2PPB | Genus

Total Genus 40

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	40
sequence length	229
structure length	229
Chain Sequence	MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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reading 229 atoms

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229 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase/dna/rna
publication title	Structural basis for substrate loading in bacterial RNA polymerase. pubmed doi rcsb
molecule keywords	DNA (5'-D(PCPCPCPTPGPTPCPTPGPGPCPGPTPTPCPGP*
total genus	40
structure length	229
sequence length	229
chains with identical sequence	B, K, L
ec nomenclature	ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date	2007-04-28

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
A	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain
A	PF03118	RNA_pol_A_CTD	Bacterial RNA polymerase, alpha chain C terminal domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	2ppbA02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	2ppbA01

4AYBD 4XLPA 4BXXC 5C44K 1Y1WK 3GTGC 1R9TK 2E2HK 4LJZA 5D4DA 5IYDK 5C44C 4QJVB 5M5YK 5C4JK 1Y1WC 1HQMA 1R9TC 4JK1A 4LK1A 2E2HC 3S17K 5IYDC 4BBSK 5C4JC 2A6EA 4A3KK 4X6AK 5FLMK 2E2JK 5IP7K 3K7AK 5M5XK 5IYCK 2R7ZK 3S17C 4BBSC 2E2IK 4A3CK 4A3KC 2VUMK 4X6AC 5FLMC 1YNNA 5IP7C 3K7AC 2E2JC 5IYCC 4YG2A 2R7ZC 4C3IK 2E2IC 4A3CC 3M3YK 2VUMC 4A3DK 4C3IC 2O5IA 2CW0A 3M3YC 1TWAK 3H3VL 3S1NK 4A3DC 4OIRA 5M5WK 1BDFA 1TWAC 3S1NC 1TWGK 4MEXA 3S1QK 3PO2K 2PMZL 1TWGC 3S15K 4OIOA 3S1QC 3GTMK 2NVTK 4LK0A 3PO2C 1I50K 3S15C 4C2MK 2JA5K 1I6VA 4A93K 3GTMC 2NVTC 3HOVK 1I50C 4C3HK 2PA8L 4QIWD 2YU9K 4A3BK 1ZYRA 4C2MC 2JA5C 2A69A 3H0GK 4A93C 4Q4ZA 3HOVC 2JA7K 4C3HC 2YU9C 3H3VD 4A3BC 3H0GC 5C4XK 4MEYA 1SFOK 2JA7C 3I4NK 3DXJA 5C4XC 3S2DK 2R92K 2PMZD 1SFOC 4KMUA 3HKZL 4G7ZA 3I4NC 3GTLK 4YFKA 2A6HA 4XLNA 3S2DC 2R92C 3GTLC 4G7OA 3GTKK 3GTOK 4OINA 4A3MK 3WODA 2PA8D 1Y1VK 3HOWK 3GTKC 3GTOC 2NVYK 4XSZA 3S16K 4A3MC 1I6HK 4KN4A 5C3EK 3HOYK 1Y1VC 3HOWC 2JA8K 4A3LK 1IW7A 2Y0SL 3M4OK 2NVYC 3S16C 3S1RK 4BY1K 5C3EC 3HOYC 4A3LC 2JA8C 1TWFK 2A68A 3M4OC 4BBRK 4A3EK 3HOZK 3S1RC 4BY1C 4A3FK 4C3JK 3S14K 1TWFC 4BBRC 4A3EC 3HOZC 5M3FK 4A3FC 5TMCA 2B63K 4C3JC 4G7HA 1TWHK 3S1MK 3S14C 2WB1L 5M3MK 2R93K 2B63C 1TWHC 1YNJA 2BE5A 3S1MC 4GZYA 3FKIK 4Y7NK 3CQZK 3EQLA 5IYBK 4KN7A 2R93C 3FKIC 4BY7K 2Y0SD 4Y7NC 5TMFA 1K83K 3I4MK 1TWCK 3PO3K 3CQZC 5IYBC 4YFXA 4A3IK 3GTPK 4Y52K 3GTQK 4NOIA 3I4MC 1K83C 3PO3C 4BY7C 1WCMK 1TWCC 2WAQL 4Y52C 4YFNA 3GTPC 4A3IC 4AYBL 2NVQK 3RZOK 4OIQA 2NVXK 3GTQC 1SMYA 1WCMC 4Q5SA 1I6HC 1XPPA 4A3JK 3HOXK 2JA6K 3HOUK 4OIPA 2NVQC 5IP9K 3GTJK 3RZOC 2NVXC 5FJ8K 4A3JC 2JA6C 2WB1D 3HOXC 3HOUC 4A3GK 4MQ9A 2O5JA 5IP9C 3HKZD 4XSXA 3GTJC 1I3QK 4QIWL 3S2HK 4A3GC 1I3QC 3RZDK 4QJVA 4ZH4A 3S2HC 2PPBA 4BXXK 3GTGK 3RZDC 2WAQD 4LLGA
chains in the Genus database with same CATH superfamily

4AYBD 4XLPA 4BXXC 3Q3QA 4LR2A 4G0WA 1USOA 4BBSK 1B4BA 5M5XK 1O24A 4O2DA 4IO9S 2VUMK 4X6AC 5FLMC 3K7AC 2E2IC 3IPJA 3M3YK 3FOEA 1EI6A 5IOQA 3LAPA 2ZUEA 1K83A 1DCHA 2CW0A 1TWAK 1WCMA 4KMDA 3S1NC 1TWGK 3N0BA 2NVXA 2JA6A 3A8KA 4ILDA 1J6VA 1I50C 4C3HK 2YU9K 1O2AA 4C2MC 1EK8A 1F93A 2JA7K 3T01A 4KARA 2JH3A 5C4XK 2V6TA 3T02A 1Y1WA 2R92K 2E2HA 1TWCA 1SFOC 4G7ZA 2A6HA 1WQGA 4LQYA 4A3MK 3WODA 2R7ZA 4PAAA 3HOWK 1WSRA 1XZQA 4KAWX 3S16K 4XSZA 3HOYK 1Y1VC 1WORA 1IW7A 2Y0SL 2NVYC 1I3QA 3S1RK 1XZQB 4BY1C 4FM9A 1TWFC 4A3EC 3HOZC 5M3FK 2B63K 1TWHK 3S1MK 3PIOS 3S14C 3DLLS 2GSUA 2KPUA 1ZVUA 2JA5A 1K83K 3CQZC 4A3IK 4BY7C 1WCMK 1I6HK 3PO3C 3FOFA 1TWCC 1ZXOA 2VUMA 4AYBL 1V5VA 2NVXK 1VH2A 2JA6K 1J6WA 5IP9K 3HXAA 4KM8A 3RZOC 3GIRA 3L4KA 1F7VA 3GTLA 4A3GK 1XZPA 3CAGA 1IQ0A 5EGEA 3S2HK 1O2BA 3GTKA 2P8TA 3GTOA 5DM7S 1I3QC 3SZYA 4QJVA 4ZH4A 3RZDC 1XZPB 1GE9A 3FHZA 5C44K 1Y1WK 1BJTA 2E2HK 5IYDK 4QJVB 1BGWA 5C4JK 1YCLA 5JFEA 2A6EA 4A3KK 5IP7K 3LYWA 2R7ZK 4BBSC 2R93A 4IOCS 4C3IK 3G4AA 5L46A 2VUMC 1XXCA 3ERED 1JOEA 2O5IA 3M3YC 3GEEA 3OEPA 3GTQA 2PHCB 5M5WK 3QX3A 1TWAC 3S1QK 4WFBS 4WJ3M 1TWGC 3GEHA 3GTJA 1VLOA 4LK0A 2ZJPS 1EH1A 2EBBA 1DCOA 2JA5K 3HOVK 4DDQA 3NUHA 2B63A 2A69A 1TWHA 4Q4ZA 1ZQ1C 4C3HC 2YU9C 1J6XA 3GTGA 2JA7C 2W7VA 3TFIA 1O2FB 5JVHS 5C4XC 1B4AA 2GAHC 1O29A 3GTLK 1XXAA 5DM6S 1DD5A 4XLNA 2R92C 3G4CA 1O26A 4G7OA 3GTKK 3GTOK 2PA8D 1WQHA 4A3MC 4KN4A 5C3EK 4A3LK 3HOWC 2JA8K 4C45A 3S16C 3HOYC 2ZUFA 1KQ4A 4BBRK 3S1RC 5TJ3A 4U67S 4G7HA 1EFWA 1HI9A 1L0WA 5M3MK 2R93K 2B63C 1TWHC 3S1MC 4GZYA 4Y7NK 3OPFA 5E68A 4KASA 3I4MK 4Y52K 3GTPK 3GTQK 4NOIA 1ISEA 1K83C 2NVQK 4YFNA 4A3IC 4A3JK 1WCMC 1XXBA 1I6HC 4OIPA 4GFQA 3GTJK 2NVXC 1O25A 2JA6C 5FJ8K 2WB1D 4GTDA 5IP9C 1IBAA 3TFHA 3AD8C 1G51A 4A3GC 2GSOA 1WIHA 1IL2A 3AD7C 3S2HC 2PPBA 3GTGK 2WAQD 4GTCA 1R9TK 4LJZA 4FZBA 5C44C 5M5YK 1Y1WC 1HQMA 2E2HC 3S17K 5IYDC 2FQTA 5C4JC 5HL8A 1O27A 2E2JK 5IYCK 1DCPA 4A3CK 2KQ1A 4A3KC 4G0UA 5IP7C 2R7ZC 4YG2A 3BP3A 4A3DK 4C3IC 1O28A 1VRQC 4J3NA 4KB4A 3N3YA 3CF5S 4OIRA 4BLAA 5JVOA 2L5NA 4GTLA 4WILA 4MEXA 3PO2K 3SZZA 1ZBSA 3S15K 5JVGS 4OIOA 3S1QC 3GTMK 1RU0A 2NVTK 4KB2A 4A93K 3LPXA 2PA8L 3AQPA 4KMAA 4A3BK 1ZYRA 2JA5C 3H0GK 5IOTA 4G0VA 3HOVC 4GTBA 3H3VD 2GSNA 4MEYA 1FEUA 4BLBA 3I4NK 3DXJA 3S2DK 4WCES 2PMZD 1VJEA 3GTPA 1X31C 1WOOA 2GAGC 3GTLC 4OINA 3S0XA 2Y3PA 3AD9C 4GTFA 2E2IA 3GTKC 3GTOC 1USMA 3M4OK 2ZJQS 5C3EC 4A3LC 5IOSA 2JA8C 4RMFA 2A68A 4A3FK 4C3JK 4BBRC 5TMCA 3N0CA 2WB1L 4KATA 1R9TA 4KC6A 3FKIK 1YNJA 2BE5A 3T00A 5IYBK 3EQLA 1J98A 2R93C 2KXYA 4WF9S 3A8IA 3GEIA 4Y7NC 5TMFA 1BS2A 4P9SA 3I4MC 2WAQL 4GT9A 4AH6A 4Y52C 3GTPC 3GTQC 2XCOA 1SFOA 4XCHA 3HOXK 3HOUK 2NVQC 1WOSA 3AQOA 3TTGA 4A3JC 4MQ9A 2O5JA 3BP8C 4QIWL 3GTJC 1IS1A 4GTEA 1IE0A 4M1XA 1Y1VA 4BXXK 2NVYA 4KMHA 3GTMA 2RGRA 4LLGA 4KM9A 3GTGC 5EGHA 1TWFA 5D4DA 3H0GA 2V6UA 1R9TC 4JK1A 4LK1A 1JQWA 2RH6A 1PJ6A 4X6AK 1VGXA 4PABA 5FLMK 3K7AK 5HL7S 3S17C 2E2IK 1YNNA 2E2JC 5IYCC 3CQZA 4A3CC 1WOPA 3JSTA 3ADAC 2ZFZA 3H3VL 3S1NK 1F9NA 4A3DC 1BDFA 2PMZL 3VA7A 3A8JA 3LAJA 3PO2C 1AB4A 1I50K 2CFAA 2L3UA 3S15C 4C2MK 1I6VA 3GTMC 2NVTC 4QIWD 1WQFA 2KWAA 4A93C 2V6SA 1WSVA 4A3BC 2CFAB 3H0GC 1EQRA 3GDZA 3FKIA 1C0AA 4KDDA 1SFOK 3L4JA 2XCRB 5HQHA 4KMUA 3HKZL 3I4NC 4YFKA 2ZJRS 3S2DC 2XCQA 5IORA 4P5BA 1Y1VK 2FQOA 4WFAS 1PJ5A 2NVYK 4BY1K 3GSIA 1TWFK 3M4OC 1TWAA 4A3EK 3HOZK 1UV7A 3S14K 1TWGA 4IOAS 4A3FC 4C3JC 3AH5A 1YX2A 4BKWA 3CQZK 4KN7A 3FKIC 4BY7K 2Y0SD 1JVIA 2YU9A 3PO3K 1TWCK 5IYBC 4YFXA 5CJ9A 2JA7A 4P5AA 3TFJA 3RZOK 4OIQA 4Q5SA 1SMYA 1XPPA 3V4GA 2R92A 3PIPS 1F7UA 3HOXC 3HOUC 3BUEA 4GTAA 3HKZD 4XSXA 1I3QK 4LOWA 3OREA 5CHPA 3MMLB 2P5MA 1INNA 4WFNS 4WJ4A 3RZDK 2D6FC 1PJ7A 1I50A
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 4AYB D;  4XLP A;  4BXX C;  5C44 K;  1Y1W K;  3GTG C;  1R9T K;  2E2H K;  4LJZ A;  5D4D A;  5IYD K;  5C44 C;  4QJV B;  5M5Y K;  5C4J K;  1Y1W C;  1HQM A;  1R9T C;  4JK1 A;  4LK1 A;  2E2H C;  3S17 K;  5IYD C;  4BBS K;  5C4J C;  2A6E A;  4A3K K;  4X6A K;  5FLM K;  2E2J K;  5IP7 K;  3K7A K;  5M5X K;  5IYC K;  2R7Z K;  3S17 C;  4BBS C;  2E2I K;  4A3C K;  4A3K C;  2VUM K;  4X6A C;  5FLM C;  1YNN A;  5IP7 C;  3K7A C;  2E2J C;  5IYC C;  4YG2 A;  2R7Z C;  4C3I K;  2E2I C;  4A3C C;  3M3Y K;  2VUM C;  4A3D K;  4C3I C;  2O5I A;  2CW0 A;  3M3Y C;  1TWA K;  3H3V L;  3S1N K;  4A3D C;  4OIR A;  5M5W K;  1BDF A;  1TWA C;  3S1N C;  1TWG K;  4MEX A;  3S1Q K;  3PO2 K;  2PMZ L;  1TWG C;  3S15 K;  4OIO A;  3S1Q C;  3GTM K;  2NVT K;  4LK0 A;  3PO2 C;  1I50 K;  3S15 C;  4C2M K;  2JA5 K;  1I6V A;  4A93 K;  3GTM C;  2NVT C;  3HOV K;  1I50 C;  4C3H K;  2PA8 L;  4QIW D;  2YU9 K;  4A3B K;  1ZYR A;  4C2M C;  2JA5 C;  2A69 A;  3H0G K;  4A93 C;  4Q4Z A;  3HOV C;  2JA7 K;  4C3H C;  2YU9 C;  3H3V D;  4A3B C;  3H0G C;  5C4X K;  4MEY A;  1SFO K;  2JA7 C;  3I4N K;  3DXJ A;  5C4X C;  3S2D K;  2R92 K;  2PMZ D;  1SFO C;  4KMU A;  3HKZ L;  4G7Z A;  3I4N C;  3GTL K;  4YFK A;  2A6H A;  4XLN A;  3S2D C;  2R92 C;  3GTL C;  4G7O A;  3GTK K;  3GTO K;  4OIN A;  4A3M K;  3WOD A;  2PA8 D;  1Y1V K;  3HOW K;  3GTK C;  3GTO C;  2NVY K;  4XSZ A;  3S16 K;  4A3M C;  1I6H K;  4KN4 A;  5C3E K;  3HOY K;  1Y1V C;  3HOW C;  2JA8 K;  4A3L K;  1IW7 A;  2Y0S L;  3M4O K;  2NVY C;  3S16 C;  3S1R K;  4BY1 K;  5C3E C;  3HOY C;  4A3L C;  2JA8 C;  1TWF K;  2A68 A;  3M4O C;  4BBR K;  4A3E K;  3HOZ K;  3S1R C;  4BY1 C;  4A3F K;  4C3J K;  3S14 K;  1TWF C;  4BBR C;  4A3E C;  3HOZ C;  5M3F K;  4A3F C;  5TMC A;  2B63 K;  4C3J C;  4G7H A;  1TWH K;  3S1M K;  3S14 C;  2WB1 L;  5M3M K;  2R93 K;  2B63 C;  1TWH C;  1YNJ A;  2BE5 A;  3S1M C;  4GZY A;  3FKI K;  4Y7N K;  3CQZ K;  3EQL A;  5IYB K;  4KN7 A;  2R93 C;  3FKI C;  4BY7 K;  2Y0S D;  4Y7N C;  5TMF A;  1K83 K;  3I4M K;  1TWC K;  3PO3 K;  3CQZ C;  5IYB C;  4YFX A;  4A3I K;  3GTP K;  4Y52 K;  3GTQ K;  4NOI A;  3I4M C;  1K83 C;  3PO3 C;  4BY7 C;  1WCM K;  1TWC C;  2WAQ L;  4Y52 C;  4YFN A;  3GTP C;  4A3I C;  4AYB L;  2NVQ K;  3RZO K;  4OIQ A;  2NVX K;  3GTQ C;  1SMY A;  1WCM C;  4Q5S A;  1I6H C;  1XPP A;  4A3J K;  3HOX K;  2JA6 K;  3HOU K;  4OIP A;  2NVQ C;  5IP9 K;  3GTJ K;  3RZO C;  2NVX C;  5FJ8 K;  4A3J C;  2JA6 C;  2WB1 D;  3HOX C;  3HOU C;  4A3G K;  4MQ9 A;  2O5J A;  5IP9 C;  3HKZ D;  4XSX A;  3GTJ C;  1I3Q K;  4QIW L;  3S2H K;  4A3G C;  1I3Q C;  3RZD K;  4QJV A;  4ZH4 A;  3S2H C;  2PPB A;  4BXX K;  3GTG K;  3RZD C;  2WAQ D;  4LLG A; 
#chains in the Genus database with same CATH topology
 4AYB D;  4XLP A;  4BXX C;  3Q3Q A;  4LR2 A;  4G0W A;  1USO A;  4BBS K;  1B4B A;  5M5X K;  1O24 A;  4O2D A;  4IO9 S;  2VUM K;  4X6A C;  5FLM C;  3K7A C;  2E2I C;  3IPJ A;  3M3Y K;  3FOE A;  1EI6 A;  5IOQ A;  3LAP A;  2ZUE A;  1K83 A;  1DCH A;  2CW0 A;  1TWA K;  1WCM A;  4KMD A;  3S1N C;  1TWG K;  3N0B A;  2NVX A;  2JA6 A;  3A8K A;  4ILD A;  1J6V A;  1I50 C;  4C3H K;  2YU9 K;  1O2A A;  4C2M C;  1EK8 A;  1F93 A;  2JA7 K;  3T01 A;  4KAR A;  2JH3 A;  5C4X K;  2V6T A;  3T02 A;  1Y1W A;  2R92 K;  2E2H A;  1TWC A;  1SFO C;  4G7Z A;  2A6H A;  1WQG A;  4LQY A;  4A3M K;  3WOD A;  2R7Z A;  4PAA A;  3HOW K;  1WSR A;  1XZQ A;  4KAW X;  3S16 K;  4XSZ A;  3HOY K;  1Y1V C;  1WOR A;  1IW7 A;  2Y0S L;  2NVY C;  1I3Q A;  3S1R K;  1XZQ B;  4BY1 C;  4FM9 A;  1TWF C;  4A3E C;  3HOZ C;  5M3F K;  2B63 K;  1TWH K;  3S1M K;  3PIO S;  3S14 C;  3DLL S;  2GSU A;  2KPU A;  1ZVU A;  2JA5 A;  1K83 K;  3CQZ C;  4A3I K;  4BY7 C;  1WCM K;  1I6H K;  3PO3 C;  3FOF A;  1TWC C;  1ZXO A;  2VUM A;  4AYB L;  1V5V A;  2NVX K;  1VH2 A;  2JA6 K;  1J6W A;  5IP9 K;  3HXA A;  4KM8 A;  3RZO C;  3GIR A;  3L4K A;  1F7V A;  3GTL A;  4A3G K;  1XZP A;  3CAG A;  1IQ0 A;  5EGE A;  3S2H K;  1O2B A;  3GTK A;  2P8T A;  3GTO A;  5DM7 S;  1I3Q C;  3SZY A;  4QJV A;  4ZH4 A;  3RZD C;  1XZP B;  1GE9 A;  3FHZ A;  5C44 K;  1Y1W K;  1BJT A;  2E2H K;  5IYD K;  4QJV B;  1BGW A;  5C4J K;  1YCL A;  5JFE A;  2A6E A;  4A3K K;  5IP7 K;  3LYW A;  2R7Z K;  4BBS C;  2R93 A;  4IOC S;  4C3I K;  3G4A A;  5L46 A;  2VUM C;  1XXC A;  3ERE D;  1JOE A;  2O5I A;  3M3Y C;  3GEE A;  3OEP A;  3GTQ A;  2PHC B;  5M5W K;  3QX3 A;  1TWA C;  3S1Q K;  4WFB S;  4WJ3 M;  1TWG C;  3GEH A;  3GTJ A;  1VLO A;  4LK0 A;  2ZJP S;  1EH1 A;  2EBB A;  1DCO A;  2JA5 K;  3HOV K;  4DDQ A;  3NUH A;  2B63 A;  2A69 A;  1TWH A;  4Q4Z A;  1ZQ1 C;  4C3H C;  2YU9 C;  1J6X A;  3GTG A;  2JA7 C;  2W7V A;  3TFI A;  1O2F B;  5JVH S;  5C4X C;  1B4A A;  2GAH C;  1O29 A;  3GTL K;  1XXA A;  5DM6 S;  1DD5 A;  4XLN A;  2R92 C;  3G4C A;  1O26 A;  4G7O A;  3GTK K;  3GTO K;  2PA8 D;  1WQH A;  4A3M C;  4KN4 A;  5C3E K;  4A3L K;  3HOW C;  2JA8 K;  4C45 A;  3S16 C;  3HOY C;  2ZUF A;  1KQ4 A;  4BBR K;  3S1R C;  5TJ3 A;  4U67 S;  4G7H A;  1EFW A;  1HI9 A;  1L0W A;  5M3M K;  2R93 K;  2B63 C;  1TWH C;  3S1M C;  4GZY A;  4Y7N K;  3OPF A;  5E68 A;  4KAS A;  3I4M K;  4Y52 K;  3GTP K;  3GTQ K;  4NOI A;  1ISE A;  1K83 C;  2NVQ K;  4YFN A;  4A3I C;  4A3J K;  1WCM C;  1XXB A;  1I6H C;  4OIP A;  4GFQ A;  3GTJ K;  2NVX C;  1O25 A;  2JA6 C;  5FJ8 K;  2WB1 D;  4GTD A;  5IP9 C;  1IBA A;  3TFH A;  3AD8 C;  1G51 A;  4A3G C;  2GSO A;  1WIH A;  1IL2 A;  3AD7 C;  3S2H C;  2PPB A;  3GTG K;  2WAQ D;  4GTC A;  1R9T K;  4LJZ A;  4FZB A;  5C44 C;  5M5Y K;  1Y1W C;  1HQM A;  2E2H C;  3S17 K;  5IYD C;  2FQT A;  5C4J C;  5HL8 A;  1O27 A;  2E2J K;  5IYC K;  1DCP A;  4A3C K;  2KQ1 A;  4A3K C;  4G0U A;  5IP7 C;  2R7Z C;  4YG2 A;  3BP3 A;  4A3D K;  4C3I C;  1O28 A;  1VRQ C;  4J3N A;  4KB4 A;  3N3Y A;  3CF5 S;  4OIR A;  4BLA A;  5JVO A;  2L5N A;  4GTL A;  4WIL A;  4MEX A;  3PO2 K;  3SZZ A;  1ZBS A;  3S15 K;  5JVG S;  4OIO A;  3S1Q C;  3GTM K;  1RU0 A;  2NVT K;  4KB2 A;  4A93 K;  3LPX A;  2PA8 L;  3AQP A;  4KMA A;  4A3B K;  1ZYR A;  2JA5 C;  3H0G K;  5IOT A;  4G0V A;  3HOV C;  4GTB A;  3H3V D;  2GSN A;  4MEY A;  1FEU A;  4BLB A;  3I4N K;  3DXJ A;  3S2D K;  4WCE S;  2PMZ D;  1VJE A;  3GTP A;  1X31 C;  1WOO A;  2GAG C;  3GTL C;  4OIN A;  3S0X A;  2Y3P A;  3AD9 C;  4GTF A;  2E2I A;  3GTK C;  3GTO C;  1USM A;  3M4O K;  2ZJQ S;  5C3E C;  4A3L C;  5IOS A;  2JA8 C;  4RMF A;  2A68 A;  4A3F K;  4C3J K;  4BBR C;  5TMC A;  3N0C A;  2WB1 L;  4KAT A;  1R9T A;  4KC6 A;  3FKI K;  1YNJ A;  2BE5 A;  3T00 A;  5IYB K;  3EQL A;  1J98 A;  2R93 C;  2KXY A;  4WF9 S;  3A8I A;  3GEI A;  4Y7N C;  5TMF A;  1BS2 A;  4P9S A;  3I4M C;  2WAQ L;  4GT9 A;  4AH6 A;  4Y52 C;  3GTP C;  3GTQ C;  2XCO A;  1SFO A;  4XCH A;  3HOX K;  3HOU K;  2NVQ C;  1WOS A;  3AQO A;  3TTG A;  4A3J C;  4MQ9 A;  2O5J A;  3BP8 C;  4QIW L;  3GTJ C;  1IS1 A;  4GTE A;  1IE0 A;  4M1X A;  1Y1V A;  4BXX K;  2NVY A;  4KMH A;  3GTM A;  2RGR A;  4LLG A;  4KM9 A;  3GTG C;  5EGH A;  1TWF A;  5D4D A;  3H0G A;  2V6U A;  1R9T C;  4JK1 A;  4LK1 A;  1JQW A;  2RH6 A;  1PJ6 A;  4X6A K;  1VGX A;  4PAB A;  5FLM K;  3K7A K;  5HL7 S;  3S17 C;  2E2I K;  1YNN A;  2E2J C;  5IYC C;  3CQZ A;  4A3C C;  1WOP A;  3JST A;  3ADA C;  2ZFZ A;  3H3V L;  3S1N K;  1F9N A;  4A3D C;  1BDF A;  2PMZ L;  3VA7 A;  3A8J A;  3LAJ A;  3PO2 C;  1AB4 A;  1I50 K;  2CFA A;  2L3U A;  3S15 C;  4C2M K;  1I6V A;  3GTM C;  2NVT C;  4QIW D;  1WQF A;  2KWA A;  4A93 C;  2V6S A;  1WSV A;  4A3B C;  2CFA B;  3H0G C;  1EQR A;  3GDZ A;  3FKI A;  1C0A A;  4KDD A;  1SFO K;  3L4J A;  2XCR B;  5HQH A;  4KMU A;  3HKZ L;  3I4N C;  4YFK A;  2ZJR S;  3S2D C;  2XCQ A;  5IOR A;  4P5B A;  1Y1V K;  2FQO A;  4WFA S;  1PJ5 A;  2NVY K;  4BY1 K;  3GSI A;  1TWF K;  3M4O C;  1TWA A;  4A3E K;  3HOZ K;  1UV7 A;  3S14 K;  1TWG A;  4IOA S;  4A3F C;  4C3J C;  3AH5 A;  1YX2 A;  4BKW A;  3CQZ K;  4KN7 A;  3FKI C;  4BY7 K;  2Y0S D;  1JVI A;  2YU9 A;  3PO3 K;  1TWC K;  5IYB C;  4YFX A;  5CJ9 A;  2JA7 A;  4P5A A;  3TFJ A;  3RZO K;  4OIQ A;  4Q5S A;  1SMY A;  1XPP A;  3V4G A;  2R92 A;  3PIP S;  1F7U A;  3HOX C;  3HOU C;  3BUE A;  4GTA A;  3HKZ D;  4XSX A;  1I3Q K;  4LOW A;  3ORE A;  5CHP A;  3MML B;  2P5M A;  1INN A;  4WFN S;  4WJ4 A;  3RZD K;  2D6F C;  1PJ7 A;  1I50 A; 
#chains in the Genus database with same CATH homology
 4AYB D;  4XLP A;  4BXX C;  5C44 K;  1Y1W K;  3GTG C;  1R9T K;  2E2H K;  4LJZ A;  5D4D A;  5IYD K;  5C44 C;  4QJV B;  5M5Y K;  5C4J K;  1Y1W C;  1HQM A;  1R9T C;  4JK1 A;  4LK1 A;  2E2H C;  3S17 K;  5IYD C;  4BBS K;  5C4J C;  2A6E A;  4A3K K;  4X6A K;  5FLM K;  2E2J K;  5IP7 K;  3K7A K;  5M5X K;  5IYC K;  2R7Z K;  3S17 C;  4BBS C;  2E2I K;  4A3C K;  4A3K C;  2VUM K;  4X6A C;  5FLM C;  1YNN A;  5IP7 C;  3K7A C;  2E2J C;  5IYC C;  4YG2 A;  2R7Z C;  4C3I K;  2E2I C;  4A3C C;  3M3Y K;  2VUM C;  4A3D K;  4C3I C;  2O5I A;  2CW0 A;  3M3Y C;  1TWA K;  3H3V L;  3S1N K;  4A3D C;  4OIR A;  5M5W K;  1BDF A;  1TWA C;  3S1N C;  1TWG K;  4MEX A;  3S1Q K;  3PO2 K;  2PMZ L;  1TWG C;  3S15 K;  4OIO A;  3S1Q C;  3GTM K;  2NVT K;  4LK0 A;  3PO2 C;  1I50 K;  3S15 C;  4C2M K;  2JA5 K;  1I6V A;  4A93 K;  3GTM C;  2NVT C;  3HOV K;  1I50 C;  4C3H K;  2PA8 L;  4QIW D;  2YU9 K;  4A3B K;  1ZYR A;  4C2M C;  2JA5 C;  2A69 A;  3H0G K;  4A93 C;  4Q4Z A;  3HOV C;  2JA7 K;  4C3H C;  2YU9 C;  3H3V D;  4A3B C;  3H0G C;  5C4X K;  4MEY A;  1SFO K;  2JA7 C;  3I4N K;  3DXJ A;  5C4X C;  3S2D K;  2R92 K;  2PMZ D;  1SFO C;  4KMU A;  3HKZ L;  4G7Z A;  3I4N C;  3GTL K;  4YFK A;  2A6H A;  4XLN A;  3S2D C;  2R92 C;  3GTL C;  4G7O A;  3GTK K;  3GTO K;  4OIN A;  4A3M K;  3WOD A;  2PA8 D;  1Y1V K;  3HOW K;  3GTK C;  3GTO C;  2NVY K;  4XSZ A;  3S16 K;  4A3M C;  1I6H K;  4KN4 A;  5C3E K;  3HOY K;  1Y1V C;  3HOW C;  2JA8 K;  4A3L K;  1IW7 A;  2Y0S L;  3M4O K;  2NVY C;  3S16 C;  3S1R K;  4BY1 K;  5C3E C;  3HOY C;  4A3L C;  2JA8 C;  1TWF K;  2A68 A;  3M4O C;  4BBR K;  4A3E K;  3HOZ K;  3S1R C;  4BY1 C;  4A3F K;  4C3J K;  3S14 K;  1TWF C;  4BBR C;  4A3E C;  3HOZ C;  5M3F K;  4A3F C;  5TMC A;  2B63 K;  4C3J C;  4G7H A;  1TWH K;  3S1M K;  3S14 C;  2WB1 L;  5M3M K;  2R93 K;  2B63 C;  1TWH C;  1YNJ A;  2BE5 A;  3S1M C;  4GZY A;  3FKI K;  4Y7N K;  3CQZ K;  3EQL A;  5IYB K;  4KN7 A;  2R93 C;  3FKI C;  4BY7 K;  2Y0S D;  4Y7N C;  5TMF A;  1K83 K;  3I4M K;  1TWC K;  3PO3 K;  3CQZ C;  5IYB C;  4YFX A;  4A3I K;  3GTP K;  4Y52 K;  3GTQ K;  4NOI A;  3I4M C;  1K83 C;  3PO3 C;  4BY7 C;  1WCM K;  1TWC C;  2WAQ L;  4Y52 C;  4YFN A;  3GTP C;  4A3I C;  4AYB L;  2NVQ K;  3RZO K;  4OIQ A;  2NVX K;  3GTQ C;  1SMY A;  1WCM C;  4Q5S A;  1I6H C;  1XPP A;  4A3J K;  3HOX K;  2JA6 K;  3HOU K;  4OIP A;  2NVQ C;  5IP9 K;  3GTJ K;  3RZO C;  2NVX C;  5FJ8 K;  4A3J C;  2JA6 C;  2WB1 D;  3HOX C;  3HOU C;  4A3G K;  4MQ9 A;  2O5J A;  5IP9 C;  3HKZ D;  4XSX A;  3GTJ C;  1I3Q K;  4QIW L;  3S2H K;  4A3G C;  1I3Q C;  3RZD K;  4QJV A;  4ZH4 A;  3S2H C;  2PPB A;  4BXX K;  3GTG K;  3RZD C;  2WAQ D;  4LLG A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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2PPBA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations