5C44I

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule tags Transferase/dna/rna
source organism Saccharomyces cerevisiae (strain atcc 204508 / s288c)
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 9
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c44I02
4NBFA 3S1RI 4MH4A 3HOUI 3VMHA 4NBGA 4QTTA 3H0GI 2RBLA 3S16I 1YUAA 3CQZI 4A3MI 4A3II 4BY1I 3HOZI 1WW9A 4BBRI 1I50I 2JA8I 1Y1VS 4XX2A 2KPIA 1RO4A 4Y7NI 3S1NI 3S1MI 2JA6I 1USPA 4NBDA 3GTMI 2JS4A 1NUIA 4NBBA 3VMIA 2K5RA 4X6AI 3Q87A 5FLMI 1N2FA 1QYPA 2F4MA 2AKLA 3VMGA 2J6AA 4NB8A 2B63I 3GTQI 3GCFA 3FKII 1Y1VI 2E2HI 1L1OC 1TWFI 2NVYI 1RLYA 2NVXI 3H3VJ 1TWHI 3S2HI 3M4OI 3RZOI 3VB9A 3GTOI 3S14I 1ML8A 3HOXI 4Y52I 2NVTI 3GTGI 2JNYA 3PO3S 2VUMI 5C44I 2E2II 4A3KI 1VLAA 1K83I 1I6HI 3D6WA 4BY7I 2R7ZI 4NB9A 3GTKI 1LQLA 4A3FI 5C4JI 1I3QI 3RZDI 3S15I 1ZB9A 3GTLI 1USPB 4NBAA 3PO2I 2BJOA 2DE7A 5CM2M 3HOYI 1TFIA 1WCMI 3EERA 2JR6A 4A3EI 5IP9I 5IP7I 4BXXI 3PO3I 4A3CI 2DE6A 3I4NI 2PK7A 2P3YA 1SFOI 2DE5A 4A3GI 4A93I 3GTMS 3I4MI 4NOZA 1TWGI 2E2JI 3U50C 3M3YI 3S2DI 2HF1A 3LUSA 3GKQA 1TWCI 1DL6A 3S1QI 4A3LI 2JA7I 3ESWA 5C4XI 2F4OA 1X3WA 4A3DI 2R93I 2YU9I 4BBSI 2NVQI 4NBHA 1R9TI 1X3ZA 1ZB8A 3GTJI 2JA5I 3K7AI 4NBEA 5C3EI 1Y1WI 2R92I 4NBCA 3HOVI 3I07A 1TWAI 4QTUA 3S17I 1PFTA 3HOWI 4A3BI 4A3JI 3GTPI
chains in the Genus database with same CATH superfamily
1NJI1 3CMEZ 2VPXA 4NBGA 3I55Z 1Q812 4RVFA 5IT9b 1VQK1 4A3MI 3CCQZ 1I50I 2JA8I 3S1NI 4XX2A 2KPIA 3G711 2KI7B 4NBDA 1SIWA 2V45A 1YUKA 4NBBA 1N8R2 1VQKZ 2JIRA 3NDJA 2WB1A 4E33A 1K8A1 2M48A 3G71Z 5D1PA 2B63I 3GCFA 3MONA 3FKII 1VQ51 1Y1VI 3NH8A 2VUGA 1TWFI 2M6NA 1TWHI 3S2HI 3M4OI 1RO0A 4HGYA 2O53A 1ML8A 5D1OB 3HOXI 1X0TA 3BG1B 1VQ5Z 4Y52I 1VQ61 2VF1A 1S7MA 1WIIA 5C44I 4A3KI 3CC41 1Q822 2R7ZI 4NB9A 1QVFZ 1FDIA 5C4JI 3CMA1 3S15I 2OTL1 1VQ6Z 1Z01A 2JR6A 3CC4Z 4A3EI 3IFUA 1QVFY 3CMAZ 4EWCA 4CL1A 3TE5B 2OTLZ 2PMZA 1M1K1 4MD9A 2V8KA 4E2YA 1K731 4A93I 1KC81 3GTMS 2WAQA 5FLXb 1TWCI 3CCJ1 4A3LI 4HGZA 3ESWA 2JIMA 2F4OA 1X3WA 2IZ3A 2YU9I 2NVQI 2H85A 1R9TI 3I561 1WJ2A 3J81f 2OTJ1 2JA5I 1S721 5C3EI 3CPWY 4NBCA 5T6BA 1TWAI 2V8JA 2RT9A 4E32A 4A3BI 3GTPI 4NBFA 3S1RI 3I56Z 2EGTA 2OTJZ 1RQFA 1S72Z 2QREB 3H0GI 3FQQA 3S16I 1YUAA 1WZNA 3CQZI 2Q4ZA 4BY1I 4RVGA 3HOZI 1WW9A 2QKDA 1Y1VS 3GTMI 2K5RA 3Q87A 3CCV1 2E7ZA 3D9XA 1VQL1 3CCL1 1YJW1 3J7A4 4DK1A 3VMGA 4NB8A 2YADA 4E2ZA 1K8A2 2E2HI 1L1OC 3CCVZ 5T64A 1RLYA 3CCR1 2RIQA 3T4NB 1VQLZ 3CCLZ 1YJWZ 2NVXI 3H3VJ 4E30A 3VB9A 2JIOA 3JAMf 4E2WA 2JNYA 2VUMI 3CCRZ 1K9M2 1I6HI 4BY7I 3GTKI 3KIFA 1LQLA 4A3FI 3IR7A 1AA6A 1ZB9A 1USPB 4NBAA 2BJOA 2DE7A 2OOXB 3HOYI 1KD11 4MONA 3G4S1 3FQMA 1YHQ1 1W2BZ 2QA41 3PO3I 4A3CI 3CCE1 4MRIA 1K9M1 1QF8A 5A2Qb 2DE6A 4S1TA 3I4NI 4AYBA 3G4SZ 2P3YA 2JMOA 3CCU1 3J80b 2QA4Z 1YHQZ 1W2BY 1VQO1 3I4MI 1M1K2 2E2JI 3U50C 3CCEZ 3S2DI 3LUSA 1K732 1VQ81 1KC82 2RPRA 3VTNA 2HU9A 4RVDA 3CCUZ 5C4XI 1VQOZ 4DQYB 1VQ8Z 5LL6f 1M901 3P5JB 2R92I 1VQM1 3BG0B 3HOWI 4A3JI 2O4HA 3HOUI 4E2XA 2ZAEB 2LFUA 4QTTA 1RO2A 3NFZA 4NH1C 3CC21 1VQMZ 3CPWZ 4A3II 5IT9f 4Y7NI 1Q7Y1 3MZKB 2JA6I 3CC71 2JS4A 4X6AI 3CC2Z 5FLMI 2K3RA 4RS4A 2GU2A 2AKLA 4E31A 3CC7Z 3GTQI 4MD7A 3TDHB 1VQN1 2NVYI 5T67A 2V3VA 3S14I 2G2KA 2R6MA 1VQNZ 3PO3S 4HH4A 2E2II 3D6WA 1Q861 1YJ91 1YIJ1 1KQSZ 3PO2I 3G6EZ 1WCMI 2IV2X 3EERA 3OW2Z 5IP9I 4BXXI 1YJ9Z 4MD8A 1YIJZ 1VQP1 1KQSY 1KD12 1QXFA 2RHBA 4RVHA 1Z02A 3IF8A 2PK7A 3OW2Y 2DE5A 4DGLA 4A3GI 2Y0SA 4NOZA 1TWGI 1VQPZ 2NAPA 3M3YI 3IX0A 3NH4A 5FLXf 3NDIA 3CCS1 3CCM1 3S1QI 1VQ9Z 5AN9F 3QWUA 4A3DI 4BBSI 2GTHA 2LIYA 4NBHA 2E9HA 3J81b 1X3ZA 3CCSZ 3CCMZ 3CXCZ 3K7AI 2V8IA 3I07A 4QTUA 3S17I 3CD61 1YJN1 1M902 1Q811 1JJ2Z 4MH4A 4NFRA 3CXCY 3VMHA 2JIQA 2RBLA 1Z03A 1YIT1 1FDOA 1Y8CA 2OOYB 1YJNZ 2W04A 2GTIA 2QEX1 3CD6Z 2W03A 1JJ2Y 2I3CA 4BBRI 1RO4A 1N8R1 3S1MI 1USPA 1VQ41 2PM9A 3F3FC 1NUIA 3VMIA 1VQ71 2AYDA 2QRDB 1Q7Y2 1YITZ 1N2FA 2OZKA 1QYPA 2F4MA 2QEXZ 1NP6A 1ZH1A 2JIPA 2J6AA 3F3PC 1KRLA 5D1OA 3NH5A 1VQ4Z 2IZ4A 3MZLB 1VQ7Z 1RNIA 3RZOI 3JAMb 3GTOI 2QR1B 1Q821 2NVTI 3GTGI 1Q16A 3EEDA 1VLAA 1K83I 1I3QI 3RZDI 3GTLI 4RV9A 1Q862 5CM2M 1P9NA 1TFIA 2VPZA 4TNUA 5IP7I 3CCJZ 3KIHA 2QRCB 2LEXA 2P28A 1SFOI 5A2Qf 1QVGZ 3G6E1 2Q51A 2VPYA 3J80f 2HF1A 3GKQA 1DL6A 2QLVB 3D2LA 1NJI2 2JA7I 1QVGY 2R93I 1YI21 2JUBA 1ZB8A 3GTJI 3CME1 1JWHC 4NBEA 3I551 1Y1WI 3HOVI 1VQ91 2VPWA 1PFTA 4MXUA 3CCQ1 1YI2Z 3HKZA
chains in the Genus database with same CATH topology
1NJI1 3CMEZ 4NBGA 3I55Z 1Q812 4RVFA 5IT9b 1VQK1 4A3MI 3CCQZ 1I50I 2JA8I 3S1NI 4XX2A 2KPIA 3G711 2KI7B 4NBDA 1YUKA 4NBBA 1N8R2 1VQKZ 3NDJA 2WB1A 4E33A 1K8A1 2M48A 3G71Z 5D1PA 2B63I 3GCFA 3MONA 3FKII 1VQ51 1Y1VI 3NH8A 2VUGA 1TWFI 2M6NA 1TWHI 3S2HI 3M4OI 1RO0A 4HGYA 2O53A 1ML8A 5D1OB 3HOXI 1X0TA 3BG1B 1VQ5Z 4Y52I 1VQ61 2VF1A 1S7MA 1WIIA 5C44I 4A3KI 3CC41 1Q822 2R7ZI 4NB9A 1QVFZ 5C4JI 3CMA1 3S15I 2OTL1 1VQ6Z 1Z01A 2JR6A 3CC4Z 4A3EI 3IFUA 1QVFY 3CMAZ 4EWCA 4CL1A 3TE5B 2OTLZ 2PMZA 1M1K1 4MD9A 2V8KA 4E2YA 1K731 4A93I 1KC81 3GTMS 2WAQA 5FLXb 1TWCI 3CCJ1 4A3LI 4HGZA 3ESWA 2F4OA 1X3WA 2IZ3A 2YU9I 2NVQI 2H85A 1R9TI 3I561 3J81f 2OTJ1 2JA5I 1S721 5C3EI 3CPWY 4NBCA 5T6BA 1TWAI 2V8JA 2RT9A 4E32A 4A3BI 3GTPI 4NBFA 3S1RI 3I56Z 2EGTA 2OTJZ 1RQFA 1S72Z 2QREB 3H0GI 3FQQA 3S16I 1YUAA 3CQZI 2Q4ZA 4BY1I 4RVGA 3HOZI 1WW9A 2QKDA 1Y1VS 3GTMI 2K5RA 3Q87A 3CCV1 3D9XA 1VQL1 3CCL1 1YJW1 3J7A4 4DK1A 3VMGA 4NB8A 2YADA 4E2ZA 1K8A2 2E2HI 1L1OC 3CCVZ 5T64A 1RLYA 3CCR1 2RIQA 3T4NB 1VQLZ 3CCLZ 1YJWZ 2NVXI 3H3VJ 4E30A 3VB9A 3JAMf 4E2WA 2JNYA 2VUMI 3CCRZ 1K9M2 1I6HI 4BY7I 3GTKI 3KIFA 1LQLA 4A3FI 1ZB9A 1USPB 4NBAA 2BJOA 2DE7A 2OOXB 3HOYI 1KD11 4MONA 3G4S1 3FQMA 1YHQ1 1W2BZ 2QA41 3PO3I 4A3CI 3CCE1 4MRIA 1K9M1 1QF8A 5A2Qb 2DE6A 4S1TA 3I4NI 4AYBA 3G4SZ 2P3YA 2JMOA 3CCU1 3J80b 2QA4Z 1YHQZ 1W2BY 1VQO1 3I4MI 1M1K2 2E2JI 3U50C 3CCEZ 3S2DI 3LUSA 1K732 1VQ81 1KC82 2RPRA 3VTNA 2HU9A 4RVDA 3CCUZ 5C4XI 1VQOZ 4DQYB 1VQ8Z 5LL6f 1M901 3P5JB 2R92I 1VQM1 3BG0B 3HOWI 4A3JI 2O4HA 3HOUI 4E2XA 2ZAEB 2LFUA 4QTTA 1RO2A 3NFZA 4NH1C 3CC21 1VQMZ 3CPWZ 4A3II 5IT9f 4Y7NI 1Q7Y1 3MZKB 2JA6I 3CC71 2JS4A 4X6AI 3CC2Z 5FLMI 2K3RA 4RS4A 2GU2A 2AKLA 4E31A 3CC7Z 3GTQI 4MD7A 3TDHB 1VQN1 2NVYI 5T67A 3S14I 2G2KA 2R6MA 1VQNZ 3PO3S 4HH4A 2E2II 3D6WA 1Q861 1YJ91 1YIJ1 1KQSZ 3PO2I 3G6EZ 1WCMI 3EERA 3OW2Z 5IP9I 4BXXI 1YJ9Z 4MD8A 1YIJZ 1VQP1 1KQSY 1KD12 2RHBA 4RVHA 1Z02A 3IF8A 2PK7A 3OW2Y 2DE5A 4DGLA 4A3GI 2Y0SA 4NOZA 1TWGI 1VQPZ 3M3YI 3IX0A 3NH4A 5FLXf 3NDIA 3CCS1 3CCM1 3S1QI 1VQ9Z 5AN9F 3QWUA 4A3DI 4BBSI 2GTHA 2LIYA 4NBHA 2E9HA 3J81b 1X3ZA 3CCSZ 3CCMZ 3CXCZ 3K7AI 2V8IA 3I07A 4QTUA 3S17I 3CD61 1YJN1 1M902 1Q811 1JJ2Z 4MH4A 4NFRA 3CXCY 3VMHA 2RBLA 1Z03A 1YIT1 1YJNZ 3CD6Z 2OOYB 2W04A 2GTIA 2QEX1 2W03A 1JJ2Y 2I3CA 4BBRI 1RO4A 1N8R1 3S1MI 1USPA 1VQ41 2PM9A 3F3FC 1NUIA 3VMIA 1VQ71 2QRDB 1Q7Y2 1YITZ 1N2FA 2OZKA 1QYPA 2F4MA 2QEXZ 1NP6A 1ZH1A 2J6AA 3F3PC 1KRLA 5D1OA 3NH5A 1VQ4Z 2IZ4A 3MZLB 1VQ7Z 1RNIA 3RZOI 3JAMb 3GTOI 2QR1B 1Q821 2NVTI 3GTGI 3EEDA 1VLAA 1K83I 1I3QI 3RZDI 3GTLI 4RV9A 1Q862 5CM2M 1P9NA 1TFIA 4TNUA 5IP7I 3CCJZ 3KIHA 2QRCB 2P28A 1SFOI 5A2Qf 1QVGZ 3G6E1 2Q51A 3J80f 2HF1A 3GKQA 1DL6A 2QLVB 1NJI2 2JA7I 1QVGY 2R93I 1YI21 2JUBA 1ZB8A 3GTJI 3CME1 1JWHC 4NBEA 3I551 1Y1WI 3HOVI 1VQ91 1PFTA 4MXUA 3CCQ1 1YI2Z 3HKZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NBF A;  3S1R I;  4MH4 A;  3HOU I;  3VMH A;  4NBG A;  4QTT A;  3H0G I;  2RBL A;  3S16 I;  1YUA A;  3CQZ I;  4A3M I;  4A3I I;  4BY1 I;  3HOZ I;  1WW9 A;  4BBR I;  1I50 I;  2JA8 I;  1Y1V S;  4XX2 A;  2KPI A;  1RO4 A;  4Y7N I;  3S1N I;  3S1M I;  2JA6 I;  1USP A;  4NBD A;  3GTM I;  2JS4 A;  1NUI A;  4NBB A;  3VMI A;  2K5R A;  4X6A I;  3Q87 A;  5FLM I;  1N2F A;  1QYP A;  2F4M A;  2AKL A;  3VMG A;  2J6A A;  4NB8 A;  2B63 I;  3GTQ I;  3GCF A;  3FKI I;  1Y1V I;  2E2H I;  1L1O C;  1TWF I;  2NVY I;  1RLY A;  2NVX I;  3H3V J;  1TWH I;  3S2H I;  3M4O I;  3RZO I;  3VB9 A;  3GTO I;  3S14 I;  1ML8 A;  3HOX I;  4Y52 I;  2NVT I;  3GTG I;  2JNY A;  3PO3 S;  2VUM I;  5C44 I;  2E2I I;  4A3K I;  1VLA A;  1K83 I;  1I6H I;  3D6W A;  4BY7 I;  2R7Z I;  4NB9 A;  3GTK I;  1LQL A;  4A3F I;  5C4J I;  1I3Q I;  3RZD I;  3S15 I;  1ZB9 A;  3GTL I;  1USP B;  4NBA A;  3PO2 I;  2BJO A;  2DE7 A;  5CM2 M;  3HOY I;  1TFI A;  1WCM I;  3EER A;  2JR6 A;  4A3E I;  5IP9 I;  5IP7 I;  4BXX I;  3PO3 I;  4A3C I;  2DE6 A;  3I4N I;  2PK7 A;  2P3Y A;  1SFO I;  2DE5 A;  4A3G I;  4A93 I;  3GTM S;  3I4M I;  4NOZ A;  1TWG I;  2E2J I;  3U50 C;  3M3Y I;  3S2D I;  2HF1 A;  3LUS A;  3GKQ A;  1TWC I;  1DL6 A;  3S1Q I;  4A3L I;  2JA7 I;  3ESW A;  5C4X I;  2F4O A;  1X3W A;  4A3D I;  2R93 I;  2YU9 I;  4BBS I;  2NVQ I;  4NBH A;  1R9T I;  1X3Z A;  1ZB8 A;  3GTJ I;  2JA5 I;  3K7A I;  4NBE A;  5C3E I;  1Y1W I;  2R92 I;  4NBC A;  3HOV I;  3I07 A;  1TWA I;  4QTU A;  3S17 I;  1PFT A;  3HOW I;  4A3B I;  4A3J I;  3GTP I; 
#chains in the Genus database with same CATH topology
 1NJI 1;  3CME Z;  2VPX A;  4NBG A;  3I55 Z;  1Q81 2;  4RVF A;  5IT9 b;  1VQK 1;  4A3M I;  3CCQ Z;  1I50 I;  2JA8 I;  3S1N I;  4XX2 A;  2KPI A;  3G71 1;  2KI7 B;  4NBD A;  1SIW A;  2V45 A;  1YUK A;  4NBB A;  1N8R 2;  1VQK Z;  2JIR A;  3NDJ A;  2WB1 A;  4E33 A;  1K8A 1;  2M48 A;  3G71 Z;  5D1P A;  2B63 I;  3GCF A;  3MON A;  3FKI I;  1VQ5 1;  1Y1V I;  3NH8 A;  2VUG A;  1TWF I;  2M6N A;  1TWH I;  3S2H I;  3M4O I;  1RO0 A;  4HGY A;  2O53 A;  1ML8 A;  5D1O B;  3HOX I;  1X0T A;  3BG1 B;  1VQ5 Z;  4Y52 I;  1VQ6 1;  2VF1 A;  1S7M A;  1WII A;  5C44 I;  4A3K I;  3CC4 1;  1Q82 2;  2R7Z I;  4NB9 A;  1QVF Z;  1FDI A;  5C4J I;  3CMA 1;  3S15 I;  2OTL 1;  1VQ6 Z;  1Z01 A;  2JR6 A;  3CC4 Z;  4A3E I;  3IFU A;  1QVF Y;  3CMA Z;  4EWC A;  4CL1 A;  3TE5 B;  2OTL Z;  2PMZ A;  1M1K 1;  4MD9 A;  2V8K A;  4E2Y A;  1K73 1;  4A93 I;  1KC8 1;  3GTM S;  2WAQ A;  5FLX b;  1TWC I;  3CCJ 1;  4A3L I;  4HGZ A;  3ESW A;  2JIM A;  2F4O A;  1X3W A;  2IZ3 A;  2YU9 I;  2NVQ I;  2H85 A;  1R9T I;  3I56 1;  1WJ2 A;  3J81 f;  2OTJ 1;  2JA5 I;  1S72 1;  5C3E I;  3CPW Y;  4NBC A;  5T6B A;  1TWA I;  2V8J A;  2RT9 A;  4E32 A;  4A3B I;  3GTP I;  4NBF A;  3S1R I;  3I56 Z;  2EGT A;  2OTJ Z;  1RQF A;  1S72 Z;  2QRE B;  3H0G I;  3FQQ A;  3S16 I;  1YUA A;  1WZN A;  3CQZ I;  2Q4Z A;  4BY1 I;  4RVG A;  3HOZ I;  1WW9 A;  2QKD A;  1Y1V S;  3GTM I;  2K5R A;  3Q87 A;  3CCV 1;  2E7Z A;  3D9X A;  1VQL 1;  3CCL 1;  1YJW 1;  3J7A 4;  4DK1 A;  3VMG A;  4NB8 A;  2YAD A;  4E2Z A;  1K8A 2;  2E2H I;  1L1O C;  3CCV Z;  5T64 A;  1RLY A;  3CCR 1;  2RIQ A;  3T4N B;  1VQL Z;  3CCL Z;  1YJW Z;  2NVX I;  3H3V J;  4E30 A;  3VB9 A;  2JIO A;  3JAM f;  4E2W A;  2JNY A;  2VUM I;  3CCR Z;  1K9M 2;  1I6H I;  4BY7 I;  3GTK I;  3KIF A;  1LQL A;  4A3F I;  3IR7 A;  1AA6 A;  1ZB9 A;  1USP B;  4NBA A;  2BJO A;  2DE7 A;  2OOX B;  3HOY I;  1KD1 1;  4MON A;  3G4S 1;  3FQM A;  1YHQ 1;  1W2B Z;  2QA4 1;  3PO3 I;  4A3C I;  3CCE 1;  4MRI A;  1K9M 1;  1QF8 A;  5A2Q b;  2DE6 A;  4S1T A;  3I4N I;  4AYB A;  3G4S Z;  2P3Y A;  2JMO A;  3CCU 1;  3J80 b;  2QA4 Z;  1YHQ Z;  1W2B Y;  1VQO 1;  3I4M I;  1M1K 2;  2E2J I;  3U50 C;  3CCE Z;  3S2D I;  3LUS A;  1K73 2;  1VQ8 1;  1KC8 2;  2RPR A;  3VTN A;  2HU9 A;  4RVD A;  3CCU Z;  5C4X I;  1VQO Z;  4DQY B;  1VQ8 Z;  5LL6 f;  1M90 1;  3P5J B;  2R92 I;  1VQM 1;  3BG0 B;  3HOW I;  4A3J I;  2O4H A;  3HOU I;  4E2X A;  2ZAE B;  2LFU A;  4QTT A;  1RO2 A;  3NFZ A;  4NH1 C;  3CC2 1;  1VQM Z;  3CPW Z;  4A3I I;  5IT9 f;  4Y7N I;  1Q7Y 1;  3MZK B;  2JA6 I;  3CC7 1;  2JS4 A;  4X6A I;  3CC2 Z;  5FLM I;  2K3R A;  4RS4 A;  2GU2 A;  2AKL A;  4E31 A;  3CC7 Z;  3GTQ I;  4MD7 A;  3TDH B;  1VQN 1;  2NVY I;  5T67 A;  2V3V A;  3S14 I;  2G2K A;  2R6M A;  1VQN Z;  3PO3 S;  4HH4 A;  2E2I I;  3D6W A;  1Q86 1;  1YJ9 1;  1YIJ 1;  1KQS Z;  3PO2 I;  3G6E Z;  1WCM I;  2IV2 X;  3EER A;  3OW2 Z;  5IP9 I;  4BXX I;  1YJ9 Z;  4MD8 A;  1YIJ Z;  1VQP 1;  1KQS Y;  1KD1 2;  1QXF A;  2RHB A;  4RVH A;  1Z02 A;  3IF8 A;  2PK7 A;  3OW2 Y;  2DE5 A;  4DGL A;  4A3G I;  2Y0S A;  4NOZ A;  1TWG I;  1VQP Z;  2NAP A;  3M3Y I;  3IX0 A;  3NH4 A;  5FLX f;  3NDI A;  3CCS 1;  3CCM 1;  3S1Q I;  1VQ9 Z;  5AN9 F;  3QWU A;  4A3D I;  4BBS I;  2GTH A;  2LIY A;  4NBH A;  2E9H A;  3J81 b;  1X3Z A;  3CCS Z;  3CCM Z;  3CXC Z;  3K7A I;  2V8I A;  3I07 A;  4QTU A;  3S17 I;  3CD6 1;  1YJN 1;  1M90 2;  1Q81 1;  1JJ2 Z;  4MH4 A;  4NFR A;  3CXC Y;  3VMH A;  2JIQ A;  2RBL A;  1Z03 A;  1YIT 1;  1FDO A;  1Y8C A;  2OOY B;  1YJN Z;  2W04 A;  2GTI A;  2QEX 1;  3CD6 Z;  2W03 A;  1JJ2 Y;  2I3C A;  4BBR I;  1RO4 A;  1N8R 1;  3S1M I;  1USP A;  1VQ4 1;  2PM9 A;  3F3F C;  1NUI A;  3VMI A;  1VQ7 1;  2AYD A;  2QRD B;  1Q7Y 2;  1YIT Z;  1N2F A;  2OZK A;  1QYP A;  2F4M A;  2QEX Z;  1NP6 A;  1ZH1 A;  2JIP A;  2J6A A;  3F3P C;  1KRL A;  5D1O A;  3NH5 A;  1VQ4 Z;  2IZ4 A;  3MZL B;  1VQ7 Z;  1RNI A;  3RZO I;  3JAM b;  3GTO I;  2QR1 B;  1Q82 1;  2NVT I;  3GTG I;  1Q16 A;  3EED A;  1VLA A;  1K83 I;  1I3Q I;  3RZD I;  3GTL I;  4RV9 A;  1Q86 2;  5CM2 M;  1P9N A;  1TFI A;  2VPZ A;  4TNU A;  5IP7 I;  3CCJ Z;  3KIH A;  2QRC B;  2LEX A;  2P28 A;  1SFO I;  5A2Q f;  1QVG Z;  3G6E 1;  2Q51 A;  2VPY A;  3J80 f;  2HF1 A;  3GKQ A;  1DL6 A;  2QLV B;  3D2L A;  1NJI 2;  2JA7 I;  1QVG Y;  2R93 I;  1YI2 1;  2JUB A;  1ZB8 A;  3GTJ I;  3CME 1;  1JWH C;  4NBE A;  3I55 1;  1Y1W I;  3HOV I;  1VQ9 1;  2VPW A;  1PFT A;  4MXU A;  3CCQ 1;  1YI2 Z;  3HKZ A; 
#chains in the Genus database with same CATH homology
 1NJI 1;  3CME Z;  4NBG A;  3I55 Z;  1Q81 2;  4RVF A;  5IT9 b;  1VQK 1;  4A3M I;  3CCQ Z;  1I50 I;  2JA8 I;  3S1N I;  4XX2 A;  2KPI A;  3G71 1;  2KI7 B;  4NBD A;  1YUK A;  4NBB A;  1N8R 2;  1VQK Z;  3NDJ A;  2WB1 A;  4E33 A;  1K8A 1;  2M48 A;  3G71 Z;  5D1P A;  2B63 I;  3GCF A;  3MON A;  3FKI I;  1VQ5 1;  1Y1V I;  3NH8 A;  2VUG A;  1TWF I;  2M6N A;  1TWH I;  3S2H I;  3M4O I;  1RO0 A;  4HGY A;  2O53 A;  1ML8 A;  5D1O B;  3HOX I;  1X0T A;  3BG1 B;  1VQ5 Z;  4Y52 I;  1VQ6 1;  2VF1 A;  1S7M A;  1WII A;  5C44 I;  4A3K I;  3CC4 1;  1Q82 2;  2R7Z I;  4NB9 A;  1QVF Z;  5C4J I;  3CMA 1;  3S15 I;  2OTL 1;  1VQ6 Z;  1Z01 A;  2JR6 A;  3CC4 Z;  4A3E I;  3IFU A;  1QVF Y;  3CMA Z;  4EWC A;  4CL1 A;  3TE5 B;  2OTL Z;  2PMZ A;  1M1K 1;  4MD9 A;  2V8K A;  4E2Y A;  1K73 1;  4A93 I;  1KC8 1;  3GTM S;  2WAQ A;  5FLX b;  1TWC I;  3CCJ 1;  4A3L I;  4HGZ A;  3ESW A;  2F4O A;  1X3W A;  2IZ3 A;  2YU9 I;  2NVQ I;  2H85 A;  1R9T I;  3I56 1;  3J81 f;  2OTJ 1;  2JA5 I;  1S72 1;  5C3E I;  3CPW Y;  4NBC A;  5T6B A;  1TWA I;  2V8J A;  2RT9 A;  4E32 A;  4A3B I;  3GTP I;  4NBF A;  3S1R I;  3I56 Z;  2EGT A;  2OTJ Z;  1RQF A;  1S72 Z;  2QRE B;  3H0G I;  3FQQ A;  3S16 I;  1YUA A;  3CQZ I;  2Q4Z A;  4BY1 I;  4RVG A;  3HOZ I;  1WW9 A;  2QKD A;  1Y1V S;  3GTM I;  2K5R A;  3Q87 A;  3CCV 1;  3D9X A;  1VQL 1;  3CCL 1;  1YJW 1;  3J7A 4;  4DK1 A;  3VMG A;  4NB8 A;  2YAD A;  4E2Z A;  1K8A 2;  2E2H I;  1L1O C;  3CCV Z;  5T64 A;  1RLY A;  3CCR 1;  2RIQ A;  3T4N B;  1VQL Z;  3CCL Z;  1YJW Z;  2NVX I;  3H3V J;  4E30 A;  3VB9 A;  3JAM f;  4E2W A;  2JNY A;  2VUM I;  3CCR Z;  1K9M 2;  1I6H I;  4BY7 I;  3GTK I;  3KIF A;  1LQL A;  4A3F I;  1ZB9 A;  1USP B;  4NBA A;  2BJO A;  2DE7 A;  2OOX B;  3HOY I;  1KD1 1;  4MON A;  3G4S 1;  3FQM A;  1YHQ 1;  1W2B Z;  2QA4 1;  3PO3 I;  4A3C I;  3CCE 1;  4MRI A;  1K9M 1;  1QF8 A;  5A2Q b;  2DE6 A;  4S1T A;  3I4N I;  4AYB A;  3G4S Z;  2P3Y A;  2JMO A;  3CCU 1;  3J80 b;  2QA4 Z;  1YHQ Z;  1W2B Y;  1VQO 1;  3I4M I;  1M1K 2;  2E2J I;  3U50 C;  3CCE Z;  3S2D I;  3LUS A;  1K73 2;  1VQ8 1;  1KC8 2;  2RPR A;  3VTN A;  2HU9 A;  4RVD A;  3CCU Z;  5C4X I;  1VQO Z;  4DQY B;  1VQ8 Z;  5LL6 f;  1M90 1;  3P5J B;  2R92 I;  1VQM 1;  3BG0 B;  3HOW I;  4A3J I;  2O4H A;  3HOU I;  4E2X A;  2ZAE B;  2LFU A;  4QTT A;  1RO2 A;  3NFZ A;  4NH1 C;  3CC2 1;  1VQM Z;  3CPW Z;  4A3I I;  5IT9 f;  4Y7N I;  1Q7Y 1;  3MZK B;  2JA6 I;  3CC7 1;  2JS4 A;  4X6A I;  3CC2 Z;  5FLM I;  2K3R A;  4RS4 A;  2GU2 A;  2AKL A;  4E31 A;  3CC7 Z;  3GTQ I;  4MD7 A;  3TDH B;  1VQN 1;  2NVY I;  5T67 A;  3S14 I;  2G2K A;  2R6M A;  1VQN Z;  3PO3 S;  4HH4 A;  2E2I I;  3D6W A;  1Q86 1;  1YJ9 1;  1YIJ 1;  1KQS Z;  3PO2 I;  3G6E Z;  1WCM I;  3EER A;  3OW2 Z;  5IP9 I;  4BXX I;  1YJ9 Z;  4MD8 A;  1YIJ Z;  1VQP 1;  1KQS Y;  1KD1 2;  2RHB A;  4RVH A;  1Z02 A;  3IF8 A;  2PK7 A;  3OW2 Y;  2DE5 A;  4DGL A;  4A3G I;  2Y0S A;  4NOZ A;  1TWG I;  1VQP Z;  3M3Y I;  3IX0 A;  3NH4 A;  5FLX f;  3NDI A;  3CCS 1;  3CCM 1;  3S1Q I;  1VQ9 Z;  5AN9 F;  3QWU A;  4A3D I;  4BBS I;  2GTH A;  2LIY A;  4NBH A;  2E9H A;  3J81 b;  1X3Z A;  3CCS Z;  3CCM Z;  3CXC Z;  3K7A I;  2V8I A;  3I07 A;  4QTU A;  3S17 I;  3CD6 1;  1YJN 1;  1M90 2;  1Q81 1;  1JJ2 Z;  4MH4 A;  4NFR A;  3CXC Y;  3VMH A;  2RBL A;  1Z03 A;  1YIT 1;  1YJN Z;  3CD6 Z;  2OOY B;  2W04 A;  2GTI A;  2QEX 1;  2W03 A;  1JJ2 Y;  2I3C A;  4BBR I;  1RO4 A;  1N8R 1;  3S1M I;  1USP A;  1VQ4 1;  2PM9 A;  3F3F C;  1NUI A;  3VMI A;  1VQ7 1;  2QRD B;  1Q7Y 2;  1YIT Z;  1N2F A;  2OZK A;  1QYP A;  2F4M A;  2QEX Z;  1NP6 A;  1ZH1 A;  2J6A A;  3F3P C;  1KRL A;  5D1O A;  3NH5 A;  1VQ4 Z;  2IZ4 A;  3MZL B;  1VQ7 Z;  1RNI A;  3RZO I;  3JAM b;  3GTO I;  2QR1 B;  1Q82 1;  2NVT I;  3GTG I;  3EED A;  1VLA A;  1K83 I;  1I3Q I;  3RZD I;  3GTL I;  4RV9 A;  1Q86 2;  5CM2 M;  1P9N A;  1TFI A;  4TNU A;  5IP7 I;  3CCJ Z;  3KIH A;  2QRC B;  2P28 A;  1SFO I;  5A2Q f;  1QVG Z;  3G6E 1;  2Q51 A;  3J80 f;  2HF1 A;  3GKQ A;  1DL6 A;  2QLV B;  1NJI 2;  2JA7 I;  1QVG Y;  2R93 I;  1YI2 1;  2JUB A;  1ZB8 A;  3GTJ I;  3CME 1;  1JWH C;  4NBE A;  3I55 1;  1Y1W I;  3HOV I;  1VQ9 1;  1PFT A;  4MXU A;  3CCQ 1;  1YI2 Z;  3HKZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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