1I6H | Genus

Total Genus 51

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	51
sequence length	266
structure length	266
Chain Sequence	EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__378238830394722__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__378238830394722__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/1I6H/C/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__378238830394722__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"378238830394722","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/1I6H/C/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__378238830394722__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5d2683914615d528455ed2c9/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5d2683914615d528455ed2c9/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5d2683914615d528455ed2c9/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5d2683914615d528455ed2c9/pdb.gz): 216 ms

reading 266 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

266 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 25 ms

Adding embedded #jmolscript: select ({0:265});backbone only;select *;

platformSpeed = 8

cartoonsFancy = true

sheetSmoothing = 1.0

traceAlpha = true

loadScript /static/js/j2s/core/corescriptcmd.z.js

specularPower = 9

ambientPercent = 20

antialiasDisplay = true

Script completed

Jmol script terminated

loadScript /static/js/j2s/J/g3d/HermiteRenderer.js

loadScript /static/js/j2s/J/renderbio/BioMeshRenderer.js

loadScript /static/js/j2s/J/render/MeshRenderer.js

loadScript /static/js/j2s/J/shape/Mesh.js

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription/dna-rna hybrid
source organism	Saccharomyces cerevisiae
publication title	Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution. pubmed doi rcsb
molecule keywords	5'-D(PAPAPAPTPGPCPCPTPGPGPTPCP*T)-3'
total genus	51
structure length	266
sequence length	266
ec nomenclature
pdb deposition date	2001-03-02

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
C	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
C	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	1i6hC01
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	1i6hC02

2R93C 2VUMK 4BY7C 2JA7C 3I4NC 3DXJA 2A6EA 4BXXC 5IYBC 4LJZA 2WB1L 3S1NC 3GTQK 4QIWL 2WB1D 3GTPC 4MEYA 4Q5SA 3RZOK 1I50C 1YNJA 4OINA 3S1RK 2A68A 3S17C 3EQLA 2YU9K 3HOVK 4C3IC 4Y52C 4C3JK 4A3MK 3GTOC 4AYBD 2PA8L 1SFOK 3H3VL 4A3BC 2PA8D 3H3VD 3RZDK 2E2JC 1TWGC 2B63C 5C4XK 4BBSK 3CQZC 4YFNA 5IYCC 1HQMA 4QJVB 1R9TK 3GTKC 2PPBA 3S2DK 4A93C 4XLPA 5FLMK 3HKZL 5C4JC 4YFXA 4A3DC 5IP7C 3GTLC 4GZYA 5C44K 3GTMK 3HOXK 3M3YK 3PO3K 4C2MK 4YG2A 2E2HK 3S2HC 3S14C 2R7ZK 4XSXA 1WCMC 4YFKA 5D4DA 4Y7NC 4A3KC 3H0GK 4A3FK 2PMZD 4BBRK 1BDFA 3FKIC 5FJ8K 4A3JK 3HOZC 3S16K 1Y1WK 3S1QK 4C3HK 1I6VA 1TWCK 2JA5K 2R93K 3K7AC 4KMUA 4BY1C 4BY7K 4JK1A 3GTJC 3I4NK 4BXXK 5TMFA 2WAQD 5IYDC 5IYBK 5M3FK 1SMYA 4A3EC 3S1NK 3S1MC 4OIQA 1TWHC 4NOIA 1TWAK 1TWFC 3GTPK 4AYBL 2NVTC 1I50K 4QJVA 1Y1VC 3S17K 4Y52K 4XLNA 3HOWC 4A3LC 5M3MK 2O5IA 4LLGA 3GTOK 4A3BK 4X6AC 2E2JK 1TWGK 2B63K 2JA6C 3I4MC 4A3CC 3CQZK 4XSZA 2Y0SD 5IYCK 2NVYC 1ZYRA 2NVXK 3GTKK 2NVQC 2YU9C 5C4JK 2PMZL 5C3EK 4A3DK 5IP7K 3GTLK 3HOYC 2JA8C 4Q4ZA 4A3GC 1I3QC 3S15C 4G7ZA 2E2IK 3S2HK 3S14K 2BE5A 3M4OK 1WCMK 5IP9C 4A3KK 1R9TC 4KN4A 3FKIK 2JA7K 2WAQL 4G7OA 2R92C 1K83C 3PO2C 4ZH4A 1I6HC 4OIRA 4A3IC 4KN7A 3HOUC 4BY1K 4OIOA 3GTGC 1IW7A 5IYDK 4A3FC 2VUMC 1XPPA 4A3EK 4C3IK 2CW0A 1TWFK 5M5YK 2NVTK 3GTQC 1Y1VK 2Y0SL 3RZOC 3HOWK 3S1RC 4A3LK 4LK1A 4A93K 3HOVC 4QIWD 4C3JC 1TWAC 4X6AK 2JA6K 4A3MC 3I4MK 4MEXA 4A3CK 1SFOC 2NVYK 3WODA 4OIPA 3RZDC 2O5JA 2NVQK 5C4XC 2A6HA 4G7HA 4BBSC 4Y7NK 3S2DC 3HOYK 5M5XK 2JA8K 2A69A 5FLMC 4A3GK 1I3QK 3HOZK 3S15K 4MQ9A 5C44C 3M3YC 3GTMC 3PO3C 3HOXC 5IP9K 1YNNA 5TMCA 4C2MC 4LK0A 2E2HC 2NVXC 3K7AK 3GTJK 2R7ZC 3HKZD 5C3EC 3H0GC 1K83K 2R92K 3PO2K 4BBRC 4A3JC 3S16C 3S1MK 1I6HK 1TWHK 1Y1WC 3S1QC 4A3IK 4C3HC 3HOUK 2E2IC 3M4OC 3GTGK 5M5WK 1TWCC 2JA5C
chains in the Genus database with same CATH superfamily

3BUEA 1USMA 2JA6A 4LJZA 2WB1D 4OINA 1I3QA 4BLAA 4C3IC 4GTFA 4A3MK 4WJ4A 1F7UA 4BBSK 4QJVB 5IYCC 1HQMA 1YX2A 4XLPA 3HKZL 1EQRA 4YFXA 3GTGA 3GTLC 3GTMK 3PO3K 2P5MA 4KM9A 4XSXA 5D4DA 4YFKA 4Y7NC 1EK8A 4WFNS 1O29A 1WSRA 1O2BA 3FKIC 1XXBA 3S1QK 4KMDA 1EI6A 3N0BA 4BY7K 3I4NK 4BXXK 1B4BA 5IYBK 1SMYA 1SFOA 3S1NK 3S1MC 4OIQA 3GTPK 4WFAS 2NVTC 1I50K 2L5NA 4A3LC 2E2HA 2NVXA 4A3BK 4X6AC 3SZYA 4A3CC 3BP3A 3CAGA 2NVXK 1C0AA 1J6WA 2YU9C 5C4JK 4FZBA 1BJTA 5C3EK 3LYWA 3T02A 3V4GA 2JA5A 4LQYA 4BKWA 4DDQA 4KN4A 1IQ0A 1O28A 4KDDA 1K83C 3PO2C 4ZH4A 4A3IC 4BY1K 3QX3A 3GTOA 3A8KA 4A3EK 1TWGA 2B63A 3SZZA 3NUHA 3GTQC 4G0WA 2PHCB 3G4AA 1O2AA 1F7VA 3RZOC 3ADAC 3HOWK 2GSUA 1TWAC 3AQPA 3I4MK 2NVYK 3AD7C 4OIPA 4ILDA 5C4XC 3AQOA 5M5XK 3HOZK 5C44C 3M3YC 3HOXC 1YNNA 4C2MC 4LK0A 3K7AK 1PJ5A 3H0GC 4BBRC 4A3JC 1I6HK 1Y1WC 2R93C 2VUMK 2JA7C 5TJ3A 3L4KA 5HQHA 3LPXA 2KXYA 4WILA 1B4AA 4KM8A 3TFIA 4Q5SA 1YNJA 4P9SA 2A68A 3S17C 2L3UA 4KB4A 3HOVK 1XXAA 3TFHA 1R9TA 4WFBS 5IOTA 3H3VL 2ZFZA 3RZDK 2Y3PA 2E2JC 3CQZC 3GEHA 1WQFA 1VGXA 1R9TK 1VJEA 3GTKC 5FLMK 3GIRA 2R7ZA 5IP7C 4RMFA 4YG2A 2XCRB 1FEUA 2R7ZK 4PAAA 1WCMC 4A3KC 4A3FK 3AD8C 1HI9A 3L4JA 4C3HK 1AB4A 2W7VA 1ZBSA 3GDZA 4U67S 1PJ7A 1TWCK 1WSVA 3GTJC 4GTCA 1ZQ1C 2D6FC 1TWHC 1TWFC 4QJVA 4G0UA 1RU0A 4WF9S 3GTMA 1INNA 5M3MK 2O5IA 4GTLA 3ERED 2JA6C 5EGEA 5IYCK 1WQHA 2NVQC 3GTLK 2JA8C 3Q3QA 4A3GC 1I3QC 3S15C 3M4OK 2BE5A 2GSNA 3FKIK 3GTPA 2R92C 1I50A 5DM6S 4KARA 4OIRA 4OIOA 2V6SA 3GTGC 1XPPA 4KMHA 3VA7A 2CW0A 5M5YK 4GFQA 2NVTK 2JH3A 2KWAA 4IO9S 4A3LK 3S1RC 4A93K 4BLBA 3CF5S 1JVIA 4QIWD 4C3JC 4X6AK 5JVOA 4A3CK 5IOSA 1SFOC 2RGRA 3WODA 2A6HA 3S2DC 2A69A 2V6UA 1WORA 4P5AA 3AH5A 5TMCA 1DCHA 2E2HC 2NVXC 5C3EC 1K83K 3PO2K 3S16C 2GSOA 1USOA 4A3IK 4KB2A 2GAHC 3N0CA 2JA5C 2A6EA 2ZJRS 4AH6A 4GTDA 1G51A 2NVYA 4QIWL 3GTQK 2KQ1A 3RZOK 1WQGA 1IBAA 3EQLA 4Y52C 4C45A 1J6VA 1DCPA 3DLLS 3GTOC 2PA8L 2V6TA 3H3VD 1TWGC 2B63C 1IE0A 5C4XK 1O26A 1WOPA 1XZQA 3PIOS 1XZQB 4A3DC 5C44K 5E68A 3M3YK 5CHPA 3HOXK 2VUMA 4C2MK 1O25A 3S2HC 3S14C 4LOWA 3H0GK 4BBRK 4A3JK 3HOZC 1O2FB 1Y1WK 4GTAA 1I6VA 2R93K 3K7AC 2ZJPS 4JK1A 3LAJA 1WIHA 5TMFA 5IYDC 5M3FK 1PJ6A 1KQ4A 4NOIA 3TFJA 1XZPA 1Y1VC 1XZPB 3S17K 4WJ3M 3OPFA 4LLGA 2E2JK 3GEIA 3CQZK 4XSZA 2Y0SD 3IPJA 1ZYRA 3GTKK 1BS2A 2E2IA 3BP8C 5IP7K 3HOYC 4Q4ZA 5JVHS 1TWCA 3AD9C 1XXCA 2E2IK 3OEPA 5EGHA 1WCMK 5IP9C 4A3KK 1R9TC 5IOQA 4G7OA 1WOOA 3S0XA 2ZJQS 3HOUC 3HXAA 1IW7A 1V5VA 4A3FC 1X31C 3FOFA 1ZVUA 4C3IK 1TWFK 4XCHA 2Y0SL 3GTLA 1DD5A 2JA6K 4A3MC 1VH2A 4MEXA 3FKIA 1JQWA 3T00A 2NVQK 5JVGS 4Y7NK 4G7HA 4BBSC 3GEEA 1IL2A 5IORA 4O2DA 2JA8K 1VRQC 1I3QK 3S15K 4A3GK 1JOEA 4MQ9A 3GTMC 3PO3C 3N3YA 3G4CA 2R92A 2R92K 2FQTA 3S1MK 3S1QC 1J98A 2CFAA 3M4OC 5JFEA 3GTGK 1GE9A 1O27A 2CFAB 4BY7C 3TTGA 3I4NC 1EFWA 3DXJA 4BXXC 2RH6A 3MMLB 5IYBC 3FHZA 2WB1L 3S1NC 3A8JA 3GTPC 2YU9A 4MEYA 1I50C 3S1RK 2YU9K 4FM9A 4C3JK 4IOCS 4GT9A 4AYBD 1SFOK 2KPUA 4A3BC 2PA8D 4IOAS 1O24A 4KASA 1K83A 4YFNA 3S2DK 5HL8A 2PPBA 4A93C 4J3NA 5C4JC 4GZYA 1F93A 4LR2A 3JSTA 2E2HK 5DM7S 3GTQA 2PMZD 5FJ8K 1BDFA 3S16K 1VLOA 2ZUFA 2GAGC 3A8IA 1F9NA 2JA5K 4BY1C 4KMUA 2P8TA 1TWAA 2WAQD 4KAWX 4KC6A 4A3EC 2XCOA 1TWAK 4AYBL 4Y52K 4XLNA 3HOWC 3GTOK 4G0VA 1TWGK 2B63K 3I4MC 3H0GA 2NVYC 1ISEA 1Y1WA 4WCES 4P5BA 1L0WA 2PMZL 4A3DK 1IS1A 4GTEA 2R93A 3GSIA 4G7ZA 2JA7A 5L46A 3S2HK 3S14K 2XCQA 2JA7K 2WAQL 3T01A 2EBBA 4KMAA 1I6HC 4KN7A 1DCOA 4KATA 4GTBA 3FOEA 5IYDK 2VUMC 1WOSA 1Y1VA 5HL7S 3CQZA 1ZXOA 3GTKA 1J6XA 1UV7A 1Y1VK 4LK1A 2FQOA 3HOVC 1WCMA 3RZDC 2O5JA 5CJ9A 3PIPS 3HOYK 5FLMC 4M1XA 3OREA 1BGWA 3GTJA 1EH1A 5IP9K 3GTJK 2R7ZC 1TWHA 4PABA 1TWFA 3HKZD 3LAPA 1YCLA 1TWHK 3HOUK 4C3HC 2E2IC 5M5WK 2ZUEA 1TWCC
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 2R93 C;  2VUM K;  4BY7 C;  2JA7 C;  3I4N C;  3DXJ A;  2A6E A;  4BXX C;  5IYB C;  4LJZ A;  2WB1 L;  3S1N C;  3GTQ K;  4QIW L;  2WB1 D;  3GTP C;  4MEY A;  4Q5S A;  3RZO K;  1I50 C;  1YNJ A;  4OIN A;  3S1R K;  2A68 A;  3S17 C;  3EQL A;  2YU9 K;  3HOV K;  4C3I C;  4Y52 C;  4C3J K;  4A3M K;  3GTO C;  4AYB D;  2PA8 L;  1SFO K;  3H3V L;  4A3B C;  2PA8 D;  3H3V D;  3RZD K;  2E2J C;  1TWG C;  2B63 C;  5C4X K;  4BBS K;  3CQZ C;  4YFN A;  5IYC C;  1HQM A;  4QJV B;  1R9T K;  3GTK C;  2PPB A;  3S2D K;  4A93 C;  4XLP A;  5FLM K;  3HKZ L;  5C4J C;  4YFX A;  4A3D C;  5IP7 C;  3GTL C;  4GZY A;  5C44 K;  3GTM K;  3HOX K;  3M3Y K;  3PO3 K;  4C2M K;  4YG2 A;  2E2H K;  3S2H C;  3S14 C;  2R7Z K;  4XSX A;  1WCM C;  4YFK A;  5D4D A;  4Y7N C;  4A3K C;  3H0G K;  4A3F K;  2PMZ D;  4BBR K;  1BDF A;  3FKI C;  5FJ8 K;  4A3J K;  3HOZ C;  3S16 K;  1Y1W K;  3S1Q K;  4C3H K;  1I6V A;  1TWC K;  2JA5 K;  2R93 K;  3K7A C;  4KMU A;  4BY1 C;  4BY7 K;  4JK1 A;  3GTJ C;  3I4N K;  4BXX K;  5TMF A;  2WAQ D;  5IYD C;  5IYB K;  5M3F K;  1SMY A;  4A3E C;  3S1N K;  3S1M C;  4OIQ A;  1TWH C;  4NOI A;  1TWA K;  1TWF C;  3GTP K;  4AYB L;  2NVT C;  1I50 K;  4QJV A;  1Y1V C;  3S17 K;  4Y52 K;  4XLN A;  3HOW C;  4A3L C;  5M3M K;  2O5I A;  4LLG A;  3GTO K;  4A3B K;  4X6A C;  2E2J K;  1TWG K;  2B63 K;  2JA6 C;  3I4M C;  4A3C C;  3CQZ K;  4XSZ A;  2Y0S D;  5IYC K;  2NVY C;  1ZYR A;  2NVX K;  3GTK K;  2NVQ C;  2YU9 C;  5C4J K;  2PMZ L;  5C3E K;  4A3D K;  5IP7 K;  3GTL K;  3HOY C;  2JA8 C;  4Q4Z A;  4A3G C;  1I3Q C;  3S15 C;  4G7Z A;  2E2I K;  3S2H K;  3S14 K;  2BE5 A;  3M4O K;  1WCM K;  5IP9 C;  4A3K K;  1R9T C;  4KN4 A;  3FKI K;  2JA7 K;  2WAQ L;  4G7O A;  2R92 C;  1K83 C;  3PO2 C;  4ZH4 A;  1I6H C;  4OIR A;  4A3I C;  4KN7 A;  3HOU C;  4BY1 K;  4OIO A;  3GTG C;  1IW7 A;  5IYD K;  4A3F C;  2VUM C;  1XPP A;  4A3E K;  4C3I K;  2CW0 A;  1TWF K;  5M5Y K;  2NVT K;  3GTQ C;  1Y1V K;  2Y0S L;  3RZO C;  3HOW K;  3S1R C;  4A3L K;  4LK1 A;  4A93 K;  3HOV C;  4QIW D;  4C3J C;  1TWA C;  4X6A K;  2JA6 K;  4A3M C;  3I4M K;  4MEX A;  4A3C K;  1SFO C;  2NVY K;  3WOD A;  4OIP A;  3RZD C;  2O5J A;  2NVQ K;  5C4X C;  2A6H A;  4G7H A;  4BBS C;  4Y7N K;  3S2D C;  3HOY K;  5M5X K;  2JA8 K;  2A69 A;  5FLM C;  4A3G K;  1I3Q K;  3HOZ K;  3S15 K;  4MQ9 A;  5C44 C;  3M3Y C;  3GTM C;  3PO3 C;  3HOX C;  5IP9 K;  1YNN A;  5TMC A;  4C2M C;  4LK0 A;  2E2H C;  2NVX C;  3K7A K;  3GTJ K;  2R7Z C;  3HKZ D;  5C3E C;  3H0G C;  1K83 K;  2R92 K;  3PO2 K;  4BBR C;  4A3J C;  3S16 C;  3S1M K;  1I6H K;  1TWH K;  1Y1W C;  3S1Q C;  4A3I K;  4C3H C;  3HOU K;  2E2I C;  3M4O C;  3GTG K;  5M5W K;  1TWC C;  2JA5 C; 
#chains in the Genus database with same CATH topology
 3BUE A;  1USM A;  2JA6 A;  4LJZ A;  2WB1 D;  4OIN A;  1I3Q A;  4BLA A;  4C3I C;  4GTF A;  4A3M K;  4WJ4 A;  1F7U A;  4BBS K;  4QJV B;  5IYC C;  1HQM A;  1YX2 A;  4XLP A;  3HKZ L;  1EQR A;  4YFX A;  3GTG A;  3GTL C;  3GTM K;  3PO3 K;  2P5M A;  4KM9 A;  4XSX A;  5D4D A;  4YFK A;  4Y7N C;  1EK8 A;  4WFN S;  1O29 A;  1WSR A;  1O2B A;  3FKI C;  1XXB A;  3S1Q K;  4KMD A;  1EI6 A;  3N0B A;  4BY7 K;  3I4N K;  4BXX K;  1B4B A;  5IYB K;  1SMY A;  1SFO A;  3S1N K;  3S1M C;  4OIQ A;  3GTP K;  4WFA S;  2NVT C;  1I50 K;  2L5N A;  4A3L C;  2E2H A;  2NVX A;  4A3B K;  4X6A C;  3SZY A;  4A3C C;  3BP3 A;  3CAG A;  2NVX K;  1C0A A;  1J6W A;  2YU9 C;  5C4J K;  4FZB A;  1BJT A;  5C3E K;  3LYW A;  3T02 A;  3V4G A;  2JA5 A;  4LQY A;  4BKW A;  4DDQ A;  4KN4 A;  1IQ0 A;  1O28 A;  4KDD A;  1K83 C;  3PO2 C;  4ZH4 A;  4A3I C;  4BY1 K;  3QX3 A;  3GTO A;  3A8K A;  4A3E K;  1TWG A;  2B63 A;  3SZZ A;  3NUH A;  3GTQ C;  4G0W A;  2PHC B;  3G4A A;  1O2A A;  1F7V A;  3RZO C;  3ADA C;  3HOW K;  2GSU A;  1TWA C;  3AQP A;  3I4M K;  2NVY K;  3AD7 C;  4OIP A;  4ILD A;  5C4X C;  3AQO A;  5M5X K;  3HOZ K;  5C44 C;  3M3Y C;  3HOX C;  1YNN A;  4C2M C;  4LK0 A;  3K7A K;  1PJ5 A;  3H0G C;  4BBR C;  4A3J C;  1I6H K;  1Y1W C;  2R93 C;  2VUM K;  2JA7 C;  5TJ3 A;  3L4K A;  5HQH A;  3LPX A;  2KXY A;  4WIL A;  1B4A A;  4KM8 A;  3TFI A;  4Q5S A;  1YNJ A;  4P9S A;  2A68 A;  3S17 C;  2L3U A;  4KB4 A;  3HOV K;  1XXA A;  3TFH A;  1R9T A;  4WFB S;  5IOT A;  3H3V L;  2ZFZ A;  3RZD K;  2Y3P A;  2E2J C;  3CQZ C;  3GEH A;  1WQF A;  1VGX A;  1R9T K;  1VJE A;  3GTK C;  5FLM K;  3GIR A;  2R7Z A;  5IP7 C;  4RMF A;  4YG2 A;  2XCR B;  1FEU A;  2R7Z K;  4PAA A;  1WCM C;  4A3K C;  4A3F K;  3AD8 C;  1HI9 A;  3L4J A;  4C3H K;  1AB4 A;  2W7V A;  1ZBS A;  3GDZ A;  4U67 S;  1PJ7 A;  1TWC K;  1WSV A;  3GTJ C;  4GTC A;  1ZQ1 C;  2D6F C;  1TWH C;  1TWF C;  4QJV A;  4G0U A;  1RU0 A;  4WF9 S;  3GTM A;  1INN A;  5M3M K;  2O5I A;  4GTL A;  3ERE D;  2JA6 C;  5EGE A;  5IYC K;  1WQH A;  2NVQ C;  3GTL K;  2JA8 C;  3Q3Q A;  4A3G C;  1I3Q C;  3S15 C;  3M4O K;  2BE5 A;  2GSN A;  3FKI K;  3GTP A;  2R92 C;  1I50 A;  5DM6 S;  4KAR A;  4OIR A;  4OIO A;  2V6S A;  3GTG C;  1XPP A;  4KMH A;  3VA7 A;  2CW0 A;  5M5Y K;  4GFQ A;  2NVT K;  2JH3 A;  2KWA A;  4IO9 S;  4A3L K;  3S1R C;  4A93 K;  4BLB A;  3CF5 S;  1JVI A;  4QIW D;  4C3J C;  4X6A K;  5JVO A;  4A3C K;  5IOS A;  1SFO C;  2RGR A;  3WOD A;  2A6H A;  3S2D C;  2A69 A;  2V6U A;  1WOR A;  4P5A A;  3AH5 A;  5TMC A;  1DCH A;  2E2H C;  2NVX C;  5C3E C;  1K83 K;  3PO2 K;  3S16 C;  2GSO A;  1USO A;  4A3I K;  4KB2 A;  2GAH C;  3N0C A;  2JA5 C;  2A6E A;  2ZJR S;  4AH6 A;  4GTD A;  1G51 A;  2NVY A;  4QIW L;  3GTQ K;  2KQ1 A;  3RZO K;  1WQG A;  1IBA A;  3EQL A;  4Y52 C;  4C45 A;  1J6V A;  1DCP A;  3DLL S;  3GTO C;  2PA8 L;  2V6T A;  3H3V D;  1TWG C;  2B63 C;  1IE0 A;  5C4X K;  1O26 A;  1WOP A;  1XZQ A;  3PIO S;  1XZQ B;  4A3D C;  5C44 K;  5E68 A;  3M3Y K;  5CHP A;  3HOX K;  2VUM A;  4C2M K;  1O25 A;  3S2H C;  3S14 C;  4LOW A;  3H0G K;  4BBR K;  4A3J K;  3HOZ C;  1O2F B;  1Y1W K;  4GTA A;  1I6V A;  2R93 K;  3K7A C;  2ZJP S;  4JK1 A;  3LAJ A;  1WIH A;  5TMF A;  5IYD C;  5M3F K;  1PJ6 A;  1KQ4 A;  4NOI A;  3TFJ A;  1XZP A;  1Y1V C;  1XZP B;  3S17 K;  4WJ3 M;  3OPF A;  4LLG A;  2E2J K;  3GEI A;  3CQZ K;  4XSZ A;  2Y0S D;  3IPJ A;  1ZYR A;  3GTK K;  1BS2 A;  2E2I A;  3BP8 C;  5IP7 K;  3HOY C;  4Q4Z A;  5JVH S;  1TWC A;  3AD9 C;  1XXC A;  2E2I K;  3OEP A;  5EGH A;  1WCM K;  5IP9 C;  4A3K K;  1R9T C;  5IOQ A;  4G7O A;  1WOO A;  3S0X A;  2ZJQ S;  3HOU C;  3HXA A;  1IW7 A;  1V5V A;  4A3F C;  1X31 C;  3FOF A;  1ZVU A;  4C3I K;  1TWF K;  4XCH A;  2Y0S L;  3GTL A;  1DD5 A;  2JA6 K;  4A3M C;  1VH2 A;  4MEX A;  3FKI A;  1JQW A;  3T00 A;  2NVQ K;  5JVG S;  4Y7N K;  4G7H A;  4BBS C;  3GEE A;  1IL2 A;  5IOR A;  4O2D A;  2JA8 K;  1VRQ C;  1I3Q K;  3S15 K;  4A3G K;  1JOE A;  4MQ9 A;  3GTM C;  3PO3 C;  3N3Y A;  3G4C A;  2R92 A;  2R92 K;  2FQT A;  3S1M K;  3S1Q C;  1J98 A;  2CFA A;  3M4O C;  5JFE A;  3GTG K;  1GE9 A;  1O27 A;  2CFA B;  4BY7 C;  3TTG A;  3I4N C;  1EFW A;  3DXJ A;  4BXX C;  2RH6 A;  3MML B;  5IYB C;  3FHZ A;  2WB1 L;  3S1N C;  3A8J A;  3GTP C;  2YU9 A;  4MEY A;  1I50 C;  3S1R K;  2YU9 K;  4FM9 A;  4C3J K;  4IOC S;  4GT9 A;  4AYB D;  1SFO K;  2KPU A;  4A3B C;  2PA8 D;  4IOA S;  1O24 A;  4KAS A;  1K83 A;  4YFN A;  3S2D K;  5HL8 A;  2PPB A;  4A93 C;  4J3N A;  5C4J C;  4GZY A;  1F93 A;  4LR2 A;  3JST A;  2E2H K;  5DM7 S;  3GTQ A;  2PMZ D;  5FJ8 K;  1BDF A;  3S16 K;  1VLO A;  2ZUF A;  2GAG C;  3A8I A;  1F9N A;  2JA5 K;  4BY1 C;  4KMU A;  2P8T A;  1TWA A;  2WAQ D;  4KAW X;  4KC6 A;  4A3E C;  2XCO A;  1TWA K;  4AYB L;  4Y52 K;  4XLN A;  3HOW C;  3GTO K;  4G0V A;  1TWG K;  2B63 K;  3I4M C;  3H0G A;  2NVY C;  1ISE A;  1Y1W A;  4WCE S;  4P5B A;  1L0W A;  2PMZ L;  4A3D K;  1IS1 A;  4GTE A;  2R93 A;  3GSI A;  4G7Z A;  2JA7 A;  5L46 A;  3S2H K;  3S14 K;  2XCQ A;  2JA7 K;  2WAQ L;  3T01 A;  2EBB A;  4KMA A;  1I6H C;  4KN7 A;  1DCO A;  4KAT A;  4GTB A;  3FOE A;  5IYD K;  2VUM C;  1WOS A;  1Y1V A;  5HL7 S;  3CQZ A;  1ZXO A;  3GTK A;  1J6X A;  1UV7 A;  1Y1V K;  4LK1 A;  2FQO A;  3HOV C;  1WCM A;  3RZD C;  2O5J A;  5CJ9 A;  3PIP S;  3HOY K;  5FLM C;  4M1X A;  3ORE A;  1BGW A;  3GTJ A;  1EH1 A;  5IP9 K;  3GTJ K;  2R7Z C;  1TWH A;  4PAB A;  1TWF A;  3HKZ D;  3LAP A;  1YCL A;  1TWH K;  3HOU K;  4C3H C;  2E2I C;  5M5W K;  2ZUE A;  1TWC C; 
#chains in the Genus database with same CATH homology
 2R93 C;  2VUM K;  4BY7 C;  2JA7 C;  3I4N C;  3DXJ A;  2A6E A;  4BXX C;  5IYB C;  4LJZ A;  2WB1 L;  3S1N C;  3GTQ K;  4QIW L;  2WB1 D;  3GTP C;  4MEY A;  4Q5S A;  3RZO K;  1I50 C;  1YNJ A;  4OIN A;  3S1R K;  2A68 A;  3S17 C;  3EQL A;  2YU9 K;  3HOV K;  4C3I C;  4Y52 C;  4C3J K;  4A3M K;  3GTO C;  4AYB D;  2PA8 L;  1SFO K;  3H3V L;  4A3B C;  2PA8 D;  3H3V D;  3RZD K;  2E2J C;  1TWG C;  2B63 C;  5C4X K;  4BBS K;  3CQZ C;  4YFN A;  5IYC C;  1HQM A;  4QJV B;  1R9T K;  3GTK C;  2PPB A;  3S2D K;  4A93 C;  4XLP A;  5FLM K;  3HKZ L;  5C4J C;  4YFX A;  4A3D C;  5IP7 C;  3GTL C;  4GZY A;  5C44 K;  3GTM K;  3HOX K;  3M3Y K;  3PO3 K;  4C2M K;  4YG2 A;  2E2H K;  3S2H C;  3S14 C;  2R7Z K;  4XSX A;  1WCM C;  4YFK A;  5D4D A;  4Y7N C;  4A3K C;  3H0G K;  4A3F K;  2PMZ D;  4BBR K;  1BDF A;  3FKI C;  5FJ8 K;  4A3J K;  3HOZ C;  3S16 K;  1Y1W K;  3S1Q K;  4C3H K;  1I6V A;  1TWC K;  2JA5 K;  2R93 K;  3K7A C;  4KMU A;  4BY1 C;  4BY7 K;  4JK1 A;  3GTJ C;  3I4N K;  4BXX K;  5TMF A;  2WAQ D;  5IYD C;  5IYB K;  5M3F K;  1SMY A;  4A3E C;  3S1N K;  3S1M C;  4OIQ A;  1TWH C;  4NOI A;  1TWA K;  1TWF C;  3GTP K;  4AYB L;  2NVT C;  1I50 K;  4QJV A;  1Y1V C;  3S17 K;  4Y52 K;  4XLN A;  3HOW C;  4A3L C;  5M3M K;  2O5I A;  4LLG A;  3GTO K;  4A3B K;  4X6A C;  2E2J K;  1TWG K;  2B63 K;  2JA6 C;  3I4M C;  4A3C C;  3CQZ K;  4XSZ A;  2Y0S D;  5IYC K;  2NVY C;  1ZYR A;  2NVX K;  3GTK K;  2NVQ C;  2YU9 C;  5C4J K;  2PMZ L;  5C3E K;  4A3D K;  5IP7 K;  3GTL K;  3HOY C;  2JA8 C;  4Q4Z A;  4A3G C;  1I3Q C;  3S15 C;  4G7Z A;  2E2I K;  3S2H K;  3S14 K;  2BE5 A;  3M4O K;  1WCM K;  5IP9 C;  4A3K K;  1R9T C;  4KN4 A;  3FKI K;  2JA7 K;  2WAQ L;  4G7O A;  2R92 C;  1K83 C;  3PO2 C;  4ZH4 A;  1I6H C;  4OIR A;  4A3I C;  4KN7 A;  3HOU C;  4BY1 K;  4OIO A;  3GTG C;  1IW7 A;  5IYD K;  4A3F C;  2VUM C;  1XPP A;  4A3E K;  4C3I K;  2CW0 A;  1TWF K;  5M5Y K;  2NVT K;  3GTQ C;  1Y1V K;  2Y0S L;  3RZO C;  3HOW K;  3S1R C;  4A3L K;  4LK1 A;  4A93 K;  3HOV C;  4QIW D;  4C3J C;  1TWA C;  4X6A K;  2JA6 K;  4A3M C;  3I4M K;  4MEX A;  4A3C K;  1SFO C;  2NVY K;  3WOD A;  4OIP A;  3RZD C;  2O5J A;  2NVQ K;  5C4X C;  2A6H A;  4G7H A;  4BBS C;  4Y7N K;  3S2D C;  3HOY K;  5M5X K;  2JA8 K;  2A69 A;  5FLM C;  4A3G K;  1I3Q K;  3HOZ K;  3S15 K;  4MQ9 A;  5C44 C;  3M3Y C;  3GTM C;  3PO3 C;  3HOX C;  5IP9 K;  1YNN A;  5TMC A;  4C2M C;  4LK0 A;  2E2H C;  2NVX C;  3K7A K;  3GTJ K;  2R7Z C;  3HKZ D;  5C3E C;  3H0G C;  1K83 K;  2R92 K;  3PO2 K;  4BBR C;  4A3J C;  3S16 C;  3S1M K;  1I6H K;  1TWH K;  1Y1W C;  3S1Q C;  4A3I K;  4C3H C;  3HOU K;  2E2I C;  3M4O C;  3GTG K;  5M5W K;  1TWC C;  2JA5 C;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1I6HC

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations