2O5JD

Crystal structure of the t. thermophilus rnap polymerase elongation complex with the ntp substrate analog
Total Genus 275
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
275
sequence length
1504
structure length
1264
Chain Sequence
KKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFASILVVKARVYPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKKGAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGVCQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural basis for substrate loading in bacterial RNA polymerase.
pubmed doi rcsb
molecule keywords 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP
molecule tags Transferase/dna-rna hybrid
total genus 275
structure length 1264
sequence length 1504
chains with identical sequence N
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2006-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2
D PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3
D PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1
D PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5
D PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.132.30 Mainly Alpha Orthogonal Bundle Topoisomerase I; Chain A, domain 4 Topoisomerase I; Chain A, domain 4 2o5jD05
1.10.274.100 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2o5jD04
2.20.28.170 Mainly Beta Single Sheet Rubrerythrin, domain 2 Rubrerythrin, domain 2 2o5jD07
2.40.40.70 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 2o5jD03
2CW0D 1TWCA 2R7ZA 2VUMA 2JA6A 2O5JD 2PMZA 3GTLA 2B63A 1Y1VA 2NVXA 3CQZA 1R9TA 1K83A 1SFOA 1TWGA 3FKIA 3GTJA 1I50A 4C2MA 2A68D 2R92A 1YNND 1TWFA 2WAQA 2A69D 1Y1WA 1ZYRD 1HQMD 2Y0SA 4AYBA 3GTGA 3HKZA 3GTMA 2JA7A 1WCMA 3GTPA 2E2HA 1TWAA 1IW7D 1SMYD 2NVYA 2A6HD 2E2IA 3GTQA 1TWHA 2A6ED 1I6VD 3GTKA 3GTOA 2WB1A 2R93A 4QIWA 1I3QA 2BE5D 2YU9A 3H0GA 2JA5A 1YNJD
chains in the Genus database with same CATH superfamily
1GE9A 2KI8A 3FKIL 3GTJL 3DU5A 3LWPB 2HWGA 1AW8B 1E61A 1I50A 2R4GA 3LF9A 1FHMA 2JIOA 1PFWA 3LPEB 3M4AA 4BABA 4GA5A 5JSBB 2X0QA 4POGA 2HVYC 5EIOC 3H99A 4CRZA 2LPJA 5GAGc 1TWAA 2RDVA 1EU1A 1SC7A 2A6HD 2MX8A 1VZHA 2AQCA 1YV1A 2PMZP 2YIIA 1EK8A 1WJVA 3ML1A 1QYBA 1Q16A 4AR3A 4GFQA 1NXEA 3GTLA 3H3VM 1EZBA 3KYVA 1BE7A 3QWZA 1EH1A 1FDOA 5C4XL 4BBSL 4NOHA 1ZYRD 4LMOA 1CADA 3X2NA 2B9SB 2KN9A 3HOUL 1FDIA 5DM71 4H3TA 3GTMA 2X0OA 3H97A 3HU3A 1SMYD 4A3BL 5EPPA 1TWHA 2A6ED 2AQLA 3GTKA 2PVXA 3KYUA 4AHZA 2R7ZL 5JSNB 1NH3A 1RYTA 2PJJA 2J9UB 1JYBA 1K83L 2KQAA 1E8JA 4JS7A 4KLNA 4AVRA 1DX8A 2V0EA 3X2PA 2VPWA 2ERSA 4CRYG 4AI3A 4ZN1B 3B08B 3M3GA 4CEHA 4B8CD 5FLML 1VZGA 1NXGA 2G6GA 4XXBB 1K4TA 3D30A 3K7AL 3QQ8A 1FHHA 1OWCA 3PWFA 4A3DL 3HKZA 1B2OA 3GTPA 3IR6A 3TM7B 1WQFA 1PQFA 3GTQA 2XJQA 3KYXA 1A36A 2NVXL 4BAAA 1YUZA 4A3IL 1SMMA 5MFPA 2AYJA 5GLYA 3K58A 3X2KA 1Y1WL 3CQZA 1S2ZA 1H0HA 1R9TA 3TIWA 2XJUA 4C2MA 3RYGA 3LR8A 2WAQA 3ZG6A 1E32A 1KQFA 2XJRA 4C5SA 1T9PA 2MQAA 4CS0A 2VL6A 2Y0SA 3GTGA 2YUJA 1WCMA 2M6OA 4C3JL 2E2JL 2E2IA 4G6BA 2JIPA 1C09A 3GTOA 5FTJA 5IY0A 2WB1A 2B63L 3JR7A 2AUSB 1TWCA 2CKAA 1G8KA 1VCXA 4EJ3A 1T6PA 1Y1VA 3DU6A 2AE0X 4AN8A 4LHLA 3LNLA 1LKPA 4KC6A 4KODA 3S1QL 4ENGA 2Y0NA 3NFPI 5GLFA 1LPQA 3S1NL 3MPSA 2JA7A 4AONB 4CEIA 1I3QL 5EINC 3S1RL 4AOKB 1EZAA 4AAYA 3P8BA 2VPXA 2PPTA 2VUML 1BW3A 4QIWA 5C3EL 1BRFA 3H9CA 2PVEA 3S2HL 3PO2L 3B0AB 2BH0A 5AI3A 4JCWA 2H12A 3PKJA 1TWFL 5GADc 1YLEA 1ODHA 3QC8A 1BW4A 2N3EA 4A3FL 1CZ5A 4AHYA 2R92A 5M3ML 3PLXB 1SEUA 2FIPA 2JI2A 1L8FA 1PYUB 4TPUA 2R93L 3X2OA 4C5RA 4L8IA 4JAFA 2DSXA 1R0GA 4WFN1 1Y5IA 2DMRA 2JA6A 1KQGA 2G5DA 4JAEA 3OUGA 1ISEA 1RDVA 3A44A 5AI2A 3U4QA 3LWVB 5MLC9 2M4YA 2MS3A 2PYAA 4AYBP 2EZBA 3WVOA 2Z3QB 1OWBA 3VPBE 4NOLA 1RDGA 2NVYL 1V9MA 4POFA 3PL5A 4L48A 4UY81 2LTHA 4D3YA 3WWNB 2FIOA 3IR7A 1VZIA 2NVQL 2K3NA 1T9QA 5IP9L 2PI8A 2LPIA 4XGHA 2V0FA 7RXNA 1DMSA 3QQCE 1R9TL 1B13A 1RR8C 4V2RA 4CEJA 4A3ML 3HOWL 1TWGL 1EJ9A 2PMZA 2APOB 5FJ8L 4RV0A 3IAYA 5MLC3 3FKIA 3GTJA 3LRDA 2A68D 3K5OA 3RZ6A 1WCML 5T5MD 2EZCA 3LR2A 4YWMA 4CQ5A 2E2IL 4FBSA 3GTOL 3J7Z1 5FTLA 1PT0A 5MF6A 1I6HL 2YU9L 3RZTA 2F4QA 3ENGA 1R49A 1Y1VL 5DM61 4KAWX 1H7VA 5IZ2A 4Q5VA 3H0GA 2M6PA 1T9OA 1OGYA 1DMRA 3J7Y1 5C9HA 2QL0A 3K59A 3S2DL 1PQHA 4A3LL 1LKMA 4AI0A 2ENGA 3X2IA 1IU6A 3KYYA 1PFVA 3MSUA 2JI1A 2RFKB 2GMGA 3LWRB 1PFUA 1G8JA 2K2DA 3IU3I 1BFYA 1IW7D 4A3EL 2JA5L 8RXNA 4Y52L 5GAEc 1R0FA 3IR5A 3S16L 2EZAA 1Z92B 5DYIA 2R7ZA 3KYWA 3M4OL 1I50L 5H4UA 5JVH1 3H9BA 3HOVL 1PT1A 1K83A 4NOKA 1PZXA 2X0PA 1T8IA 3PO3L 1HQMD 4JLRC 4AHWA 1DD5A 1PYQA 1TWAL 1TMOA 2JIMA 1SMWA 3HU2A 1LTLA 5IYBL 3I4ML 5FTMA 1BQ8A 5MGNA 1SIWA 1DVBA 1QDNA 3GTLL 1NNQA 4Q5GA 2LYIA 4FERA 1CAAA 1MIUA 5C18A 1WQHA 1Q8IA 2CW0D 3SUMA 1RB9A 4C2M1 1R7RA 3HU1A 2NAPA 5H1Sc 3X2MA 2PJHB 1SFOA 1Y2MA 2PSMC 1HD5A 4KB2A 4A3GL 1E18A 1Y1WA 4FXDA 3GTML 1Y4ZA 2C45A 2EY4E 2E7ZA 4IP8A 2NVTL 2VPYA 1TWHL 4IP9A 3GTKL 2C6AA 2V45A 1W27A 3S14L 4K9FA 4YWLA 2JI3A 1OA7A 2XJVA 3QQ7A 3LWQB 2GAEA 2M4VA 1QCVA 4A3CL 4C3IL 2F5JA 3WWLA 3O5AA 5GM9A 2NYAA 1Y698 2XJTA 4D3ZA 3P2AA 5GAHc 2B63A 4C6GA 1H5NA 4AI1A 1R27A 1RWDA 4AHXA 1R0JA 3LWOB 1R0IA 4OYDB 1YNND 4FGUA 1TL8A 1S3SA 2VK9A 4NOMA 4AR5A 3PIP1 1PQEA 4KO8A 3KYLA 3GTPL 2PICA 3EZEA 5FTKA 2NYDA 5K2ME 1YK4A 3GTQL 1IROA 6RXNA 2E2HA 3H0GL 5CQGA 2LCQA 1F4LA 5M3FL 3SUJA 4AZDA 4GS7D 5M5XL 3S1ML 3HJWB 1ZRPA 1I3QA 5IYCL 2BE5D 3CQZL 5C4JL 3SUKA 5RXNA 1S24A 2VUMA 3EZAA 1B71A 4TVMA 5IYDL 3S17L 2LKMB 4JAGA 1WC2A 5FTNA 1A35A 1S30A 2MX9A 2XJSA 1RYQA 4ZN3B 3CZBA 2HROA 1E5VA 3HOZL 1BQ9A 4A3KL 1TWFA 3GTGL 1PPYA 4O26A 1K4SA 4A93L 4X6AL 3S15L 3HKZP 1N10A 3K5MA 3CF2A 1RRJA 4BY7L 4AYBA 1WQGA 2Z3RB 4QCLA 4KDDA 3QVDA 4DMRA 3U44A 4FFTA 3K5NA 2ERJA 5IP7L 1TWCL 1I6VD 3MAQA 5M5YL 2R93A 3X2HA 1ZYMA 3RZDL 2VPZA 1AA6A 3FDJA 3PZAA 1ZC1A 2K3QA 3LHPS 1T6JA 2WAQP 4C5UA 1YUXA 1E60A 4AHCA 2KKDA 2XJPA 2Y0SP 2A69D 3X2LA 2JA7L 4LHNA 4KDIA 1PFYA 4JJOA 5MFZA 2V3BB 1QQTA 2K3OA 3SULA 3MQKB 1R5ZA 2JIRA 3X2JA 4KDLA 2L0ZA 2N1DB 3K57A 5DYGA 4AR6A 2JIQA 2WB1P 2NVYA 1UHEA 4BBRL 1CZ4A 4C3HL 4A3JL 4JP6A 3HAXC 5B6CA 1UHDA 1SFOL 1YNJD 3NZ4A 1B2JA 2HCZX 4F3EA 3K5LA 2R92L 4ZM7A 2C6BA 3I4NL 1VC3B 1TWGA 3K35A 1SMUA 3M3YL 5GLXA 5C1BA 3EZBA 3LR6A 1P7PA 3PIO1 4GA6A 1QCSA 3DMRA 5AN9H 2PNWA 2EEOB 2CKCA 2V3VA 2HR5A 4V2QA 3HOYL 2ZIXA 4QIWP 4Y7NL 1IS1A 2JA8L 2JA6L 4FYDA 2B5ID 1TGOA 2YU9A 4RXNA 4FG4A 2O5JD 3HOXL 1A31A 4U671 2NVXA 4BY1L 4E6YA 3RZOL 1IU5A 1OA9A 4ME3A 5T5ID 3P9AA 1IRNA 3SJRA 3HJYB 1WLFA 2CR8A 4JADA 3SS2A 2E2HL 4D7ZB 3PKIA 1LKOA 2IV2X 4JP7A 4FG2A 5C44L 4AI2A 4V196 4BXXL 4AR4A 2MP0A 3X2GA 1R0HA 5M5WL 1CR5A 1YK5A 4KB4A 2JA5A 5JVG1
chains in the Genus database with same CATH topology
1GE9A 2KI8A 3DU5A 1AW8B 1E61A 1I50A 2R4GA 3LF9A 1FHMA 2JIOA 3LPEB 3M4AA 4GA5A 5JSBB 2X0QA 4POGA 5EIOC 4CRZA 2LPJA 5GAGc 1TWAA 2RDVA 1EU1A 1SC7A 2A6HD 2MX8A 1VZHA 1YV1A 1EK8A 1WJVA 3ML1A 1QYBA 1Q16A 4AR3A 4GFQA 1NXEA 3GTLA 3KYVA 1BE7A 3QWZA 1EH1A 1FDOA 4NOHA 1ZYRD 4LMOA 1CADA 2B9SB 2KN9A 1FDIA 5DM71 4H3TA 3GTMA 2X0OA 3HU3A 1SMYD 5EPPA 1TWHA 2A6ED 2AQLA 3GTKA 2PVXA 3KYUA 4AHZA 5JSNB 1NH3A 1RYTA 2PJJA 2J9UB 1JYBA 1E8JA 4KLNA 1DX8A 2V0EA 2VPWA 2ERSA 4CRYG 4AI3A 4ZN1B 3B08B 4CEHA 4B8CD 1VZGA 1NXGA 2G6GA 4XXBB 1K4TA 3QQ8A 1FHHA 1OWCA 3PWFA 3HKZA 1B2OA 3GTPA 3IR6A 3TM7B 1WQFA 1PQFA 3GTQA 2XJQA 3KYXA 1A36A 1YUZA 1SMMA 5MFPA 2AYJA 3K58A 3CQZA 1S2ZA 1H0HA 1R9TA 3TIWA 2XJUA 4C2MA 3RYGA 3LR8A 2WAQA 3ZG6A 1E32A 1KQFA 2XJRA 1T9PA 2MQAA 4CS0A 2VL6A 2Y0SA 3GTGA 2YUJA 1WCMA 2M6OA 2E2IA 4G6BA 2JIPA 1C09A 3GTOA 5FTJA 5IY0A 2WB1A 1TWCA 2CKAA 1G8KA 1VCXA 4EJ3A 2AE0X 1Y1VA 3DU6A 4AN8A 4LHLA 3LNLA 1LKPA 4KC6A 4KODA 2Y0NA 3NFPI 5GLFA 1LPQA 3MPSA 2JA7A 4AONB 4CEIA 5EINC 4AOKB 4AAYA 3P8BA 2VPXA 2PPTA 4QIWA 1BRFA 2PVEA 3B0AB 5AI3A 2H12A 3PKJA 5GADc 1YLEA 1ODHA 3QC8A 2N3EA 1CZ5A 4AHYA 2R92A 3PLXB 1SEUA 2FIPA 2JI2A 1PYUB 4TPUA 4L8IA 4JAFA 2DSXA 1R0GA 4WFN1 1Y5IA 2DMRA 2JA6A 1KQGA 2G5DA 4JAEA 3OUGA 1ISEA 1RDVA 3A44A 5AI2A 3U4QA 5MLC9 2M4YA 2MS3A 2PYAA 3WVOA 2Z3QB 1OWBA 3VPBE 4NOLA 1RDGA 1V9MA 4POFA 4UY81 2LTHA 4D3YA 3WWNB 2FIOA 3IR7A 1VZIA 2K3NA 1T9QA 2PI8A 2LPIA 4XGHA 2V0FA 7RXNA 1DMSA 3QQCE 1B13A 1RR8C 4CEJA 1EJ9A 2PMZA 4RV0A 3IAYA 5MLC3 3FKIA 3GTJA 3LRDA 2A68D 3K5OA 3RZ6A 5T5MD 3LR2A 4YWMA 4FBSA 3J7Z1 5FTLA 1PT0A 5MF6A 3RZTA 2F4QA 1R49A 5DM61 4KAWX 1H7VA 5IZ2A 4Q5VA 3H0GA 2M6PA 1T9OA 1OGYA 1DMRA 3J7Y1 5C9HA 2QL0A 3K59A 1PQHA 1LKMA 4AI0A 1IU6A 3KYYA 3MSUA 2JI1A 2GMGA 1G8JA 2K2DA 3IU3I 1BFYA 1IW7D 8RXNA 5GAEc 1R0FA 3IR5A 1Z92B 5DYIA 2R7ZA 3KYWA 5JVH1 1PT1A 1K83A 4NOKA 2X0PA 1T8IA 1HQMD 4JLRC 4AHWA 1DD5A 1PYQA 1TMOA 2JIMA 1SMWA 3HU2A 1LTLA 5FTMA 1BQ8A 5MGNA 1SIWA 1DVBA 1QDNA 1NNQA 4Q5GA 2LYIA 1CAAA 1MIUA 5C18A 1WQHA 1Q8IA 2CW0D 1RB9A 1R7RA 3HU1A 2NAPA 5H1Sc 2PJHB 1SFOA 2PSMC 4KB2A 1E18A 1Y1WA 4FXDA 1Y4ZA 2C45A 2E7ZA 4IP8A 2VPYA 4IP9A 2V45A 2C6AA 4K9FA 4YWLA 2JI3A 2XJVA 3QQ7A 2GAEA 2M4VA 1QCVA 2F5JA 3WWLA 3O5AA 2NYAA 1Y698 2XJTA 4D3ZA 3P2AA 5GAHc 2B63A 1H5NA 1R27A 4AI1A 1RWDA 4AHXA 1R0JA 1R0IA 4OYDB 1YNND 4FGUA 1TL8A 1S3SA 2VK9A 4NOMA 4AR5A 3PIP1 1PQEA 4KO8A 3KYLA 2PICA 5FTKA 2NYDA 5K2ME 1YK4A 1IROA 6RXNA 2E2HA 5CQGA 2LCQA 4AZDA 4GS7D 1ZRPA 1I3QA 2BE5D 5RXNA 1S24A 2VUMA 1B71A 4TVMA 2LKMB 4JAGA 5FTNA 1A35A 1S30A 2MX9A 2XJSA 1RYQA 4ZN3B 3CZBA 1E5VA 1BQ9A 1TWFA 1PPYA 4O26A 1K4SA 3CF2A 3K5MA 1RRJA 4AYBA 1WQGA 2Z3RB 4QCLA 4KDDA 3QVDA 4DMRA 3U44A 3K5NA 2ERJA 1I6VD 3MAQA 2R93A 2VPZA 1AA6A 3PZAA 1ZC1A 2K3QA 3LHPS 1YUXA 1E60A 4AHCA 2KKDA 2XJPA 2A69D 4LHNA 4KDIA 5MFZA 2V3BB 2K3OA 1R5ZA 2JIRA 4KDLA 2L0ZA 2N1DB 3K57A 5DYGA 4AR6A 2JIQA 2NVYA 1UHEA 1CZ4A 5B6CA 1UHDA 1YNJD 1B2JA 4F3EA 3K5LA 2C6BA 1VC3B 1TWGA 3K35A 1SMUA 5C1BA 3LR6A 3PIO1 4GA6A 1QCSA 3DMRA 5AN9H 2PNWA 2EEOB 2CKCA 2V3VA 2HR5A 2ZIXA 1IS1A 4FYDA 2B5ID 1TGOA 2YU9A 4RXNA 2O5JD 1A31A 4U671 2NVXA 4E6YA 1IU5A 4ME3A 5T5ID 3P9AA 1IRNA 3SJRA 1WLFA 2CR8A 4JADA 3SS2A 4D7ZB 3PKIA 1LKOA 2IV2X 4AI2A 4V196 4AR4A 1R0HA 1CR5A 1YK5A 4KB4A 2JA5A 5JVG1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CW0 D;  1TWC A;  2R7Z A;  2VUM A;  2JA6 A;  2O5J D;  2PMZ A;  3GTL A;  2B63 A;  1Y1V A;  2NVX A;  3CQZ A;  1R9T A;  1K83 A;  1SFO A;  1TWG A;  3FKI A;  3GTJ A;  1I50 A;  4C2M A;  2A68 D;  2R92 A;  1YNN D;  1TWF A;  2WAQ A;  2A69 D;  1Y1W A;  1ZYR D;  1HQM D;  2Y0S A;  4AYB A;  3GTG A;  3HKZ A;  3GTM A;  2JA7 A;  1WCM A;  3GTP A;  2E2H A;  1TWA A;  1IW7 D;  1SMY D;  2NVY A;  2A6H D;  2E2I A;  3GTQ A;  1TWH A;  2A6E D;  1I6V D;  3GTK A;  3GTO A;  2WB1 A;  2R93 A;  4QIW A;  1I3Q A;  2BE5 D;  2YU9 A;  3H0G A;  2JA5 A;  1YNJ D; 
#chains in the Genus database with same CATH topology
 1GE9 A;  2KI8 A;  3FKI L;  3GTJ L;  3DU5 A;  3LWP B;  2HWG A;  1AW8 B;  1E61 A;  1I50 A;  2R4G A;  3LF9 A;  1FHM A;  2JIO A;  1PFW A;  3LPE B;  3M4A A;  4BAB A;  4GA5 A;  5JSB B;  2X0Q A;  4POG A;  2HVY C;  5EIO C;  3H99 A;  4CRZ A;  2LPJ A;  5GAG c;  1TWA A;  2RDV A;  1EU1 A;  1SC7 A;  2A6H D;  2MX8 A;  1VZH A;  2AQC A;  1YV1 A;  2PMZ P;  2YII A;  1EK8 A;  1WJV A;  3ML1 A;  1QYB A;  1Q16 A;  4AR3 A;  4GFQ A;  1NXE A;  3GTL A;  3H3V M;  1EZB A;  3KYV A;  1BE7 A;  3QWZ A;  1EH1 A;  1FDO A;  5C4X L;  4BBS L;  4NOH A;  1ZYR D;  4LMO A;  1CAD A;  3X2N A;  2B9S B;  2KN9 A;  3HOU L;  1FDI A;  5DM7 1;  4H3T A;  3GTM A;  2X0O A;  3H97 A;  3HU3 A;  1SMY D;  4A3B L;  5EPP A;  1TWH A;  2A6E D;  2AQL A;  3GTK A;  2PVX A;  3KYU A;  4AHZ A;  2R7Z L;  5JSN B;  1NH3 A;  1RYT A;  2PJJ A;  2J9U B;  1JYB A;  1K83 L;  2KQA A;  1E8J A;  4JS7 A;  4KLN A;  4AVR A;  1DX8 A;  2V0E A;  3X2P A;  2VPW A;  2ERS A;  4CRY G;  4AI3 A;  4ZN1 B;  3B08 B;  3M3G A;  4CEH A;  4B8C D;  5FLM L;  1VZG A;  1NXG A;  2G6G A;  4XXB B;  1K4T A;  3D30 A;  3K7A L;  3QQ8 A;  1FHH A;  1OWC A;  3PWF A;  4A3D L;  3HKZ A;  1B2O A;  3GTP A;  3IR6 A;  3TM7 B;  1WQF A;  1PQF A;  3GTQ A;  2XJQ A;  3KYX A;  1A36 A;  2NVX L;  4BAA A;  1YUZ A;  4A3I L;  1SMM A;  5MFP A;  2AYJ A;  5GLY A;  3K58 A;  3X2K A;  1Y1W L;  3CQZ A;  1S2Z A;  1H0H A;  1R9T A;  3TIW A;  2XJU A;  4C2M A;  3RYG A;  3LR8 A;  2WAQ A;  3ZG6 A;  1E32 A;  1KQF A;  2XJR A;  4C5S A;  1T9P A;  2MQA A;  4CS0 A;  2VL6 A;  2Y0S A;  3GTG A;  2YUJ A;  1WCM A;  2M6O A;  4C3J L;  2E2J L;  2E2I A;  4G6B A;  2JIP A;  1C09 A;  3GTO A;  5FTJ A;  5IY0 A;  2WB1 A;  2B63 L;  3JR7 A;  2AUS B;  1TWC A;  2CKA A;  1G8K A;  1VCX A;  4EJ3 A;  1T6P A;  1Y1V A;  3DU6 A;  2AE0 X;  4AN8 A;  4LHL A;  3LNL A;  1LKP A;  4KC6 A;  4KOD A;  3S1Q L;  4ENG A;  2Y0N A;  3NFP I;  5GLF A;  1LPQ A;  3S1N L;  3MPS A;  2JA7 A;  4AON B;  4CEI A;  1I3Q L;  5EIN C;  3S1R L;  4AOK B;  1EZA A;  4AAY A;  3P8B A;  2VPX A;  2PPT A;  2VUM L;  1BW3 A;  4QIW A;  5C3E L;  1BRF A;  3H9C A;  2PVE A;  3S2H L;  3PO2 L;  3B0A B;  2BH0 A;  5AI3 A;  4JCW A;  2H12 A;  3PKJ A;  1TWF L;  5GAD c;  1YLE A;  1ODH A;  3QC8 A;  1BW4 A;  2N3E A;  4A3F L;  1CZ5 A;  4AHY A;  2R92 A;  5M3M L;  3PLX B;  1SEU A;  2FIP A;  2JI2 A;  1L8F A;  1PYU B;  4TPU A;  2R93 L;  3X2O A;  4C5R A;  4L8I A;  4JAF A;  2DSX A;  1R0G A;  4WFN 1;  1Y5I A;  2DMR A;  2JA6 A;  1KQG A;  2G5D A;  4JAE A;  3OUG A;  1ISE A;  1RDV A;  3A44 A;  5AI2 A;  3U4Q A;  3LWV B;  5MLC 9;  2M4Y A;  2MS3 A;  2PYA A;  4AYB P;  2EZB A;  3WVO A;  2Z3Q B;  1OWB A;  3VPB E;  4NOL A;  1RDG A;  2NVY L;  1V9M A;  4POF A;  3PL5 A;  4L48 A;  4UY8 1;  2LTH A;  4D3Y A;  3WWN B;  2FIO A;  3IR7 A;  1VZI A;  2NVQ L;  2K3N A;  1T9Q A;  5IP9 L;  2PI8 A;  2LPI A;  4XGH A;  2V0F A;  7RXN A;  1DMS A;  3QQC E;  1R9T L;  1B13 A;  1RR8 C;  4V2R A;  4CEJ A;  4A3M L;  3HOW L;  1TWG L;  1EJ9 A;  2PMZ A;  2APO B;  5FJ8 L;  4RV0 A;  3IAY A;  5MLC 3;  3FKI A;  3GTJ A;  3LRD A;  2A68 D;  3K5O A;  3RZ6 A;  1WCM L;  5T5M D;  2EZC A;  3LR2 A;  4YWM A;  4CQ5 A;  2E2I L;  4FBS A;  3GTO L;  3J7Z 1;  5FTL A;  1PT0 A;  5MF6 A;  1I6H L;  2YU9 L;  3RZT A;  2F4Q A;  3ENG A;  1R49 A;  1Y1V L;  5DM6 1;  4KAW X;  1H7V A;  5IZ2 A;  4Q5V A;  3H0G A;  2M6P A;  1T9O A;  1OGY A;  1DMR A;  3J7Y 1;  5C9H A;  2QL0 A;  3K59 A;  3S2D L;  1PQH A;  4A3L L;  1LKM A;  4AI0 A;  2ENG A;  3X2I A;  1IU6 A;  3KYY A;  1PFV A;  3MSU A;  2JI1 A;  2RFK B;  2GMG A;  3LWR B;  1PFU A;  1G8J A;  2K2D A;  3IU3 I;  1BFY A;  1IW7 D;  4A3E L;  2JA5 L;  8RXN A;  4Y52 L;  5GAE c;  1R0F A;  3IR5 A;  3S16 L;  2EZA A;  1Z92 B;  5DYI A;  2R7Z A;  3KYW A;  3M4O L;  1I50 L;  5H4U A;  5JVH 1;  3H9B A;  3HOV L;  1PT1 A;  1K83 A;  4NOK A;  1PZX A;  2X0P A;  1T8I A;  3PO3 L;  1HQM D;  4JLR C;  4AHW A;  1DD5 A;  1PYQ A;  1TWA L;  1TMO A;  2JIM A;  1SMW A;  3HU2 A;  1LTL A;  5IYB L;  3I4M L;  5FTM A;  1BQ8 A;  5MGN A;  1SIW A;  1DVB A;  1QDN A;  3GTL L;  1NNQ A;  4Q5G A;  2LYI A;  4FER A;  1CAA A;  1MIU A;  5C18 A;  1WQH A;  1Q8I A;  2CW0 D;  3SUM A;  1RB9 A;  4C2M 1;  1R7R A;  3HU1 A;  2NAP A;  5H1S c;  3X2M A;  2PJH B;  1SFO A;  1Y2M A;  2PSM C;  1HD5 A;  4KB2 A;  4A3G L;  1E18 A;  1Y1W A;  4FXD A;  3GTM L;  1Y4Z A;  2C45 A;  2EY4 E;  2E7Z A;  4IP8 A;  2NVT L;  2VPY A;  1TWH L;  4IP9 A;  3GTK L;  2C6A A;  2V45 A;  1W27 A;  3S14 L;  4K9F A;  4YWL A;  2JI3 A;  1OA7 A;  2XJV A;  3QQ7 A;  3LWQ B;  2GAE A;  2M4V A;  1QCV A;  4A3C L;  4C3I L;  2F5J A;  3WWL A;  3O5A A;  5GM9 A;  2NYA A;  1Y69 8;  2XJT A;  4D3Z A;  3P2A A;  5GAH c;  2B63 A;  4C6G A;  1H5N A;  4AI1 A;  1R27 A;  1RWD A;  4AHX A;  1R0J A;  3LWO B;  1R0I A;  4OYD B;  1YNN D;  4FGU A;  1TL8 A;  1S3S A;  2VK9 A;  4NOM A;  4AR5 A;  3PIP 1;  1PQE A;  4KO8 A;  3KYL A;  3GTP L;  2PIC A;  3EZE A;  5FTK A;  2NYD A;  5K2M E;  1YK4 A;  3GTQ L;  1IRO A;  6RXN A;  2E2H A;  3H0G L;  5CQG A;  2LCQ A;  1F4L A;  5M3F L;  3SUJ A;  4AZD A;  4GS7 D;  5M5X L;  3S1M L;  3HJW B;  1ZRP A;  1I3Q A;  5IYC L;  2BE5 D;  3CQZ L;  5C4J L;  3SUK A;  5RXN A;  1S24 A;  2VUM A;  3EZA A;  1B71 A;  4TVM A;  5IYD L;  3S17 L;  2LKM B;  4JAG A;  1WC2 A;  5FTN A;  1A35 A;  1S30 A;  2MX9 A;  2XJS A;  1RYQ A;  4ZN3 B;  3CZB A;  2HRO A;  1E5V A;  3HOZ L;  1BQ9 A;  4A3K L;  1TWF A;  3GTG L;  1PPY A;  4O26 A;  1K4S A;  4A93 L;  4X6A L;  3S15 L;  3HKZ P;  1N10 A;  3K5M A;  3CF2 A;  1RRJ A;  4BY7 L;  4AYB A;  1WQG A;  2Z3R B;  4QCL A;  4KDD A;  3QVD A;  4DMR A;  3U44 A;  4FFT A;  3K5N A;  2ERJ A;  5IP7 L;  1TWC L;  1I6V D;  3MAQ A;  5M5Y L;  2R93 A;  3X2H A;  1ZYM A;  3RZD L;  2VPZ A;  1AA6 A;  3FDJ A;  3PZA A;  1ZC1 A;  2K3Q A;  3LHP S;  1T6J A;  2WAQ P;  4C5U A;  1YUX A;  1E60 A;  4AHC A;  2KKD A;  2XJP A;  2Y0S P;  2A69 D;  3X2L A;  2JA7 L;  4LHN A;  4KDI A;  1PFY A;  4JJO A;  5MFZ A;  2V3B B;  1QQT A;  2K3O A;  3SUL A;  3MQK B;  1R5Z A;  2JIR A;  3X2J A;  4KDL A;  2L0Z A;  2N1D B;  3K57 A;  5DYG A;  4AR6 A;  2JIQ A;  2WB1 P;  2NVY A;  1UHE A;  4BBR L;  1CZ4 A;  4C3H L;  4A3J L;  4JP6 A;  3HAX C;  5B6C A;  1UHD A;  1SFO L;  1YNJ D;  3NZ4 A;  1B2J A;  2HCZ X;  4F3E A;  3K5L A;  2R92 L;  4ZM7 A;  2C6B A;  3I4N L;  1VC3 B;  1TWG A;  3K35 A;  1SMU A;  3M3Y L;  5GLX A;  5C1B A;  3EZB A;  3LR6 A;  1P7P A;  3PIO 1;  4GA6 A;  1QCS A;  3DMR A;  5AN9 H;  2PNW A;  2EEO B;  2CKC A;  2V3V A;  2HR5 A;  4V2Q A;  3HOY L;  2ZIX A;  4QIW P;  4Y7N L;  1IS1 A;  2JA8 L;  2JA6 L;  4FYD A;  2B5I D;  1TGO A;  2YU9 A;  4RXN A;  4FG4 A;  2O5J D;  3HOX L;  1A31 A;  4U67 1;  2NVX A;  4BY1 L;  4E6Y A;  3RZO L;  1IU5 A;  1OA9 A;  4ME3 A;  5T5I D;  3P9A A;  1IRN A;  3SJR A;  3HJY B;  1WLF A;  2CR8 A;  4JAD A;  3SS2 A;  2E2H L;  4D7Z B;  3PKI A;  1LKO A;  2IV2 X;  4JP7 A;  4FG2 A;  5C44 L;  4AI2 A;  4V19 6;  4BXX L;  4AR4 A;  2MP0 A;  3X2G A;  1R0H A;  5M5W L;  1CR5 A;  1YK5 A;  4KB4 A;  2JA5 A;  5JVG 1; 
#chains in the Genus database with same CATH homology
 1GE9 A;  2KI8 A;  3DU5 A;  1AW8 B;  1E61 A;  1I50 A;  2R4G A;  3LF9 A;  1FHM A;  2JIO A;  3LPE B;  3M4A A;  4GA5 A;  5JSB B;  2X0Q A;  4POG A;  5EIO C;  4CRZ A;  2LPJ A;  5GAG c;  1TWA A;  2RDV A;  1EU1 A;  1SC7 A;  2A6H D;  2MX8 A;  1VZH A;  1YV1 A;  1EK8 A;  1WJV A;  3ML1 A;  1QYB A;  1Q16 A;  4AR3 A;  4GFQ A;  1NXE A;  3GTL A;  3KYV A;  1BE7 A;  3QWZ A;  1EH1 A;  1FDO A;  4NOH A;  1ZYR D;  4LMO A;  1CAD A;  2B9S B;  2KN9 A;  1FDI A;  5DM7 1;  4H3T A;  3GTM A;  2X0O A;  3HU3 A;  1SMY D;  5EPP A;  1TWH A;  2A6E D;  2AQL A;  3GTK A;  2PVX A;  3KYU A;  4AHZ A;  5JSN B;  1NH3 A;  1RYT A;  2PJJ A;  2J9U B;  1JYB A;  1E8J A;  4KLN A;  1DX8 A;  2V0E A;  2VPW A;  2ERS A;  4CRY G;  4AI3 A;  4ZN1 B;  3B08 B;  4CEH A;  4B8C D;  1VZG A;  1NXG A;  2G6G A;  4XXB B;  1K4T A;  3QQ8 A;  1FHH A;  1OWC A;  3PWF A;  3HKZ A;  1B2O A;  3GTP A;  3IR6 A;  3TM7 B;  1WQF A;  1PQF A;  3GTQ A;  2XJQ A;  3KYX A;  1A36 A;  1YUZ A;  1SMM A;  5MFP A;  2AYJ A;  3K58 A;  3CQZ A;  1S2Z A;  1H0H A;  1R9T A;  3TIW A;  2XJU A;  4C2M A;  3RYG A;  3LR8 A;  2WAQ A;  3ZG6 A;  1E32 A;  1KQF A;  2XJR A;  1T9P A;  2MQA A;  4CS0 A;  2VL6 A;  2Y0S A;  3GTG A;  2YUJ A;  1WCM A;  2M6O A;  2E2I A;  4G6B A;  2JIP A;  1C09 A;  3GTO A;  5FTJ A;  5IY0 A;  2WB1 A;  1TWC A;  2CKA A;  1G8K A;  1VCX A;  4EJ3 A;  2AE0 X;  1Y1V A;  3DU6 A;  4AN8 A;  4LHL A;  3LNL A;  1LKP A;  4KC6 A;  4KOD A;  2Y0N A;  3NFP I;  5GLF A;  1LPQ A;  3MPS A;  2JA7 A;  4AON B;  4CEI A;  5EIN C;  4AOK B;  4AAY A;  3P8B A;  2VPX A;  2PPT A;  4QIW A;  1BRF A;  2PVE A;  3B0A B;  5AI3 A;  2H12 A;  3PKJ A;  5GAD c;  1YLE A;  1ODH A;  3QC8 A;  2N3E A;  1CZ5 A;  4AHY A;  2R92 A;  3PLX B;  1SEU A;  2FIP A;  2JI2 A;  1PYU B;  4TPU A;  4L8I A;  4JAF A;  2DSX A;  1R0G A;  4WFN 1;  1Y5I A;  2DMR A;  2JA6 A;  1KQG A;  2G5D A;  4JAE A;  3OUG A;  1ISE A;  1RDV A;  3A44 A;  5AI2 A;  3U4Q A;  5MLC 9;  2M4Y A;  2MS3 A;  2PYA A;  3WVO A;  2Z3Q B;  1OWB A;  3VPB E;  4NOL A;  1RDG A;  1V9M A;  4POF A;  4UY8 1;  2LTH A;  4D3Y A;  3WWN B;  2FIO A;  3IR7 A;  1VZI A;  2K3N A;  1T9Q A;  2PI8 A;  2LPI A;  4XGH A;  2V0F A;  7RXN A;  1DMS A;  3QQC E;  1B13 A;  1RR8 C;  4CEJ A;  1EJ9 A;  2PMZ A;  4RV0 A;  3IAY A;  5MLC 3;  3FKI A;  3GTJ A;  3LRD A;  2A68 D;  3K5O A;  3RZ6 A;  5T5M D;  3LR2 A;  4YWM A;  4FBS A;  3J7Z 1;  5FTL A;  1PT0 A;  5MF6 A;  3RZT A;  2F4Q A;  1R49 A;  5DM6 1;  4KAW X;  1H7V A;  5IZ2 A;  4Q5V A;  3H0G A;  2M6P A;  1T9O A;  1OGY A;  1DMR A;  3J7Y 1;  5C9H A;  2QL0 A;  3K59 A;  1PQH A;  1LKM A;  4AI0 A;  1IU6 A;  3KYY A;  3MSU A;  2JI1 A;  2GMG A;  1G8J A;  2K2D A;  3IU3 I;  1BFY A;  1IW7 D;  8RXN A;  5GAE c;  1R0F A;  3IR5 A;  1Z92 B;  5DYI A;  2R7Z A;  3KYW A;  5JVH 1;  1PT1 A;  1K83 A;  4NOK A;  2X0P A;  1T8I A;  1HQM D;  4JLR C;  4AHW A;  1DD5 A;  1PYQ A;  1TMO A;  2JIM A;  1SMW A;  3HU2 A;  1LTL A;  5FTM A;  1BQ8 A;  5MGN A;  1SIW A;  1DVB A;  1QDN A;  1NNQ A;  4Q5G A;  2LYI A;  1CAA A;  1MIU A;  5C18 A;  1WQH A;  1Q8I A;  2CW0 D;  1RB9 A;  1R7R A;  3HU1 A;  2NAP A;  5H1S c;  2PJH B;  1SFO A;  2PSM C;  4KB2 A;  1E18 A;  1Y1W A;  4FXD A;  1Y4Z A;  2C45 A;  2E7Z A;  4IP8 A;  2VPY A;  4IP9 A;  2V45 A;  2C6A A;  4K9F A;  4YWL A;  2JI3 A;  2XJV A;  3QQ7 A;  2GAE A;  2M4V A;  1QCV A;  2F5J A;  3WWL A;  3O5A A;  2NYA A;  1Y69 8;  2XJT A;  4D3Z A;  3P2A A;  5GAH c;  2B63 A;  1H5N A;  1R27 A;  4AI1 A;  1RWD A;  4AHX A;  1R0J A;  1R0I A;  4OYD B;  1YNN D;  4FGU A;  1TL8 A;  1S3S A;  2VK9 A;  4NOM A;  4AR5 A;  3PIP 1;  1PQE A;  4KO8 A;  3KYL A;  2PIC A;  5FTK A;  2NYD A;  5K2M E;  1YK4 A;  1IRO A;  6RXN A;  2E2H A;  5CQG A;  2LCQ A;  4AZD A;  4GS7 D;  1ZRP A;  1I3Q A;  2BE5 D;  5RXN A;  1S24 A;  2VUM A;  1B71 A;  4TVM A;  2LKM B;  4JAG A;  5FTN A;  1A35 A;  1S30 A;  2MX9 A;  2XJS A;  1RYQ A;  4ZN3 B;  3CZB A;  1E5V A;  1BQ9 A;  1TWF A;  1PPY A;  4O26 A;  1K4S A;  3CF2 A;  3K5M A;  1RRJ A;  4AYB A;  1WQG A;  2Z3R B;  4QCL A;  4KDD A;  3QVD A;  4DMR A;  3U44 A;  3K5N A;  2ERJ A;  1I6V D;  3MAQ A;  2R93 A;  2VPZ A;  1AA6 A;  3PZA A;  1ZC1 A;  2K3Q A;  3LHP S;  1YUX A;  1E60 A;  4AHC A;  2KKD A;  2XJP A;  2A69 D;  4LHN A;  4KDI A;  5MFZ A;  2V3B B;  2K3O A;  1R5Z A;  2JIR A;  4KDL A;  2L0Z A;  2N1D B;  3K57 A;  5DYG A;  4AR6 A;  2JIQ A;  2NVY A;  1UHE A;  1CZ4 A;  5B6C A;  1UHD A;  1YNJ D;  1B2J A;  4F3E A;  3K5L A;  2C6B A;  1VC3 B;  1TWG A;  3K35 A;  1SMU A;  5C1B A;  3LR6 A;  3PIO 1;  4GA6 A;  1QCS A;  3DMR A;  5AN9 H;  2PNW A;  2EEO B;  2CKC A;  2V3V A;  2HR5 A;  2ZIX A;  1IS1 A;  4FYD A;  2B5I D;  1TGO A;  2YU9 A;  4RXN A;  2O5J D;  1A31 A;  4U67 1;  2NVX A;  4E6Y A;  1IU5 A;  4ME3 A;  5T5I D;  3P9A A;  1IRN A;  3SJR A;  1WLF A;  2CR8 A;  4JAD A;  3SS2 A;  4D7Z B;  3PKI A;  1LKO A;  2IV2 X;  4AI2 A;  4V19 6;  4AR4 A;  1R0H A;  1CR5 A;  1YK5 A;  4KB4 A;  2JA5 A;  5JVG 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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