3GTQ | Genus

Total Genus 45

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	45
sequence length	266
structure length	266
Chain Sequence	EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription, transferase/dna-rna hybrid
publication title	Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	45
structure length	266
sequence length	266
ec nomenclature
pdb deposition date	2009-03-27

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
C	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
C	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	3gtqC02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	3gtqC01

3S1QC 3S14C 4YFKA 3I4NC 4C3IC 1Y1VK 4JK1A 4OIRA 2YU9C 4OIOA 2B63C 3S15K 4A3EK 3GTOC 4QJVB 5M3FK 4A3DK 2JA6C 4KMUA 2WB1D 4A3KC 5C4JK 4QIWD 3RZDK 2PA8L 3HOXK 5IYCK 2JA8K 2JA5K 2O5JA 4C3JK 4Y52K 3HOYC 3HOZK 5C4XC 3K7AC 5C3EC 5IYBK 1Y1WK 2JA7K 4NOIA 4BBSK 2PMZD 5IP9K 4LJZA 2NVXC 5M5WK 4OIQA 2O5IA 2VUMK 2A68A 3CQZC 4LK0A 3HOVK 3S2HK 1SMYA 2BE5A 4BY7K 4C3HC 4A3CK 1TWCK 2YU9K 3HOUK 3GTJK 1R9TC 2NVYC 4BXXK 2R92K 5FJ8K 5FLMK 1WCMC 3S17C 4A3GK 4A3LC 4Q5SA 3GTPC 4A93K 2PA8D 1K83C 3M4OC 3FKIK 1I3QC 2E2HC 1TWFK 4BY1K 3S1MK 3RZOK 4ZH4A 3I4MK 3GTQC 3PO2C 3GTKC 1I6HK 2NVTK 3S16C 2E2IK 3GTGK 4A3MK 4MEYA 5C44C 3HOWC 5IYDK 3PO3C 1I6VA 1TWHC 4A3FC 3M3YK 4AYBL 4C2MK 3S1NK 5IP7C 4X6AK 4OIPA 2NVQC 2WAQL 4Y7NK 3S2DK 3S14K 3S1QK 3I4NK 1YNNA 4C3IK 3H0GC 4A3JC 1TWGC 3GTMC 2R93C 3S1RC 3S2DC 1TWAC 4BBRC 4LLGA 1SFOC 1HQMA 4A3IC 2E2JC 2R7ZC 4A3BC 4BXXC 2B63K 1I50C 3GTLC 3I4MC 2JA6K 3GTOK 4A3KK 5M3MK 4A3BK 4OINA 1Y1VC 5M5YK 3EQLA 4YG2A 3S15C 4LK1A 1IW7A 2A6EA 4A3EC 4MEXA 4A3DC 3HOYK 5C4XK 3K7AK 4MQ9A 5C3EK 3WODA 5C4JC 2PPBA 2CW0A 3H3VL 3DXJA 3RZDC 2NVXK 5TMCA 3HOXC 4AYBD 5TMFA 5IYCC 2JA8C 3HKZL 2JA5C 4YFXA 3CQZK 4C3JC 4Y52C 2WAQD 4XLNA 4XLPA 2Y0SL 4KN7A 3HOZC 4C3HK 5IYBC 4KN4A 1YNJA 1Y1WC 2JA7C 4BBSC 5IP9C 1R9TK 4GZYA 2NVYK 1XPPA 4QJVA 2VUMC 3HOVC 3S2HC 1WCMK 1ZYRA 3S17K 4XSXA 4A3LK 4Q4ZA 4BY7C 4A3CC 1TWCC 3GTPK 3HOUC 3GTJC 1K83K 3M4OK 5D4DA 1I3QK 2E2HK 2R92C 5FLMC 3GTQK 3PO2K 3GTKK 4YFNA 4A3GC 3S16K 3H3VD 4A93C 2WB1L 5C44K 1BDFA 4QIWL 5M5XK 3HKZD 3HOWK 3PO3K 3FKIC 1TWHK 4A3FK 4BY1C 1TWFC 3S1MC 3RZOC 4G7HA 2Y0SD 1I6HC 5IP7K 2NVQK 2NVTC 2E2IC 3GTGC 4A3MC 5IYDC 3H0GK 4A3JK 1TWGK 2PMZL 3M3YC 3GTMK 2R93K 3S1RK 2A6HA 4G7OA 1TWAK 4BBRK 1SFOK 4C2MC 2A69A 3S1NC 4G7ZA 4X6AC 4A3IK 2E2JK 4Y7NC 1I50K 3GTLK 2R7ZK 4XSZA
chains in the Genus database with same CATH superfamily

4G0UA 5HQHA 1Y1VK 2YU9C 3QX3A 4QJVB 3TFHA 3DLLS 5M3FK 5HL7S 4QIWD 3HOXK 4O2DA 5IYCK 1IS1A 4C3JK 1J6WA 4WFNS 3HOZK 4PAAA 5C4XC 5C3EC 2ZJRS 1Y1WK 2JA7K 4NOIA 4GT9A 5DM7S 4LJZA 2NVXC 3AD7C 5IORA 3HOVK 3S2HK 4DDQA 2BE5A 1WOPA 3GTGA 3CF5S 4RMFA 3T01A 5FJ8K 1WCMC 4A3GK 4Q5SA 1VH2A 2CFAA 1I3QC 1F7VA 4BY1K 1TWFK 3S1MK 3GTQC 1J6XA 2JA6A 3S16C 2E2IK 4A3MK 3HOWC 3PO3C 3GSIA 3JSTA 3GDZA 4X6AK 2NVQC 2WAQL 4GTLA 1JVIA 1PJ5A 4Y7NK 4FM9A 2YU9K 2L5NA 2E2JC 1HQMA 4A3IC 3S0XA 1PJ7A 2R7ZA 3GTLA 5IOSA 4LK1A 1IW7A 4BLAA 1VLOA 1Y1VA 5C4XK 4MQ9A 5C3EK 3GEHA 2CW0A 3H3VL 2NVXK 1K83A 1DCHA 4WJ3M 2E2HA 2JA5C 4Y52C 4XLNA 4KN7A 3HXAA 1YNJA 4QJVA 1RU0A 4KATA 1WCMK 1Y1WA 4XSXA 5CHPA 4Q4ZA 4BKWA 4GTCA 4A3CC 1TWCC 1XXAA 3H0GA 5D4DA 1I3QK 2R92C 1FEUA 3GTQK 4YFNA 2V6UA 3PIOS 3S16K 4A93C 5M5XK 2V6SA 3HOWK 4QIWL 3PO3K 3HKZD 4LR2A 3FKIC 1WOSA 1DCPA 2NVQK 2NVTC 2KPUA 1TWFA 3FOEA 3BUEA 3M3YC 2E2JK 2FQTA 4A3IK 4G7ZA 1WQGA 3AD8C 3S1QC 3S14C 3I4NC 2VUMA 2GSUA 1ISEA 5EGEA 3GTOC 3OEPA 4A3KC 3BP8C 2JA5K 1F7UA 4P9SA 4Y52K 3HOYC 4GTFA 3N3YA 4P5AA 1ZQ1C 3N0BA 5L46A 1AB4A 2A68A 3CQZC 1UV7A 2GSNA 4A3CK 1TWCK 1R9TC 2ZJQS 2R92K 4XCHA 3S17C 3ADAC 4A3LC 1JQWA 4C45A 3GTPC 4A93K 5E68A 3L4KA 1WORA 3TFJA 3FKIK 4ZH4A 1IE0A 3GTKC 2NVTK 1I3QA 3L4JA 4IOCS 1O2AA 3GTQA 1I6VA 3M3YK 4A3FC 3LYWA 5JFEA 1WIHA 4OIPA 4GFQA 3S1QK 3S14K 3I4NK 1TWGC 3S2DC 1EH1A 4KM8A 4LLGA 4AH6A 3GTOK 2GSOA 3I4MC 4A3KK 5M3MK 5TJ3A 1V5VA 4YG2A 1XZPA 1DCOA 1JOEA 3S15C 4A3DC 3HOYK 5C4JC 2L3UA 3DXJA 3RZDC 3HKZL 4AYBD 3CQZK 3IPJA 1IBAA 4BBSC 1R9TK 1WOOA 1O2FB 1ZYRA 3S17K 4A3LK 1WSVA 3GTPK 1ZVUA 3HOUC 3GTMA 1SFOA 2GAGC 1O2BA 3GTKK 1I50A 2V6TA 4KAWX 1X31C 4G0WA 1G51A 4A3FK 3A8KA 2P5MA 2FQOA 3RZOC 1BGWA 3GTGC 5JVGS 4LOWA 5IYDC 1TWGK 4G7OA 3S2DK 4C2MC 3S1NC 4WFAS 3I4MK 4XSZA 2JH3A 2JA7A 4C3IC 3NUHA 2GAHC 3Q3QA 4OIRA 1F93A 4OIOA 2B63C 4WF9S 3S15K 5JVOA 2JA6C 4A3DK 3LAPA 5C4JK 3RZDK 3GTOA 5CJ9A 1USOA 1XXBA 1ZXOA 4BBSK 2D6FC 1XZPB 4G0VA 3V4GA 5M5WK 3BP3A 4KMAA 3VA7A 1SMYA 2E2IA 3HOUK 2NVYC 4KASA 1C0AA 4KMDA 1WQFA 2PA8D 1VJEA 1K83C 3M4OC 4GTEA 2E2HC 2YU9A 3RZOK 3PO2C 3GTGK 5C44C 4KDDA 5IYDK 3GTKA 1TWHC 4AYBL 4C2MK 3S1NK 2ZFZA 3AD9C 1J98A 4GTAA 4WJ4A 2NVXA 4C3IK 3H0GC 4A3JC 2R93C 3FHZA 3S1RC 4BXXC 1TWAC 4BBRC 4KMHA 2B63K 2P8TA 2JA6K 3TFIA 1YCLA 2XCQA 1O28A 5M5YK 3EQLA 2ZUFA 1WCMA 2A6EA 4WCES 4A3EC 5DM6S 4MEXA 2RH6A 3GEIA 3WODA 5TMCA 2JA8C 2RGRA 4YFXA 4XLPA 5IYBC 4KN4A 1XZQA 5IP9C 4GZYA 1J6VA 1XPPA 2NVYK 4KB2A 2VUMC 3SZYA 5IOTA 4BY7C 4BLBA 3GTJC 1K83K 3M4OK 2KXYA 3A8JA 2E2HK 1BS2A 5FLMC 1B4BA 3PO2K 1ZBSA 5C44K 1BDFA 4LQYA 2KQ1A 1TWHK 4GTDA 1IL2A 4G7HA 2Y0SD 1I6HC 3H0GK 4A3JK 2R93K 3G4CA 3S1RK 3T02A 1TWAK 4BBRK 4BXXK 2JA5A 2A69A 1XXCA 2Y3PA 4YFKA 4ILDA 2XCRB 3G4AA 4JK1A 1EK8A 4A3EK 4FZBA 2ZJPS 4KMUA 2WB1D 1TWCA 2B63A 2PA8L 4PABA 2JA8K 2R92A 2O5JA 4U67S 1USMA 3K7AC 3MMLB 5IYBK 2PMZD 5IP9K 3FKIA 1INNA 4OIQA 2O5IA 2VUMK 4LK0A 4BY7K 4C3HC 3LPXA 3GTJK 1EQRA 3AQPA 3OPFA 5FLMK 4GTBA 1L0WA 1O29A 2NVYA 3OREA 1XZQB 3FOFA 4WILA 1O27A 3T00A 1I6HK 3A8IA 2XCOA 4IO9S 4MEYA 3CAGA 5IP7C 1TWHA 1GE9A 1O26A 1YNNA 5JVHS 3GTMC 1BJTA 4P5BA 4IOAS 1PJ6A 1YX2A 3CQZA 4WFBS 1SFOC 4A3BC 2R7ZC 1WSRA 2R93A 1I50C 3GTLC 3TTGA 5HL8A 4M1XA 1TWAA 1R9TA 2KWAA 4OINA 1Y1VC 2ZUEA 3GEEA 2PHCB 1VGXA 3K7AK 2PPBA 3GTPA 3LAJA 3HOXC 5IYCC 5TMFA 1WQHA 3AQOA 4C3JC 2CFAB 2WAQD 2Y0SL 3HOZC 4C3HK 1O24A 1EFWA 1Y1WC 3ERED 2JA7C 1B4AA 3HOVC 3S2HC 3AH5A 1EI6A 1VRQC 1HI9A 1KQ4A 3SZZA 4KB4A 5EGHA 1TWGA 1F9NA 4KC6A 1O25A 3GTJA 4A3GC 4KM9A 1IQ0A 1DD5A 3H3VD 3GIRA 2WB1L 4J3NA 4BY1C 1TWFC 3S1MC 4KARA 5IP7K 2EBBA 3PIPS 2E2IC 4A3MC 5IOQA 2W7VA 3GTMK 2PMZL 2A6HA 1SFOK 4A3BK 2R7ZK 4X6AC 3N0CA 4Y7NC 1I50K 3GTLK
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3S1Q C;  3S14 C;  4YFK A;  3I4N C;  4C3I C;  1Y1V K;  4JK1 A;  4OIR A;  2YU9 C;  4OIO A;  2B63 C;  3S15 K;  4A3E K;  3GTO C;  4QJV B;  5M3F K;  4A3D K;  2JA6 C;  4KMU A;  2WB1 D;  4A3K C;  5C4J K;  4QIW D;  3RZD K;  2PA8 L;  3HOX K;  5IYC K;  2JA8 K;  2JA5 K;  2O5J A;  4C3J K;  4Y52 K;  3HOY C;  3HOZ K;  5C4X C;  3K7A C;  5C3E C;  5IYB K;  1Y1W K;  2JA7 K;  4NOI A;  4BBS K;  2PMZ D;  5IP9 K;  4LJZ A;  2NVX C;  5M5W K;  4OIQ A;  2O5I A;  2VUM K;  2A68 A;  3CQZ C;  4LK0 A;  3HOV K;  3S2H K;  1SMY A;  2BE5 A;  4BY7 K;  4C3H C;  4A3C K;  1TWC K;  2YU9 K;  3HOU K;  3GTJ K;  1R9T C;  2NVY C;  4BXX K;  2R92 K;  5FJ8 K;  5FLM K;  1WCM C;  3S17 C;  4A3G K;  4A3L C;  4Q5S A;  3GTP C;  4A93 K;  2PA8 D;  1K83 C;  3M4O C;  3FKI K;  1I3Q C;  2E2H C;  1TWF K;  4BY1 K;  3S1M K;  3RZO K;  4ZH4 A;  3I4M K;  3GTQ C;  3PO2 C;  3GTK C;  1I6H K;  2NVT K;  3S16 C;  2E2I K;  3GTG K;  4A3M K;  4MEY A;  5C44 C;  3HOW C;  5IYD K;  3PO3 C;  1I6V A;  1TWH C;  4A3F C;  3M3Y K;  4AYB L;  4C2M K;  3S1N K;  5IP7 C;  4X6A K;  4OIP A;  2NVQ C;  2WAQ L;  4Y7N K;  3S2D K;  3S14 K;  3S1Q K;  3I4N K;  1YNN A;  4C3I K;  3H0G C;  4A3J C;  1TWG C;  3GTM C;  2R93 C;  3S1R C;  3S2D C;  1TWA C;  4BBR C;  4LLG A;  1SFO C;  1HQM A;  4A3I C;  2E2J C;  2R7Z C;  4A3B C;  4BXX C;  2B63 K;  1I50 C;  3GTL C;  3I4M C;  2JA6 K;  3GTO K;  4A3K K;  5M3M K;  4A3B K;  4OIN A;  1Y1V C;  5M5Y K;  3EQL A;  4YG2 A;  3S15 C;  4LK1 A;  1IW7 A;  2A6E A;  4A3E C;  4MEX A;  4A3D C;  3HOY K;  5C4X K;  3K7A K;  4MQ9 A;  5C3E K;  3WOD A;  5C4J C;  2PPB A;  2CW0 A;  3H3V L;  3DXJ A;  3RZD C;  2NVX K;  5TMC A;  3HOX C;  4AYB D;  5TMF A;  5IYC C;  2JA8 C;  3HKZ L;  2JA5 C;  4YFX A;  3CQZ K;  4C3J C;  4Y52 C;  2WAQ D;  4XLN A;  4XLP A;  2Y0S L;  4KN7 A;  3HOZ C;  4C3H K;  5IYB C;  4KN4 A;  1YNJ A;  1Y1W C;  2JA7 C;  4BBS C;  5IP9 C;  1R9T K;  4GZY A;  2NVY K;  1XPP A;  4QJV A;  2VUM C;  3HOV C;  3S2H C;  1WCM K;  1ZYR A;  3S17 K;  4XSX A;  4A3L K;  4Q4Z A;  4BY7 C;  4A3C C;  1TWC C;  3GTP K;  3HOU C;  3GTJ C;  1K83 K;  3M4O K;  5D4D A;  1I3Q K;  2E2H K;  2R92 C;  5FLM C;  3GTQ K;  3PO2 K;  3GTK K;  4YFN A;  4A3G C;  3S16 K;  3H3V D;  4A93 C;  2WB1 L;  5C44 K;  1BDF A;  4QIW L;  5M5X K;  3HKZ D;  3HOW K;  3PO3 K;  3FKI C;  1TWH K;  4A3F K;  4BY1 C;  1TWF C;  3S1M C;  3RZO C;  4G7H A;  2Y0S D;  1I6H C;  5IP7 K;  2NVQ K;  2NVT C;  2E2I C;  3GTG C;  4A3M C;  5IYD C;  3H0G K;  4A3J K;  1TWG K;  2PMZ L;  3M3Y C;  3GTM K;  2R93 K;  3S1R K;  2A6H A;  4G7O A;  1TWA K;  4BBR K;  1SFO K;  4C2M C;  2A69 A;  3S1N C;  4G7Z A;  4X6A C;  4A3I K;  2E2J K;  4Y7N C;  1I50 K;  3GTL K;  2R7Z K;  4XSZ A; 
#chains in the Genus database with same CATH topology
 4G0U A;  5HQH A;  1Y1V K;  2YU9 C;  3QX3 A;  4QJV B;  3TFH A;  3DLL S;  5M3F K;  5HL7 S;  4QIW D;  3HOX K;  4O2D A;  5IYC K;  1IS1 A;  4C3J K;  1J6W A;  4WFN S;  3HOZ K;  4PAA A;  5C4X C;  5C3E C;  2ZJR S;  1Y1W K;  2JA7 K;  4NOI A;  4GT9 A;  5DM7 S;  4LJZ A;  2NVX C;  3AD7 C;  5IOR A;  3HOV K;  3S2H K;  4DDQ A;  2BE5 A;  1WOP A;  3GTG A;  3CF5 S;  4RMF A;  3T01 A;  5FJ8 K;  1WCM C;  4A3G K;  4Q5S A;  1VH2 A;  2CFA A;  1I3Q C;  1F7V A;  4BY1 K;  1TWF K;  3S1M K;  3GTQ C;  1J6X A;  2JA6 A;  3S16 C;  2E2I K;  4A3M K;  3HOW C;  3PO3 C;  3GSI A;  3JST A;  3GDZ A;  4X6A K;  2NVQ C;  2WAQ L;  4GTL A;  1JVI A;  1PJ5 A;  4Y7N K;  4FM9 A;  2YU9 K;  2L5N A;  2E2J C;  1HQM A;  4A3I C;  3S0X A;  1PJ7 A;  2R7Z A;  3GTL A;  5IOS A;  4LK1 A;  1IW7 A;  4BLA A;  1VLO A;  1Y1V A;  5C4X K;  4MQ9 A;  5C3E K;  3GEH A;  2CW0 A;  3H3V L;  2NVX K;  1K83 A;  1DCH A;  4WJ3 M;  2E2H A;  2JA5 C;  4Y52 C;  4XLN A;  4KN7 A;  3HXA A;  1YNJ A;  4QJV A;  1RU0 A;  4KAT A;  1WCM K;  1Y1W A;  4XSX A;  5CHP A;  4Q4Z A;  4BKW A;  4GTC A;  4A3C C;  1TWC C;  1XXA A;  3H0G A;  5D4D A;  1I3Q K;  2R92 C;  1FEU A;  3GTQ K;  4YFN A;  2V6U A;  3PIO S;  3S16 K;  4A93 C;  5M5X K;  2V6S A;  3HOW K;  4QIW L;  3PO3 K;  3HKZ D;  4LR2 A;  3FKI C;  1WOS A;  1DCP A;  2NVQ K;  2NVT C;  2KPU A;  1TWF A;  3FOE A;  3BUE A;  3M3Y C;  2E2J K;  2FQT A;  4A3I K;  4G7Z A;  1WQG A;  3AD8 C;  3S1Q C;  3S14 C;  3I4N C;  2VUM A;  2GSU A;  1ISE A;  5EGE A;  3GTO C;  3OEP A;  4A3K C;  3BP8 C;  2JA5 K;  1F7U A;  4P9S A;  4Y52 K;  3HOY C;  4GTF A;  3N3Y A;  4P5A A;  1ZQ1 C;  3N0B A;  5L46 A;  1AB4 A;  2A68 A;  3CQZ C;  1UV7 A;  2GSN A;  4A3C K;  1TWC K;  1R9T C;  2ZJQ S;  2R92 K;  4XCH A;  3S17 C;  3ADA C;  4A3L C;  1JQW A;  4C45 A;  3GTP C;  4A93 K;  5E68 A;  3L4K A;  1WOR A;  3TFJ A;  3FKI K;  4ZH4 A;  1IE0 A;  3GTK C;  2NVT K;  1I3Q A;  3L4J A;  4IOC S;  1O2A A;  3GTQ A;  1I6V A;  3M3Y K;  4A3F C;  3LYW A;  5JFE A;  1WIH A;  4OIP A;  4GFQ A;  3S1Q K;  3S14 K;  3I4N K;  1TWG C;  3S2D C;  1EH1 A;  4KM8 A;  4LLG A;  4AH6 A;  3GTO K;  2GSO A;  3I4M C;  4A3K K;  5M3M K;  5TJ3 A;  1V5V A;  4YG2 A;  1XZP A;  1DCO A;  1JOE A;  3S15 C;  4A3D C;  3HOY K;  5C4J C;  2L3U A;  3DXJ A;  3RZD C;  3HKZ L;  4AYB D;  3CQZ K;  3IPJ A;  1IBA A;  4BBS C;  1R9T K;  1WOO A;  1O2F B;  1ZYR A;  3S17 K;  4A3L K;  1WSV A;  3GTP K;  1ZVU A;  3HOU C;  3GTM A;  1SFO A;  2GAG C;  1O2B A;  3GTK K;  1I50 A;  2V6T A;  4KAW X;  1X31 C;  4G0W A;  1G51 A;  4A3F K;  3A8K A;  2P5M A;  2FQO A;  3RZO C;  1BGW A;  3GTG C;  5JVG S;  4LOW A;  5IYD C;  1TWG K;  4G7O A;  3S2D K;  4C2M C;  3S1N C;  4WFA S;  3I4M K;  4XSZ A;  2JH3 A;  2JA7 A;  4C3I C;  3NUH A;  2GAH C;  3Q3Q A;  4OIR A;  1F93 A;  4OIO A;  2B63 C;  4WF9 S;  3S15 K;  5JVO A;  2JA6 C;  4A3D K;  3LAP A;  5C4J K;  3RZD K;  3GTO A;  5CJ9 A;  1USO A;  1XXB A;  1ZXO A;  4BBS K;  2D6F C;  1XZP B;  4G0V A;  3V4G A;  5M5W K;  3BP3 A;  4KMA A;  3VA7 A;  1SMY A;  2E2I A;  3HOU K;  2NVY C;  4KAS A;  1C0A A;  4KMD A;  1WQF A;  2PA8 D;  1VJE A;  1K83 C;  3M4O C;  4GTE A;  2E2H C;  2YU9 A;  3RZO K;  3PO2 C;  3GTG K;  5C44 C;  4KDD A;  5IYD K;  3GTK A;  1TWH C;  4AYB L;  4C2M K;  3S1N K;  2ZFZ A;  3AD9 C;  1J98 A;  4GTA A;  4WJ4 A;  2NVX A;  4C3I K;  3H0G C;  4A3J C;  2R93 C;  3FHZ A;  3S1R C;  4BXX C;  1TWA C;  4BBR C;  4KMH A;  2B63 K;  2P8T A;  2JA6 K;  3TFI A;  1YCL A;  2XCQ A;  1O28 A;  5M5Y K;  3EQL A;  2ZUF A;  1WCM A;  2A6E A;  4WCE S;  4A3E C;  5DM6 S;  4MEX A;  2RH6 A;  3GEI A;  3WOD A;  5TMC A;  2JA8 C;  2RGR A;  4YFX A;  4XLP A;  5IYB C;  4KN4 A;  1XZQ A;  5IP9 C;  4GZY A;  1J6V A;  1XPP A;  2NVY K;  4KB2 A;  2VUM C;  3SZY A;  5IOT A;  4BY7 C;  4BLB A;  3GTJ C;  1K83 K;  3M4O K;  2KXY A;  3A8J A;  2E2H K;  1BS2 A;  5FLM C;  1B4B A;  3PO2 K;  1ZBS A;  5C44 K;  1BDF A;  4LQY A;  2KQ1 A;  1TWH K;  4GTD A;  1IL2 A;  4G7H A;  2Y0S D;  1I6H C;  3H0G K;  4A3J K;  2R93 K;  3G4C A;  3S1R K;  3T02 A;  1TWA K;  4BBR K;  4BXX K;  2JA5 A;  2A69 A;  1XXC A;  2Y3P A;  4YFK A;  4ILD A;  2XCR B;  3G4A A;  4JK1 A;  1EK8 A;  4A3E K;  4FZB A;  2ZJP S;  4KMU A;  2WB1 D;  1TWC A;  2B63 A;  2PA8 L;  4PAB A;  2JA8 K;  2R92 A;  2O5J A;  4U67 S;  1USM A;  3K7A C;  3MML B;  5IYB K;  2PMZ D;  5IP9 K;  3FKI A;  1INN A;  4OIQ A;  2O5I A;  2VUM K;  4LK0 A;  4BY7 K;  4C3H C;  3LPX A;  3GTJ K;  1EQR A;  3AQP A;  3OPF A;  5FLM K;  4GTB A;  1L0W A;  1O29 A;  2NVY A;  3ORE A;  1XZQ B;  3FOF A;  4WIL A;  1O27 A;  3T00 A;  1I6H K;  3A8I A;  2XCO A;  4IO9 S;  4MEY A;  3CAG A;  5IP7 C;  1TWH A;  1GE9 A;  1O26 A;  1YNN A;  5JVH S;  3GTM C;  1BJT A;  4P5B A;  4IOA S;  1PJ6 A;  1YX2 A;  3CQZ A;  4WFB S;  1SFO C;  4A3B C;  2R7Z C;  1WSR A;  2R93 A;  1I50 C;  3GTL C;  3TTG A;  5HL8 A;  4M1X A;  1TWA A;  1R9T A;  2KWA A;  4OIN A;  1Y1V C;  2ZUE A;  3GEE A;  2PHC B;  1VGX A;  3K7A K;  2PPB A;  3GTP A;  3LAJ A;  3HOX C;  5IYC C;  5TMF A;  1WQH A;  3AQO A;  4C3J C;  2CFA B;  2WAQ D;  2Y0S L;  3HOZ C;  4C3H K;  1O24 A;  1EFW A;  1Y1W C;  3ERE D;  2JA7 C;  1B4A A;  3HOV C;  3S2H C;  3AH5 A;  1EI6 A;  1VRQ C;  1HI9 A;  1KQ4 A;  3SZZ A;  4KB4 A;  5EGH A;  1TWG A;  1F9N A;  4KC6 A;  1O25 A;  3GTJ A;  4A3G C;  4KM9 A;  1IQ0 A;  1DD5 A;  3H3V D;  3GIR A;  2WB1 L;  4J3N A;  4BY1 C;  1TWF C;  3S1M C;  4KAR A;  5IP7 K;  2EBB A;  3PIP S;  2E2I C;  4A3M C;  5IOQ A;  2W7V A;  3GTM K;  2PMZ L;  2A6H A;  1SFO K;  4A3B K;  2R7Z K;  4X6A C;  3N0C A;  4Y7N C;  1I50 K;  3GTL K; 
#chains in the Genus database with same CATH homology
 3S1Q C;  3S14 C;  4YFK A;  3I4N C;  4C3I C;  1Y1V K;  4JK1 A;  4OIR A;  2YU9 C;  4OIO A;  2B63 C;  3S15 K;  4A3E K;  3GTO C;  4QJV B;  5M3F K;  4A3D K;  2JA6 C;  4KMU A;  2WB1 D;  4A3K C;  5C4J K;  4QIW D;  3RZD K;  2PA8 L;  3HOX K;  5IYC K;  2JA8 K;  2JA5 K;  2O5J A;  4C3J K;  4Y52 K;  3HOY C;  3HOZ K;  5C4X C;  3K7A C;  5C3E C;  5IYB K;  1Y1W K;  2JA7 K;  4NOI A;  4BBS K;  2PMZ D;  5IP9 K;  4LJZ A;  2NVX C;  5M5W K;  4OIQ A;  2O5I A;  2VUM K;  2A68 A;  3CQZ C;  4LK0 A;  3HOV K;  3S2H K;  1SMY A;  2BE5 A;  4BY7 K;  4C3H C;  4A3C K;  1TWC K;  2YU9 K;  3HOU K;  3GTJ K;  1R9T C;  2NVY C;  4BXX K;  2R92 K;  5FJ8 K;  5FLM K;  1WCM C;  3S17 C;  4A3G K;  4A3L C;  4Q5S A;  3GTP C;  4A93 K;  2PA8 D;  1K83 C;  3M4O C;  3FKI K;  1I3Q C;  2E2H C;  1TWF K;  4BY1 K;  3S1M K;  3RZO K;  4ZH4 A;  3I4M K;  3GTQ C;  3PO2 C;  3GTK C;  1I6H K;  2NVT K;  3S16 C;  2E2I K;  3GTG K;  4A3M K;  4MEY A;  5C44 C;  3HOW C;  5IYD K;  3PO3 C;  1I6V A;  1TWH C;  4A3F C;  3M3Y K;  4AYB L;  4C2M K;  3S1N K;  5IP7 C;  4X6A K;  4OIP A;  2NVQ C;  2WAQ L;  4Y7N K;  3S2D K;  3S14 K;  3S1Q K;  3I4N K;  1YNN A;  4C3I K;  3H0G C;  4A3J C;  1TWG C;  3GTM C;  2R93 C;  3S1R C;  3S2D C;  1TWA C;  4BBR C;  4LLG A;  1SFO C;  1HQM A;  4A3I C;  2E2J C;  2R7Z C;  4A3B C;  4BXX C;  2B63 K;  1I50 C;  3GTL C;  3I4M C;  2JA6 K;  3GTO K;  4A3K K;  5M3M K;  4A3B K;  4OIN A;  1Y1V C;  5M5Y K;  3EQL A;  4YG2 A;  3S15 C;  4LK1 A;  1IW7 A;  2A6E A;  4A3E C;  4MEX A;  4A3D C;  3HOY K;  5C4X K;  3K7A K;  4MQ9 A;  5C3E K;  3WOD A;  5C4J C;  2PPB A;  2CW0 A;  3H3V L;  3DXJ A;  3RZD C;  2NVX K;  5TMC A;  3HOX C;  4AYB D;  5TMF A;  5IYC C;  2JA8 C;  3HKZ L;  2JA5 C;  4YFX A;  3CQZ K;  4C3J C;  4Y52 C;  2WAQ D;  4XLN A;  4XLP A;  2Y0S L;  4KN7 A;  3HOZ C;  4C3H K;  5IYB C;  4KN4 A;  1YNJ A;  1Y1W C;  2JA7 C;  4BBS C;  5IP9 C;  1R9T K;  4GZY A;  2NVY K;  1XPP A;  4QJV A;  2VUM C;  3HOV C;  3S2H C;  1WCM K;  1ZYR A;  3S17 K;  4XSX A;  4A3L K;  4Q4Z A;  4BY7 C;  4A3C C;  1TWC C;  3GTP K;  3HOU C;  3GTJ C;  1K83 K;  3M4O K;  5D4D A;  1I3Q K;  2E2H K;  2R92 C;  5FLM C;  3GTQ K;  3PO2 K;  3GTK K;  4YFN A;  4A3G C;  3S16 K;  3H3V D;  4A93 C;  2WB1 L;  5C44 K;  1BDF A;  4QIW L;  5M5X K;  3HKZ D;  3HOW K;  3PO3 K;  3FKI C;  1TWH K;  4A3F K;  4BY1 C;  1TWF C;  3S1M C;  3RZO C;  4G7H A;  2Y0S D;  1I6H C;  5IP7 K;  2NVQ K;  2NVT C;  2E2I C;  3GTG C;  4A3M C;  5IYD C;  3H0G K;  4A3J K;  1TWG K;  2PMZ L;  3M3Y C;  3GTM K;  2R93 K;  3S1R K;  2A6H A;  4G7O A;  1TWA K;  4BBR K;  1SFO K;  4C2M C;  2A69 A;  3S1N C;  4G7Z A;  4X6A C;  4A3I K;  2E2J K;  4Y7N C;  1I50 K;  3GTL K;  2R7Z K;  4XSZ A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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3GTQC

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations