5C4X | Genus

Total Genus 10

Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	10
sequence length	114
structure length	114
Chain Sequence	TTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGSPLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK

Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__9040141904582608__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__9040141904582608__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/5C4X/I/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__9040141904582608__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"9040141904582608","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/5C4X/I/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__9040141904582608__ ready

script 1 started

platformSpeed = 8

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase/rna/dna
source organism	Saccharomyces cerevisiae (strain atcc 204508 / s288c)
publication title	Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	10
structure length	114
sequence length	114
ec nomenclature
pdb deposition date	2015-06-18

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
I	PF01096	TFIIS_C	Transcription factor S-II (TFIIS)
I	PF02150	RNA_POL_M_15KD	RNA polymerases M/15 Kd subunit

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	5c4xI01
2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb	N-terminal domain of TfIIb	5c4xI02

2R7ZI 3RZOI 3M4OI 4BBRI 1VLAA 1RLYA 3VMIA 1L1OC 2JS4A 1TWHI 1I50I 2JNYA 1N2FA 3ESWA 3S1RI 1TWCI 1Y1VS 4NBFA 1R9TI 1TWGI 2F4OA 5CM2M 2E2HI 3S2DI 5C44I 4MH4A 4BY1I 4BBSI 3HOYI 3GTPI 4NBAA 1WW9A 4A3II 2J6AA 3M3YI 4A3MI 3GTLI 3GTMS 4A3DI 1TWFI 2B63I 2DE5A 2PK7A 2NVXI 2P3YA 4NOZA 4NBCA 3PO3S 3VB9A 3FKII 2JA6I 4A3BI 3GTKI 4QTTA 4QTUA 1WCMI 1SFOI 3RZDI 3PO2I 3HOZI 2NVQI 1QYPA 2F4MA 3D6WA 3Q87A 4NBEA 3GCFA 1Y1WI 3GTOI 3I4MI 2JA7I 2R93I 1USPB 3GTQI 3I4NI 3U50C 2K5RA 1TFIA 4XX2A 1YUAA 3VMHA 3HOWI 2JR6A 4A3KI 3CQZI 2AKLA 1I6HI 3S14I 1X3WA 3GKQA 5C4XI 3HOXI 3I07A 2JA8I 4A93I 1USPA 2HF1A 2RBLA 3S1MI 3K7AI 1K83I 5FLMI 1NUIA 2JA5I 1ZB8A 2R92I 4Y7NI 4NBBA 3S1NI 5C4JI 4A3JI 2E2II 1LQLA 4NB9A 2NVTI 3S16I 4A3LI 3S1QI 2YU9I 3HOVI 4NBGA 3GTGI 5IP7I 1I3QI 4NBDA 1PFTA 2KPIA 5IP9I 3H0GI 3GTJI 1Y1VI 3H3VJ 4A3GI 1RO4A 2NVYI 2BJOA 3S15I 5C3EI 3LUSA 4BY7I 3S2HI 2E2JI 4A3FI 1ML8A 4BXXI 4Y52I 1TWAI 1ZB9A 3S17I 3GTMI 4NB8A 4A3EI 2DE6A 4X6AI 3PO3I 3EERA 3HOUI 4A3CI 2VUMI 3VMGA 4NBHA 1DL6A 1X3ZA 2DE7A
chains in the Genus database with same CATH superfamily

4RVHA 3RZOI 4E33A 3M4OI 2V8JA 1L1OC 3CCJ1 2JIPA 1Y8CA 1NJI2 1I50I 3JAMb 1TWCI 4NBFA 1TWGI 1VQ91 3S2DI 4MH4A 1X0TA 3J81b 4TNUA 3BG0B 1Z03A 2QRCB 2OZKA 3MONA 1WZNA 3GTPI 4NBAA 2QR1B 3CPWZ 1QVGZ 4E2XA 3CCJZ 1KC81 2V45A 2VPXA 1VQK1 3EEDA 2PM9A 3VB9A 3CPWY 1ZH1A 1QVGY 2QA41 3G71Z 1Q861 5FLXf 3HOZI 3GTOI 3Q87A 3I4MI 1K9M2 1YIT1 4RV9A 4E32A 4NFRA 3I4NI 1YHQ1 3NDIA 4XX2A 3HOWI 1RQFA 2LIYA 2JR6A 2QA4Z 2AKLA 1X3WA 3GKQA 1M1K2 5C4XI 3I551 1K9M1 1VQL1 2JA8I 4EWCA 3S1MI 3K7AI 1YHQZ 4RS4A 4Y7NI 3S1NI 1QXFA 4NB9A 1M902 4A3LI 5D1OB 4NBGA 1RO0A 4NBDA 3P5JB 3I55Z 1VQLZ 3VTNA 3CCE1 2NVYI 1KQSZ 5C3EI 2GTHA 2VF1A 1YJWZ 2QEX1 1VQ7Z 4A3FI 3CD61 1ML8A 3CCS1 5LL6f 1FDIA 5FLXb 2OTJZ 1Z02A 3JAMf 3CCEZ 3BG1B 2EGTA 3D9XA 1VQ5Z 2LFUA 1VQ6Z 1VQMZ 4RVFA 3CC21 3J81f 4NBHA 3CCSZ 4HGYA 1X3ZA 2R7ZI 3CCLZ 3CCQ1 1AA6A 4MD8A 1VLAA 1TWHI 1YIJ1 3NDJA 3NH5A 3CC2Z 2IZ4A 2M6NA 1YJNZ 4E2YA 5CM2M 5C44I 2HU9A 3CCQZ 2OOYB 3HOYI 4A3II 2J6AA 3M3YI 2W04A 1YIJZ 4A3DI 2B63I 2VPZA 2DE5A 2PK7A 2P3YA 1WIIA 4NBCA 1RO2A 3FKII 2JA6I 4A3BI 2IV2X 3MZLB 1Q812 2YADA 1Q7Y2 3PO2I 2NVQI 1QYPA 3D6WA 2M48A 2NAPA 4E31A 1N8R2 1TFIA 3G711 2OOXB 1YUAA 1NP6A 5T64A 3CQZI 5IT9f 1NJI1 4MXUA 3I07A 2QKDA 1USPA 3CCRZ 2HF1A 2PMZA 1ZB8A 2RPRA 2VUGA 4NBBA 2E2II 3MZKB 3FQQA 5IP9I 1JWHC 3IR7A 1VQPZ 2QREB 2BJOA 3S15I 3D2LA 3LUSA 1P9NA 3S2HI 2W03A 1TWAI 3S17I 5A2Qb 2WB1A 1Q822 1YJW1 1VQ71 1KD12 4X6AI 4A3CI 2OTJ1 2IZ3A 1M1K1 2V8IA 1DL6A 2V8KA 5IT9b 2DE7A 1VQ51 1VQ61 3CCVZ 2ZAEB 1VQM1 1RLYA 3VMIA 1M901 4MD7A 2QLVB 4RVGA 2JNYA 1JJ2Y 3CCL1 4E2ZA 2VPYA 3G4S1 1R9TI 3CC4Z 2F4OA 1K732 4BY1I 3J80f 1QF8A 4E2WA 2Q51A 3HKZA 1YJN1 3GTLI 1TWFI 2O53A 3G4SZ 2NVXI 4NOZA 1K731 3PO3S 3KIHA 2H85A 4QTUA 1WCMI 3TE5B 1SFOI 3QWUA 2Y0SA 1VQ4Z 3CMEZ 3GCFA 2E9HA 2JA7I 1USPB 3GTQI 3U50C 2K5RA 2G2KA 3I561 4CL1A 3NH4A 3CCMZ 3HOXI 2GTIA 2JMOA 2RBLA 2I3CA 1K83I 2K3RA 2JA5I 1WJ2A 1VQOZ 2R92I 5C4JI 3S16I 3CXCZ 1LQLA 3NFZA 3I56Z 3G6E1 3S1QI 5A2Qf 3J80b 3GTGI 3CMAZ 1I3QI 3CCR1 1YJ9Z 1PFTA 2KPIA 3H0GI 3GTJI 3IF8A 4MONA 2JIMA 3H3VJ 3CXCY 3TDHB 2V3VA 1Q811 1YI2Z 1Q7Y1 2E7ZA 2QRDB 3G6EZ 4AYBA 2E2JI 1VQP1 1VQNZ 1KC82 4HGZA 5AN9F 4Y52I 1N8R1 1VQ81 4A3EI 3PO3I 3HOUI 3F3FC 3IX0A 1Q862 2LEXA 1Z01A 3F3PC 1VQ8Z 1RNIA 1VQ9Z 4BBRI 2JS4A 4DK1A 2WAQA 3ESWA 1N2FA 3J7A4 3S1RI 1Y1VS 3CCV1 4MRIA 2E2HI 4DGLA 4S1TA 1VQKZ 4BBSI 4NH1C 2RIQA 1S721 3CC41 2JIOA 4A3MI 4DQYB 3GTMS 1JJ2Z 2OTL1 1Q16A 1K8A2 1QVFZ 1YITZ 1Q821 3GTKI 1KD11 2AYDA 4QTTA 3CC71 3RZDI 1S72Z 2F4MA 2Q4ZA 4NBEA 1Y1WI 1W2BZ 2R6MA 1QVFY 2R93I 2OTLZ 1K8A1 2JUBA 1SIWA 1VQ41 1W2BY 3CME1 3VMHA 2JIQA 4A3KI 3S14I 1I6HI 3CC7Z 1S7MA 2GU2A 4A93I 1KQSY 2VPWA 5FLMI 1NUIA 3FQMA 5D1PA 2JIRA 4A3JI 3CCM1 1KRLA 1FDOA 2NVTI 3IFUA 5T6BA 2YU9I 3HOVI 1YUKA 3T4NB 5IP7I 2O4HA 2QEXZ 1VQO1 3CD6Z 3CCU1 1Y1VI 2RT9A 4A3GI 1RO4A 3OW2Z 3NH8A 4MD9A 3CMA1 1YJ91 4BY7I 2KI7B 5D1OA 4BXXI 5T67A 4E30A 1ZB9A 2P28A 3OW2Y 3GTMI 4NB8A 1YI21 2RHBA 3CCUZ 2DE6A 4RVDA 4HH4A 3EERA 1VQN1 3KIFA 2VUMI 3VMGA 1WW9A
chains in the Genus database with same CATH topology

4RVHA 3RZOI 4E33A 3M4OI 2V8JA 1L1OC 3CCJ1 1NJI2 1I50I 3JAMb 1TWCI 4NBFA 1TWGI 1VQ91 3S2DI 4MH4A 1X0TA 3J81b 4TNUA 3BG0B 1Z03A 2QRCB 2OZKA 3MONA 3GTPI 4NBAA 2QR1B 3CPWZ 1QVGZ 4E2XA 3CCJZ 1KC81 1VQK1 3EEDA 2PM9A 3VB9A 3CPWY 1ZH1A 1QVGY 2QA41 3G71Z 1Q861 5FLXf 3HOZI 3GTOI 3Q87A 3I4MI 1K9M2 1YIT1 4RV9A 4E32A 4NFRA 3I4NI 1YHQ1 3NDIA 4XX2A 3HOWI 1RQFA 2LIYA 2JR6A 2QA4Z 2AKLA 1X3WA 3GKQA 1M1K2 5C4XI 3I551 1K9M1 1VQL1 2JA8I 4EWCA 3S1MI 3K7AI 1YHQZ 4RS4A 4Y7NI 3S1NI 4NB9A 1M902 4A3LI 5D1OB 4NBGA 1RO0A 4NBDA 3P5JB 3I55Z 1VQLZ 3VTNA 3CCE1 2NVYI 1KQSZ 5C3EI 2GTHA 2VF1A 1YJWZ 2QEX1 1VQ7Z 4A3FI 3CD61 1ML8A 3CCS1 5LL6f 5FLXb 2OTJZ 1Z02A 3JAMf 3CCEZ 3BG1B 2EGTA 3D9XA 1VQ5Z 2LFUA 1VQ6Z 1VQMZ 4RVFA 3CC21 3J81f 4NBHA 3CCSZ 4HGYA 1X3ZA 2R7ZI 3CCLZ 3CCQ1 4MD8A 1VLAA 1TWHI 1YIJ1 3NDJA 3NH5A 3CC2Z 2IZ4A 2M6NA 1YJNZ 4E2YA 5CM2M 5C44I 2HU9A 3CCQZ 2OOYB 3HOYI 4A3II 2J6AA 3M3YI 2W04A 1YIJZ 4A3DI 2B63I 2DE5A 2PK7A 2P3YA 1WIIA 4NBCA 1RO2A 3FKII 2JA6I 4A3BI 3MZLB 1Q812 2YADA 1Q7Y2 3PO2I 2NVQI 1QYPA 3D6WA 2M48A 4E31A 1N8R2 1TFIA 3G711 2OOXB 1YUAA 1NP6A 5T64A 3CQZI 5IT9f 1NJI1 4MXUA 3I07A 2QKDA 1USPA 3CCRZ 2HF1A 2PMZA 1ZB8A 2RPRA 2VUGA 4NBBA 2E2II 3MZKB 3FQQA 5IP9I 1JWHC 1VQPZ 2QREB 2BJOA 3S15I 3LUSA 1P9NA 3S2HI 2W03A 1TWAI 3S17I 5A2Qb 2WB1A 1Q822 1YJW1 1VQ71 1KD12 4X6AI 4A3CI 2OTJ1 2IZ3A 1M1K1 2V8IA 1DL6A 2V8KA 5IT9b 2DE7A 1VQ51 1VQ61 3CCVZ 2ZAEB 1VQM1 1RLYA 3VMIA 1M901 4MD7A 2QLVB 4RVGA 2JNYA 1JJ2Y 3CCL1 4E2ZA 3G4S1 1R9TI 3CC4Z 2F4OA 1K732 4BY1I 3J80f 1QF8A 4E2WA 2Q51A 3HKZA 1YJN1 3GTLI 1TWFI 2O53A 3G4SZ 2NVXI 4NOZA 1K731 3PO3S 3KIHA 2H85A 4QTUA 1WCMI 3TE5B 1SFOI 3QWUA 2Y0SA 1VQ4Z 3CMEZ 3GCFA 2E9HA 2JA7I 1USPB 3GTQI 3U50C 2K5RA 2G2KA 3I561 4CL1A 3NH4A 3CCMZ 3HOXI 2GTIA 2JMOA 2RBLA 2I3CA 1K83I 2K3RA 2JA5I 1VQOZ 2R92I 5C4JI 3S16I 3CXCZ 1LQLA 3NFZA 3I56Z 3G6E1 3S1QI 5A2Qf 3J80b 3GTGI 3CMAZ 1I3QI 3CCR1 1YJ9Z 1PFTA 2KPIA 3H0GI 3GTJI 3IF8A 4MONA 3H3VJ 3CXCY 3TDHB 1Q811 1YI2Z 1Q7Y1 2QRDB 3G6EZ 4AYBA 2E2JI 1VQP1 1VQNZ 1KC82 4HGZA 5AN9F 4Y52I 1N8R1 1VQ81 4A3EI 3PO3I 3HOUI 3F3FC 3IX0A 1Q862 1Z01A 3F3PC 1VQ8Z 1RNIA 1VQ9Z 4BBRI 2JS4A 4DK1A 2WAQA 3ESWA 1N2FA 3J7A4 3S1RI 1Y1VS 3CCV1 4MRIA 2E2HI 4DGLA 4S1TA 1VQKZ 4BBSI 4NH1C 2RIQA 1S721 3CC41 4A3MI 4DQYB 3GTMS 1JJ2Z 2OTL1 1K8A2 1QVFZ 1YITZ 1Q821 3GTKI 1KD11 4QTTA 3CC71 3RZDI 1S72Z 2F4MA 2Q4ZA 4NBEA 1Y1WI 1W2BZ 2R6MA 1QVFY 2R93I 2OTLZ 1K8A1 2JUBA 1VQ41 1W2BY 3CME1 3VMHA 4A3KI 3S14I 1I6HI 3CC7Z 1S7MA 2GU2A 4A93I 1KQSY 5FLMI 1NUIA 3FQMA 5D1PA 4A3JI 3CCM1 1KRLA 2NVTI 3IFUA 5T6BA 2YU9I 3HOVI 1YUKA 3T4NB 5IP7I 2O4HA 2QEXZ 1VQO1 3CD6Z 3CCU1 1Y1VI 2RT9A 4A3GI 1RO4A 3OW2Z 3NH8A 4MD9A 3CMA1 1YJ91 4BY7I 2KI7B 5D1OA 4BXXI 5T67A 4E30A 1ZB9A 2P28A 3OW2Y 3GTMI 4NB8A 1YI21 2RHBA 3CCUZ 2DE6A 4RVDA 4HH4A 3EERA 1VQN1 3KIFA 2VUMI 3VMGA 1WW9A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2R7Z I;  3RZO I;  3M4O I;  4BBR I;  1VLA A;  1RLY A;  3VMI A;  1L1O C;  2JS4 A;  1TWH I;  1I50 I;  2JNY A;  1N2F A;  3ESW A;  3S1R I;  1TWC I;  1Y1V S;  4NBF A;  1R9T I;  1TWG I;  2F4O A;  5CM2 M;  2E2H I;  3S2D I;  5C44 I;  4MH4 A;  4BY1 I;  4BBS I;  3HOY I;  3GTP I;  4NBA A;  1WW9 A;  4A3I I;  2J6A A;  3M3Y I;  4A3M I;  3GTL I;  3GTM S;  4A3D I;  1TWF I;  2B63 I;  2DE5 A;  2PK7 A;  2NVX I;  2P3Y A;  4NOZ A;  4NBC A;  3PO3 S;  3VB9 A;  3FKI I;  2JA6 I;  4A3B I;  3GTK I;  4QTT A;  4QTU A;  1WCM I;  1SFO I;  3RZD I;  3PO2 I;  3HOZ I;  2NVQ I;  1QYP A;  2F4M A;  3D6W A;  3Q87 A;  4NBE A;  3GCF A;  1Y1W I;  3GTO I;  3I4M I;  2JA7 I;  2R93 I;  1USP B;  3GTQ I;  3I4N I;  3U50 C;  2K5R A;  1TFI A;  4XX2 A;  1YUA A;  3VMH A;  3HOW I;  2JR6 A;  4A3K I;  3CQZ I;  2AKL A;  1I6H I;  3S14 I;  1X3W A;  3GKQ A;  5C4X I;  3HOX I;  3I07 A;  2JA8 I;  4A93 I;  1USP A;  2HF1 A;  2RBL A;  3S1M I;  3K7A I;  1K83 I;  5FLM I;  1NUI A;  2JA5 I;  1ZB8 A;  2R92 I;  4Y7N I;  4NBB A;  3S1N I;  5C4J I;  4A3J I;  2E2I I;  1LQL A;  4NB9 A;  2NVT I;  3S16 I;  4A3L I;  3S1Q I;  2YU9 I;  3HOV I;  4NBG A;  3GTG I;  5IP7 I;  1I3Q I;  4NBD A;  1PFT A;  2KPI A;  5IP9 I;  3H0G I;  3GTJ I;  1Y1V I;  3H3V J;  4A3G I;  1RO4 A;  2NVY I;  2BJO A;  3S15 I;  5C3E I;  3LUS A;  4BY7 I;  3S2H I;  2E2J I;  4A3F I;  1ML8 A;  4BXX I;  4Y52 I;  1TWA I;  1ZB9 A;  3S17 I;  3GTM I;  4NB8 A;  4A3E I;  2DE6 A;  4X6A I;  3PO3 I;  3EER A;  3HOU I;  4A3C I;  2VUM I;  3VMG A;  4NBH A;  1DL6 A;  1X3Z A;  2DE7 A; 
#chains in the Genus database with same CATH topology
 4RVH A;  3RZO I;  4E33 A;  3M4O I;  2V8J A;  1L1O C;  3CCJ 1;  2JIP A;  1Y8C A;  1NJI 2;  1I50 I;  3JAM b;  1TWC I;  4NBF A;  1TWG I;  1VQ9 1;  3S2D I;  4MH4 A;  1X0T A;  3J81 b;  4TNU A;  3BG0 B;  1Z03 A;  2QRC B;  2OZK A;  3MON A;  1WZN A;  3GTP I;  4NBA A;  2QR1 B;  3CPW Z;  1QVG Z;  4E2X A;  3CCJ Z;  1KC8 1;  2V45 A;  2VPX A;  1VQK 1;  3EED A;  2PM9 A;  3VB9 A;  3CPW Y;  1ZH1 A;  1QVG Y;  2QA4 1;  3G71 Z;  1Q86 1;  5FLX f;  3HOZ I;  3GTO I;  3Q87 A;  3I4M I;  1K9M 2;  1YIT 1;  4RV9 A;  4E32 A;  4NFR A;  3I4N I;  1YHQ 1;  3NDI A;  4XX2 A;  3HOW I;  1RQF A;  2LIY A;  2JR6 A;  2QA4 Z;  2AKL A;  1X3W A;  3GKQ A;  1M1K 2;  5C4X I;  3I55 1;  1K9M 1;  1VQL 1;  2JA8 I;  4EWC A;  3S1M I;  3K7A I;  1YHQ Z;  4RS4 A;  4Y7N I;  3S1N I;  1QXF A;  4NB9 A;  1M90 2;  4A3L I;  5D1O B;  4NBG A;  1RO0 A;  4NBD A;  3P5J B;  3I55 Z;  1VQL Z;  3VTN A;  3CCE 1;  2NVY I;  1KQS Z;  5C3E I;  2GTH A;  2VF1 A;  1YJW Z;  2QEX 1;  1VQ7 Z;  4A3F I;  3CD6 1;  1ML8 A;  3CCS 1;  5LL6 f;  1FDI A;  5FLX b;  2OTJ Z;  1Z02 A;  3JAM f;  3CCE Z;  3BG1 B;  2EGT A;  3D9X A;  1VQ5 Z;  2LFU A;  1VQ6 Z;  1VQM Z;  4RVF A;  3CC2 1;  3J81 f;  4NBH A;  3CCS Z;  4HGY A;  1X3Z A;  2R7Z I;  3CCL Z;  3CCQ 1;  1AA6 A;  4MD8 A;  1VLA A;  1TWH I;  1YIJ 1;  3NDJ A;  3NH5 A;  3CC2 Z;  2IZ4 A;  2M6N A;  1YJN Z;  4E2Y A;  5CM2 M;  5C44 I;  2HU9 A;  3CCQ Z;  2OOY B;  3HOY I;  4A3I I;  2J6A A;  3M3Y I;  2W04 A;  1YIJ Z;  4A3D I;  2B63 I;  2VPZ A;  2DE5 A;  2PK7 A;  2P3Y A;  1WII A;  4NBC A;  1RO2 A;  3FKI I;  2JA6 I;  4A3B I;  2IV2 X;  3MZL B;  1Q81 2;  2YAD A;  1Q7Y 2;  3PO2 I;  2NVQ I;  1QYP A;  3D6W A;  2M48 A;  2NAP A;  4E31 A;  1N8R 2;  1TFI A;  3G71 1;  2OOX B;  1YUA A;  1NP6 A;  5T64 A;  3CQZ I;  5IT9 f;  1NJI 1;  4MXU A;  3I07 A;  2QKD A;  1USP A;  3CCR Z;  2HF1 A;  2PMZ A;  1ZB8 A;  2RPR A;  2VUG A;  4NBB A;  2E2I I;  3MZK B;  3FQQ A;  5IP9 I;  1JWH C;  3IR7 A;  1VQP Z;  2QRE B;  2BJO A;  3S15 I;  3D2L A;  3LUS A;  1P9N A;  3S2H I;  2W03 A;  1TWA I;  3S17 I;  5A2Q b;  2WB1 A;  1Q82 2;  1YJW 1;  1VQ7 1;  1KD1 2;  4X6A I;  4A3C I;  2OTJ 1;  2IZ3 A;  1M1K 1;  2V8I A;  1DL6 A;  2V8K A;  5IT9 b;  2DE7 A;  1VQ5 1;  1VQ6 1;  3CCV Z;  2ZAE B;  1VQM 1;  1RLY A;  3VMI A;  1M90 1;  4MD7 A;  2QLV B;  4RVG A;  2JNY A;  1JJ2 Y;  3CCL 1;  4E2Z A;  2VPY A;  3G4S 1;  1R9T I;  3CC4 Z;  2F4O A;  1K73 2;  4BY1 I;  3J80 f;  1QF8 A;  4E2W A;  2Q51 A;  3HKZ A;  1YJN 1;  3GTL I;  1TWF I;  2O53 A;  3G4S Z;  2NVX I;  4NOZ A;  1K73 1;  3PO3 S;  3KIH A;  2H85 A;  4QTU A;  1WCM I;  3TE5 B;  1SFO I;  3QWU A;  2Y0S A;  1VQ4 Z;  3CME Z;  3GCF A;  2E9H A;  2JA7 I;  1USP B;  3GTQ I;  3U50 C;  2K5R A;  2G2K A;  3I56 1;  4CL1 A;  3NH4 A;  3CCM Z;  3HOX I;  2GTI A;  2JMO A;  2RBL A;  2I3C A;  1K83 I;  2K3R A;  2JA5 I;  1WJ2 A;  1VQO Z;  2R92 I;  5C4J I;  3S16 I;  3CXC Z;  1LQL A;  3NFZ A;  3I56 Z;  3G6E 1;  3S1Q I;  5A2Q f;  3J80 b;  3GTG I;  3CMA Z;  1I3Q I;  3CCR 1;  1YJ9 Z;  1PFT A;  2KPI A;  3H0G I;  3GTJ I;  3IF8 A;  4MON A;  2JIM A;  3H3V J;  3CXC Y;  3TDH B;  2V3V A;  1Q81 1;  1YI2 Z;  1Q7Y 1;  2E7Z A;  2QRD B;  3G6E Z;  4AYB A;  2E2J I;  1VQP 1;  1VQN Z;  1KC8 2;  4HGZ A;  5AN9 F;  4Y52 I;  1N8R 1;  1VQ8 1;  4A3E I;  3PO3 I;  3HOU I;  3F3F C;  3IX0 A;  1Q86 2;  2LEX A;  1Z01 A;  3F3P C;  1VQ8 Z;  1RNI A;  1VQ9 Z;  4BBR I;  2JS4 A;  4DK1 A;  2WAQ A;  3ESW A;  1N2F A;  3J7A 4;  3S1R I;  1Y1V S;  3CCV 1;  4MRI A;  2E2H I;  4DGL A;  4S1T A;  1VQK Z;  4BBS I;  4NH1 C;  2RIQ A;  1S72 1;  3CC4 1;  2JIO A;  4A3M I;  4DQY B;  3GTM S;  1JJ2 Z;  2OTL 1;  1Q16 A;  1K8A 2;  1QVF Z;  1YIT Z;  1Q82 1;  3GTK I;  1KD1 1;  2AYD A;  4QTT A;  3CC7 1;  3RZD I;  1S72 Z;  2F4M A;  2Q4Z A;  4NBE A;  1Y1W I;  1W2B Z;  2R6M A;  1QVF Y;  2R93 I;  2OTL Z;  1K8A 1;  2JUB A;  1SIW A;  1VQ4 1;  1W2B Y;  3CME 1;  3VMH A;  2JIQ A;  4A3K I;  3S14 I;  1I6H I;  3CC7 Z;  1S7M A;  2GU2 A;  4A93 I;  1KQS Y;  2VPW A;  5FLM I;  1NUI A;  3FQM A;  5D1P A;  2JIR A;  4A3J I;  3CCM 1;  1KRL A;  1FDO A;  2NVT I;  3IFU A;  5T6B A;  2YU9 I;  3HOV I;  1YUK A;  3T4N B;  5IP7 I;  2O4H A;  2QEX Z;  1VQO 1;  3CD6 Z;  3CCU 1;  1Y1V I;  2RT9 A;  4A3G I;  1RO4 A;  3OW2 Z;  3NH8 A;  4MD9 A;  3CMA 1;  1YJ9 1;  4BY7 I;  2KI7 B;  5D1O A;  4BXX I;  5T67 A;  4E30 A;  1ZB9 A;  2P28 A;  3OW2 Y;  3GTM I;  4NB8 A;  1YI2 1;  2RHB A;  3CCU Z;  2DE6 A;  4RVD A;  4HH4 A;  3EER A;  1VQN 1;  3KIF A;  2VUM I;  3VMG A;  1WW9 A; 
#chains in the Genus database with same CATH homology
 4RVH A;  3RZO I;  4E33 A;  3M4O I;  2V8J A;  1L1O C;  3CCJ 1;  1NJI 2;  1I50 I;  3JAM b;  1TWC I;  4NBF A;  1TWG I;  1VQ9 1;  3S2D I;  4MH4 A;  1X0T A;  3J81 b;  4TNU A;  3BG0 B;  1Z03 A;  2QRC B;  2OZK A;  3MON A;  3GTP I;  4NBA A;  2QR1 B;  3CPW Z;  1QVG Z;  4E2X A;  3CCJ Z;  1KC8 1;  1VQK 1;  3EED A;  2PM9 A;  3VB9 A;  3CPW Y;  1ZH1 A;  1QVG Y;  2QA4 1;  3G71 Z;  1Q86 1;  5FLX f;  3HOZ I;  3GTO I;  3Q87 A;  3I4M I;  1K9M 2;  1YIT 1;  4RV9 A;  4E32 A;  4NFR A;  3I4N I;  1YHQ 1;  3NDI A;  4XX2 A;  3HOW I;  1RQF A;  2LIY A;  2JR6 A;  2QA4 Z;  2AKL A;  1X3W A;  3GKQ A;  1M1K 2;  5C4X I;  3I55 1;  1K9M 1;  1VQL 1;  2JA8 I;  4EWC A;  3S1M I;  3K7A I;  1YHQ Z;  4RS4 A;  4Y7N I;  3S1N I;  4NB9 A;  1M90 2;  4A3L I;  5D1O B;  4NBG A;  1RO0 A;  4NBD A;  3P5J B;  3I55 Z;  1VQL Z;  3VTN A;  3CCE 1;  2NVY I;  1KQS Z;  5C3E I;  2GTH A;  2VF1 A;  1YJW Z;  2QEX 1;  1VQ7 Z;  4A3F I;  3CD6 1;  1ML8 A;  3CCS 1;  5LL6 f;  5FLX b;  2OTJ Z;  1Z02 A;  3JAM f;  3CCE Z;  3BG1 B;  2EGT A;  3D9X A;  1VQ5 Z;  2LFU A;  1VQ6 Z;  1VQM Z;  4RVF A;  3CC2 1;  3J81 f;  4NBH A;  3CCS Z;  4HGY A;  1X3Z A;  2R7Z I;  3CCL Z;  3CCQ 1;  4MD8 A;  1VLA A;  1TWH I;  1YIJ 1;  3NDJ A;  3NH5 A;  3CC2 Z;  2IZ4 A;  2M6N A;  1YJN Z;  4E2Y A;  5CM2 M;  5C44 I;  2HU9 A;  3CCQ Z;  2OOY B;  3HOY I;  4A3I I;  2J6A A;  3M3Y I;  2W04 A;  1YIJ Z;  4A3D I;  2B63 I;  2DE5 A;  2PK7 A;  2P3Y A;  1WII A;  4NBC A;  1RO2 A;  3FKI I;  2JA6 I;  4A3B I;  3MZL B;  1Q81 2;  2YAD A;  1Q7Y 2;  3PO2 I;  2NVQ I;  1QYP A;  3D6W A;  2M48 A;  4E31 A;  1N8R 2;  1TFI A;  3G71 1;  2OOX B;  1YUA A;  1NP6 A;  5T64 A;  3CQZ I;  5IT9 f;  1NJI 1;  4MXU A;  3I07 A;  2QKD A;  1USP A;  3CCR Z;  2HF1 A;  2PMZ A;  1ZB8 A;  2RPR A;  2VUG A;  4NBB A;  2E2I I;  3MZK B;  3FQQ A;  5IP9 I;  1JWH C;  1VQP Z;  2QRE B;  2BJO A;  3S15 I;  3LUS A;  1P9N A;  3S2H I;  2W03 A;  1TWA I;  3S17 I;  5A2Q b;  2WB1 A;  1Q82 2;  1YJW 1;  1VQ7 1;  1KD1 2;  4X6A I;  4A3C I;  2OTJ 1;  2IZ3 A;  1M1K 1;  2V8I A;  1DL6 A;  2V8K A;  5IT9 b;  2DE7 A;  1VQ5 1;  1VQ6 1;  3CCV Z;  2ZAE B;  1VQM 1;  1RLY A;  3VMI A;  1M90 1;  4MD7 A;  2QLV B;  4RVG A;  2JNY A;  1JJ2 Y;  3CCL 1;  4E2Z A;  3G4S 1;  1R9T I;  3CC4 Z;  2F4O A;  1K73 2;  4BY1 I;  3J80 f;  1QF8 A;  4E2W A;  2Q51 A;  3HKZ A;  1YJN 1;  3GTL I;  1TWF I;  2O53 A;  3G4S Z;  2NVX I;  4NOZ A;  1K73 1;  3PO3 S;  3KIH A;  2H85 A;  4QTU A;  1WCM I;  3TE5 B;  1SFO I;  3QWU A;  2Y0S A;  1VQ4 Z;  3CME Z;  3GCF A;  2E9H A;  2JA7 I;  1USP B;  3GTQ I;  3U50 C;  2K5R A;  2G2K A;  3I56 1;  4CL1 A;  3NH4 A;  3CCM Z;  3HOX I;  2GTI A;  2JMO A;  2RBL A;  2I3C A;  1K83 I;  2K3R A;  2JA5 I;  1VQO Z;  2R92 I;  5C4J I;  3S16 I;  3CXC Z;  1LQL A;  3NFZ A;  3I56 Z;  3G6E 1;  3S1Q I;  5A2Q f;  3J80 b;  3GTG I;  3CMA Z;  1I3Q I;  3CCR 1;  1YJ9 Z;  1PFT A;  2KPI A;  3H0G I;  3GTJ I;  3IF8 A;  4MON A;  3H3V J;  3CXC Y;  3TDH B;  1Q81 1;  1YI2 Z;  1Q7Y 1;  2QRD B;  3G6E Z;  4AYB A;  2E2J I;  1VQP 1;  1VQN Z;  1KC8 2;  4HGZ A;  5AN9 F;  4Y52 I;  1N8R 1;  1VQ8 1;  4A3E I;  3PO3 I;  3HOU I;  3F3F C;  3IX0 A;  1Q86 2;  1Z01 A;  3F3P C;  1VQ8 Z;  1RNI A;  1VQ9 Z;  4BBR I;  2JS4 A;  4DK1 A;  2WAQ A;  3ESW A;  1N2F A;  3J7A 4;  3S1R I;  1Y1V S;  3CCV 1;  4MRI A;  2E2H I;  4DGL A;  4S1T A;  1VQK Z;  4BBS I;  4NH1 C;  2RIQ A;  1S72 1;  3CC4 1;  4A3M I;  4DQY B;  3GTM S;  1JJ2 Z;  2OTL 1;  1K8A 2;  1QVF Z;  1YIT Z;  1Q82 1;  3GTK I;  1KD1 1;  4QTT A;  3CC7 1;  3RZD I;  1S72 Z;  2F4M A;  2Q4Z A;  4NBE A;  1Y1W I;  1W2B Z;  2R6M A;  1QVF Y;  2R93 I;  2OTL Z;  1K8A 1;  2JUB A;  1VQ4 1;  1W2B Y;  3CME 1;  3VMH A;  4A3K I;  3S14 I;  1I6H I;  3CC7 Z;  1S7M A;  2GU2 A;  4A93 I;  1KQS Y;  5FLM I;  1NUI A;  3FQM A;  5D1P A;  4A3J I;  3CCM 1;  1KRL A;  2NVT I;  3IFU A;  5T6B A;  2YU9 I;  3HOV I;  1YUK A;  3T4N B;  5IP7 I;  2O4H A;  2QEX Z;  1VQO 1;  3CD6 Z;  3CCU 1;  1Y1V I;  2RT9 A;  4A3G I;  1RO4 A;  3OW2 Z;  3NH8 A;  4MD9 A;  3CMA 1;  1YJ9 1;  4BY7 I;  2KI7 B;  5D1O A;  4BXX I;  5T67 A;  4E30 A;  1ZB9 A;  2P28 A;  3OW2 Y;  3GTM I;  4NB8 A;  1YI2 1;  2RHB A;  3CCU Z;  2DE6 A;  4RVD A;  4HH4 A;  3EER A;  1VQN 1;  3KIF A;  2VUM I;  3VMG A;  1WW9 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

5C4XI

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations