2A6HA

Crystal structure of the t. thermophilus rna polymerase holoenzyme in complex with antibiotic sterptolydigin
Total Genus 42

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
229
structure length
229
Chain Sequence
MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (10-16)TIV3 (17-20)S14 (193-201)EMPTYS2 (20-28)TIV4 (29-32)AH1 (32-47)S13 (174-183)S3 (49-58)S4 (87-89)S11 (165-166)S9 (137-148)TI3 (58-61)TI4 (63-66)AH2 (75-84)TII1 (68-71)TIV8 (133-136)TIV7 (122-125)TIV10 (203-206)S7 (120-122)TI5 (117-120)TIV5 (91-94)S5 (96-104)TIV6 (104-107)3H1 (111-113)S6 (108-110)TI6 (124-127)TVIII3 (159-162)S10 (150-151)S12 (169-170)TI7 (161-164)AH4 (207-224)S8 (128-131)AH3 (153-156)Updating...
connected with : NaN
molecule tags Transferase
publication title Structural basis of transcription inhibition by antibiotic streptolydigin.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase alpha chain
total genus 42
structure length 229
sequence length 229
chains with identical sequence B, K, L
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2005-07-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2a6hA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2a6hA01
5C3EK 4LK1A 2A6EA 4MEXA 3HOVC 3DXJA 2YU9K 5M5WK 3PO3C 5IP7C 1SFOK 1YNJA 1Y1WC 3HOYC 4Y52K 2NVQC 4BBRC 4QJVA 3I4NC 4LLGA 3S2DC 4BBRK 2PPBA 4A3EC 2NVTK 4XSXA 5D4DA 3I4NK 4QIWL 2Y0SL 3GTQK 2WB1D 1I3QC 5IYBC 4A3EK 2E2JC 2JA5C 3GTKC 3S17C 5FLMK 4Q4ZA 5C44C 1IW7A 3M4OC 3GTKK 2E2IK 2R93K 4AYBD 2NVYK 2WAQD 1TWGC 3PO2C 5M5YK 3M4OK 1WCMC 4GZYA 4AYBL 4YFXA 4A3CK 2JA6C 4G7ZA 3S1RC 3GTMC 1I6VA 1TWGK 4QJVB 4A3FK 2VUMC 4MEYA 4A93C 3S16K 4A3MK 1I50C 2B63C 4YFKA 1TWFC 5M3MK 2A68A 4A3BC 3H0GK 4A3LK 4A93K 3S1QC 1I50K 3M3YC 3HOWC 3GTPC 3RZOC 3GTLK 4KN7A 3GTGC 3K7AC 4LK0A 3HOVK 3M3YK 3HOZC 3S1QK 3K7AK 3PO3K 5IP7K 4BY1C 4A3KC 3S14C 3S15C 1Y1WK 1TWAC 2JA7C 3HOYK 2NVXC 2NVQK 4BY1K 4A3JC 5IYDC 3S14K 3S15K 3S2DK 2JA7K 3HOXC 2O5IA 1XPPA 4A3JK 5IYCC 4A3GC 2WB1L 5C4JC 4C3IC 5IYBK 1I3QK 5IYCK 4OIQA 3S1NC 2E2JK 3H3VD 2JA5K 3HKZD 3S1MC 4C3IK 3S17K 4XLNA 2A6HA 5C4XC 5C44K 4KN4A 3H3VL 1K83C 2WAQL 3PO2K 3GTOC 1WCMK 5FJ8K 3WODA 2JA6K 4Y7NC 2R7ZC 4BXXC 3S1RK 3GTMK 2VUMK 2A69A 4Y7NK 2PMZD 4BXXK 4BY7C 4JK1A 2B63K 4G7OA 1TWFK 2PMZL 1R9TC 4A3BK 4BY7K 4G7HA 1HQMA 3HOWK 3GTPK 4OIPA 3RZOK 3RZDC 3GTGK 4YFNA 2R92C 5IP9C 3FKIC 4C2MC 4XLPA 3HOZK 4A3IC 3CQZC 4C2MK 4MQ9A 4A3KK 2PA8D 4C3HC 3HOUC 3GTJC 3I4MC 3S2HC 1TWAK 4A3IK 2NVXK 5IYDK 4C3HK 3S2HK 3GTJK 2BE5A 2E2HC 3HOXK 4X6AC 4A3GK 1TWCC 5C4JK 1TWHC 5M3FK 5C3EC 4X6AK 3S1NK 3HKZL 3S1MK 1TWHK 4C3JC 5C4XK 4BBSC 1SFOC 1K83K 4OINA 4Y52C 4C3JK 4BBSK 3GTOK 4XSZA 4OIRA 2R7ZK 2JA8C 1Y1VC 2NVTC 5M5XK 4ZH4A 3GTQC 2JA8K 4QIWD 2Y0SD 5TMCA 1Y1VK 4OIOA 1R9TK 2O5JA 4LJZA 5FLMC 1SMYA 3RZDK 2E2IC 4A3DC 2R93C 2R92K 2NVYC 5IP9K 3FKIK 3EQLA 1BDFA 5TMFA 4A3CC 4YG2A 3CQZK 4A3DK 4KMUA 2PA8L 1I6HC 1ZYRA 4A3FC 3I4MK 3HOUK 4Q5SA 1YNNA 2CW0A 3S16C 1I6HK 4A3MC 2E2HK 3H0GC 4A3LC 3GTLC 1TWCK 4NOIA 2YU9C
chains in the Genus database with same CATH superfamily
5C3EK 4LR2A 5M5WK 1XXBA 4BLBA 5IP7C 4RMFA 1V5VA 1F7UA 3LAPA 1Y1WA 1O26A 2PPBA 4A3EC 5IORA 4QIWL 4KC6A 3GTQK 2WB1D 1I3QC 5IYBC 5L46A 4A3EK 2JA5C 5E68A 5FLMK 1WORA 3M4OC 1AB4A 3A8IA 2E2IK 4AYBD 3M4OK 4AYBL 4P9SA 2ZFZA 2EBBA 4A93C 1WCMA 3VA7A 3S16K 2ZJPS 4A93K 3GTPC 2ZUFA 3N3YA 1JOEA 3HOVK 1DCPA 3SZYA 5DM6S 3PO3K 4XCHA 2GSOA 1BJTA 1Y1WK 1TWAC 2NVQK 4A3JC 4KATA 4A3JK 2NVXA 1WQHA 4WJ4A 2E2JK 3S1NC 3H3VD 3FOFA 4XLNA 3H3VL 4KN4A 1K83C 3AQPA 3PO2K 1WCMK 5FJ8K 4FZBA 4Y7NC 2R7ZC 3S1RK 4G0VA 3GTOA 4Y7NK 4JK1A 3GEIA 4A3BK 4WF9S 1HQMA 2R92C 5IP9C 4C2MC 4XLPA 2FQTA 3HOZK 4KDDA 3CQZC 4P5AA 4C2MK 4MQ9A 3I4MC 3FKIA 2NVXK 3DLLS 3SZZA 4G0UA 3TTGA 4X6AC 3BP8C 4X6AK 2E2HA 3S1MK 1TWCA 3CF5S 4OINA 5JVOA 4Y52C 1ISEA 4XSZA 3GTOK 1O25A 1SFOA 4ZH4A 1JVIA 2V6SA 4WFNS 1PJ6A 4GTFA 3RZDK 5IOTA 4AH6A 1VRQC 3FKIK 3EQLA 4PABA 4WCES 1L0WA 3ERED 3GTKA 2PA8L 1ZYRA 2NVYA 3HOUK 1X31C 1F9NA 2JH3A 3OPFA 2E2HK 3H0GC 4A3LC 1TWCK 3LPXA 3N0CA 2A6EA 1USOA 4GTCA 3GTLA 3QX3A 1SFOK 3HOYC 1EH1A 3GEEA 4KB4A 4QJVA 3I4NC 3S2DC 1J98A 1VLOA 3I4NK 2NVTK 5D4DA 2Y0SL 3GTKC 1EK8A 3S17C 1IW7A 3GTKK 3BUEA 5JFEA 4GFQA 5EGEA 1I3QA 2JA5A 2NVYK 4G0WA 2WAQD 1BS2A 4A3CK 4YFXA 2JA6C 4G7ZA 4A3FK 4QJVB 2VUMC 2Y3PA 1EQRA 4KM8A 2B63C 1TWFC 3GTLK 3HOWC 3FOEA 3GTGC 4LK0A 2D6FC 3GTPA 5IP7K 3TFJA 5CJ9A 3GIRA 4BY1C 1WQFA 2ZJQS 4BY1K 1O24A 3HOXC 1TWAA 5IYCC 3L4JA 2WB1L 5C4JC 4C3IC 5IYBK 1I3QK 3T02A 3GTJA 5IYCK 2JA5K 3HKZD 4KMAA 4C3IK 1B4AA 2A6HA 5C4XC 1JQWA 1TWHA 3WODA 5TJ3A 4BXXC 1K83A 2A69A 4BXXK 2PMZD 3AD9C 4BY7C 2R7ZA 2PMZL 4WILA 4BY7K 4G7HA 3GTPK 3S0XA 1XXCA 4J3NA 1PJ7A 3ADAC 4GTLA 2R92A 3S2HC 4C45A 3GTJC 1TWAK 1G51A 1IL2A 3CQZA 3S2HK 3GTJK 4O2DA 1TWHC 3S1NK 4IOCS 1TWHK 1UV7A 1ZBSA 1K83K 2YU9A 4OIRA 3FHZA 2R7ZK 3A8KA 4ILDA 4A3DC 2R93C 2KWAA 2R92K 5CHPA 5IP9K 4A3DK 3CQZK 4KMUA 1I6HC 4GTAA 3I4MK 3G4AA 3GSIA 1ZQ1C 1I6HK 4A3MC 1O28A 1TWGA 1WOSA 2PHCB 1O2FB 2YU9C 3LAJA 4LK1A 3H0GA 3DXJA 4GTBA 1I50A 2YU9K 1KQ4A 4Y52K 4BBRC 2P5MA 4LLGA 4BBRK 1USMA 4XSXA 1VJEA 1F93A 2KXYA 4Q4ZA 3BP3A 5C44C 1TWGC 5M5YK 4GZYA 5JVGS 1YX2A 1XXAA 1TWGK 3GTMC 1I6VA 4MEYA 1I50C 2JA6A 2GAGC 1YCLA 2A68A 3H0GK 3Q3QA 1B4BA 4A3LK 2VUMA 1I50K 3TFIA 3RZOC 1O29A 4KN7A 2B63A 1TWFA 3AD7C 1BGWA 3GTGA 3S15C 4A3KC 3S14C 3HOYK 3S15K 3S14K 5IYDC 2KPUA 3S2DK 4KMDA 2O5IA 1XPPA 1VGXA 2L3UA 4A3GC 3LYWA 3S17K 4GTDA 2RH6A 2WAQL 3CAGA 2JA6K 3T01A 2VUMK 1WQGA 5HL7S 2B63K 1TWFK 1R9TC 1XZPA 3HOWK 3GTGK 1Y1VA 4YFNA 3T00A 2GSNA 2ZJRS 2KQ1A 2XCOA 4KAWX 3L4KA 3GEHA 4LQYA 4M1XA 5JVHS 1HI9A 3HOXK 1RU0A 2P8TA 4KARA 5C4JK 5C3EC 1XZPB 1F7VA 3HKZL 2RGRA 5C4XK 5HQHA 1VH2A 3AD8C 2W7VA 1XZQA 1ZXOA 1J6WA 2JA8C 1O2BA 1Y1VC 5M5XK 1EFWA 3GTQC 2JA8K 4QIWD 1WOPA 5TMCA 1Y1VK 4OIOA 4LJZA 5FLMC 4DDQA 2E2IC 2GSUA 1PJ5A 3N0BA 1XZQB 2R93A 3HXAA 1YNNA 2CW0A 3S16C 4KASA 4KB2A 4NOIA 4GTEA 4MEXA 3HOVC 4BKWA 3PO3C 1YNJA 5IOQA 1Y1WC 2XCRB 2NVQC 3AQOA 3IPJA 2XCQA 1FEUA 1GE9A 4WFBS 2JA7A 2E2JC 2R93K 3G4CA 1O27A 3PO2C 4WFAS 1WCMC 4KM9A 3AH5A 3S1RC 4FM9A 4A3MK 4YFKA 4KMHA 5M3MK 1ZVUA 4A3BC 3GTMA 3S1QC 1IS1A 3M3YC 5IOSA 3K7AC 3S1QK 3M3YK 3HOZC 1C0AA 2GAHC 1WSVA 1J6VA 3K7AK 5DM7S 2JA7C 4U67S 2NVXC 1DCHA 2V6TA 2JA7K 3OEPA 4IOAS 4OIQA 3JSTA 3A8JA 3S1MC 1IBAA 5C44K 3MMLB 4WJ3M 3GTOC 3NUHA 4BLAA 5EGHA 2CFAA 3GTMK 1WSRA 3V4GA 4G7OA 3TFHA 1IQ0A 4IO9S 4OIPA 3RZOK 3RZDC 3PIOS 1R9TA 2FQOA 3FKIC 4A3IC 4LOWA 4A3KK 2PA8D 4C3HC 3HOUC 4A3IK 3GDZA 2CFAB 5IYDK 4C3HK 2BE5A 2E2HC 1O2AA 4A3GK 1TWCC 5M3FK 1EI6A 1DCOA 1J6XA 4PAAA 4C3JC 4BBSC 1SFOC 2V6UA 4C3JK 4BBSK 3OREA 2NVTC 2Y0SD 1R9TK 2O5JA 1WOOA 4GT9A 1SMYA 3GTQA 5HL8A 2NVYC 1DD5A 1BDFA 5TMFA 4A3CC 4YG2A 2ZUEA 1INNA 2E2IA 4A3FC 4P5BA 4Q5SA 1IE0A 1WIHA 3PIPS 2L5NA 3GTLC
chains in the Genus database with same CATH topology
5C3EK 4LK1A 2A6EA 4MEXA 3HOVC 3DXJA 2YU9K 5M5WK 3PO3C 5IP7C 1SFOK 1YNJA 1Y1WC 3HOYC 4Y52K 2NVQC 4BBRC 4QJVA 3I4NC 4LLGA 3S2DC 4BBRK 2PPBA 4A3EC 2NVTK 4XSXA 5D4DA 3I4NK 4QIWL 2Y0SL 3GTQK 2WB1D 1I3QC 5IYBC 4A3EK 2E2JC 2JA5C 3GTKC 3S17C 5FLMK 4Q4ZA 5C44C 1IW7A 3M4OC 3GTKK 2E2IK 2R93K 4AYBD 2NVYK 2WAQD 1TWGC 3PO2C 5M5YK 3M4OK 1WCMC 4GZYA 4AYBL 4YFXA 4A3CK 2JA6C 4G7ZA 3S1RC 3GTMC 1I6VA 1TWGK 4QJVB 4A3FK 2VUMC 4MEYA 4A93C 3S16K 4A3MK 1I50C 2B63C 4YFKA 1TWFC 5M3MK 2A68A 4A3BC 3H0GK 4A3LK 4A93K 3S1QC 1I50K 3M3YC 3HOWC 3GTPC 3RZOC 3GTLK 4KN7A 3GTGC 3K7AC 4LK0A 3HOVK 3M3YK 3HOZC 3S1QK 3K7AK 3PO3K 5IP7K 4BY1C 4A3KC 3S14C 3S15C 1Y1WK 1TWAC 2JA7C 3HOYK 2NVXC 2NVQK 4BY1K 4A3JC 5IYDC 3S14K 3S15K 3S2DK 2JA7K 3HOXC 2O5IA 1XPPA 4A3JK 5IYCC 4A3GC 2WB1L 5C4JC 4C3IC 5IYBK 1I3QK 5IYCK 4OIQA 3S1NC 2E2JK 3H3VD 2JA5K 3HKZD 3S1MC 4C3IK 3S17K 4XLNA 2A6HA 5C4XC 5C44K 4KN4A 3H3VL 1K83C 2WAQL 3PO2K 3GTOC 1WCMK 5FJ8K 3WODA 2JA6K 4Y7NC 2R7ZC 4BXXC 3S1RK 3GTMK 2VUMK 2A69A 4Y7NK 2PMZD 4BXXK 4BY7C 4JK1A 2B63K 4G7OA 1TWFK 2PMZL 1R9TC 4A3BK 4BY7K 4G7HA 1HQMA 3HOWK 3GTPK 4OIPA 3RZOK 3RZDC 3GTGK 4YFNA 2R92C 5IP9C 3FKIC 4C2MC 4XLPA 3HOZK 4A3IC 3CQZC 4C2MK 4MQ9A 4A3KK 2PA8D 4C3HC 3HOUC 3GTJC 3I4MC 3S2HC 1TWAK 4A3IK 2NVXK 5IYDK 4C3HK 3S2HK 3GTJK 2BE5A 2E2HC 3HOXK 4X6AC 4A3GK 1TWCC 5C4JK 1TWHC 5M3FK 5C3EC 4X6AK 3S1NK 3HKZL 3S1MK 1TWHK 4C3JC 5C4XK 4BBSC 1SFOC 1K83K 4OINA 4Y52C 4C3JK 4BBSK 3GTOK 4XSZA 4OIRA 2R7ZK 2JA8C 1Y1VC 2NVTC 5M5XK 4ZH4A 3GTQC 2JA8K 4QIWD 2Y0SD 5TMCA 1Y1VK 4OIOA 1R9TK 2O5JA 4LJZA 5FLMC 1SMYA 3RZDK 2E2IC 4A3DC 2R93C 2R92K 2NVYC 5IP9K 3FKIK 3EQLA 1BDFA 5TMFA 4A3CC 4YG2A 3CQZK 4A3DK 4KMUA 2PA8L 1I6HC 1ZYRA 4A3FC 3I4MK 3HOUK 4Q5SA 1YNNA 2CW0A 3S16C 1I6HK 4A3MC 2E2HK 3H0GC 4A3LC 3GTLC 1TWCK 4NOIA 2YU9C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5C3E K;  4LK1 A;  2A6E A;  4MEX A;  3HOV C;  3DXJ A;  2YU9 K;  5M5W K;  3PO3 C;  5IP7 C;  1SFO K;  1YNJ A;  1Y1W C;  3HOY C;  4Y52 K;  2NVQ C;  4BBR C;  4QJV A;  3I4N C;  4LLG A;  3S2D C;  4BBR K;  2PPB A;  4A3E C;  2NVT K;  4XSX A;  5D4D A;  3I4N K;  4QIW L;  2Y0S L;  3GTQ K;  2WB1 D;  1I3Q C;  5IYB C;  4A3E K;  2E2J C;  2JA5 C;  3GTK C;  3S17 C;  5FLM K;  4Q4Z A;  5C44 C;  1IW7 A;  3M4O C;  3GTK K;  2E2I K;  2R93 K;  4AYB D;  2NVY K;  2WAQ D;  1TWG C;  3PO2 C;  5M5Y K;  3M4O K;  1WCM C;  4GZY A;  4AYB L;  4YFX A;  4A3C K;  2JA6 C;  4G7Z A;  3S1R C;  3GTM C;  1I6V A;  1TWG K;  4QJV B;  4A3F K;  2VUM C;  4MEY A;  4A93 C;  3S16 K;  4A3M K;  1I50 C;  2B63 C;  4YFK A;  1TWF C;  5M3M K;  2A68 A;  4A3B C;  3H0G K;  4A3L K;  4A93 K;  3S1Q C;  1I50 K;  3M3Y C;  3HOW C;  3GTP C;  3RZO C;  3GTL K;  4KN7 A;  3GTG C;  3K7A C;  4LK0 A;  3HOV K;  3M3Y K;  3HOZ C;  3S1Q K;  3K7A K;  3PO3 K;  5IP7 K;  4BY1 C;  4A3K C;  3S14 C;  3S15 C;  1Y1W K;  1TWA C;  2JA7 C;  3HOY K;  2NVX C;  2NVQ K;  4BY1 K;  4A3J C;  5IYD C;  3S14 K;  3S15 K;  3S2D K;  2JA7 K;  3HOX C;  2O5I A;  1XPP A;  4A3J K;  5IYC C;  4A3G C;  2WB1 L;  5C4J C;  4C3I C;  5IYB K;  1I3Q K;  5IYC K;  4OIQ A;  3S1N C;  2E2J K;  3H3V D;  2JA5 K;  3HKZ D;  3S1M C;  4C3I K;  3S17 K;  4XLN A;  2A6H A;  5C4X C;  5C44 K;  4KN4 A;  3H3V L;  1K83 C;  2WAQ L;  3PO2 K;  3GTO C;  1WCM K;  5FJ8 K;  3WOD A;  2JA6 K;  4Y7N C;  2R7Z C;  4BXX C;  3S1R K;  3GTM K;  2VUM K;  2A69 A;  4Y7N K;  2PMZ D;  4BXX K;  4BY7 C;  4JK1 A;  2B63 K;  4G7O A;  1TWF K;  2PMZ L;  1R9T C;  4A3B K;  4BY7 K;  4G7H A;  1HQM A;  3HOW K;  3GTP K;  4OIP A;  3RZO K;  3RZD C;  3GTG K;  4YFN A;  2R92 C;  5IP9 C;  3FKI C;  4C2M C;  4XLP A;  3HOZ K;  4A3I C;  3CQZ C;  4C2M K;  4MQ9 A;  4A3K K;  2PA8 D;  4C3H C;  3HOU C;  3GTJ C;  3I4M C;  3S2H C;  1TWA K;  4A3I K;  2NVX K;  5IYD K;  4C3H K;  3S2H K;  3GTJ K;  2BE5 A;  2E2H C;  3HOX K;  4X6A C;  4A3G K;  1TWC C;  5C4J K;  1TWH C;  5M3F K;  5C3E C;  4X6A K;  3S1N K;  3HKZ L;  3S1M K;  1TWH K;  4C3J C;  5C4X K;  4BBS C;  1SFO C;  1K83 K;  4OIN A;  4Y52 C;  4C3J K;  4BBS K;  3GTO K;  4XSZ A;  4OIR A;  2R7Z K;  2JA8 C;  1Y1V C;  2NVT C;  5M5X K;  4ZH4 A;  3GTQ C;  2JA8 K;  4QIW D;  2Y0S D;  5TMC A;  1Y1V K;  4OIO A;  1R9T K;  2O5J A;  4LJZ A;  5FLM C;  1SMY A;  3RZD K;  2E2I C;  4A3D C;  2R93 C;  2R92 K;  2NVY C;  5IP9 K;  3FKI K;  3EQL A;  1BDF A;  5TMF A;  4A3C C;  4YG2 A;  3CQZ K;  4A3D K;  4KMU A;  2PA8 L;  1I6H C;  1ZYR A;  4A3F C;  3I4M K;  3HOU K;  4Q5S A;  1YNN A;  2CW0 A;  3S16 C;  1I6H K;  4A3M C;  2E2H K;  3H0G C;  4A3L C;  3GTL C;  1TWC K;  4NOI A;  2YU9 C; 
#chains in the Genus database with same CATH topology
 5C3E K;  4LR2 A;  5M5W K;  1XXB A;  4BLB A;  5IP7 C;  4RMF A;  1V5V A;  1F7U A;  3LAP A;  1Y1W A;  1O26 A;  2PPB A;  4A3E C;  5IOR A;  4QIW L;  4KC6 A;  3GTQ K;  2WB1 D;  1I3Q C;  5IYB C;  5L46 A;  4A3E K;  2JA5 C;  5E68 A;  5FLM K;  1WOR A;  3M4O C;  1AB4 A;  3A8I A;  2E2I K;  4AYB D;  3M4O K;  4AYB L;  4P9S A;  2ZFZ A;  2EBB A;  4A93 C;  1WCM A;  3VA7 A;  3S16 K;  2ZJP S;  4A93 K;  3GTP C;  2ZUF A;  3N3Y A;  1JOE A;  3HOV K;  1DCP A;  3SZY A;  5DM6 S;  3PO3 K;  4XCH A;  2GSO A;  1BJT A;  1Y1W K;  1TWA C;  2NVQ K;  4A3J C;  4KAT A;  4A3J K;  2NVX A;  1WQH A;  4WJ4 A;  2E2J K;  3S1N C;  3H3V D;  3FOF A;  4XLN A;  3H3V L;  4KN4 A;  1K83 C;  3AQP A;  3PO2 K;  1WCM K;  5FJ8 K;  4FZB A;  4Y7N C;  2R7Z C;  3S1R K;  4G0V A;  3GTO A;  4Y7N K;  4JK1 A;  3GEI A;  4A3B K;  4WF9 S;  1HQM A;  2R92 C;  5IP9 C;  4C2M C;  4XLP A;  2FQT A;  3HOZ K;  4KDD A;  3CQZ C;  4P5A A;  4C2M K;  4MQ9 A;  3I4M C;  3FKI A;  2NVX K;  3DLL S;  3SZZ A;  4G0U A;  3TTG A;  4X6A C;  3BP8 C;  4X6A K;  2E2H A;  3S1M K;  1TWC A;  3CF5 S;  4OIN A;  5JVO A;  4Y52 C;  1ISE A;  4XSZ A;  3GTO K;  1O25 A;  1SFO A;  4ZH4 A;  1JVI A;  2V6S A;  4WFN S;  1PJ6 A;  4GTF A;  3RZD K;  5IOT A;  4AH6 A;  1VRQ C;  3FKI K;  3EQL A;  4PAB A;  4WCE S;  1L0W A;  3ERE D;  3GTK A;  2PA8 L;  1ZYR A;  2NVY A;  3HOU K;  1X31 C;  1F9N A;  2JH3 A;  3OPF A;  2E2H K;  3H0G C;  4A3L C;  1TWC K;  3LPX A;  3N0C A;  2A6E A;  1USO A;  4GTC A;  3GTL A;  3QX3 A;  1SFO K;  3HOY C;  1EH1 A;  3GEE A;  4KB4 A;  4QJV A;  3I4N C;  3S2D C;  1J98 A;  1VLO A;  3I4N K;  2NVT K;  5D4D A;  2Y0S L;  3GTK C;  1EK8 A;  3S17 C;  1IW7 A;  3GTK K;  3BUE A;  5JFE A;  4GFQ A;  5EGE A;  1I3Q A;  2JA5 A;  2NVY K;  4G0W A;  2WAQ D;  1BS2 A;  4A3C K;  4YFX A;  2JA6 C;  4G7Z A;  4A3F K;  4QJV B;  2VUM C;  2Y3P A;  1EQR A;  4KM8 A;  2B63 C;  1TWF C;  3GTL K;  3HOW C;  3FOE A;  3GTG C;  4LK0 A;  2D6F C;  3GTP A;  5IP7 K;  3TFJ A;  5CJ9 A;  3GIR A;  4BY1 C;  1WQF A;  2ZJQ S;  4BY1 K;  1O24 A;  3HOX C;  1TWA A;  5IYC C;  3L4J A;  2WB1 L;  5C4J C;  4C3I C;  5IYB K;  1I3Q K;  3T02 A;  3GTJ A;  5IYC K;  2JA5 K;  3HKZ D;  4KMA A;  4C3I K;  1B4A A;  2A6H A;  5C4X C;  1JQW A;  1TWH A;  3WOD A;  5TJ3 A;  4BXX C;  1K83 A;  2A69 A;  4BXX K;  2PMZ D;  3AD9 C;  4BY7 C;  2R7Z A;  2PMZ L;  4WIL A;  4BY7 K;  4G7H A;  3GTP K;  3S0X A;  1XXC A;  4J3N A;  1PJ7 A;  3ADA C;  4GTL A;  2R92 A;  3S2H C;  4C45 A;  3GTJ C;  1TWA K;  1G51 A;  1IL2 A;  3CQZ A;  3S2H K;  3GTJ K;  4O2D A;  1TWH C;  3S1N K;  4IOC S;  1TWH K;  1UV7 A;  1ZBS A;  1K83 K;  2YU9 A;  4OIR A;  3FHZ A;  2R7Z K;  3A8K A;  4ILD A;  4A3D C;  2R93 C;  2KWA A;  2R92 K;  5CHP A;  5IP9 K;  4A3D K;  3CQZ K;  4KMU A;  1I6H C;  4GTA A;  3I4M K;  3G4A A;  3GSI A;  1ZQ1 C;  1I6H K;  4A3M C;  1O28 A;  1TWG A;  1WOS A;  2PHC B;  1O2F B;  2YU9 C;  3LAJ A;  4LK1 A;  3H0G A;  3DXJ A;  4GTB A;  1I50 A;  2YU9 K;  1KQ4 A;  4Y52 K;  4BBR C;  2P5M A;  4LLG A;  4BBR K;  1USM A;  4XSX A;  1VJE A;  1F93 A;  2KXY A;  4Q4Z A;  3BP3 A;  5C44 C;  1TWG C;  5M5Y K;  4GZY A;  5JVG S;  1YX2 A;  1XXA A;  1TWG K;  3GTM C;  1I6V A;  4MEY A;  1I50 C;  2JA6 A;  2GAG C;  1YCL A;  2A68 A;  3H0G K;  3Q3Q A;  1B4B A;  4A3L K;  2VUM A;  1I50 K;  3TFI A;  3RZO C;  1O29 A;  4KN7 A;  2B63 A;  1TWF A;  3AD7 C;  1BGW A;  3GTG A;  3S15 C;  4A3K C;  3S14 C;  3HOY K;  3S15 K;  3S14 K;  5IYD C;  2KPU A;  3S2D K;  4KMD A;  2O5I A;  1XPP A;  1VGX A;  2L3U A;  4A3G C;  3LYW A;  3S17 K;  4GTD A;  2RH6 A;  2WAQ L;  3CAG A;  2JA6 K;  3T01 A;  2VUM K;  1WQG A;  5HL7 S;  2B63 K;  1TWF K;  1R9T C;  1XZP A;  3HOW K;  3GTG K;  1Y1V A;  4YFN A;  3T00 A;  2GSN A;  2ZJR S;  2KQ1 A;  2XCO A;  4KAW X;  3L4K A;  3GEH A;  4LQY A;  4M1X A;  5JVH S;  1HI9 A;  3HOX K;  1RU0 A;  2P8T A;  4KAR A;  5C4J K;  5C3E C;  1XZP B;  1F7V A;  3HKZ L;  2RGR A;  5C4X K;  5HQH A;  1VH2 A;  3AD8 C;  2W7V A;  1XZQ A;  1ZXO A;  1J6W A;  2JA8 C;  1O2B A;  1Y1V C;  5M5X K;  1EFW A;  3GTQ C;  2JA8 K;  4QIW D;  1WOP A;  5TMC A;  1Y1V K;  4OIO A;  4LJZ A;  5FLM C;  4DDQ A;  2E2I C;  2GSU A;  1PJ5 A;  3N0B A;  1XZQ B;  2R93 A;  3HXA A;  1YNN A;  2CW0 A;  3S16 C;  4KAS A;  4KB2 A;  4NOI A;  4GTE A;  4MEX A;  3HOV C;  4BKW A;  3PO3 C;  1YNJ A;  5IOQ A;  1Y1W C;  2XCR B;  2NVQ C;  3AQO A;  3IPJ A;  2XCQ A;  1FEU A;  1GE9 A;  4WFB S;  2JA7 A;  2E2J C;  2R93 K;  3G4C A;  1O27 A;  3PO2 C;  4WFA S;  1WCM C;  4KM9 A;  3AH5 A;  3S1R C;  4FM9 A;  4A3M K;  4YFK A;  4KMH A;  5M3M K;  1ZVU A;  4A3B C;  3GTM A;  3S1Q C;  1IS1 A;  3M3Y C;  5IOS A;  3K7A C;  3S1Q K;  3M3Y K;  3HOZ C;  1C0A A;  2GAH C;  1WSV A;  1J6V A;  3K7A K;  5DM7 S;  2JA7 C;  4U67 S;  2NVX C;  1DCH A;  2V6T A;  2JA7 K;  3OEP A;  4IOA S;  4OIQ A;  3JST A;  3A8J A;  3S1M C;  1IBA A;  5C44 K;  3MML B;  4WJ3 M;  3GTO C;  3NUH A;  4BLA A;  5EGH A;  2CFA A;  3GTM K;  1WSR A;  3V4G A;  4G7O A;  3TFH A;  1IQ0 A;  4IO9 S;  4OIP A;  3RZO K;  3RZD C;  3PIO S;  1R9T A;  2FQO A;  3FKI C;  4A3I C;  4LOW A;  4A3K K;  2PA8 D;  4C3H C;  3HOU C;  4A3I K;  3GDZ A;  2CFA B;  5IYD K;  4C3H K;  2BE5 A;  2E2H C;  1O2A A;  4A3G K;  1TWC C;  5M3F K;  1EI6 A;  1DCO A;  1J6X A;  4PAA A;  4C3J C;  4BBS C;  1SFO C;  2V6U A;  4C3J K;  4BBS K;  3ORE A;  2NVT C;  2Y0S D;  1R9T K;  2O5J A;  1WOO A;  4GT9 A;  1SMY A;  3GTQ A;  5HL8 A;  2NVY C;  1DD5 A;  1BDF A;  5TMF A;  4A3C C;  4YG2 A;  2ZUE A;  1INN A;  2E2I A;  4A3F C;  4P5B A;  4Q5S A;  1IE0 A;  1WIH A;  3PIP S;  2L5N A;  3GTL C; 
#chains in the Genus database with same CATH homology
 5C3E K;  4LK1 A;  2A6E A;  4MEX A;  3HOV C;  3DXJ A;  2YU9 K;  5M5W K;  3PO3 C;  5IP7 C;  1SFO K;  1YNJ A;  1Y1W C;  3HOY C;  4Y52 K;  2NVQ C;  4BBR C;  4QJV A;  3I4N C;  4LLG A;  3S2D C;  4BBR K;  2PPB A;  4A3E C;  2NVT K;  4XSX A;  5D4D A;  3I4N K;  4QIW L;  2Y0S L;  3GTQ K;  2WB1 D;  1I3Q C;  5IYB C;  4A3E K;  2E2J C;  2JA5 C;  3GTK C;  3S17 C;  5FLM K;  4Q4Z A;  5C44 C;  1IW7 A;  3M4O C;  3GTK K;  2E2I K;  2R93 K;  4AYB D;  2NVY K;  2WAQ D;  1TWG C;  3PO2 C;  5M5Y K;  3M4O K;  1WCM C;  4GZY A;  4AYB L;  4YFX A;  4A3C K;  2JA6 C;  4G7Z A;  3S1R C;  3GTM C;  1I6V A;  1TWG K;  4QJV B;  4A3F K;  2VUM C;  4MEY A;  4A93 C;  3S16 K;  4A3M K;  1I50 C;  2B63 C;  4YFK A;  1TWF C;  5M3M K;  2A68 A;  4A3B C;  3H0G K;  4A3L K;  4A93 K;  3S1Q C;  1I50 K;  3M3Y C;  3HOW C;  3GTP C;  3RZO C;  3GTL K;  4KN7 A;  3GTG C;  3K7A C;  4LK0 A;  3HOV K;  3M3Y K;  3HOZ C;  3S1Q K;  3K7A K;  3PO3 K;  5IP7 K;  4BY1 C;  4A3K C;  3S14 C;  3S15 C;  1Y1W K;  1TWA C;  2JA7 C;  3HOY K;  2NVX C;  2NVQ K;  4BY1 K;  4A3J C;  5IYD C;  3S14 K;  3S15 K;  3S2D K;  2JA7 K;  3HOX C;  2O5I A;  1XPP A;  4A3J K;  5IYC C;  4A3G C;  2WB1 L;  5C4J C;  4C3I C;  5IYB K;  1I3Q K;  5IYC K;  4OIQ A;  3S1N C;  2E2J K;  3H3V D;  2JA5 K;  3HKZ D;  3S1M C;  4C3I K;  3S17 K;  4XLN A;  2A6H A;  5C4X C;  5C44 K;  4KN4 A;  3H3V L;  1K83 C;  2WAQ L;  3PO2 K;  3GTO C;  1WCM K;  5FJ8 K;  3WOD A;  2JA6 K;  4Y7N C;  2R7Z C;  4BXX C;  3S1R K;  3GTM K;  2VUM K;  2A69 A;  4Y7N K;  2PMZ D;  4BXX K;  4BY7 C;  4JK1 A;  2B63 K;  4G7O A;  1TWF K;  2PMZ L;  1R9T C;  4A3B K;  4BY7 K;  4G7H A;  1HQM A;  3HOW K;  3GTP K;  4OIP A;  3RZO K;  3RZD C;  3GTG K;  4YFN A;  2R92 C;  5IP9 C;  3FKI C;  4C2M C;  4XLP A;  3HOZ K;  4A3I C;  3CQZ C;  4C2M K;  4MQ9 A;  4A3K K;  2PA8 D;  4C3H C;  3HOU C;  3GTJ C;  3I4M C;  3S2H C;  1TWA K;  4A3I K;  2NVX K;  5IYD K;  4C3H K;  3S2H K;  3GTJ K;  2BE5 A;  2E2H C;  3HOX K;  4X6A C;  4A3G K;  1TWC C;  5C4J K;  1TWH C;  5M3F K;  5C3E C;  4X6A K;  3S1N K;  3HKZ L;  3S1M K;  1TWH K;  4C3J C;  5C4X K;  4BBS C;  1SFO C;  1K83 K;  4OIN A;  4Y52 C;  4C3J K;  4BBS K;  3GTO K;  4XSZ A;  4OIR A;  2R7Z K;  2JA8 C;  1Y1V C;  2NVT C;  5M5X K;  4ZH4 A;  3GTQ C;  2JA8 K;  4QIW D;  2Y0S D;  5TMC A;  1Y1V K;  4OIO A;  1R9T K;  2O5J A;  4LJZ A;  5FLM C;  1SMY A;  3RZD K;  2E2I C;  4A3D C;  2R93 C;  2R92 K;  2NVY C;  5IP9 K;  3FKI K;  3EQL A;  1BDF A;  5TMF A;  4A3C C;  4YG2 A;  3CQZ K;  4A3D K;  4KMU A;  2PA8 L;  1I6H C;  1ZYR A;  4A3F C;  3I4M K;  3HOU K;  4Q5S A;  1YNN A;  2CW0 A;  3S16 C;  1I6H K;  4A3M C;  2E2H K;  3H0G C;  4A3L C;  3GTL C;  1TWC K;  4NOI A;  2YU9 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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