5C4JI

Crystal structure of a transcribing rna polymerase ii complex reveals a complete transcription bubble
Total Genus 8

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
114
structure length
114
Chain Sequence
TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS1 (15-17)S3 (36-37)S2 (26-28)TVIII1 (47-50)TIV7 (55-58)TIV8 (59-62)TIV13 (103-106)TI1 (61-64)TIV10 (65-68)S4 (70-71)TIV12 (76-79)TI4 (104-107)S6 (99-103)S5 (83-87)TVIII2 (88-91)TI3 (92-95)S7 (108-111)TIV2 (19-22)TIV11 (75-78)TIV1 (8-11)Updating...
connected with : NaN
molecule tags Transferase/dna/rna
publication title Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 8
structure length 114
sequence length 114
ec nomenclature
pdb deposition date 2015-06-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF01096 TFIIS_C Transcription factor S-II (TFIIS)
I PF02150 RNA_POL_M_15KD RNA polymerases M/15 Kd subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c4jI01
2.20.25.10 Mainly Beta Single Sheet N-terminal domain of TfIIb N-terminal domain of TfIIb 5c4jI02
4NOZA 4A3EI 2P3YA 4NB8A 4BBSI 1YUAA 3LUSA 3H0GI 4QTUA 3GTLI 1DL6A 2BJOA 5CM2M 1TWCI 5FLMI 2VUMI 4NBEA 1ML8A 3S1RI 3S14I 1LQLA 3D6WA 3GTOI 2F4OA 2JA5I 2JA8I 3I07A 1NUIA 2R92I 2NVYI 4NBDA 4A3II 3H3VJ 2NVXI 4QTTA 4A3FI 1TWAI 1VLAA 5C4JI 1Y1VI 3EERA 3HOZI 3ESWA 4Y52I 3CQZI 4NBHA 3RZDI 2K5RA 2RBLA 4A3CI 1TWFI 1ZB9A 3M3YI 4X6AI 2R7ZI 1TFIA 1RLYA 5IP7I 3S1QI 4A3LI 2KPIA 2DE7A 3FKII 2JA7I 3PO3I 2JNYA 2JS4A 3U50C 1I6HI 3HOXI 3GTMI 2JA6I 1WCMI 2NVTI 3PO2I 3GKQA 2E2HI 3I4NI 3HOVI 5IP9I 3S16I 1USPA 3S1MI 2B63I 2AKLA 2E2JI 4NBAA 1QYPA 3GCFA 2PK7A 2YU9I 5C4XI 4A3MI 3M4OI 1ZB8A 3S2HI 1I3QI 1X3WA 1TWGI 1L1OC 3Q87A 3RZOI 2R93I 1R9TI 1WW9A 1X3ZA 3GTJI 3S17I 3K7AI 4NBGA 3HOWI 4BBRI 2JR6A 1RO4A 4NBBA 1TWHI 1I50I 3GTKI 1Y1VS 2DE5A 2J6AA 1USPB 2DE6A 3S15I 3GTPI 4A3JI 3GTGI 4A3BI 4BY7I 4NBFA 3VMGA 4NBCA 4Y7NI 4MH4A 4A93I 5C44I 2E2II 2NVQI 3HOYI 1Y1WI 4XX2A 3VB9A 4A3GI 3VMIA 1K83I 2F4MA 3PO3S 1SFOI 1PFTA 2HF1A 1N2FA 3GTMS 4A3DI 3I4MI 3GTQI 3VMHA 3HOUI 3S1NI 4BXXI 5C3EI 3S2DI 4NB9A 4BY1I 4A3KI
chains in the Genus database with same CATH superfamily
4NOZA 3J80f 4NB8A 1KQSY 1VQPZ 1YUAA 1VQ91 3CCUZ 2O53A 2YADA 4QTUA 3MZKB 3CPWZ 3FQQA 2BJOA 5FLMI 1ML8A 3G711 1K9M2 4TNUA 2JA8I 5T6BA 4MD9A 3CXCZ 1NUIA 3CCRZ 1YUKA 1QVFZ 2NVYI 4NBDA 3H3VJ 5IT9b 5C4JI 1VQ6Z 1Y1VI 3EERA 4E2YA 1JWHC 4Y52I 2V8KA 4X6AI 2R7ZI 1Y8CA 3NH8A 2QEXZ 1TFIA 3CC21 3S1QI 2AYDA 4CL1A 2QA4Z 3NH4A 2QREB 2E7ZA 3PO3I 3CCM1 2W03A 1WCMI 4MD7A 3PO2I 3CCJZ 3JAMb 4MXUA 3F3PC 4NBAA 3NH5A 2RPRA 3S2HI 1I3QI 3I56Z 1YHQZ 1YJWZ 1WW9A 2PM9A 1X3ZA 1ZH1A 1YJ91 2JUBA 3GTJI 3G6EZ 1K732 1Q7Y2 2O4HA 2P28A 4BBRI 2J6AA 1Q811 1Q822 2RT9A 4BY7I 3CMEZ 3CCQZ 4NBCA 2RIQA 3HOYI 2ZAEB 4E32A 3CCL1 1Y1WI 1QVFY 1VQLZ 1NJI1 1SFOI 1KC81 2QLVB 3VMHA 2OTJ1 2PMZA 2RHBA 1Z01A 1S721 4BXXI 5C3EI 2LEXA 1K8A1 2H85A 4DGLA 4BBSI 4E33A 1VQ4Z 3GTLI 3OW2Y 4E2ZA 5CM2M 3S14I 3G4SZ 3KIFA 1LQLA 1RO0A 1AA6A 1M1K2 3I07A 1NP6A 2QRCB 3F3FC 4RVFA 4QTTA 3CC41 4DQYB 2VUGA 1VLAA 4RS4A 1S7MA 3I551 4E2WA 2OZKA 3TDHB 4EWCA 3RZDI 1VQOZ 1M902 3CD6Z 2IZ3A 1VQN1 1RLYA 1YI21 2KPIA 2JA7I 2GTIA 2JNYA 2JS4A 5D1OA 3T4NB 1YITZ 1I6HI 2KI7B 3IF8A 3GKQA 2E2HI 1VQ81 5IP9I 3S16I 3MZLB 1VQKZ 5LL6f 1YIJ1 1VQ9Z 1QF8A 3MONA 1X3WA 3CC71 2OOXB 2NAPA 1VQNZ 1R9TI 3G71Z 3CCE1 2OTL1 1P9NA 3OW2Z 1RO2A 1WZNA 4RV9A 4HH4A 5FLXf 1RQFA 1K9M1 3GTGI 2W04A 4A93I 2JIRA 2NVQI 2IV2X 3J81f 1PFTA 2VF1A 3CC2Z 3GTMS 4A3DI 2EGTA 2VPZA 3CCMZ 4NB9A 4BY1I 3S1MI 3IFUA 4HGZA 2R6MA 4A3EI 2P3YA 2WB1A 1YJN1 2JIMA 2HU9A 4AYBA 3LUSA 2GTHA 5T64A 3H0GI 3CCS1 4RVHA 1K8A2 1DL6A 2VUMI 2V8IA 1KD12 2I3CA 3CCV1 4NH1C 1VQ71 3CMA1 1YJ9Z 2G2KA 3GTOI 2V45A 3IR7A 2JA5I 2R92I 2JIPA 4A3II 1QXFA 1Q862 1JJ2Y 3NFZA 1VQM1 3HOZI 1K731 1Q7Y1 3ESWA 3CQZI 2K3RA 4NBHA 5FLXb 2K5RA 2RBLA 5AN9F 4A3CI 1TWFI 3CCLZ 2JIQA 4MD8A 1Q821 5IP7I 4E30A 1VQ51 4A3LI 2DE7A 1KRLA 2QR1B 3BG1B 2JA6I 4RVGA 2OTJZ 2OOYB 2NVTI 1S72Z 3J81b 1USPA 4E31A 1VQP1 2QRDB 2B63I 3CCU1 2E2JI 1Z02A 3M4OI 1QVGZ 1TWGI 2R93I 1VQ5Z 2M48A 3CCR1 4NBGA 3HOWI 4NBBA 1W2BZ 3GTKI 1Y1VS 1Z03A 1VQ61 3S15I 3GTPI 3CC4Z 4A3BI 2WAQA 3D2LA 4Y7NI 4MH4A 3I55Z 5C44I 1N8R1 2E2II 1M1K1 3J7A4 3HKZA 3QWUA 2QEX1 4DK1A 5T67A 2QA41 3IX0A 3VMIA 1K83I 4A3GI 1JJ2Z 3PO3S 2HF1A 2M6NA 1X0TA 1YI2Z 1RNIA 1SIWA 3I4MI 3GTQI 2JIOA 3HOUI 3CCJ1 2Q51A 1M901 4A3KI 1VQ8Z 5A2Qb 2V3VA 1YIJZ 2LFUA 3I561 1YHQ1 1YJW1 1TWCI 4NFRA 4NBEA 3CC7Z 3S1RI 5D1PA 1Q812 3D6WA 3G6E1 3CCEZ 2F4OA 2OTLZ 1QVGY 3BG0B 2NVXI 2VPYA 3CME1 1FDOA 3CCQ1 4A3FI 1TWAI 2VPWA 2VPXA 1NJI2 1KC82 3P5JB 3J80b 1ZB9A 3M3YI 1VQL1 1W2BY 1KQSZ 3NDIA 4E2XA 2LIYA 3FKII 3KIHA 2Q4ZA 2QKDA 2V8JA 3U50C 3HOXI 4HGYA 3CPWY 3GTMI 3I4NI 3FQMA 3HOVI 2AKLA 3D9XA 1VQ41 3NDJA 1QYPA 3GCFA 2PK7A 1YJNZ 2YU9I 5C4XI 4RVDA 4A3MI 1ZB8A 3CXCY 3CCSZ 3TE5B 2Y0SA 1L1OC 3G4S1 3Q87A 4S1TA 3RZOI 1Q16A 5IT9f 2E9HA 3S17I 1WIIA 3K7AI 3CCVZ 1VQ7Z 5A2Qf 3CMAZ 3EEDA 1RO4A 2JR6A 1TWHI 1I50I 2DE5A 2IZ4A 1USPB 2DE6A 1KD11 1WJ2A 2GU2A 4A3JI 3VTNA 4NBFA 3VMGA 1VQO1 3CD61 1VQMZ 4MONA 4XX2A 3VB9A 1Q861 2JMOA 2F4MA 1FDIA 3JAMf 1N2FA 1YIT1 1N8R2 4MRIA 5D1OB 3S1NI 3S2DI 1VQK1
chains in the Genus database with same CATH topology
4NOZA 3J80f 4NB8A 1KQSY 1VQPZ 1YUAA 1VQ91 3CCUZ 2O53A 2YADA 4QTUA 3MZKB 3CPWZ 3FQQA 2BJOA 5FLMI 1ML8A 3G711 1K9M2 4TNUA 2JA8I 5T6BA 4MD9A 3CXCZ 1NUIA 3CCRZ 1YUKA 1QVFZ 2NVYI 4NBDA 3H3VJ 5IT9b 5C4JI 1VQ6Z 1Y1VI 3EERA 4E2YA 1JWHC 4Y52I 2V8KA 4X6AI 2R7ZI 3NH8A 2QEXZ 1TFIA 3CC21 3S1QI 4CL1A 2QA4Z 3NH4A 2QREB 3PO3I 3CCM1 2W03A 1WCMI 4MD7A 3PO2I 3CCJZ 3JAMb 4MXUA 3F3PC 4NBAA 3NH5A 2RPRA 3S2HI 1I3QI 3I56Z 1YHQZ 1YJWZ 1WW9A 2PM9A 1X3ZA 1ZH1A 1YJ91 2JUBA 3GTJI 3G6EZ 1K732 1Q7Y2 2O4HA 2P28A 4BBRI 2J6AA 1Q811 1Q822 2RT9A 4BY7I 3CMEZ 3CCQZ 4NBCA 2RIQA 3HOYI 2ZAEB 4E32A 3CCL1 1Y1WI 1QVFY 1VQLZ 1NJI1 1SFOI 1KC81 2QLVB 3VMHA 2OTJ1 2PMZA 2RHBA 1Z01A 1S721 4BXXI 5C3EI 1K8A1 2H85A 4DGLA 4BBSI 4E33A 1VQ4Z 3GTLI 3OW2Y 4E2ZA 5CM2M 3S14I 3G4SZ 3KIFA 1LQLA 1RO0A 1M1K2 3I07A 1NP6A 2QRCB 3F3FC 4RVFA 4QTTA 3CC41 4DQYB 2VUGA 1VLAA 4RS4A 1S7MA 3I551 4E2WA 2OZKA 3TDHB 4EWCA 3RZDI 1VQOZ 1M902 3CD6Z 2IZ3A 1VQN1 1RLYA 1YI21 2KPIA 2JA7I 2GTIA 2JNYA 2JS4A 5D1OA 3T4NB 1YITZ 1I6HI 2KI7B 3IF8A 3GKQA 2E2HI 1VQ81 5IP9I 3S16I 3MZLB 1VQKZ 5LL6f 1YIJ1 1VQ9Z 1QF8A 3MONA 1X3WA 3CC71 2OOXB 1VQNZ 1R9TI 3G71Z 3CCE1 2OTL1 1P9NA 3OW2Z 1RO2A 4RV9A 4HH4A 5FLXf 1RQFA 1K9M1 3GTGI 2W04A 4A93I 2NVQI 3J81f 1PFTA 2VF1A 3CC2Z 3GTMS 4A3DI 2EGTA 3CCMZ 4NB9A 4BY1I 3S1MI 3IFUA 4HGZA 2R6MA 4A3EI 2P3YA 2WB1A 1YJN1 2HU9A 4AYBA 3LUSA 2GTHA 5T64A 3H0GI 3CCS1 4RVHA 1K8A2 1DL6A 2VUMI 2V8IA 1KD12 2I3CA 3CCV1 4NH1C 1VQ71 3CMA1 1YJ9Z 2G2KA 3GTOI 2JA5I 2R92I 4A3II 1Q862 1JJ2Y 3NFZA 1VQM1 3HOZI 1K731 1Q7Y1 3ESWA 3CQZI 2K3RA 4NBHA 5FLXb 2K5RA 2RBLA 5AN9F 4A3CI 1TWFI 3CCLZ 4MD8A 1Q821 5IP7I 4E30A 1VQ51 4A3LI 2DE7A 1KRLA 2QR1B 3BG1B 2JA6I 4RVGA 2OTJZ 2OOYB 2NVTI 1S72Z 1VQP1 3J81b 1USPA 4E31A 2QRDB 2B63I 3CCU1 2E2JI 1Z02A 3M4OI 1QVGZ 1TWGI 2R93I 1VQ5Z 2M48A 3CCR1 4NBGA 3HOWI 4NBBA 1W2BZ 3GTKI 1Y1VS 1Z03A 1VQ61 3S15I 3GTPI 3CC4Z 4A3BI 2WAQA 4Y7NI 4MH4A 3I55Z 5C44I 1N8R1 2E2II 1M1K1 3J7A4 3HKZA 3QWUA 2QEX1 4DK1A 5T67A 2QA41 3IX0A 3VMIA 1K83I 4A3GI 1JJ2Z 3PO3S 2HF1A 2M6NA 1X0TA 1YI2Z 1RNIA 3I4MI 3GTQI 3HOUI 3CCJ1 2Q51A 1M901 4A3KI 1VQ8Z 5A2Qb 1YIJZ 2LFUA 3I561 1YHQ1 1YJW1 1TWCI 4NFRA 4NBEA 3CC7Z 3S1RI 5D1PA 1Q812 3D6WA 3G6E1 3CCEZ 2F4OA 2OTLZ 1QVGY 3BG0B 2NVXI 3CME1 3CCQ1 4A3FI 1TWAI 1NJI2 1KC82 3P5JB 3J80b 1ZB9A 3M3YI 1VQL1 1W2BY 1KQSZ 3NDIA 4E2XA 2LIYA 3FKII 3KIHA 2Q4ZA 2QKDA 2V8JA 3U50C 3HOXI 4HGYA 3CPWY 3GTMI 3I4NI 3FQMA 3HOVI 2AKLA 3D9XA 1VQ41 3NDJA 1QYPA 3GCFA 2PK7A 1YJNZ 2YU9I 5C4XI 4RVDA 4A3MI 1ZB8A 3CXCY 3CCSZ 3TE5B 2Y0SA 1L1OC 3G4S1 3Q87A 4S1TA 3RZOI 5IT9f 2E9HA 3S17I 1WIIA 3K7AI 3CCVZ 1VQ7Z 5A2Qf 3CMAZ 3EEDA 2JR6A 1RO4A 1TWHI 1I50I 2DE5A 2IZ4A 1USPB 2DE6A 1KD11 2GU2A 4A3JI 3VTNA 4NBFA 3VMGA 1VQO1 3CD61 1VQMZ 4MONA 4XX2A 3VB9A 1Q861 2JMOA 2F4MA 3JAMf 1N2FA 1YIT1 1N8R2 4MRIA 5D1OB 3S1NI 3S2DI 1VQK1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NOZ A;  4A3E I;  2P3Y A;  4NB8 A;  4BBS I;  1YUA A;  3LUS A;  3H0G I;  4QTU A;  3GTL I;  1DL6 A;  2BJO A;  5CM2 M;  1TWC I;  5FLM I;  2VUM I;  4NBE A;  1ML8 A;  3S1R I;  3S14 I;  1LQL A;  3D6W A;  3GTO I;  2F4O A;  2JA5 I;  2JA8 I;  3I07 A;  1NUI A;  2R92 I;  2NVY I;  4NBD A;  4A3I I;  3H3V J;  2NVX I;  4QTT A;  4A3F I;  1TWA I;  1VLA A;  5C4J I;  1Y1V I;  3EER A;  3HOZ I;  3ESW A;  4Y52 I;  3CQZ I;  4NBH A;  3RZD I;  2K5R A;  2RBL A;  4A3C I;  1TWF I;  1ZB9 A;  3M3Y I;  4X6A I;  2R7Z I;  1TFI A;  1RLY A;  5IP7 I;  3S1Q I;  4A3L I;  2KPI A;  2DE7 A;  3FKI I;  2JA7 I;  3PO3 I;  2JNY A;  2JS4 A;  3U50 C;  1I6H I;  3HOX I;  3GTM I;  2JA6 I;  1WCM I;  2NVT I;  3PO2 I;  3GKQ A;  2E2H I;  3I4N I;  3HOV I;  5IP9 I;  3S16 I;  1USP A;  3S1M I;  2B63 I;  2AKL A;  2E2J I;  4NBA A;  1QYP A;  3GCF A;  2PK7 A;  2YU9 I;  5C4X I;  4A3M I;  3M4O I;  1ZB8 A;  3S2H I;  1I3Q I;  1X3W A;  1TWG I;  1L1O C;  3Q87 A;  3RZO I;  2R93 I;  1R9T I;  1WW9 A;  1X3Z A;  3GTJ I;  3S17 I;  3K7A I;  4NBG A;  3HOW I;  4BBR I;  2JR6 A;  1RO4 A;  4NBB A;  1TWH I;  1I50 I;  3GTK I;  1Y1V S;  2DE5 A;  2J6A A;  1USP B;  2DE6 A;  3S15 I;  3GTP I;  4A3J I;  3GTG I;  4A3B I;  4BY7 I;  4NBF A;  3VMG A;  4NBC A;  4Y7N I;  4MH4 A;  4A93 I;  5C44 I;  2E2I I;  2NVQ I;  3HOY I;  1Y1W I;  4XX2 A;  3VB9 A;  4A3G I;  3VMI A;  1K83 I;  2F4M A;  3PO3 S;  1SFO I;  1PFT A;  2HF1 A;  1N2F A;  3GTM S;  4A3D I;  3I4M I;  3GTQ I;  3VMH A;  3HOU I;  3S1N I;  4BXX I;  5C3E I;  3S2D I;  4NB9 A;  4BY1 I;  4A3K I; 
#chains in the Genus database with same CATH topology
 4NOZ A;  3J80 f;  4NB8 A;  1KQS Y;  1VQP Z;  1YUA A;  1VQ9 1;  3CCU Z;  2O53 A;  2YAD A;  4QTU A;  3MZK B;  3CPW Z;  3FQQ A;  2BJO A;  5FLM I;  1ML8 A;  3G71 1;  1K9M 2;  4TNU A;  2JA8 I;  5T6B A;  4MD9 A;  3CXC Z;  1NUI A;  3CCR Z;  1YUK A;  1QVF Z;  2NVY I;  4NBD A;  3H3V J;  5IT9 b;  5C4J I;  1VQ6 Z;  1Y1V I;  3EER A;  4E2Y A;  1JWH C;  4Y52 I;  2V8K A;  4X6A I;  2R7Z I;  1Y8C A;  3NH8 A;  2QEX Z;  1TFI A;  3CC2 1;  3S1Q I;  2AYD A;  4CL1 A;  2QA4 Z;  3NH4 A;  2QRE B;  2E7Z A;  3PO3 I;  3CCM 1;  2W03 A;  1WCM I;  4MD7 A;  3PO2 I;  3CCJ Z;  3JAM b;  4MXU A;  3F3P C;  4NBA A;  3NH5 A;  2RPR A;  3S2H I;  1I3Q I;  3I56 Z;  1YHQ Z;  1YJW Z;  1WW9 A;  2PM9 A;  1X3Z A;  1ZH1 A;  1YJ9 1;  2JUB A;  3GTJ I;  3G6E Z;  1K73 2;  1Q7Y 2;  2O4H A;  2P28 A;  4BBR I;  2J6A A;  1Q81 1;  1Q82 2;  2RT9 A;  4BY7 I;  3CME Z;  3CCQ Z;  4NBC A;  2RIQ A;  3HOY I;  2ZAE B;  4E32 A;  3CCL 1;  1Y1W I;  1QVF Y;  1VQL Z;  1NJI 1;  1SFO I;  1KC8 1;  2QLV B;  3VMH A;  2OTJ 1;  2PMZ A;  2RHB A;  1Z01 A;  1S72 1;  4BXX I;  5C3E I;  2LEX A;  1K8A 1;  2H85 A;  4DGL A;  4BBS I;  4E33 A;  1VQ4 Z;  3GTL I;  3OW2 Y;  4E2Z A;  5CM2 M;  3S14 I;  3G4S Z;  3KIF A;  1LQL A;  1RO0 A;  1AA6 A;  1M1K 2;  3I07 A;  1NP6 A;  2QRC B;  3F3F C;  4RVF A;  4QTT A;  3CC4 1;  4DQY B;  2VUG A;  1VLA A;  4RS4 A;  1S7M A;  3I55 1;  4E2W A;  2OZK A;  3TDH B;  4EWC A;  3RZD I;  1VQO Z;  1M90 2;  3CD6 Z;  2IZ3 A;  1VQN 1;  1RLY A;  1YI2 1;  2KPI A;  2JA7 I;  2GTI A;  2JNY A;  2JS4 A;  5D1O A;  3T4N B;  1YIT Z;  1I6H I;  2KI7 B;  3IF8 A;  3GKQ A;  2E2H I;  1VQ8 1;  5IP9 I;  3S16 I;  3MZL B;  1VQK Z;  5LL6 f;  1YIJ 1;  1VQ9 Z;  1QF8 A;  3MON A;  1X3W A;  3CC7 1;  2OOX B;  2NAP A;  1VQN Z;  1R9T I;  3G71 Z;  3CCE 1;  2OTL 1;  1P9N A;  3OW2 Z;  1RO2 A;  1WZN A;  4RV9 A;  4HH4 A;  5FLX f;  1RQF A;  1K9M 1;  3GTG I;  2W04 A;  4A93 I;  2JIR A;  2NVQ I;  2IV2 X;  3J81 f;  1PFT A;  2VF1 A;  3CC2 Z;  3GTM S;  4A3D I;  2EGT A;  2VPZ A;  3CCM Z;  4NB9 A;  4BY1 I;  3S1M I;  3IFU A;  4HGZ A;  2R6M A;  4A3E I;  2P3Y A;  2WB1 A;  1YJN 1;  2JIM A;  2HU9 A;  4AYB A;  3LUS A;  2GTH A;  5T64 A;  3H0G I;  3CCS 1;  4RVH A;  1K8A 2;  1DL6 A;  2VUM I;  2V8I A;  1KD1 2;  2I3C A;  3CCV 1;  4NH1 C;  1VQ7 1;  3CMA 1;  1YJ9 Z;  2G2K A;  3GTO I;  2V45 A;  3IR7 A;  2JA5 I;  2R92 I;  2JIP A;  4A3I I;  1QXF A;  1Q86 2;  1JJ2 Y;  3NFZ A;  1VQM 1;  3HOZ I;  1K73 1;  1Q7Y 1;  3ESW A;  3CQZ I;  2K3R A;  4NBH A;  5FLX b;  2K5R A;  2RBL A;  5AN9 F;  4A3C I;  1TWF I;  3CCL Z;  2JIQ A;  4MD8 A;  1Q82 1;  5IP7 I;  4E30 A;  1VQ5 1;  4A3L I;  2DE7 A;  1KRL A;  2QR1 B;  3BG1 B;  2JA6 I;  4RVG A;  2OTJ Z;  2OOY B;  2NVT I;  1S72 Z;  3J81 b;  1USP A;  4E31 A;  1VQP 1;  2QRD B;  2B63 I;  3CCU 1;  2E2J I;  1Z02 A;  3M4O I;  1QVG Z;  1TWG I;  2R93 I;  1VQ5 Z;  2M48 A;  3CCR 1;  4NBG A;  3HOW I;  4NBB A;  1W2B Z;  3GTK I;  1Y1V S;  1Z03 A;  1VQ6 1;  3S15 I;  3GTP I;  3CC4 Z;  4A3B I;  2WAQ A;  3D2L A;  4Y7N I;  4MH4 A;  3I55 Z;  5C44 I;  1N8R 1;  2E2I I;  1M1K 1;  3J7A 4;  3HKZ A;  3QWU A;  2QEX 1;  4DK1 A;  5T67 A;  2QA4 1;  3IX0 A;  3VMI A;  1K83 I;  4A3G I;  1JJ2 Z;  3PO3 S;  2HF1 A;  2M6N A;  1X0T A;  1YI2 Z;  1RNI A;  1SIW A;  3I4M I;  3GTQ I;  2JIO A;  3HOU I;  3CCJ 1;  2Q51 A;  1M90 1;  4A3K I;  1VQ8 Z;  5A2Q b;  2V3V A;  1YIJ Z;  2LFU A;  3I56 1;  1YHQ 1;  1YJW 1;  1TWC I;  4NFR A;  4NBE A;  3CC7 Z;  3S1R I;  5D1P A;  1Q81 2;  3D6W A;  3G6E 1;  3CCE Z;  2F4O A;  2OTL Z;  1QVG Y;  3BG0 B;  2NVX I;  2VPY A;  3CME 1;  1FDO A;  3CCQ 1;  4A3F I;  1TWA I;  2VPW A;  2VPX A;  1NJI 2;  1KC8 2;  3P5J B;  3J80 b;  1ZB9 A;  3M3Y I;  1VQL 1;  1W2B Y;  1KQS Z;  3NDI A;  4E2X A;  2LIY A;  3FKI I;  3KIH A;  2Q4Z A;  2QKD A;  2V8J A;  3U50 C;  3HOX I;  4HGY A;  3CPW Y;  3GTM I;  3I4N I;  3FQM A;  3HOV I;  2AKL A;  3D9X A;  1VQ4 1;  3NDJ A;  1QYP A;  3GCF A;  2PK7 A;  1YJN Z;  2YU9 I;  5C4X I;  4RVD A;  4A3M I;  1ZB8 A;  3CXC Y;  3CCS Z;  3TE5 B;  2Y0S A;  1L1O C;  3G4S 1;  3Q87 A;  4S1T A;  3RZO I;  1Q16 A;  5IT9 f;  2E9H A;  3S17 I;  1WII A;  3K7A I;  3CCV Z;  1VQ7 Z;  5A2Q f;  3CMA Z;  3EED A;  1RO4 A;  2JR6 A;  1TWH I;  1I50 I;  2DE5 A;  2IZ4 A;  1USP B;  2DE6 A;  1KD1 1;  1WJ2 A;  2GU2 A;  4A3J I;  3VTN A;  4NBF A;  3VMG A;  1VQO 1;  3CD6 1;  1VQM Z;  4MON A;  4XX2 A;  3VB9 A;  1Q86 1;  2JMO A;  2F4M A;  1FDI A;  3JAM f;  1N2F A;  1YIT 1;  1N8R 2;  4MRI A;  5D1O B;  3S1N I;  3S2D I;  1VQK 1; 
#chains in the Genus database with same CATH homology
 4NOZ A;  3J80 f;  4NB8 A;  1KQS Y;  1VQP Z;  1YUA A;  1VQ9 1;  3CCU Z;  2O53 A;  2YAD A;  4QTU A;  3MZK B;  3CPW Z;  3FQQ A;  2BJO A;  5FLM I;  1ML8 A;  3G71 1;  1K9M 2;  4TNU A;  2JA8 I;  5T6B A;  4MD9 A;  3CXC Z;  1NUI A;  3CCR Z;  1YUK A;  1QVF Z;  2NVY I;  4NBD A;  3H3V J;  5IT9 b;  5C4J I;  1VQ6 Z;  1Y1V I;  3EER A;  4E2Y A;  1JWH C;  4Y52 I;  2V8K A;  4X6A I;  2R7Z I;  3NH8 A;  2QEX Z;  1TFI A;  3CC2 1;  3S1Q I;  4CL1 A;  2QA4 Z;  3NH4 A;  2QRE B;  3PO3 I;  3CCM 1;  2W03 A;  1WCM I;  4MD7 A;  3PO2 I;  3CCJ Z;  3JAM b;  4MXU A;  3F3P C;  4NBA A;  3NH5 A;  2RPR A;  3S2H I;  1I3Q I;  3I56 Z;  1YHQ Z;  1YJW Z;  1WW9 A;  2PM9 A;  1X3Z A;  1ZH1 A;  1YJ9 1;  2JUB A;  3GTJ I;  3G6E Z;  1K73 2;  1Q7Y 2;  2O4H A;  2P28 A;  4BBR I;  2J6A A;  1Q81 1;  1Q82 2;  2RT9 A;  4BY7 I;  3CME Z;  3CCQ Z;  4NBC A;  2RIQ A;  3HOY I;  2ZAE B;  4E32 A;  3CCL 1;  1Y1W I;  1QVF Y;  1VQL Z;  1NJI 1;  1SFO I;  1KC8 1;  2QLV B;  3VMH A;  2OTJ 1;  2PMZ A;  2RHB A;  1Z01 A;  1S72 1;  4BXX I;  5C3E I;  1K8A 1;  2H85 A;  4DGL A;  4BBS I;  4E33 A;  1VQ4 Z;  3GTL I;  3OW2 Y;  4E2Z A;  5CM2 M;  3S14 I;  3G4S Z;  3KIF A;  1LQL A;  1RO0 A;  1M1K 2;  3I07 A;  1NP6 A;  2QRC B;  3F3F C;  4RVF A;  4QTT A;  3CC4 1;  4DQY B;  2VUG A;  1VLA A;  4RS4 A;  1S7M A;  3I55 1;  4E2W A;  2OZK A;  3TDH B;  4EWC A;  3RZD I;  1VQO Z;  1M90 2;  3CD6 Z;  2IZ3 A;  1VQN 1;  1RLY A;  1YI2 1;  2KPI A;  2JA7 I;  2GTI A;  2JNY A;  2JS4 A;  5D1O A;  3T4N B;  1YIT Z;  1I6H I;  2KI7 B;  3IF8 A;  3GKQ A;  2E2H I;  1VQ8 1;  5IP9 I;  3S16 I;  3MZL B;  1VQK Z;  5LL6 f;  1YIJ 1;  1VQ9 Z;  1QF8 A;  3MON A;  1X3W A;  3CC7 1;  2OOX B;  1VQN Z;  1R9T I;  3G71 Z;  3CCE 1;  2OTL 1;  1P9N A;  3OW2 Z;  1RO2 A;  4RV9 A;  4HH4 A;  5FLX f;  1RQF A;  1K9M 1;  3GTG I;  2W04 A;  4A93 I;  2NVQ I;  3J81 f;  1PFT A;  2VF1 A;  3CC2 Z;  3GTM S;  4A3D I;  2EGT A;  3CCM Z;  4NB9 A;  4BY1 I;  3S1M I;  3IFU A;  4HGZ A;  2R6M A;  4A3E I;  2P3Y A;  2WB1 A;  1YJN 1;  2HU9 A;  4AYB A;  3LUS A;  2GTH A;  5T64 A;  3H0G I;  3CCS 1;  4RVH A;  1K8A 2;  1DL6 A;  2VUM I;  2V8I A;  1KD1 2;  2I3C A;  3CCV 1;  4NH1 C;  1VQ7 1;  3CMA 1;  1YJ9 Z;  2G2K A;  3GTO I;  2JA5 I;  2R92 I;  4A3I I;  1Q86 2;  1JJ2 Y;  3NFZ A;  1VQM 1;  3HOZ I;  1K73 1;  1Q7Y 1;  3ESW A;  3CQZ I;  2K3R A;  4NBH A;  5FLX b;  2K5R A;  2RBL A;  5AN9 F;  4A3C I;  1TWF I;  3CCL Z;  4MD8 A;  1Q82 1;  5IP7 I;  4E30 A;  1VQ5 1;  4A3L I;  2DE7 A;  1KRL A;  2QR1 B;  3BG1 B;  2JA6 I;  4RVG A;  2OTJ Z;  2OOY B;  2NVT I;  1S72 Z;  1VQP 1;  3J81 b;  1USP A;  4E31 A;  2QRD B;  2B63 I;  3CCU 1;  2E2J I;  1Z02 A;  3M4O I;  1QVG Z;  1TWG I;  2R93 I;  1VQ5 Z;  2M48 A;  3CCR 1;  4NBG A;  3HOW I;  4NBB A;  1W2B Z;  3GTK I;  1Y1V S;  1Z03 A;  1VQ6 1;  3S15 I;  3GTP I;  3CC4 Z;  4A3B I;  2WAQ A;  4Y7N I;  4MH4 A;  3I55 Z;  5C44 I;  1N8R 1;  2E2I I;  1M1K 1;  3J7A 4;  3HKZ A;  3QWU A;  2QEX 1;  4DK1 A;  5T67 A;  2QA4 1;  3IX0 A;  3VMI A;  1K83 I;  4A3G I;  1JJ2 Z;  3PO3 S;  2HF1 A;  2M6N A;  1X0T A;  1YI2 Z;  1RNI A;  3I4M I;  3GTQ I;  3HOU I;  3CCJ 1;  2Q51 A;  1M90 1;  4A3K I;  1VQ8 Z;  5A2Q b;  1YIJ Z;  2LFU A;  3I56 1;  1YHQ 1;  1YJW 1;  1TWC I;  4NFR A;  4NBE A;  3CC7 Z;  3S1R I;  5D1P A;  1Q81 2;  3D6W A;  3G6E 1;  3CCE Z;  2F4O A;  2OTL Z;  1QVG Y;  3BG0 B;  2NVX I;  3CME 1;  3CCQ 1;  4A3F I;  1TWA I;  1NJI 2;  1KC8 2;  3P5J B;  3J80 b;  1ZB9 A;  3M3Y I;  1VQL 1;  1W2B Y;  1KQS Z;  3NDI A;  4E2X A;  2LIY A;  3FKI I;  3KIH A;  2Q4Z A;  2QKD A;  2V8J A;  3U50 C;  3HOX I;  4HGY A;  3CPW Y;  3GTM I;  3I4N I;  3FQM A;  3HOV I;  2AKL A;  3D9X A;  1VQ4 1;  3NDJ A;  1QYP A;  3GCF A;  2PK7 A;  1YJN Z;  2YU9 I;  5C4X I;  4RVD A;  4A3M I;  1ZB8 A;  3CXC Y;  3CCS Z;  3TE5 B;  2Y0S A;  1L1O C;  3G4S 1;  3Q87 A;  4S1T A;  3RZO I;  5IT9 f;  2E9H A;  3S17 I;  1WII A;  3K7A I;  3CCV Z;  1VQ7 Z;  5A2Q f;  3CMA Z;  3EED A;  2JR6 A;  1RO4 A;  1TWH I;  1I50 I;  2DE5 A;  2IZ4 A;  1USP B;  2DE6 A;  1KD1 1;  2GU2 A;  4A3J I;  3VTN A;  4NBF A;  3VMG A;  1VQO 1;  3CD6 1;  1VQM Z;  4MON A;  4XX2 A;  3VB9 A;  1Q86 1;  2JMO A;  2F4M A;  3JAM f;  1N2F A;  1YIT 1;  1N8R 2;  4MRI A;  5D1O B;  3S1N I;  3S2D I;  1VQK 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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