3HOV | Genus

Total Genus 52

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	52
sequence length	266
structure length	266
Chain Sequence	EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transcription, transferase/dna/rna
publication title	Structural basis of transcription: mismatch-specific fidelity mechanisms and paused RNA polymerase II with frayed RNA. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase II subunit RPB1
total genus	52
structure length	266
sequence length	266
ec nomenclature
pdb deposition date	2009-06-03

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
C	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
C	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	3hovC02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	3hovC01

1I6VA 2E2JC 1TWHK 4OINA 4BBRK 4KN4A 2O5IA 1Y1WC 3PO3C 4KMUA 1K83C 5C44C 4BXXC 5C4JK 4A3BC 4Y7NC 1HQMA 3WODA 5FLMC 1TWCK 2JA5K 4A3CK 3S1QC 5IP9K 5M3FK 3HOWC 2E2HC 4A3EC 4QJVA 3RZDK 2BE5A 4Q4ZA 4BY1C 2NVQC 3M4OK 2JA6K 3GTMK 2PA8D 3GTJC 4AYBD 3S15C 2VUMK 4A3LK 4XSZA 1TWGK 1TWHC 3DXJA 4BBRC 2PMZD 2JA7K 3GTGC 1SMYA 1TWAC 4KN7A 4LK1A 2O5JA 1I3QK 3M3YK 4OIPA 4AYBL 3GTPK 2NVTK 2JA5C 1TWCC 1IW7A 4A3CC 1R9TK 5IP9C 4GZYA 1I50K 4A93K 4JK1A 4OIRA 4C2MK 3RZDC 3GTGK 4A3DK 1TWAK 2JA6C 2CW0A 3GTMC 4G7OA 5M5XK 4A3LC 3HOYK 2VUMC 4BBSK 4XLPA 1TWGC 3CQZK 1XPPA 4A3KC 4MEXA 5FJ8K 2JA7C 2A6HA 4Q5SA 5M5YK 2B63K 4C3HK 4OIQA 1I3QC 2Y0SD 3M3YC 4A3MK 3GTPC 2NVTC 3HOVK 4C3JC 5C4XK 3S1RK 1R9TC 4YFNA 2R7ZK 2E2IK 3H0GK 3HOZK 3HKZD 1I50C 4A3KK 4A93C 3GTKK 4C2MC 3S1MK 3S17K 4A3DC 4MEYA 3I4MK 5IYCK 4X6AK 2PA8L 3HOYC 4BBSC 3CQZC 2JA8K 3GTOK 4G7HA 1WCMK 4C3JK 4QIWD 2PMZL 2B63C 4C3HC 3S14K 4A3MC 4XSXA 3PO2K 2R92K 3HOVC 4OIOA 2WB1D 3S1RC 3H3VD 5C4XC 3FKIK 4QIWL 2R7ZC 2E2IC 3H0GC 3HOZC 2NVYK 1I6HK 5TMFA 3GTKC 4XLNA 4BY7K 4YFXA 2R93C 3S1MC 4LLGA 3S17C 4G7ZA 4A3FK 3GTQK 1BDFA 3S2HK 2WAQD 3I4MC 5IYCC 4X6AC 3K7AK 4Y52K 5IYDK 2YU9K 1Y1VK 2JA8C 3GTOC 3I4NK 1WCMC 4LK0A 1TWFK 3EQLA 4C3IK 5C3EK 5IYBK 3RZOK 4A3GK 1SFOK 3S15K 1YNNA 3S14C 3S16C 2Y0SL 3HOUK 4YFKA 3PO2C 2R92C 3S2DK 5M3MK 3FKIC 1I6HC 2A6EA 2NVYC 3HKZL 1YNJA 3S1NK 4BY7C 3GTQC 3M4OC 2NVXK 4A3FC 3GTLK 3S2HC 2A68A 3HOXK 3S16K 3K7AC 5TMCA 2PPBA 4Y52C 5IYDC 4A3IK 4A3JK 2R93K 2YU9C 2E2JK 1Y1VC 3I4NC 4YG2A 4C3IC 1TWFC 5IP7C 5IYBC 5C3EC 4A3GC 3RZOC 4QJVB 1Y1WK 3PO3K 1SFOC 1K83K 4NOIA 5C44K 4BXXK 3HOUC 4Y7NK 2A69A 4A3BK 4LJZA 5FLMK 3S2DC 3S1QK 4MQ9A 4ZH4A 2WB1L 3H3VL 3HOWK 2E2HK 1ZYRA 3S1NC 5IP7K 4A3EK 5M5WK 5C4JC 2NVXC 3GTLC 4BY1K 2NVQK 3HOXC 2WAQL 3GTJK 4A3JC 4A3IC 5D4DA
chains in the Genus database with same CATH superfamily

1O27A 2E2JC 1F9NA 2O5IA 3GIRA 3QX3A 4U67S 3IPJA 5HL7S 1HQMA 3WODA 2JA5K 2P5MA 1O24A 5IP9K 4G0WA 4A3EC 1VH2A 4Q4ZA 1TWFA 4BY1C 3A8IA 2NVQC 3GTMK 3GTJC 4AYBD 3S15C 3GTKA 1TWGK 4P9SA 2PMZD 1TWAC 4LK1A 4KN7A 3GTOA 1WCMA 3GTPK 3GTLA 1TWCC 1O2FB 1IW7A 4A3CC 2D6FC 1X31C 1F7VA 2R93A 4C2MK 2JH3A 4WFAS 4A3LC 3HOYK 2VUMC 4XLPA 3CQZK 1B4BA 3GTQA 5IOTA 1XPPA 3AD7C 4GTEA 2A6HA 4KC6A 2L5NA 4C3HK 1XXBA 1Y1VA 1C0AA 3N0BA 2NVTC 1SFOA 3S1RK 5IOQA 2E2IK 1O28A 3V4GA 3HKZD 3TFHA 3S17K 4A3DC 1WOPA 3BP3A 4X6AK 1WQFA 2JA8K 3Q3QA 1XZQB 4C3JK 2GSUA 4A3MC 4IOAS 4OIOA 2WB1D 3H3VD 5C4XC 2ZJRS 1BS2A 3FKIK 4QIWL 1I6HK 3GTKC 4YFXA 3AD9C 5IYCC 4IOCS 2E2HA 4M1XA 2FQTA 3GTOC 1WCMC 1ZQ1C 1IBAA 1TWHA 3CAGA 5M3MK 3S1NK 2GSOA 3GTQC 2NVXK 3S2HC 5E68A 3AD8C 3S16K 5TMCA 2E2JK 1Y1VC 3I4NC 5IYBC 1SFOC 4KAWX 4KMAA 1INNA 2JA7A 3S2DC 5CHPA 4MQ9A 4ZH4A 4AH6A 5IP7K 4A3EK 5M5WK 1IS1A 3BP8C 4IO9S 4P5BA 1R9TA 3HOXC 1AB4A 1O29A 4J3NA 3GTJK 2NVQK 4A3IC 3S15K 5D4DA 3SZZA 3FOFA 1XZQA 4KMUA 2GAGC 5C44C 4P5AA 4FZBA 5FLMC 1TWCK 2GAHC 4A3CK 2B63A 1WORA 1EK8A 3GDZA 5JFEA 5M3FK 3HOWC 2E2HC 2YU9A 3N0CA 1EFWA 2R7ZA 2PA8D 4A3LK 3G4CA 2VUMK 4XSZA 1TWHC 2KXYA 1G51A 3AQPA 1SMYA 4AYBL 3JSTA 2NVTK 1WQGA 4BLAA 3GTGK 1WOOA 2EBBA 4A3DK 1F7UA 2CW0A 1USOA 1YCLA 4WCES 4A3KC 1JVIA 5FJ8K 2JA7C 4PABA 1O25A 3M3YC 3CF5S 4A3MK 2L3UA 1O2AA 2PHCB 4C45A 5C4XK 1R9TC 4A93C 2V6TA 3GTKK 4KARA 5EGEA 5IYCK 5JVGS 5IORA 1VGXA 3GTOK 4G7HA 1WCMK 1JOEA 4FM9A 2JA5A 2B63C 1WOSA 2FQOA 3HXAA 5HQHA 1FEUA 3T02A 1K83A 2R7ZC 3HOZC 3H0GC 2V6UA 4KB4A 4O2DA 3T01A 3GTQK 3S1MC 1USMA 3S2HK 1BDFA 2WAQD 3I4MC 3TTGA 1Y1VK 3I4NK 5IYBK 2XCQA 1SFOK 2Y0SL 2RH6A 4YFKA 3S2DK 4GTFA 1IQ0A 3CQZA 2KQ1A 4WFBS 2A68A 3HOXK 5IOSA 1ZXOA 4A3IK 4Y52C 5IYDC 3OEPA 1B4AA 4ILDA 1BJTA 2P8TA 3LPXA 1PJ5A 4C3IC 1TWFC 2ZJQS 3RZOC 2JA6A 3GEIA 4KASA 4NOIA 5C44K 1ISEA 3HOUC 3A8JA 4KATA 5FLMK 1I3QA 3HOWK 2W7VA 2E2HK 2Y3PA 1HI9A 3GTLC 1J6WA 2R93C 4A3JC 1I50A 1I6VA 1TWHK 1XXAA 2XCRB 4GTAA 1K83C 3FKIA 4RMFA 2V6SA 5C4JK 4A3BC 4Y7NC 3G4AA 4LQYA 5EGHA 1XXCA 4QJVA 2BE5A 1UV7A 3DXJA 4BBRC 4BKWA 2JA7K 2O5JA 3M3YK 4OIPA 1R9TK 4GZYA 1EI6A 4A93K 4JK1A 3RZDC 2R92A 1TWAK 2JA6C 4G7OA 2NVYA 4KB2A 4GTCA 4MEXA 4G0UA 4Q5SA 2B63K 1I3QC 2CFAA 1IE0A 5HL8A 4C3JC 1PJ6A 4YFNA 4PAAA 3HOZK 3H0GK 3OREA 2R7ZK 1I50C 3S1MK 1PJ7A 3ERED 3I4MK 4WILA 3L4KA 1L0WA 4BBSC 2PMZL 4XSXA 1DCOA 3BUEA 4KM9A 3AH5A 1Y1WA 3HOVC 3AQOA 3FHZA 1WSVA 2ZJPS 2VUMA 5TMFA 4XLNA 5DM7S 4LLGA 4G7ZA 3PIOS 4Y52K 5IYDK 5L46A 4LK0A 4C3IK 1TWFK 3EQLA 3NUHA 3RZOK 3S14C 3S16C 3HOUK 3PO2C 2R92C 3GTGA 2A6EA 2NVYC 3HKZL 4BY7C 5TJ3A 3M4OC 3GTLK 4A3FC 4KMDA 3K7AC 4A3JK 5JVHS 1XZPA 2R93K 2YU9C 5CJ9A 5IP7C 1IL2A 4A3GC 5C3EC 3L4JA 4QJVB 3GTMA 1K83K 4KMHA 5JVOA 1TWGA 4A3BK 4Y7NK 4GT9A 2WB1L 3H3VL 1ZYRA 1O26A 3GTPA 4XCHA 2ZUFA 1EQRA 4G0VA 4OINA 4BBRK 4KN4A 1Y1WC 3PO3C 1DCHA 4BXXC 3VA7A 3S1QC 4BLBA 1EH1A 3RZDK 2CFAB 3DLLS 3MMLB 2JA6K 1BGWA 2E2IA 3S0XA 3FOEA 3GTGC 2KPUA 1I3QK 4WJ4A 1ZBSA 3GEEA 2JA5C 4WJ3M 5IP9C 4GTDA 1I50K 4OIRA 2KWAA 3GEHA 1WSRA 1O2BA 3GTMC 1DCPA 3N3YA 5M5XK 4BBSK 1J98A 4GTLA 1TWGC 4DDQA 1DD5A 3LAPA 5M5YK 4OIQA 1F93A 2Y0SD 2GSNA 4LR2A 3GTPC 1KQ4A 3GSIA 4LOWA 3HOVK 2ZUEA 3LAJA 4A3KK 1WQHA 4C2MC 3T00A 1GE9A 4MEYA 1YX2A 1RU0A 2PA8L 3HOYC 4WFNS 3CQZC 2NVXA 4QIWD 4C3HC 3S14K 1XZPB 3PIPS 4GTBA 4KM8A 2R92K 3PO2K 3S1RC 2RGRA 3LYWA 2E2IC 2NVYK 4BY7K 4WF9S 1J6VA 3S17C 4A3FK 3M4OK 1VJEA 2ZFZA 4X6AC 3K7AK 2YU9K 2JA8C 3A8KA 4A3GK 5C3EK 3TFJA 5DM6S 3ADAC 3GTJA 3SZYA 1YNNA 3TFIA 3OPFA 4BY1K 4GFQA 1TWAA 3FKIC 1I6HC 1J6XA 1YNJA 1JQWA 1V5VA 1VLOA 1TWCA 1WIHA 2PPBA 4YG2A 2XCOA 1Y1WK 3PO3K 3H0GA 4BXXK 2A69A 1ZVUA 4LJZA 3S1QK 4KDDA 3S1NC 5C4JC 2NVXC 1VRQC 2WAQL
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 1I6V A;  2E2J C;  1TWH K;  4OIN A;  4BBR K;  4KN4 A;  2O5I A;  1Y1W C;  3PO3 C;  4KMU A;  1K83 C;  5C44 C;  4BXX C;  5C4J K;  4A3B C;  4Y7N C;  1HQM A;  3WOD A;  5FLM C;  1TWC K;  2JA5 K;  4A3C K;  3S1Q C;  5IP9 K;  5M3F K;  3HOW C;  2E2H C;  4A3E C;  4QJV A;  3RZD K;  2BE5 A;  4Q4Z A;  4BY1 C;  2NVQ C;  3M4O K;  2JA6 K;  3GTM K;  2PA8 D;  3GTJ C;  4AYB D;  3S15 C;  2VUM K;  4A3L K;  4XSZ A;  1TWG K;  1TWH C;  3DXJ A;  4BBR C;  2PMZ D;  2JA7 K;  3GTG C;  1SMY A;  1TWA C;  4KN7 A;  4LK1 A;  2O5J A;  1I3Q K;  3M3Y K;  4OIP A;  4AYB L;  3GTP K;  2NVT K;  2JA5 C;  1TWC C;  1IW7 A;  4A3C C;  1R9T K;  5IP9 C;  4GZY A;  1I50 K;  4A93 K;  4JK1 A;  4OIR A;  4C2M K;  3RZD C;  3GTG K;  4A3D K;  1TWA K;  2JA6 C;  2CW0 A;  3GTM C;  4G7O A;  5M5X K;  4A3L C;  3HOY K;  2VUM C;  4BBS K;  4XLP A;  1TWG C;  3CQZ K;  1XPP A;  4A3K C;  4MEX A;  5FJ8 K;  2JA7 C;  2A6H A;  4Q5S A;  5M5Y K;  2B63 K;  4C3H K;  4OIQ A;  1I3Q C;  2Y0S D;  3M3Y C;  4A3M K;  3GTP C;  2NVT C;  3HOV K;  4C3J C;  5C4X K;  3S1R K;  1R9T C;  4YFN A;  2R7Z K;  2E2I K;  3H0G K;  3HOZ K;  3HKZ D;  1I50 C;  4A3K K;  4A93 C;  3GTK K;  4C2M C;  3S1M K;  3S17 K;  4A3D C;  4MEY A;  3I4M K;  5IYC K;  4X6A K;  2PA8 L;  3HOY C;  4BBS C;  3CQZ C;  2JA8 K;  3GTO K;  4G7H A;  1WCM K;  4C3J K;  4QIW D;  2PMZ L;  2B63 C;  4C3H C;  3S14 K;  4A3M C;  4XSX A;  3PO2 K;  2R92 K;  3HOV C;  4OIO A;  2WB1 D;  3S1R C;  3H3V D;  5C4X C;  3FKI K;  4QIW L;  2R7Z C;  2E2I C;  3H0G C;  3HOZ C;  2NVY K;  1I6H K;  5TMF A;  3GTK C;  4XLN A;  4BY7 K;  4YFX A;  2R93 C;  3S1M C;  4LLG A;  3S17 C;  4G7Z A;  4A3F K;  3GTQ K;  1BDF A;  3S2H K;  2WAQ D;  3I4M C;  5IYC C;  4X6A C;  3K7A K;  4Y52 K;  5IYD K;  2YU9 K;  1Y1V K;  2JA8 C;  3GTO C;  3I4N K;  1WCM C;  4LK0 A;  1TWF K;  3EQL A;  4C3I K;  5C3E K;  5IYB K;  3RZO K;  4A3G K;  1SFO K;  3S15 K;  1YNN A;  3S14 C;  3S16 C;  2Y0S L;  3HOU K;  4YFK A;  3PO2 C;  2R92 C;  3S2D K;  5M3M K;  3FKI C;  1I6H C;  2A6E A;  2NVY C;  3HKZ L;  1YNJ A;  3S1N K;  4BY7 C;  3GTQ C;  3M4O C;  2NVX K;  4A3F C;  3GTL K;  3S2H C;  2A68 A;  3HOX K;  3S16 K;  3K7A C;  5TMC A;  2PPB A;  4Y52 C;  5IYD C;  4A3I K;  4A3J K;  2R93 K;  2YU9 C;  2E2J K;  1Y1V C;  3I4N C;  4YG2 A;  4C3I C;  1TWF C;  5IP7 C;  5IYB C;  5C3E C;  4A3G C;  3RZO C;  4QJV B;  1Y1W K;  3PO3 K;  1SFO C;  1K83 K;  4NOI A;  5C44 K;  4BXX K;  3HOU C;  4Y7N K;  2A69 A;  4A3B K;  4LJZ A;  5FLM K;  3S2D C;  3S1Q K;  4MQ9 A;  4ZH4 A;  2WB1 L;  3H3V L;  3HOW K;  2E2H K;  1ZYR A;  3S1N C;  5IP7 K;  4A3E K;  5M5W K;  5C4J C;  2NVX C;  3GTL C;  4BY1 K;  2NVQ K;  3HOX C;  2WAQ L;  3GTJ K;  4A3J C;  4A3I C;  5D4D A; 
#chains in the Genus database with same CATH topology
 1O27 A;  2E2J C;  1F9N A;  2O5I A;  3GIR A;  3QX3 A;  4U67 S;  3IPJ A;  5HL7 S;  1HQM A;  3WOD A;  2JA5 K;  2P5M A;  1O24 A;  5IP9 K;  4G0W A;  4A3E C;  1VH2 A;  4Q4Z A;  1TWF A;  4BY1 C;  3A8I A;  2NVQ C;  3GTM K;  3GTJ C;  4AYB D;  3S15 C;  3GTK A;  1TWG K;  4P9S A;  2PMZ D;  1TWA C;  4LK1 A;  4KN7 A;  3GTO A;  1WCM A;  3GTP K;  3GTL A;  1TWC C;  1O2F B;  1IW7 A;  4A3C C;  2D6F C;  1X31 C;  1F7V A;  2R93 A;  4C2M K;  2JH3 A;  4WFA S;  4A3L C;  3HOY K;  2VUM C;  4XLP A;  3CQZ K;  1B4B A;  3GTQ A;  5IOT A;  1XPP A;  3AD7 C;  4GTE A;  2A6H A;  4KC6 A;  2L5N A;  4C3H K;  1XXB A;  1Y1V A;  1C0A A;  3N0B A;  2NVT C;  1SFO A;  3S1R K;  5IOQ A;  2E2I K;  1O28 A;  3V4G A;  3HKZ D;  3TFH A;  3S17 K;  4A3D C;  1WOP A;  3BP3 A;  4X6A K;  1WQF A;  2JA8 K;  3Q3Q A;  1XZQ B;  4C3J K;  2GSU A;  4A3M C;  4IOA S;  4OIO A;  2WB1 D;  3H3V D;  5C4X C;  2ZJR S;  1BS2 A;  3FKI K;  4QIW L;  1I6H K;  3GTK C;  4YFX A;  3AD9 C;  5IYC C;  4IOC S;  2E2H A;  4M1X A;  2FQT A;  3GTO C;  1WCM C;  1ZQ1 C;  1IBA A;  1TWH A;  3CAG A;  5M3M K;  3S1N K;  2GSO A;  3GTQ C;  2NVX K;  3S2H C;  5E68 A;  3AD8 C;  3S16 K;  5TMC A;  2E2J K;  1Y1V C;  3I4N C;  5IYB C;  1SFO C;  4KAW X;  4KMA A;  1INN A;  2JA7 A;  3S2D C;  5CHP A;  4MQ9 A;  4ZH4 A;  4AH6 A;  5IP7 K;  4A3E K;  5M5W K;  1IS1 A;  3BP8 C;  4IO9 S;  4P5B A;  1R9T A;  3HOX C;  1AB4 A;  1O29 A;  4J3N A;  3GTJ K;  2NVQ K;  4A3I C;  3S15 K;  5D4D A;  3SZZ A;  3FOF A;  1XZQ A;  4KMU A;  2GAG C;  5C44 C;  4P5A A;  4FZB A;  5FLM C;  1TWC K;  2GAH C;  4A3C K;  2B63 A;  1WOR A;  1EK8 A;  3GDZ A;  5JFE A;  5M3F K;  3HOW C;  2E2H C;  2YU9 A;  3N0C A;  1EFW A;  2R7Z A;  2PA8 D;  4A3L K;  3G4C A;  2VUM K;  4XSZ A;  1TWH C;  2KXY A;  1G51 A;  3AQP A;  1SMY A;  4AYB L;  3JST A;  2NVT K;  1WQG A;  4BLA A;  3GTG K;  1WOO A;  2EBB A;  4A3D K;  1F7U A;  2CW0 A;  1USO A;  1YCL A;  4WCE S;  4A3K C;  1JVI A;  5FJ8 K;  2JA7 C;  4PAB A;  1O25 A;  3M3Y C;  3CF5 S;  4A3M K;  2L3U A;  1O2A A;  2PHC B;  4C45 A;  5C4X K;  1R9T C;  4A93 C;  2V6T A;  3GTK K;  4KAR A;  5EGE A;  5IYC K;  5JVG S;  5IOR A;  1VGX A;  3GTO K;  4G7H A;  1WCM K;  1JOE A;  4FM9 A;  2JA5 A;  2B63 C;  1WOS A;  2FQO A;  3HXA A;  5HQH A;  1FEU A;  3T02 A;  1K83 A;  2R7Z C;  3HOZ C;  3H0G C;  2V6U A;  4KB4 A;  4O2D A;  3T01 A;  3GTQ K;  3S1M C;  1USM A;  3S2H K;  1BDF A;  2WAQ D;  3I4M C;  3TTG A;  1Y1V K;  3I4N K;  5IYB K;  2XCQ A;  1SFO K;  2Y0S L;  2RH6 A;  4YFK A;  3S2D K;  4GTF A;  1IQ0 A;  3CQZ A;  2KQ1 A;  4WFB S;  2A68 A;  3HOX K;  5IOS A;  1ZXO A;  4A3I K;  4Y52 C;  5IYD C;  3OEP A;  1B4A A;  4ILD A;  1BJT A;  2P8T A;  3LPX A;  1PJ5 A;  4C3I C;  1TWF C;  2ZJQ S;  3RZO C;  2JA6 A;  3GEI A;  4KAS A;  4NOI A;  5C44 K;  1ISE A;  3HOU C;  3A8J A;  4KAT A;  5FLM K;  1I3Q A;  3HOW K;  2W7V A;  2E2H K;  2Y3P A;  1HI9 A;  3GTL C;  1J6W A;  2R93 C;  4A3J C;  1I50 A;  1I6V A;  1TWH K;  1XXA A;  2XCR B;  4GTA A;  1K83 C;  3FKI A;  4RMF A;  2V6S A;  5C4J K;  4A3B C;  4Y7N C;  3G4A A;  4LQY A;  5EGH A;  1XXC A;  4QJV A;  2BE5 A;  1UV7 A;  3DXJ A;  4BBR C;  4BKW A;  2JA7 K;  2O5J A;  3M3Y K;  4OIP A;  1R9T K;  4GZY A;  1EI6 A;  4A93 K;  4JK1 A;  3RZD C;  2R92 A;  1TWA K;  2JA6 C;  4G7O A;  2NVY A;  4KB2 A;  4GTC A;  4MEX A;  4G0U A;  4Q5S A;  2B63 K;  1I3Q C;  2CFA A;  1IE0 A;  5HL8 A;  4C3J C;  1PJ6 A;  4YFN A;  4PAA A;  3HOZ K;  3H0G K;  3ORE A;  2R7Z K;  1I50 C;  3S1M K;  1PJ7 A;  3ERE D;  3I4M K;  4WIL A;  3L4K A;  1L0W A;  4BBS C;  2PMZ L;  4XSX A;  1DCO A;  3BUE A;  4KM9 A;  3AH5 A;  1Y1W A;  3HOV C;  3AQO A;  3FHZ A;  1WSV A;  2ZJP S;  2VUM A;  5TMF A;  4XLN A;  5DM7 S;  4LLG A;  4G7Z A;  3PIO S;  4Y52 K;  5IYD K;  5L46 A;  4LK0 A;  4C3I K;  1TWF K;  3EQL A;  3NUH A;  3RZO K;  3S14 C;  3S16 C;  3HOU K;  3PO2 C;  2R92 C;  3GTG A;  2A6E A;  2NVY C;  3HKZ L;  4BY7 C;  5TJ3 A;  3M4O C;  3GTL K;  4A3F C;  4KMD A;  3K7A C;  4A3J K;  5JVH S;  1XZP A;  2R93 K;  2YU9 C;  5CJ9 A;  5IP7 C;  1IL2 A;  4A3G C;  5C3E C;  3L4J A;  4QJV B;  3GTM A;  1K83 K;  4KMH A;  5JVO A;  1TWG A;  4A3B K;  4Y7N K;  4GT9 A;  2WB1 L;  3H3V L;  1ZYR A;  1O26 A;  3GTP A;  4XCH A;  2ZUF A;  1EQR A;  4G0V A;  4OIN A;  4BBR K;  4KN4 A;  1Y1W C;  3PO3 C;  1DCH A;  4BXX C;  3VA7 A;  3S1Q C;  4BLB A;  1EH1 A;  3RZD K;  2CFA B;  3DLL S;  3MML B;  2JA6 K;  1BGW A;  2E2I A;  3S0X A;  3FOE A;  3GTG C;  2KPU A;  1I3Q K;  4WJ4 A;  1ZBS A;  3GEE A;  2JA5 C;  4WJ3 M;  5IP9 C;  4GTD A;  1I50 K;  4OIR A;  2KWA A;  3GEH A;  1WSR A;  1O2B A;  3GTM C;  1DCP A;  3N3Y A;  5M5X K;  4BBS K;  1J98 A;  4GTL A;  1TWG C;  4DDQ A;  1DD5 A;  3LAP A;  5M5Y K;  4OIQ A;  1F93 A;  2Y0S D;  2GSN A;  4LR2 A;  3GTP C;  1KQ4 A;  3GSI A;  4LOW A;  3HOV K;  2ZUE A;  3LAJ A;  4A3K K;  1WQH A;  4C2M C;  3T00 A;  1GE9 A;  4MEY A;  1YX2 A;  1RU0 A;  2PA8 L;  3HOY C;  4WFN S;  3CQZ C;  2NVX A;  4QIW D;  4C3H C;  3S14 K;  1XZP B;  3PIP S;  4GTB A;  4KM8 A;  2R92 K;  3PO2 K;  3S1R C;  2RGR A;  3LYW A;  2E2I C;  2NVY K;  4BY7 K;  4WF9 S;  1J6V A;  3S17 C;  4A3F K;  3M4O K;  1VJE A;  2ZFZ A;  4X6A C;  3K7A K;  2YU9 K;  2JA8 C;  3A8K A;  4A3G K;  5C3E K;  3TFJ A;  5DM6 S;  3ADA C;  3GTJ A;  3SZY A;  1YNN A;  3TFI A;  3OPF A;  4BY1 K;  4GFQ A;  1TWA A;  3FKI C;  1I6H C;  1J6X A;  1YNJ A;  1JQW A;  1V5V A;  1VLO A;  1TWC A;  1WIH A;  2PPB A;  4YG2 A;  2XCO A;  1Y1W K;  3PO3 K;  3H0G A;  4BXX K;  2A69 A;  1ZVU A;  4LJZ A;  3S1Q K;  4KDD A;  3S1N C;  5C4J C;  2NVX C;  1VRQ C;  2WAQ L; 
#chains in the Genus database with same CATH homology
 1I6V A;  2E2J C;  1TWH K;  4OIN A;  4BBR K;  4KN4 A;  2O5I A;  1Y1W C;  3PO3 C;  4KMU A;  1K83 C;  5C44 C;  4BXX C;  5C4J K;  4A3B C;  4Y7N C;  1HQM A;  3WOD A;  5FLM C;  1TWC K;  2JA5 K;  4A3C K;  3S1Q C;  5IP9 K;  5M3F K;  3HOW C;  2E2H C;  4A3E C;  4QJV A;  3RZD K;  2BE5 A;  4Q4Z A;  4BY1 C;  2NVQ C;  3M4O K;  2JA6 K;  3GTM K;  2PA8 D;  3GTJ C;  4AYB D;  3S15 C;  2VUM K;  4A3L K;  4XSZ A;  1TWG K;  1TWH C;  3DXJ A;  4BBR C;  2PMZ D;  2JA7 K;  3GTG C;  1SMY A;  1TWA C;  4KN7 A;  4LK1 A;  2O5J A;  1I3Q K;  3M3Y K;  4OIP A;  4AYB L;  3GTP K;  2NVT K;  2JA5 C;  1TWC C;  1IW7 A;  4A3C C;  1R9T K;  5IP9 C;  4GZY A;  1I50 K;  4A93 K;  4JK1 A;  4OIR A;  4C2M K;  3RZD C;  3GTG K;  4A3D K;  1TWA K;  2JA6 C;  2CW0 A;  3GTM C;  4G7O A;  5M5X K;  4A3L C;  3HOY K;  2VUM C;  4BBS K;  4XLP A;  1TWG C;  3CQZ K;  1XPP A;  4A3K C;  4MEX A;  5FJ8 K;  2JA7 C;  2A6H A;  4Q5S A;  5M5Y K;  2B63 K;  4C3H K;  4OIQ A;  1I3Q C;  2Y0S D;  3M3Y C;  4A3M K;  3GTP C;  2NVT C;  3HOV K;  4C3J C;  5C4X K;  3S1R K;  1R9T C;  4YFN A;  2R7Z K;  2E2I K;  3H0G K;  3HOZ K;  3HKZ D;  1I50 C;  4A3K K;  4A93 C;  3GTK K;  4C2M C;  3S1M K;  3S17 K;  4A3D C;  4MEY A;  3I4M K;  5IYC K;  4X6A K;  2PA8 L;  3HOY C;  4BBS C;  3CQZ C;  2JA8 K;  3GTO K;  4G7H A;  1WCM K;  4C3J K;  4QIW D;  2PMZ L;  2B63 C;  4C3H C;  3S14 K;  4A3M C;  4XSX A;  3PO2 K;  2R92 K;  3HOV C;  4OIO A;  2WB1 D;  3S1R C;  3H3V D;  5C4X C;  3FKI K;  4QIW L;  2R7Z C;  2E2I C;  3H0G C;  3HOZ C;  2NVY K;  1I6H K;  5TMF A;  3GTK C;  4XLN A;  4BY7 K;  4YFX A;  2R93 C;  3S1M C;  4LLG A;  3S17 C;  4G7Z A;  4A3F K;  3GTQ K;  1BDF A;  3S2H K;  2WAQ D;  3I4M C;  5IYC C;  4X6A C;  3K7A K;  4Y52 K;  5IYD K;  2YU9 K;  1Y1V K;  2JA8 C;  3GTO C;  3I4N K;  1WCM C;  4LK0 A;  1TWF K;  3EQL A;  4C3I K;  5C3E K;  5IYB K;  3RZO K;  4A3G K;  1SFO K;  3S15 K;  1YNN A;  3S14 C;  3S16 C;  2Y0S L;  3HOU K;  4YFK A;  3PO2 C;  2R92 C;  3S2D K;  5M3M K;  3FKI C;  1I6H C;  2A6E A;  2NVY C;  3HKZ L;  1YNJ A;  3S1N K;  4BY7 C;  3GTQ C;  3M4O C;  2NVX K;  4A3F C;  3GTL K;  3S2H C;  2A68 A;  3HOX K;  3S16 K;  3K7A C;  5TMC A;  2PPB A;  4Y52 C;  5IYD C;  4A3I K;  4A3J K;  2R93 K;  2YU9 C;  2E2J K;  1Y1V C;  3I4N C;  4YG2 A;  4C3I C;  1TWF C;  5IP7 C;  5IYB C;  5C3E C;  4A3G C;  3RZO C;  4QJV B;  1Y1W K;  3PO3 K;  1SFO C;  1K83 K;  4NOI A;  5C44 K;  4BXX K;  3HOU C;  4Y7N K;  2A69 A;  4A3B K;  4LJZ A;  5FLM K;  3S2D C;  3S1Q K;  4MQ9 A;  4ZH4 A;  2WB1 L;  3H3V L;  3HOW K;  2E2H K;  1ZYR A;  3S1N C;  5IP7 K;  4A3E K;  5M5W K;  5C4J C;  2NVX C;  3GTL C;  4BY1 K;  2NVQ K;  3HOX C;  2WAQ L;  3GTJ K;  4A3J C;  4A3I C;  5D4D A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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3HOVC

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations