTGI 1USPA 2E2JI 3VMIA 3U50C 2J6AA 4A3II 2P3YA 1DL6A 1K83I 1ML8A 4NBFA 3I4NI 3GTMI 4A3CI 4A3LI 4A3JI 4A3DI 3PO3I 2NVTI 3VB9A 3ESWA 4X6AI 1PFTA 3S1MI 1TWHI 4BBSI 5IP9I 4A3GI 1L1OC 3EERA 3PO2I 1ZB9A 2JA8I 3HOYI 3RZDI 2JA5I 1X3ZA 2RBLA 5IP7I 3M4OI 4BY7I 4A3KI 5CM2M 1TWFI 1X3WA 2F4MA 2K5RA 3GTPI 1Y1VS 4NB9A 4A3FI 2JA7I 4Y52I 3I4MI 1TFIA 3S1QI 2AKLA 1VLAA 3H0GI 3GTLI 3RZOI 2HF1A 5C4JI 4BXXI 4QTTA 3VMGA
chains in the Genus database with same CATH superfamily
1Y8CA 2OOXB 2E2II 3I55Z 1VQ5Z 1VQL1 4NBGA 3PO3S 1SIWA 2WB1A 1NJI1 4XX2A 1YJNZ 1K732 4A3EI 5IT9f 1QVFY 4BY1I 1VQ61 2NVQI 4A93I 1M1K2 3CCEZ 1VQK1 4MD9A 4RV9A 2YU9I 4DK1A 3CMA1 3NDJA 3VMHA 2H85A 1VQ81 3CD6Z 4Y7NI 3CQZI 3S2HI 3CPWZ 1FDOA 1R9TI 1YI21 1W2BY 1TWAI 3CCJ1 1YIJZ 4AYBA 4TNUA 3D6WA 4E2YA 2NVYI 2K3RA 1ZB8A 1WCMI 4NH1C 3CC4Z 2R92I 2RT9A 3HOZI 2DE7A 3FQQA 1AA6A 5T6BA 1YJW1 2BJOA 4RVDA 1Q7Y2 3IX0A 2GTIA 3S17I 3M3YI 3OW2Y 2V3VA 1RO4A 4EWCA 3CC71 1P9NA 1K9M2 2Y0SA 3GTGI 2E7ZA 3BG0B 1ML8A 3I4NI 3GTMI 4A3JI 2IV2X 2RIQA 3CCRZ 3VB9A 1VQPZ 2OTJ1 3CME1 2Q51A 1TWHI 4BBSI 5IP9I 4A3GI 1L1OC 3J80f 4MXUA 1S7MA 1ZB9A 2O4HA 2JA8I 1Z02A 3G4SZ 4BY7I 1KC82 1VQN1 4A3KI 2V45A 1K731 3G6EZ 4Y52I 1WZNA 2AYDA 3CXCZ 1VQ7Z 1N8R1 4E2XA 1WIIA 2VPXA 3CCV1 1YHQZ 4E31A 3P5JB 4QTTA 3VMGA 3CCQZ 3IFUA 2P28A 2LFUA 1S72Z 4NB8A 1RO2A 4NOZA 1RLYA 3GTMS 3HOVI 2RHBA 3GTOI 3S1NI 4MD7A 3S2DI 4BBRI 3FQMA 3NH5A 2Q4ZA 4NFRA 3NFZA 1VQM1 3HOUI 4RS4A 4HH4A 2LIYA 3TDHB 1N2FA 1X0TA 4MD8A 1NUIA 4RVGA 1Y1VI 3S16I 2IZ4A 5C44I 2HU9A 1Q812 2R93I 2VF1A 2JMOA 2VUMI 3GTJI 2B63I 2JA6I 1RO0A 2QEXZ 4A3MI 2WAQA 2E2HI 1Q822 2QRCB 1VQ4Z 3GTQI 1LQLA 1YITZ 1KQSZ 3I07A 3CCUZ 1K8A2 2JIMA 3S14I 2JNYA 2KPIA 2JUBA 1M902 2F4OA 1TWCI 3HOWI 3CC21 3F3PC 3T4NB 3S15I 5C4XI 1KC81 2PMZA 3VMIA 2P3YA 3I551 4RVHA 2QA4Z 1VQ51 1K83I 4NBFA 3J80b 2JIOA 2QEX1 4A3LI 3G71Z 1Q861 1YJN1 2NVTI 1VQ9Z 4E32A 1PFTA 5T67A 3CCE1 1QVGY 2YADA 4CL1A 3PO2I 1FDIA 3CD61 3KIFA 3CCSZ 5IP7I 3I56Z 4DQYB 3D9XA 2F4MA 1ZH1A 1YIJ1 4A3FI 5LL6f 1TFIA 2OTLZ 3D2LA 1JJ2Y 2AKLA 3GTLI 2HF1A 3CC41 4BXXI 4MRIA 2M6NA 2OOYB 3CCLZ 2ZAEB 3NDIA 1Q811 3CCMZ 2IZ3A 2RPRA 4NBBA 5A2Qf 1YJ9Z 1NJI2 2O53A 1QVFZ 1M1K1 4E2ZA 4NBHA 2G2KA 1K8A1 4NBAA 4NBEA 2VPZA 5D1PA 4NBCA 2OTL1 4S1TA 3HOXI 3CPWY 5FLMI 1Y1WI 3CCR1 4A3BI 3IR7A 1VQP1 1Z03A 1W2BZ 3J81f 3MZKB 3CCL1 2QKDA 4QTUA 1WW9A 1Q16A 3GCFA 2GU2A 4MH4A 3G4S1 3NH8A 3G6E1 2PK7A 1Q7Y1 1VQ71 1VQLZ 4RVFA 2GTHA 3OW2Z 1YHQ1 1VQOZ 1VQ6Z 2JR6A 5D1OB 1VQKZ 3CCQ1 2R7ZI 3CMAZ 3HKZA 1K9M1 2E2JI 1S721 2J6AA 1NP6A 4A3II 2V8KA 2VPWA 4A3CI 1YI2Z 5T64A 3ESWA 4X6AI 3S1MI 2LEXA 2PM9A 4E33A 3EERA 3JAMf 2JA5I 1X3ZA 1WJ2A 1YJWZ 1VQO1 5FLXf 5CM2M 3KIHA 1X3WA 2K5RA 2V8JA 1Y1VS 4NB9A 3CXCY 3I4MI 3S1QI 1N8R2 3RZOI 2QLVB 5AN9F 5A2Qb 5C4JI 1RQFA 5D1OA 1VQ41 1YIT1 3J7A4 3CC7Z 3CCU1 2JIPA 2DE6A 1YUAA 1I6HI 1KRLA 1KD12 3H3VJ 3IF8A 1QYPA 1YUKA 2JIQA 2QRDB 2OTJZ 3CMEZ 3Q87A 1USPB 1JWHC 2DE5A 2QA41 3J81b 3GKQA 1VQNZ 3G711 2NVXI 3GTKI 1VQ91 2W03A 1TWGI 3CCVZ 1SFOI 3K7AI 5C3EI 3EEDA 3CCS1 4DGLA 1Q821 2JS4A 1KQSY 3I561 2I3CA 3BG1B 3QWUA 2V8IA 3S1RI 3F3FC 4HGYA 2W04A 3FKII 3VTNA 3LUSA 1M901 2R6MA 4NBDA 1I3QI 3MZLB 2EGTA 1I50I 2JIRA 1VQMZ 1USPA 1RNIA 3TE5B 3CCM1 3U50C 4E30A 1YJ91 1DL6A 4MONA 4HGZA 1Q862 4A3DI 3PO3I 3JAMb 2VUGA 1QF8A 1QVGZ 2QR1B 3MONA 4E2WA 5IT9b 5FLXb 1KD11 3HOYI 3RZDI 2VPYA 2RBLA 3M4OI 2M48A 2QREB 1TWFI 3GTPI 2JA7I 2E9HA 1VQ8Z 3NH4A 3H0GI 1VLAA 1JJ2Z 3CC2Z 2OZKA 3CCJZ 1QXFA 2KI7B 2NAPA 1Z01A
chains in the Genus database with same CATH topology
2OOXB 2E2II 3I55Z 1VQ5Z 1VQL1 4NBGA 3PO3S 2WB1A 1NJI1 4XX2A 1YJNZ 1K732 4A3EI 5IT9f 1QVFY 4BY1I 1VQ61 2NVQI 4A93I 1M1K2 3CCEZ 1VQK1 4MD9A 4RV9A 2YU9I 4DK1A 3CMA1 3NDJA 3VMHA 2H85A 1VQ81 3CD6Z 4Y7NI 3CQZI 3S2HI 3CPWZ 1R9TI 1YI21 1W2BY 1TWAI 3CCJ1 1YIJZ 4AYBA 4TNUA 3D6WA 4E2YA 2NVYI 2K3RA 1ZB8A 1WCMI 4NH1C 3CC4Z 2R92I 2RT9A 3HOZI 2DE7A 3FQQA 5T6BA 1YJW1 2BJOA 4RVDA 1Q7Y2 3IX0A 2GTIA 3S17I 3M3YI 3OW2Y 1RO4A 4EWCA 3CC71 1P9NA 1K9M2 2Y0SA 3GTGI 3BG0B 1ML8A 3I4NI 3GTMI 4A3JI 2RIQA 3CCRZ 3VB9A 1VQPZ 2OTJ1 3CME1 2Q51A 1TWHI 4BBSI 5IP9I 4A3GI 1L1OC 3J80f 4MXUA 1S7MA 1ZB9A 2O4HA 2JA8I 1Z02A 3G4SZ 4BY7I 1KC82 1VQN1 4A3KI 1K731 3G6EZ 4Y52I 3CXCZ 1VQ7Z 1N8R1 4E2XA 1WIIA 3CCV1 1YHQZ 4E31A 3P5JB 4QTTA 3VMGA 3CCQZ 3IFUA 2P28A 2LFUA 1S72Z 4NB8A 1RO2A 4NOZA 1RLYA 3GTMS 3HOVI 2RHBA 3GTOI 3S1NI 4MD7A 3S2DI 4BBRI 3FQMA 3NH5A 2Q4ZA 4NFRA 3NFZA 1VQM1 3HOUI 4RS4A 4HH4A 2LIYA 3TDHB 1N2FA 1X0TA 4MD8A 1NUIA 4RVGA 1Y1VI 3S16I 2IZ4A 5C44I 2HU9A 1Q812 2R93I 2VF1A 2JMOA 2VUMI 3GTJI 2B63I 2JA6I 1RO0A 2QEXZ 4A3MI 2WAQA 2E2HI 1Q822 2QRCB 1VQ4Z 3GTQI 1LQLA 1YITZ 1KQSZ 3I07A 3CCUZ 1K8A2 3S14I 2JNYA 2KPIA 2JUBA 1M902 2F4OA 1TWCI 3HOWI 3CC21 3F3PC 3T4NB 3S15I 5C4XI 1KC81 2PMZA 3VMIA 2P3YA 3I551 4RVHA 2QA4Z 1VQ51 1K83I 4NBFA 3J80b 2QEX1 4A3LI 3G71Z 1Q861 1YJN1 2NVTI 1VQ9Z 4E32A 1PFTA 5T67A 3CCE1 1QVGY 2YADA 4CL1A 3PO2I 3CD61 3KIFA 3CCSZ 5IP7I 3I56Z 4DQYB 3D9XA 2F4MA 1ZH1A 1YIJ1 4A3FI 5LL6f 1TFIA 2OTLZ 1JJ2Y 2AKLA 3GTLI 2HF1A 3CC41 4BXXI 4MRIA 2M6NA 2OOYB 3CCLZ 2ZAEB 3NDIA 1Q811 3CCMZ 2IZ3A 2RPRA 4NBBA 5A2Qf 1YJ9Z 1NJI2 2O53A 1QVFZ 1M1K1 4E2ZA 4NBHA 2G2KA 1K8A1 4NBAA 4NBEA 5D1PA 4NBCA 2OTL1 4S1TA 3HOXI 3CPWY 5FLMI 1Y1WI 3CCR1 4A3BI 1VQP1 1Z03A 1W2BZ 3J81f 3MZKB 3CCL1 2QKDA 4QTUA 1WW9A 3GCFA 2GU2A 4MH4A 3G4S1 3NH8A 3G6E1 2PK7A 1Q7Y1 1VQ71 1VQLZ 4RVFA 2GTHA 3OW2Z 1YHQ1 1VQOZ 1VQ6Z 2JR6A 5D1OB 1VQKZ 3CCQ1 2R7ZI 3CMAZ 3HKZA 1K9M1 2E2JI 1S721 2J6AA 1NP6A 4A3II 2V8KA 4A3CI 1YI2Z 5T64A 3ESWA 4X6AI 3S1MI 2PM9A 4E33A 3EERA 3JAMf 2JA5I 1X3ZA 1YJWZ 1VQO1 5FLXf 5CM2M 3KIHA 1X3WA 2K5RA 2V8JA 1Y1VS 4NB9A 3CXCY 3I4MI 3S1QI 1N8R2 3RZOI 2QLVB 5AN9F 5A2Qb 5C4JI 1RQFA 5D1OA 1VQ41 1YIT1 3J7A4 3CC7Z 3CCU1 2DE6A 1YUAA 1I6HI 1KRLA 1KD12 3H3VJ 3IF8A 1QYPA 1YUKA 2QRDB 2OTJZ 3CMEZ 3Q87A 1USPB 1JWHC 2DE5A 2QA41 3J81b 3GKQA 1VQNZ 3G711 2NVXI 3GTKI 1VQ91 2W03A 1TWGI 3CCVZ 1SFOI 3K7AI 5C3EI 3EEDA 3CCS1 4DGLA 1Q821 2JS4A 1KQSY 3I561 2I3CA 3BG1B 3QWUA 2V8IA 3S1RI 3F3FC 4HGYA 2W04A 3FKII 3VTNA 3LUSA 1M901 2R6MA 4NBDA 1I3QI 3MZLB 2EGTA 1I50I 1VQMZ 1USPA 1RNIA 3TE5B 3CCM1 3U50C 4E30A 1YJ91 1DL6A 4MONA 4HGZA 1Q862 4A3DI 3PO3I 3JAMb 2VUGA 1QF8A 1QVGZ 2QR1B 3MONA 4E2WA 5IT9b 5FLXb 1KD11 3HOYI 3RZDI 2RBLA 3M4OI 2M48A 2QREB 1TWFI 3GTPI 2JA7I 2E9HA 1VQ8Z 3NH4A 3H0GI 1VLAA 1JJ2Z 3CC2Z 2OZKA 3CCJZ 2KI7B 1Z01A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DE6 A;  4NB8 A;  1YUA A;  1I6H I;  4NBB A;  2E2I I;  3H3V J;  4NOZ A;  1RLY A;  3GTM S;  3HOV I;  4NBG A;  3GTO I;  3PO3 S;  3S1N I;  1QYP A;  4BBR I;  3S2D I;  4XX2 A;  4A93 I;  4A3E I;  2NVQ I;  4BY1 I;  3Q87 A;  4NBH A;  3HOU I;  2YU9 I;  1USP B;  2DE5 A;  3VMH A;  1N2F A;  4NBA A;  4NBE A;  1NUI A;  3S16 I;  1Y1V I;  4Y7N I;  4NBC A;  3CQZ I;  3GKQ A;  3HOX I;  3S2H I;  5FLM I;  2NVX I;  1Y1W I;  1R9T I;  5C44 I;  3GTK I;  4A3B I;  2R93 I;  1TWA I;  2VUM I;  1TWG I;  3GTJ I;  2B63 I;  2JA6 I;  3D6W A;  2NVY I;  4QTU A;  1WW9 A;  4A3M I;  1SFO I;  3K7A I;  1ZB8 A;  1WCM I;  3GCF A;  5C3E I;  2R92 I;  3HOZ I;  2DE7 A;  4MH4 A;  2E2H I;  3GTQ I;  1LQL A;  2JS4 A;  3I07 A;  2BJO A;  3S1R I;  2PK7 A;  3S14 I;  3FKI I;  3S17 I;  2JNY A;  2KPI A;  3LUS A;  3M3Y I;  2F4O A;  1TWC I;  4NBD A;  3HOW I;  1I3Q I;  3S15 I;  1RO4 A;  2JR6 A;  1I50 I;  5C4X I;  2R7Z I;  3GTG I;  1USP A;  2E2J I;  3VMI A;  3U50 C;  2J6A A;  4A3I I;  2P3Y A;  1DL6 A;  1K83 I;  1ML8 A;  4NBF A;  3I4N I;  3GTM I;  4A3C I;  4A3L I;  4A3J I;  4A3D I;  3PO3 I;  2NVT I;  3VB9 A;  3ESW A;  4X6A I;  1PFT A;  3S1M I;  1TWH I;  4BBS I;  5IP9 I;  4A3G I;  1L1O C;  3EER A;  3PO2 I;  1ZB9 A;  2JA8 I;  3HOY I;  3RZD I;  2JA5 I;  1X3Z A;  2RBL A;  5IP7 I;  3M4O I;  4BY7 I;  4A3K I;  5CM2 M;  1TWF I;  1X3W A;  2F4M A;  2K5R A;  3GTP I;  1Y1V S;  4NB9 A;  4A3F I;  2JA7 I;  4Y52 I;  3I4M I;  1TFI A;  3S1Q I;  2AKL A;  1VLA A;  3H0G I;  3GTL I;  3RZO I;  2HF1 A;  5C4J I;  4BXX I;  4QTT A;  3VMG A; 
#chains in the Genus database with same CATH topology
 1Y8C A;  2OOX B;  2E2I I;  3I55 Z;  1VQ5 Z;  1VQL 1;  4NBG A;  3PO3 S;  1SIW A;  2WB1 A;  1NJI 1;  4XX2 A;  1YJN Z;  1K73 2;  4A3E I;  5IT9 f;  1QVF Y;  4BY1 I;  1VQ6 1;  2NVQ I;  4A93 I;  1M1K 2;  3CCE Z;  1VQK 1;  4MD9 A;  4RV9 A;  2YU9 I;  4DK1 A;  3CMA 1;  3NDJ A;  3VMH A;  2H85 A;  1VQ8 1;  3CD6 Z;  4Y7N I;  3CQZ I;  3S2H I;  3CPW Z;  1FDO A;  1R9T I;  1YI2 1;  1W2B Y;  1TWA I;  3CCJ 1;  1YIJ Z;  4AYB A;  4TNU A;  3D6W A;  4E2Y A;  2NVY I;  2K3R A;  1ZB8 A;  1WCM I;  4NH1 C;  3CC4 Z;  2R92 I;  2RT9 A;  3HOZ I;  2DE7 A;  3FQQ A;  1AA6 A;  5T6B A;  1YJW 1;  2BJO A;  4RVD A;  1Q7Y 2;  3IX0 A;  2GTI A;  3S17 I;  3M3Y I;  3OW2 Y;  2V3V A;  1RO4 A;  4EWC A;  3CC7 1;  1P9N A;  1K9M 2;  2Y0S A;  3GTG I;  2E7Z A;  3BG0 B;  1ML8 A;  3I4N I;  3GTM I;  4A3J I;  2IV2 X;  2RIQ A;  3CCR Z;  3VB9 A;  1VQP Z;  2OTJ 1;  3CME 1;  2Q51 A;  1TWH I;  4BBS I;  5IP9 I;  4A3G I;  1L1O C;  3J80 f;  4MXU A;  1S7M A;  1ZB9 A;  2O4H A;  2JA8 I;  1Z02 A;  3G4S Z;  4BY7 I;  1KC8 2;  1VQN 1;  4A3K I;  2V45 A;  1K73 1;  3G6E Z;  4Y52 I;  1WZN A;  2AYD A;  3CXC Z;  1VQ7 Z;  1N8R 1;  4E2X A;  1WII A;  2VPX A;  3CCV 1;  1YHQ Z;  4E31 A;  3P5J B;  4QTT A;  3VMG A;  3CCQ Z;  3IFU A;  2P28 A;  2LFU A;  1S72 Z;  4NB8 A;  1RO2 A;  4NOZ A;  1RLY A;  3GTM S;  3HOV I;  2RHB A;  3GTO I;  3S1N I;  4MD7 A;  3S2D I;  4BBR I;  3FQM A;  3NH5 A;  2Q4Z A;  4NFR A;  3NFZ A;  1VQM 1;  3HOU I;  4RS4 A;  4HH4 A;  2LIY A;  3TDH B;  1N2F A;  1X0T A;  4MD8 A;  1NUI A;  4RVG A;  1Y1V I;  3S16 I;  2IZ4 A;  5C44 I;  2HU9 A;  1Q81 2;  2R93 I;  2VF1 A;  2JMO A;  2VUM I;  3GTJ I;  2B63 I;  2JA6 I;  1RO0 A;  2QEX Z;  4A3M I;  2WAQ A;  2E2H I;  1Q82 2;  2QRC B;  1VQ4 Z;  3GTQ I;  1LQL A;  1YIT Z;  1KQS Z;  3I07 A;  3CCU Z;  1K8A 2;  2JIM A;  3S14 I;  2JNY A;  2KPI A;  2JUB A;  1M90 2;  2F4O A;  1TWC I;  3HOW I;  3CC2 1;  3F3P C;  3T4N B;  3S15 I;  5C4X I;  1KC8 1;  2PMZ A;  3VMI A;  2P3Y A;  3I55 1;  4RVH A;  2QA4 Z;  1VQ5 1;  1K83 I;  4NBF A;  3J80 b;  2JIO A;  2QEX 1;  4A3L I;  3G71 Z;  1Q86 1;  1YJN 1;  2NVT I;  1VQ9 Z;  4E32 A;  1PFT A;  5T67 A;  3CCE 1;  1QVG Y;  2YAD A;  4CL1 A;  3PO2 I;  1FDI A;  3CD6 1;  3KIF A;  3CCS Z;  5IP7 I;  3I56 Z;  4DQY B;  3D9X A;  2F4M A;  1ZH1 A;  1YIJ 1;  4A3F I;  5LL6 f;  1TFI A;  2OTL Z;  3D2L A;  1JJ2 Y;  2AKL A;  3GTL I;  2HF1 A;  3CC4 1;  4BXX I;  4MRI A;  2M6N A;  2OOY B;  3CCL Z;  2ZAE B;  3NDI A;  1Q81 1;  3CCM Z;  2IZ3 A;  2RPR A;  4NBB A;  5A2Q f;  1YJ9 Z;  1NJI 2;  2O53 A;  1QVF Z;  1M1K 1;  4E2Z A;  4NBH A;  2G2K A;  1K8A 1;  4NBA A;  4NBE A;  2VPZ A;  5D1P A;  4NBC A;  2OTL 1;  4S1T A;  3HOX I;  3CPW Y;  5FLM I;  1Y1W I;  3CCR 1;  4A3B I;  3IR7 A;  1VQP 1;  1Z03 A;  1W2B Z;  3J81 f;  3MZK B;  3CCL 1;  2QKD A;  4QTU A;  1WW9 A;  1Q16 A;  3GCF A;  2GU2 A;  4MH4 A;  3G4S 1;  3NH8 A;  3G6E 1;  2PK7 A;  1Q7Y 1;  1VQ7 1;  1VQL Z;  4RVF A;  2GTH A;  3OW2 Z;  1YHQ 1;  1VQO Z;  1VQ6 Z;  2JR6 A;  5D1O B;  1VQK Z;  3CCQ 1;  2R7Z I;  3CMA Z;  3HKZ A;  1K9M 1;  2E2J I;  1S72 1;  2J6A A;  1NP6 A;  4A3I I;  2V8K A;  2VPW A;  4A3C I;  1YI2 Z;  5T64 A;  3ESW A;  4X6A I;  3S1M I;  2LEX A;  2PM9 A;  4E33 A;  3EER A;  3JAM f;  2JA5 I;  1X3Z A;  1WJ2 A;  1YJW Z;  1VQO 1;  5FLX f;  5CM2 M;  3KIH A;  1X3W A;  2K5R A;  2V8J A;  1Y1V S;  4NB9 A;  3CXC Y;  3I4M I;  3S1Q I;  1N8R 2;  3RZO I;  2QLV B;  5AN9 F;  5A2Q b;  5C4J I;  1RQF A;  5D1O A;  1VQ4 1;  1YIT 1;  3J7A 4;  3CC7 Z;  3CCU 1;  2JIP A;  2DE6 A;  1YUA A;  1I6H I;  1KRL A;  1KD1 2;  3H3V J;  3IF8 A;  1QYP A;  1YUK A;  2JIQ A;  2QRD B;  2OTJ Z;  3CME Z;  3Q87 A;  1USP B;  1JWH C;  2DE5 A;  2QA4 1;  3J81 b;  3GKQ A;  1VQN Z;  3G71 1;  2NVX I;  3GTK I;  1VQ9 1;  2W03 A;  1TWG I;  3CCV Z;  1SFO I;  3K7A I;  5C3E I;  3EED A;  3CCS 1;  4DGL A;  1Q82 1;  2JS4 A;  1KQS Y;  3I56 1;  2I3C A;  3BG1 B;  3QWU A;  2V8I A;  3S1R I;  3F3F C;  4HGY A;  2W04 A;  3FKI I;  3VTN A;  3LUS A;  1M90 1;  2R6M A;  4NBD A;  1I3Q I;  3MZL B;  2EGT A;  1I50 I;  2JIR A;  1VQM Z;  1USP A;  1RNI A;  3TE5 B;  3CCM 1;  3U50 C;  4E30 A;  1YJ9 1;  1DL6 A;  4MON A;  4HGZ A;  1Q86 2;  4A3D I;  3PO3 I;  3JAM b;  2VUG A;  1QF8 A;  1QVG Z;  2QR1 B;  3MON A;  4E2W A;  5IT9 b;  5FLX b;  1KD1 1;  3HOY I;  3RZD I;  2VPY A;  2RBL A;  3M4O I;  2M48 A;  2QRE B;  1TWF I;  3GTP I;  2JA7 I;  2E9H A;  1VQ8 Z;  3NH4 A;  3H0G I;  1VLA A;  1JJ2 Z;  3CC2 Z;  2OZK A;  3CCJ Z;  1QXF A;  2KI7 B;  2NAP A;  1Z01 A; 
#chains in the Genus database with same CATH homology
 2OOX B;  2E2I I;  3I55 Z;  1VQ5 Z;  1VQL 1;  4NBG A;  3PO3 S;  2WB1 A;  1NJI 1;  4XX2 A;  1YJN Z;  1K73 2;  4A3E I;  5IT9 f;  1QVF Y;  4BY1 I;  1VQ6 1;  2NVQ I;  4A93 I;  1M1K 2;  3CCE Z;  1VQK 1;  4MD9 A;  4RV9 A;  2YU9 I;  4DK1 A;  3CMA 1;  3NDJ A;  3VMH A;  2H85 A;  1VQ8 1;  3CD6 Z;  4Y7N I;  3CQZ I;  3S2H I;  3CPW Z;  1R9T I;  1YI2 1;  1W2B Y;  1TWA I;  3CCJ 1;  1YIJ Z;  4AYB A;  4TNU A;  3D6W A;  4E2Y A;  2NVY I;  2K3R A;  1ZB8 A;  1WCM I;  4NH1 C;  3CC4 Z;  2R92 I;  2RT9 A;  3HOZ I;  2DE7 A;  3FQQ A;  5T6B A;  1YJW 1;  2BJO A;  4RVD A;  1Q7Y 2;  3IX0 A;  2GTI A;  3S17 I;  3M3Y I;  3OW2 Y;  1RO4 A;  4EWC A;  3CC7 1;  1P9N A;  1K9M 2;  2Y0S A;  3GTG I;  3BG0 B;  1ML8 A;  3I4N I;  3GTM I;  4A3J I;  2RIQ A;  3CCR Z;  3VB9 A;  1VQP Z;  2OTJ 1;  3CME 1;  2Q51 A;  1TWH I;  4BBS I;  5IP9 I;  4A3G I;  1L1O C;  3J80 f;  4MXU A;  1S7M A;  1ZB9 A;  2O4H A;  2JA8 I;  1Z02 A;  3G4S Z;  4BY7 I;  1KC8 2;  1VQN 1;  4A3K I;  1K73 1;  3G6E Z;  4Y52 I;  3CXC Z;  1VQ7 Z;  1N8R 1;  4E2X A;  1WII A;  3CCV 1;  1YHQ Z;  4E31 A;  3P5J B;  4QTT A;  3VMG A;  3CCQ Z;  3IFU A;  2P28 A;  2LFU A;  1S72 Z;  4NB8 A;  1RO2 A;  4NOZ A;  1RLY A;  3GTM S;  3HOV I;  2RHB A;  3GTO I;  3S1N I;  4MD7 A;  3S2D I;  4BBR I;  3FQM A;  3NH5 A;  2Q4Z A;  4NFR A;  3NFZ A;  1VQM 1;  3HOU I;  4RS4 A;  4HH4 A;  2LIY A;  3TDH B;  1N2F A;  1X0T A;  4MD8 A;  1NUI A;  4RVG A;  1Y1V I;  3S16 I;  2IZ4 A;  5C44 I;  2HU9 A;  1Q81 2;  2R93 I;  2VF1 A;  2JMO A;  2VUM I;  3GTJ I;  2B63 I;  2JA6 I;  1RO0 A;  2QEX Z;  4A3M I;  2WAQ A;  2E2H I;  1Q82 2;  2QRC B;  1VQ4 Z;  3GTQ I;  1LQL A;  1YIT Z;  1KQS Z;  3I07 A;  3CCU Z;  1K8A 2;  3S14 I;  2JNY A;  2KPI A;  2JUB A;  1M90 2;  2F4O A;  1TWC I;  3HOW I;  3CC2 1;  3F3P C;  3T4N B;  3S15 I;  5C4X I;  1KC8 1;  2PMZ A;  3VMI A;  2P3Y A;  3I55 1;  4RVH A;  2QA4 Z;  1VQ5 1;  1K83 I;  4NBF A;  3J80 b;  2QEX 1;  4A3L I;  3G71 Z;  1Q86 1;  1YJN 1;  2NVT I;  1VQ9 Z;  4E32 A;  1PFT A;  5T67 A;  3CCE 1;  1QVG Y;  2YAD A;  4CL1 A;  3PO2 I;  3CD6 1;  3KIF A;  3CCS Z;  5IP7 I;  3I56 Z;  4DQY B;  3D9X A;  2F4M A;  1ZH1 A;  1YIJ 1;  4A3F I;  5LL6 f;  1TFI A;  2OTL Z;  1JJ2 Y;  2AKL A;  3GTL I;  2HF1 A;  3CC4 1;  4BXX I;  4MRI A;  2M6N A;  2OOY B;  3CCL Z;  2ZAE B;  3NDI A;  1Q81 1;  3CCM Z;  2IZ3 A;  2RPR A;  4NBB A;  5A2Q f;  1YJ9 Z;  1NJI 2;  2O53 A;  1QVF Z;  1M1K 1;  4E2Z A;  4NBH A;  2G2K A;  1K8A 1;  4NBA A;  4NBE A;  5D1P A;  4NBC A;  2OTL 1;  4S1T A;  3HOX I;  3CPW Y;  5FLM I;  1Y1W I;  3CCR 1;  4A3B I;  1VQP 1;  1Z03 A;  1W2B Z;  3J81 f;  3MZK B;  3CCL 1;  2QKD A;  4QTU A;  1WW9 A;  3GCF A;  2GU2 A;  4MH4 A;  3G4S 1;  3NH8 A;  3G6E 1;  2PK7 A;  1Q7Y 1;  1VQ7 1;  1VQL Z;  4RVF A;  2GTH A;  3OW2 Z;  1YHQ 1;  1VQO Z;  1VQ6 Z;  2JR6 A;  5D1O B;  1VQK Z;  3CCQ 1;  2R7Z I;  3CMA Z;  3HKZ A;  1K9M 1;  2E2J I;  1S72 1;  2J6A A;  1NP6 A;  4A3I I;  2V8K A;  4A3C I;  1YI2 Z;  5T64 A;  3ESW A;  4X6A I;  3S1M I;  2PM9 A;  4E33 A;  3EER A;  3JAM f;  2JA5 I;  1X3Z A;  1YJW Z;  1VQO 1;  5FLX f;  5CM2 M;  3KIH A;  1X3W A;  2K5R A;  2V8J A;  1Y1V S;  4NB9 A;  3CXC Y;  3I4M I;  3S1Q I;  1N8R 2;  3RZO I;  2QLV B;  5AN9 F;  5A2Q b;  5C4J I;  1RQF A;  5D1O A;  1VQ4 1;  1YIT 1;  3J7A 4;  3CC7 Z;  3CCU 1;  2DE6 A;  1YUA A;  1I6H I;  1KRL A;  1KD1 2;  3H3V J;  3IF8 A;  1QYP A;  1YUK A;  2QRD B;  2OTJ Z;  3CME Z;  3Q87 A;  1USP B;  1JWH C;  2DE5 A;  2QA4 1;  3J81 b;  3GKQ A;  1VQN Z;  3G71 1;  2NVX I;  3GTK I;  1VQ9 1;  2W03 A;  1TWG I;  3CCV Z;  1SFO I;  3K7A I;  5C3E I;  3EED A;  3CCS 1;  4DGL A;  1Q82 1;  2JS4 A;  1KQS Y;  3I56 1;  2I3C A;  3BG1 B;  3QWU A;  2V8I A;  3S1R I;  3F3F C;  4HGY A;  2W04 A;  3FKI I;  3VTN A;  3LUS A;  1M90 1;  2R6M A;  4NBD A;  1I3Q I;  3MZL B;  2EGT A;  1I50 I;  1VQM Z;  1USP A;  1RNI A;  3TE5 B;  3CCM 1;  3U50 C;  4E30 A;  1YJ9 1;  1DL6 A;  4MON A;  4HGZ A;  1Q86 2;  4A3D I;  3PO3 I;  3JAM b;  2VUG A;  1QF8 A;  1QVG Z;  2QR1 B;  3MON A;  4E2W A;  5IT9 b;  5FLX b;  1KD1 1;  3HOY I;  3RZD I;  2RBL A;  3M4O I;  2M48 A;  2QRE B;  1TWF I;  3GTP I;  2JA7 I;  2E9H A;  1VQ8 Z;  3NH4 A;  3H0G I;  1VLA A;  1JJ2 Z;  3CC2 Z;  2OZK A;  3CCJ Z;  2KI7 B;  1Z01 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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