2JA7C

Cpd lesion containing rna polymerase ii elongation complex c
Total Genus 44

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
267
structure length
267
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (7-8)S2 (18-23)S14 (228-232)TIV1 (14-17)AH1 (27-40)AH4 (241-262)EMPTYS12 (157-160)S3 (45-49)S4 (53-54)TIV7 (148-151)S9 (129-132)S5 (72-74)TVIII3 (236-239)3H1 (77-79)TI1 (74-77)TIV5 (124-127)3H2 (83-85)O1 (86-88)TIV2 (88-91)TI2 (92-95)TIV3 (93-96)S6 (97-104)O2 (104-106)TIV4 (107-110)S10 (143-147)S7 (111-114)TIV6 (136-139)3H4 (164-166)3H5 (168-170)S13 (176-179)TI3 (184-187)TVIII1 (181-184)TI4 (204-207)TIV8 (187-190)TIV11 (206-209)TIV12 (207-210)TIV13 (214-217)S8 (118-120)S11 (152-154)3H3 (115-117)TIV14 (262-265)AH2 (60-69)AH3 (197-200)TIV9 (193-196)Updating...
connected with : NaN
molecule tags Transferase
publication title Cpd Damage Recognition by Transcribing RNA Polymerase II.
pubmed doi rcsb
molecule keywords 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3'
total genus 44
structure length 267
sequence length 267
chains with identical sequence O
ec nomenclature
pdb deposition date 2006-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2ja7C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2ja7C01
4A3MK 2JA6C 4Y7NK 4Q4ZA 4BY1C 4G7HA 1XPPA 3K7AC 3CQZK 2NVXC 4YFNA 4C3IK 3RZOK 2PPBA 4A3CC 3H3VD 4LK0A 4OIRA 5C44C 4C3JK 3H0GC 2WAQL 3GTMK 3GTLC 3HOYK 4NOIA 3S2DK 3GTQC 2JA5K 5FLMK 3I4NC 1WCMK 1Y1WK 4A3LK 2NVYK 3EQLA 2E2JC 3HOZK 3S15C 3GTOC 3HOWC 3S1QC 4XLPA 4BBSC 2O5IA 4A3EC 5IYBK 4BXXC 4A3KK 5IP7K 1I6VA 5M3MK 2JA8C 3I4MC 4BY7K 1SFOK 4YFKA 2Y0SL 4BBRK 1TWFC 1I3QK 1I6HC 2E2HC 3HKZD 3M4OK 2WAQD 4A3IK 5FJ8K 2R92K 2A68A 5IYCC 5IYDK 1Y1VK 3S16K 1TWAC 4YFXA 2VUMC 5C3EK 2JA7K 3RZDK 4C2MC 3HOVK 2CW0A 3PO3C 5M3FK 4A3GK 3HKZL 2R93K 4X6AC 5C4XC 4AYBD 4LK1A 2JA6K 2E2IK 3S1RK 3M3YC 4KMUA 3PO2C 3K7AK 4MEXA 1TWHC 4C3HC 2NVTC 2NVXK 4BY1K 2R7ZK 4A3DK 1YNJA 3S14C 4Y7NC 4QJVA 3CQZC 2Y0SD 4AYBL 1TWGC 3GTLK 4XSXA 4C3IC 5M5WK 3GTPK 1R9TK 3GTMC 4C3JC 2B63K 3HOXK 3GTGC 2YU9K 2WB1L 3S2DC 1I50K 1TWCK 2E2JK 2NVQC 2JA5C 1K83K 5FLMC 1WCMC 2A6EA 1Y1WC 3FKIK 3GTOK 4ZH4A 4C3HK 4OIOA 2PA8L 4A3EK 1YNNA 4BXXK 3GTJC 4KN7A 4OINA 1BDFA 3S1MK 4A3JC 4A93K 3GTKK 1TWFK 3S17K 4A3KC 3HOUC 4A3FK 5C4JK 5IP9C 5IP7C 3S1NC 4G7ZA 3S2HK 4BY7C 4GZYA 4Y52C 5IYCK 4BBRC 1I3QC 4A3BC 3DXJA 3M4OC 4A3IC 4C2MK 4A3MC 5IYDC 2R92C 4A3CK 1Y1VC 2A69A 2PMZL 3H0GK 2WB1D 5C44K 5C3EC 3RZDC 3HOVC 4A3GC 4JK1A 3RZOC 1HQMA 3PO2K 3GTQK 5TMCA 3M3YK 4MEYA 2PA8D 2R93C 1ZYRA 3I4NK 4QIWL 4KN4A 3HOYC 3S14K 2E2IC 3S1RC 4XSZA 2R7ZC 5M5XK 3S15K 1IW7A 1TWGK 3WODA 3HOWK 4A3DC 5TMFA 4A3LC 3S1QK 4BBSK 2NVYC 1SMYA 3HOZC 2JA8K 3I4MK 3GTPC 3GTGK 1R9TC 2NVQK 5IYBC 4LJZA 1I6HK 2E2HK 4LLGA 2PMZD 2B63C 3H3VL 3HOXC 1SFOC 2YU9C 2O5JA 1I50C 1TWCC 4YG2A 3GTJK 1K83C 3FKIC 1TWAK 2VUMK 4A3JK 2BE5A 5D4DA 3PO3K 4X6AK 4QIWD 3HOUK 4Q5SA 4QJVB 5IP9K 5M5YK 3S1NK 3S16C 4OIPA 2A6HA 4MQ9A 2JA7C 3S1MC 4OIQA 4A93C 3GTKC 4G7OA 3S17C 5C4XK 4A3BK 4A3FC 4Y52K 4XLNA 5C4JC 1TWHK 2NVTK 3S2HC
chains in the Genus database with same CATH superfamily
1XXAA 2D6FC 3CF5S 4BY1C 3ADAC 2L3UA 2EBBA 1L0WA 1ISEA 4KATA 3H3VD 4LK0A 4OIRA 2RH6A 4C3JK 1O2BA 5IORA 3HOYK 4O2DA 3GTQC 4KM9A 2JA5K 5FLMK 4J3NA 1Y1WK 3GTMA 3SZYA 4GTAA 1BS2A 3GTOC 2ZUEA 3GTGA 1VJEA 1B4BA 4KDDA 2O5IA 4BBRK 1TWAA 3HKZD 3M4OK 3IPJA 2WAQD 2V6SA 1Y1VK 1XXCA 1IBAA 5C3EK 4GT9A 4GTLA 5EGHA 4BLBA 4PAAA 2E2IK 4BY1K 4MEXA 2NVTC 2R93A 2Y0SD 1XZQA 1WQHA 4XSXA 4C45A 5M5WK 3GTPK 1R9TK 3GTMC 5EGEA 1WIHA 1UV7A 1C0AA 3GTGC 2YU9K 1DCOA 1WSVA 3FKIK 3L4JA 3GTOK 3AD7C 1RU0A 3T01A 3QX3A 4IO9S 2KXYA 1BDFA 2RGRA 3S1MK 3S17K 2XCQA 3N0CA 4Y52C 4WFAS 3OPFA 1I3QC 2JA7A 3TFHA 4A3IC 3JSTA 4A3MC 5IYDC 3NUHA 4A3CK 5C44K 3T02A 3MMLB 1BGWA 5DM7S 4G0VA 3RZDC 3HOVC 4A3GC 2R7ZA 2NVXA 3N3YA 2R93C 3I4NK 1JVIA 1GE9A 3H0GA 1USMA 3S1RC 1FEUA 5M5XK 3BUEA 1IW7A 3HOWK 5TMFA 4A3LC 1VLOA 4KC6A 3I4MK 1I50A 1O24A 3GTGK 1K83A 4LJZA 2O5JA 1TWCC 1TWAK 4G0WA 3L4KA 4QIWD 4QJVB 3PIPS 1JOEA 2A6HA 2JA7C 5C4XK 4X6AK 4Y52K 3AH5A 4A3FC 5HL7S 4GTEA 4WJ4A 3AD9C 3DLLS 4A3MK 2NVXC 1O2FB 3OEPA 4C3IK 3GTQA 2PPBA 3VA7A 4GFQA 3G4AA 1O2AA 3H0GC 4U67S 4NOIA 3S2DK 1TWGA 1EI6A 4GTBA 4A3LK 1KQ4A 3GEIA 3S15C 5CHPA 4BXXC 1I6VA 4FM9A 2JA8C 1J98A 3GTJA 4RMFA 3Q3QA 5JVHS 1EK8A 4BKWA 5FJ8K 2A68A 2ZJQS 2VUMC 2JA7K 2KQ1A 1VGXA 4WJ3M 2ZJRS 1J6XA 3M3YC 2R7ZK 4C3HC 1EFWA 4KARA 2NVXK 1HI9A 3GIRA 4Y7NC 1WSRA 3CQZC 1TWGC 1IQ0A 5IOSA 4FZBA 3LAJA 1O27A 2FQTA 2NVYA 1ZBSA 1I50K 1O25A 1K83K 1WCMC 1BJTA 2PA8L 4BXXK 3GTJC 1I3QA 4A3KC 1EQRA 5IP7C 5CJ9A 3S2HK 4BY7C 3DXJA 2GSOA 2R92C 4IOCS 2A69A 2PMZL 2V6UA 1IS1A 2WB1D 3HXAA 2JA6A 3M3YK 1B4AA 3GTQK 3V4GA 4KMDA 4KN4A 1F7UA 1TWGK 3WODA 4A3DC 2NVYC 3HOZC 2FQOA 1IE0A 1TWCA 3AD8C 4KB4A 4LLGA 2B63C 3H3VL 3HOXC 3GDZA 4YG2A 3GTJK 2BE5A 5D4DA 2P8TA 4Q5SA 2PHCB 3S16C 1O28A 5M3MK 4A93C 3GTKC 2CFAA 5C4JC 2NVTK 2JA6C 1XPPA 4G7HA 4GTDA 3K7AC 5L46A 3GTMK 2WAQL 3FOEA 5E68A 4KAWX 2GAGC 2NVYK 2V6TA 1G51A 3EQLA 2E2JC 3HOZK 4KASA 3LAPA 3S1QC 4XLPA 4BBSC 5TJ3A 1F7VA 1Y1WA 1DCHA 2Y0SL 1VRQC 2GAHC 1I3QK 2VUMA 4KMAA 1I6HC 2E2HC 3LPXA 3BP3A 2L5NA 4A3IK 4AH6A 5IYDK 3S16K 3RZDK 3HOVK 2CW0A 3PO3C 4A3GK 3OREA 2R93K 1USOA 3CQZA 2JA6K 3S1RK 3FOFA 3K7AK 1TWHC 1O29A 4PABA 3A8IA 1XZPA 4P5AA 5HL8A 1PJ7A 4AYBL 4KM8A 1WCMA 4C3JC 1ZVUA 2ZFZA 4KB2A 1TWCK 2E2JK 2NVQC 3GTPA 2JA5C 5FLMC 1Y1WC 4ZH4A 4M1XA 4OIOA 4WF9S 1PJ5A 1WOSA 2W7VA 1XXBA 1SFOA 3FHZA 1ZQ1C 2GSUA 4A3FK 3S1NC 1INNA 2R92A 4GZYA 4BBRC 4A3BC 3GEHA 3M4OC 1Y1VC 3H0GK 2Y3PA 4P9SA 5C3EC 1YCLA 3TFJA 3RZOC 4ILDA 4XCHA 4MEYA 3ERED 4QIWL 2E2IC 1WORA 3GTLA 3S15K 1DCPA 1SMYA 5DM6S 4GTFA 2B63A 2JA8K 2GSNA 3GTPC 3TTGA 3A8KA 1R9TC 2KPUA 5IYBC 2NVQK 1WOPA 1WQGA 1SFOC 2YU9C 3G4CA 3FKIC 2VUMK 3GTKA 1JQWA 1TWFA 5JFEA 3S1NK 4LQYA 2P5MA 4MQ9A 3S1MC 1J6VA 3CAGA 4OIQA 4G7OA 3S17C 4A3BK 4LR2A 4C3HK 1YX2A 4Y7NK 4Q4ZA 3CQZK 1AB4A 4YFNA 3RZOK 1X31C 4A3CC 1ZXOA 5C44C 3GEEA 4KMHA 3GTLC 3I4NC 1WCMK 4DDQA 1F9NA 4BLAA 3AQOA 3N0BA 3HOWC 2XCOA 2E2HA 4A3KK 4A3EC 5IYBK 5IP7K 3I4MC 1XZQB 3SZZA 4BY7K 1SFOK 4YFKA 1TWFC 4GTCA 5IOTA 2R92K 5IYCC 4LOWA 2KWAA 1VH2A 1F93A 1TWAC 4YFXA 4C2MC 3PIOS 1J6WA 5M3FK 1WQFA 1TWHA 3HKZL 2JH3A 1WOOA 4X6AC 5C4XC 4AYBD 4LK1A 4KMUA 3PO2C 4WFNS 3T00A 4A3DK 1YNJA 3S14C 4QJVA 1IL2A 3GTLK 4C3IC 2ZJPS 1V5VA 2JA5A 3GSIA 2ZUFA 5JVOA 2B63K 3HOXK 2WB1L 3S2DC 2CFAB 2A6EA 4WFBS 4A3EK 1YNNA 3TFIA 4KN7A 4OINA 4A3JC 4A93K 3GTKK 1TWFK 3HOUC 5C4JK 5IP9C 4G7ZA 1Y1VA 2XCRB 5IYCK 1EH1A 3LYWA 5HQHA 4C2MK 2E2IA 4JK1A 1HQMA 3PO2K 5TMCA 2PA8D 1ZYRA 3BP8C 3HOYC 3S14K 3A8JA 4XSZA 2R7ZC 3S0XA 1R9TA 1PJ6A 3S1QK 4BBSK 2YU9A 3FKIA 3GTOA 4WCES 1I6HK 1DD5A 2E2HK 2PMZD 1O26A 3AQPA 1I50C 1K83C 4IOAS 4A3JK 3PO3K 3HOUK 1XZPB 4WILA 5IP9K 5M5YK 5JVGS 4G0UA 4OIPA 4P5BA 5IOQA 4XLNA 1TWHK 3S2HC
chains in the Genus database with same CATH topology
4A3MK 2JA6C 4Y7NK 4Q4ZA 4BY1C 4G7HA 1XPPA 3K7AC 3CQZK 2NVXC 4YFNA 4C3IK 3RZOK 2PPBA 4A3CC 3H3VD 4LK0A 4OIRA 5C44C 4C3JK 3H0GC 2WAQL 3GTMK 3GTLC 3HOYK 4NOIA 3S2DK 3GTQC 2JA5K 5FLMK 3I4NC 1WCMK 1Y1WK 4A3LK 2NVYK 3EQLA 2E2JC 3HOZK 3S15C 3GTOC 3HOWC 3S1QC 4XLPA 4BBSC 2O5IA 4A3EC 5IYBK 4BXXC 4A3KK 5IP7K 1I6VA 5M3MK 2JA8C 3I4MC 4BY7K 1SFOK 4YFKA 2Y0SL 4BBRK 1TWFC 1I3QK 1I6HC 2E2HC 3HKZD 3M4OK 2WAQD 4A3IK 5FJ8K 2R92K 2A68A 5IYCC 5IYDK 1Y1VK 3S16K 1TWAC 4YFXA 2VUMC 5C3EK 2JA7K 3RZDK 4C2MC 3HOVK 2CW0A 3PO3C 5M3FK 4A3GK 3HKZL 2R93K 4X6AC 5C4XC 4AYBD 4LK1A 2JA6K 2E2IK 3S1RK 3M3YC 4KMUA 3PO2C 3K7AK 4MEXA 1TWHC 4C3HC 2NVTC 2NVXK 4BY1K 2R7ZK 4A3DK 1YNJA 3S14C 4Y7NC 4QJVA 3CQZC 2Y0SD 4AYBL 1TWGC 3GTLK 4XSXA 4C3IC 5M5WK 3GTPK 1R9TK 3GTMC 4C3JC 2B63K 3HOXK 3GTGC 2YU9K 2WB1L 3S2DC 1I50K 1TWCK 2E2JK 2NVQC 2JA5C 1K83K 5FLMC 1WCMC 2A6EA 1Y1WC 3FKIK 3GTOK 4ZH4A 4C3HK 4OIOA 2PA8L 4A3EK 1YNNA 4BXXK 3GTJC 4KN7A 4OINA 1BDFA 3S1MK 4A3JC 4A93K 3GTKK 1TWFK 3S17K 4A3KC 3HOUC 4A3FK 5C4JK 5IP9C 5IP7C 3S1NC 4G7ZA 3S2HK 4BY7C 4GZYA 4Y52C 5IYCK 4BBRC 1I3QC 4A3BC 3DXJA 3M4OC 4A3IC 4C2MK 4A3MC 5IYDC 2R92C 4A3CK 1Y1VC 2A69A 2PMZL 3H0GK 2WB1D 5C44K 5C3EC 3RZDC 3HOVC 4A3GC 4JK1A 3RZOC 1HQMA 3PO2K 3GTQK 5TMCA 3M3YK 4MEYA 2PA8D 2R93C 1ZYRA 3I4NK 4QIWL 4KN4A 3HOYC 3S14K 2E2IC 3S1RC 4XSZA 2R7ZC 5M5XK 3S15K 1IW7A 1TWGK 3WODA 3HOWK 4A3DC 5TMFA 4A3LC 3S1QK 4BBSK 2NVYC 1SMYA 3HOZC 2JA8K 3I4MK 3GTPC 3GTGK 1R9TC 2NVQK 5IYBC 4LJZA 1I6HK 2E2HK 4LLGA 2PMZD 2B63C 3H3VL 3HOXC 1SFOC 2YU9C 2O5JA 1I50C 1TWCC 4YG2A 3GTJK 1K83C 3FKIC 1TWAK 2VUMK 4A3JK 2BE5A 5D4DA 3PO3K 4X6AK 4QIWD 3HOUK 4Q5SA 4QJVB 5IP9K 5M5YK 3S1NK 3S16C 4OIPA 2A6HA 4MQ9A 2JA7C 3S1MC 4OIQA 4A93C 3GTKC 4G7OA 3S17C 5C4XK 4A3BK 4A3FC 4Y52K 4XLNA 5C4JC 1TWHK 2NVTK 3S2HC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A3M K;  2JA6 C;  4Y7N K;  4Q4Z A;  4BY1 C;  4G7H A;  1XPP A;  3K7A C;  3CQZ K;  2NVX C;  4YFN A;  4C3I K;  3RZO K;  2PPB A;  4A3C C;  3H3V D;  4LK0 A;  4OIR A;  5C44 C;  4C3J K;  3H0G C;  2WAQ L;  3GTM K;  3GTL C;  3HOY K;  4NOI A;  3S2D K;  3GTQ C;  2JA5 K;  5FLM K;  3I4N C;  1WCM K;  1Y1W K;  4A3L K;  2NVY K;  3EQL A;  2E2J C;  3HOZ K;  3S15 C;  3GTO C;  3HOW C;  3S1Q C;  4XLP A;  4BBS C;  2O5I A;  4A3E C;  5IYB K;  4BXX C;  4A3K K;  5IP7 K;  1I6V A;  5M3M K;  2JA8 C;  3I4M C;  4BY7 K;  1SFO K;  4YFK A;  2Y0S L;  4BBR K;  1TWF C;  1I3Q K;  1I6H C;  2E2H C;  3HKZ D;  3M4O K;  2WAQ D;  4A3I K;  5FJ8 K;  2R92 K;  2A68 A;  5IYC C;  5IYD K;  1Y1V K;  3S16 K;  1TWA C;  4YFX A;  2VUM C;  5C3E K;  2JA7 K;  3RZD K;  4C2M C;  3HOV K;  2CW0 A;  3PO3 C;  5M3F K;  4A3G K;  3HKZ L;  2R93 K;  4X6A C;  5C4X C;  4AYB D;  4LK1 A;  2JA6 K;  2E2I K;  3S1R K;  3M3Y C;  4KMU A;  3PO2 C;  3K7A K;  4MEX A;  1TWH C;  4C3H C;  2NVT C;  2NVX K;  4BY1 K;  2R7Z K;  4A3D K;  1YNJ A;  3S14 C;  4Y7N C;  4QJV A;  3CQZ C;  2Y0S D;  4AYB L;  1TWG C;  3GTL K;  4XSX A;  4C3I C;  5M5W K;  3GTP K;  1R9T K;  3GTM C;  4C3J C;  2B63 K;  3HOX K;  3GTG C;  2YU9 K;  2WB1 L;  3S2D C;  1I50 K;  1TWC K;  2E2J K;  2NVQ C;  2JA5 C;  1K83 K;  5FLM C;  1WCM C;  2A6E A;  1Y1W C;  3FKI K;  3GTO K;  4ZH4 A;  4C3H K;  4OIO A;  2PA8 L;  4A3E K;  1YNN A;  4BXX K;  3GTJ C;  4KN7 A;  4OIN A;  1BDF A;  3S1M K;  4A3J C;  4A93 K;  3GTK K;  1TWF K;  3S17 K;  4A3K C;  3HOU C;  4A3F K;  5C4J K;  5IP9 C;  5IP7 C;  3S1N C;  4G7Z A;  3S2H K;  4BY7 C;  4GZY A;  4Y52 C;  5IYC K;  4BBR C;  1I3Q C;  4A3B C;  3DXJ A;  3M4O C;  4A3I C;  4C2M K;  4A3M C;  5IYD C;  2R92 C;  4A3C K;  1Y1V C;  2A69 A;  2PMZ L;  3H0G K;  2WB1 D;  5C44 K;  5C3E C;  3RZD C;  3HOV C;  4A3G C;  4JK1 A;  3RZO C;  1HQM A;  3PO2 K;  3GTQ K;  5TMC A;  3M3Y K;  4MEY A;  2PA8 D;  2R93 C;  1ZYR A;  3I4N K;  4QIW L;  4KN4 A;  3HOY C;  3S14 K;  2E2I C;  3S1R C;  4XSZ A;  2R7Z C;  5M5X K;  3S15 K;  1IW7 A;  1TWG K;  3WOD A;  3HOW K;  4A3D C;  5TMF A;  4A3L C;  3S1Q K;  4BBS K;  2NVY C;  1SMY A;  3HOZ C;  2JA8 K;  3I4M K;  3GTP C;  3GTG K;  1R9T C;  2NVQ K;  5IYB C;  4LJZ A;  1I6H K;  2E2H K;  4LLG A;  2PMZ D;  2B63 C;  3H3V L;  3HOX C;  1SFO C;  2YU9 C;  2O5J A;  1I50 C;  1TWC C;  4YG2 A;  3GTJ K;  1K83 C;  3FKI C;  1TWA K;  2VUM K;  4A3J K;  2BE5 A;  5D4D A;  3PO3 K;  4X6A K;  4QIW D;  3HOU K;  4Q5S A;  4QJV B;  5IP9 K;  5M5Y K;  3S1N K;  3S16 C;  4OIP A;  2A6H A;  4MQ9 A;  2JA7 C;  3S1M C;  4OIQ A;  4A93 C;  3GTK C;  4G7O A;  3S17 C;  5C4X K;  4A3B K;  4A3F C;  4Y52 K;  4XLN A;  5C4J C;  1TWH K;  2NVT K;  3S2H C; 
#chains in the Genus database with same CATH topology
 1XXA A;  2D6F C;  3CF5 S;  4BY1 C;  3ADA C;  2L3U A;  2EBB A;  1L0W A;  1ISE A;  4KAT A;  3H3V D;  4LK0 A;  4OIR A;  2RH6 A;  4C3J K;  1O2B A;  5IOR A;  3HOY K;  4O2D A;  3GTQ C;  4KM9 A;  2JA5 K;  5FLM K;  4J3N A;  1Y1W K;  3GTM A;  3SZY A;  4GTA A;  1BS2 A;  3GTO C;  2ZUE A;  3GTG A;  1VJE A;  1B4B A;  4KDD A;  2O5I A;  4BBR K;  1TWA A;  3HKZ D;  3M4O K;  3IPJ A;  2WAQ D;  2V6S A;  1Y1V K;  1XXC A;  1IBA A;  5C3E K;  4GT9 A;  4GTL A;  5EGH A;  4BLB A;  4PAA A;  2E2I K;  4BY1 K;  4MEX A;  2NVT C;  2R93 A;  2Y0S D;  1XZQ A;  1WQH A;  4XSX A;  4C45 A;  5M5W K;  3GTP K;  1R9T K;  3GTM C;  5EGE A;  1WIH A;  1UV7 A;  1C0A A;  3GTG C;  2YU9 K;  1DCO A;  1WSV A;  3FKI K;  3L4J A;  3GTO K;  3AD7 C;  1RU0 A;  3T01 A;  3QX3 A;  4IO9 S;  2KXY A;  1BDF A;  2RGR A;  3S1M K;  3S17 K;  2XCQ A;  3N0C A;  4Y52 C;  4WFA S;  3OPF A;  1I3Q C;  2JA7 A;  3TFH A;  4A3I C;  3JST A;  4A3M C;  5IYD C;  3NUH A;  4A3C K;  5C44 K;  3T02 A;  3MML B;  1BGW A;  5DM7 S;  4G0V A;  3RZD C;  3HOV C;  4A3G C;  2R7Z A;  2NVX A;  3N3Y A;  2R93 C;  3I4N K;  1JVI A;  1GE9 A;  3H0G A;  1USM A;  3S1R C;  1FEU A;  5M5X K;  3BUE A;  1IW7 A;  3HOW K;  5TMF A;  4A3L C;  1VLO A;  4KC6 A;  3I4M K;  1I50 A;  1O24 A;  3GTG K;  1K83 A;  4LJZ A;  2O5J A;  1TWC C;  1TWA K;  4G0W A;  3L4K A;  4QIW D;  4QJV B;  3PIP S;  1JOE A;  2A6H A;  2JA7 C;  5C4X K;  4X6A K;  4Y52 K;  3AH5 A;  4A3F C;  5HL7 S;  4GTE A;  4WJ4 A;  3AD9 C;  3DLL S;  4A3M K;  2NVX C;  1O2F B;  3OEP A;  4C3I K;  3GTQ A;  2PPB A;  3VA7 A;  4GFQ A;  3G4A A;  1O2A A;  3H0G C;  4U67 S;  4NOI A;  3S2D K;  1TWG A;  1EI6 A;  4GTB A;  4A3L K;  1KQ4 A;  3GEI A;  3S15 C;  5CHP A;  4BXX C;  1I6V A;  4FM9 A;  2JA8 C;  1J98 A;  3GTJ A;  4RMF A;  3Q3Q A;  5JVH S;  1EK8 A;  4BKW A;  5FJ8 K;  2A68 A;  2ZJQ S;  2VUM C;  2JA7 K;  2KQ1 A;  1VGX A;  4WJ3 M;  2ZJR S;  1J6X A;  3M3Y C;  2R7Z K;  4C3H C;  1EFW A;  4KAR A;  2NVX K;  1HI9 A;  3GIR A;  4Y7N C;  1WSR A;  3CQZ C;  1TWG C;  1IQ0 A;  5IOS A;  4FZB A;  3LAJ A;  1O27 A;  2FQT A;  2NVY A;  1ZBS A;  1I50 K;  1O25 A;  1K83 K;  1WCM C;  1BJT A;  2PA8 L;  4BXX K;  3GTJ C;  1I3Q A;  4A3K C;  1EQR A;  5IP7 C;  5CJ9 A;  3S2H K;  4BY7 C;  3DXJ A;  2GSO A;  2R92 C;  4IOC S;  2A69 A;  2PMZ L;  2V6U A;  1IS1 A;  2WB1 D;  3HXA A;  2JA6 A;  3M3Y K;  1B4A A;  3GTQ K;  3V4G A;  4KMD A;  4KN4 A;  1F7U A;  1TWG K;  3WOD A;  4A3D C;  2NVY C;  3HOZ C;  2FQO A;  1IE0 A;  1TWC A;  3AD8 C;  4KB4 A;  4LLG A;  2B63 C;  3H3V L;  3HOX C;  3GDZ A;  4YG2 A;  3GTJ K;  2BE5 A;  5D4D A;  2P8T A;  4Q5S A;  2PHC B;  3S16 C;  1O28 A;  5M3M K;  4A93 C;  3GTK C;  2CFA A;  5C4J C;  2NVT K;  2JA6 C;  1XPP A;  4G7H A;  4GTD A;  3K7A C;  5L46 A;  3GTM K;  2WAQ L;  3FOE A;  5E68 A;  4KAW X;  2GAG C;  2NVY K;  2V6T A;  1G51 A;  3EQL A;  2E2J C;  3HOZ K;  4KAS A;  3LAP A;  3S1Q C;  4XLP A;  4BBS C;  5TJ3 A;  1F7V A;  1Y1W A;  1DCH A;  2Y0S L;  1VRQ C;  2GAH C;  1I3Q K;  2VUM A;  4KMA A;  1I6H C;  2E2H C;  3LPX A;  3BP3 A;  2L5N A;  4A3I K;  4AH6 A;  5IYD K;  3S16 K;  3RZD K;  3HOV K;  2CW0 A;  3PO3 C;  4A3G K;  3ORE A;  2R93 K;  1USO A;  3CQZ A;  2JA6 K;  3S1R K;  3FOF A;  3K7A K;  1TWH C;  1O29 A;  4PAB A;  3A8I A;  1XZP A;  4P5A A;  5HL8 A;  1PJ7 A;  4AYB L;  4KM8 A;  1WCM A;  4C3J C;  1ZVU A;  2ZFZ A;  4KB2 A;  1TWC K;  2E2J K;  2NVQ C;  3GTP A;  2JA5 C;  5FLM C;  1Y1W C;  4ZH4 A;  4M1X A;  4OIO A;  4WF9 S;  1PJ5 A;  1WOS A;  2W7V A;  1XXB A;  1SFO A;  3FHZ A;  1ZQ1 C;  2GSU A;  4A3F K;  3S1N C;  1INN A;  2R92 A;  4GZY A;  4BBR C;  4A3B C;  3GEH A;  3M4O C;  1Y1V C;  3H0G K;  2Y3P A;  4P9S A;  5C3E C;  1YCL A;  3TFJ A;  3RZO C;  4ILD A;  4XCH A;  4MEY A;  3ERE D;  4QIW L;  2E2I C;  1WOR A;  3GTL A;  3S15 K;  1DCP A;  1SMY A;  5DM6 S;  4GTF A;  2B63 A;  2JA8 K;  2GSN A;  3GTP C;  3TTG A;  3A8K A;  1R9T C;  2KPU A;  5IYB C;  2NVQ K;  1WOP A;  1WQG A;  1SFO C;  2YU9 C;  3G4C A;  3FKI C;  2VUM K;  3GTK A;  1JQW A;  1TWF A;  5JFE A;  3S1N K;  4LQY A;  2P5M A;  4MQ9 A;  3S1M C;  1J6V A;  3CAG A;  4OIQ A;  4G7O A;  3S17 C;  4A3B K;  4LR2 A;  4C3H K;  1YX2 A;  4Y7N K;  4Q4Z A;  3CQZ K;  1AB4 A;  4YFN A;  3RZO K;  1X31 C;  4A3C C;  1ZXO A;  5C44 C;  3GEE A;  4KMH A;  3GTL C;  3I4N C;  1WCM K;  4DDQ A;  1F9N A;  4BLA A;  3AQO A;  3N0B A;  3HOW C;  2XCO A;  2E2H A;  4A3K K;  4A3E C;  5IYB K;  5IP7 K;  3I4M C;  1XZQ B;  3SZZ A;  4BY7 K;  1SFO K;  4YFK A;  1TWF C;  4GTC A;  5IOT A;  2R92 K;  5IYC C;  4LOW A;  2KWA A;  1VH2 A;  1F93 A;  1TWA C;  4YFX A;  4C2M C;  3PIO S;  1J6W A;  5M3F K;  1WQF A;  1TWH A;  3HKZ L;  2JH3 A;  1WOO A;  4X6A C;  5C4X C;  4AYB D;  4LK1 A;  4KMU A;  3PO2 C;  4WFN S;  3T00 A;  4A3D K;  1YNJ A;  3S14 C;  4QJV A;  1IL2 A;  3GTL K;  4C3I C;  2ZJP S;  1V5V A;  2JA5 A;  3GSI A;  2ZUF A;  5JVO A;  2B63 K;  3HOX K;  2WB1 L;  3S2D C;  2CFA B;  2A6E A;  4WFB S;  4A3E K;  1YNN A;  3TFI A;  4KN7 A;  4OIN A;  4A3J C;  4A93 K;  3GTK K;  1TWF K;  3HOU C;  5C4J K;  5IP9 C;  4G7Z A;  1Y1V A;  2XCR B;  5IYC K;  1EH1 A;  3LYW A;  5HQH A;  4C2M K;  2E2I A;  4JK1 A;  1HQM A;  3PO2 K;  5TMC A;  2PA8 D;  1ZYR A;  3BP8 C;  3HOY C;  3S14 K;  3A8J A;  4XSZ A;  2R7Z C;  3S0X A;  1R9T A;  1PJ6 A;  3S1Q K;  4BBS K;  2YU9 A;  3FKI A;  3GTO A;  4WCE S;  1I6H K;  1DD5 A;  2E2H K;  2PMZ D;  1O26 A;  3AQP A;  1I50 C;  1K83 C;  4IOA S;  4A3J K;  3PO3 K;  3HOU K;  1XZP B;  4WIL A;  5IP9 K;  5M5Y K;  5JVG S;  4G0U A;  4OIP A;  4P5B A;  5IOQ A;  4XLN A;  1TWH K;  3S2H C; 
#chains in the Genus database with same CATH homology
 4A3M K;  2JA6 C;  4Y7N K;  4Q4Z A;  4BY1 C;  4G7H A;  1XPP A;  3K7A C;  3CQZ K;  2NVX C;  4YFN A;  4C3I K;  3RZO K;  2PPB A;  4A3C C;  3H3V D;  4LK0 A;  4OIR A;  5C44 C;  4C3J K;  3H0G C;  2WAQ L;  3GTM K;  3GTL C;  3HOY K;  4NOI A;  3S2D K;  3GTQ C;  2JA5 K;  5FLM K;  3I4N C;  1WCM K;  1Y1W K;  4A3L K;  2NVY K;  3EQL A;  2E2J C;  3HOZ K;  3S15 C;  3GTO C;  3HOW C;  3S1Q C;  4XLP A;  4BBS C;  2O5I A;  4A3E C;  5IYB K;  4BXX C;  4A3K K;  5IP7 K;  1I6V A;  5M3M K;  2JA8 C;  3I4M C;  4BY7 K;  1SFO K;  4YFK A;  2Y0S L;  4BBR K;  1TWF C;  1I3Q K;  1I6H C;  2E2H C;  3HKZ D;  3M4O K;  2WAQ D;  4A3I K;  5FJ8 K;  2R92 K;  2A68 A;  5IYC C;  5IYD K;  1Y1V K;  3S16 K;  1TWA C;  4YFX A;  2VUM C;  5C3E K;  2JA7 K;  3RZD K;  4C2M C;  3HOV K;  2CW0 A;  3PO3 C;  5M3F K;  4A3G K;  3HKZ L;  2R93 K;  4X6A C;  5C4X C;  4AYB D;  4LK1 A;  2JA6 K;  2E2I K;  3S1R K;  3M3Y C;  4KMU A;  3PO2 C;  3K7A K;  4MEX A;  1TWH C;  4C3H C;  2NVT C;  2NVX K;  4BY1 K;  2R7Z K;  4A3D K;  1YNJ A;  3S14 C;  4Y7N C;  4QJV A;  3CQZ C;  2Y0S D;  4AYB L;  1TWG C;  3GTL K;  4XSX A;  4C3I C;  5M5W K;  3GTP K;  1R9T K;  3GTM C;  4C3J C;  2B63 K;  3HOX K;  3GTG C;  2YU9 K;  2WB1 L;  3S2D C;  1I50 K;  1TWC K;  2E2J K;  2NVQ C;  2JA5 C;  1K83 K;  5FLM C;  1WCM C;  2A6E A;  1Y1W C;  3FKI K;  3GTO K;  4ZH4 A;  4C3H K;  4OIO A;  2PA8 L;  4A3E K;  1YNN A;  4BXX K;  3GTJ C;  4KN7 A;  4OIN A;  1BDF A;  3S1M K;  4A3J C;  4A93 K;  3GTK K;  1TWF K;  3S17 K;  4A3K C;  3HOU C;  4A3F K;  5C4J K;  5IP9 C;  5IP7 C;  3S1N C;  4G7Z A;  3S2H K;  4BY7 C;  4GZY A;  4Y52 C;  5IYC K;  4BBR C;  1I3Q C;  4A3B C;  3DXJ A;  3M4O C;  4A3I C;  4C2M K;  4A3M C;  5IYD C;  2R92 C;  4A3C K;  1Y1V C;  2A69 A;  2PMZ L;  3H0G K;  2WB1 D;  5C44 K;  5C3E C;  3RZD C;  3HOV C;  4A3G C;  4JK1 A;  3RZO C;  1HQM A;  3PO2 K;  3GTQ K;  5TMC A;  3M3Y K;  4MEY A;  2PA8 D;  2R93 C;  1ZYR A;  3I4N K;  4QIW L;  4KN4 A;  3HOY C;  3S14 K;  2E2I C;  3S1R C;  4XSZ A;  2R7Z C;  5M5X K;  3S15 K;  1IW7 A;  1TWG K;  3WOD A;  3HOW K;  4A3D C;  5TMF A;  4A3L C;  3S1Q K;  4BBS K;  2NVY C;  1SMY A;  3HOZ C;  2JA8 K;  3I4M K;  3GTP C;  3GTG K;  1R9T C;  2NVQ K;  5IYB C;  4LJZ A;  1I6H K;  2E2H K;  4LLG A;  2PMZ D;  2B63 C;  3H3V L;  3HOX C;  1SFO C;  2YU9 C;  2O5J A;  1I50 C;  1TWC C;  4YG2 A;  3GTJ K;  1K83 C;  3FKI C;  1TWA K;  2VUM K;  4A3J K;  2BE5 A;  5D4D A;  3PO3 K;  4X6A K;  4QIW D;  3HOU K;  4Q5S A;  4QJV B;  5IP9 K;  5M5Y K;  3S1N K;  3S16 C;  4OIP A;  2A6H A;  4MQ9 A;  2JA7 C;  3S1M C;  4OIQ A;  4A93 C;  3GTK C;  4G7O A;  3S17 C;  5C4X K;  4A3B K;  4A3F C;  4Y52 K;  4XLN A;  5C4J C;  1TWH K;  2NVT K;  3S2H C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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