3S14C

Rna polymerase ii initiation complex with a 6-nt rna
Total Genus 64

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (7-13)TI10 (204-207)TI1 (14-17)S12 (228-233)S2 (17-23)EMPTYTIV1 (22-25)AH1 (27-40)TIV6 (163-166)AH4 (240-265)S10 (152-162)3H3 (168-170)S3 (43-54)TI6 (148-151)S9 (143-147)AH2 (60-69)S8 (131-132)TI2 (76-79)TIV2 (74-77)TI4 (92-95)3H1 (83-85)TIV3 (88-91)TI'1 (124-127)3H2 (115-117)S5 (96-104)TIV5 (107-110)S6 (111-114)TI5 (136-139)S11 (176-180)TI9 (184-187)TI8 (181-184)AH3 (197-200)TVIII3 (187-190)TI12 (220-223)TVIII4 (236-239)TI7 (164-167)O1 (127-129)S4 (72-73)TI3 (77-80)S7 (119-120)3H4 (207-209)TIV7 (193-196)Updating...
connected with : NaN
molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 64
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s14C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s14C01
3GTPC 2A69A 3GTPK 3K7AC 5M5WK 4QJVA 4A3JC 3K7AK 4A3FC 2PA8D 4A3FK 4G7OA 4XLPA 2NVTC 1WCMC 4Y7NK 1SMYA 3FKIC 4Y52C 1WCMK 4A3MK 2NVTK 3FKIK 2E2HC 4Y52K 2NVXC 5IP7C 3PO2C 1YNJA 2NVXK 5IP7K 4C3IC 3PO2K 1I50C 4C3IK 1TWGC 1TWFC 4XLNA 3WODA 4G7HA 1TWFK 1TWGK 2NVYC 4Q4ZA 2WAQD 5IYCC 3GTMC 3S17C 3M4OC 4LK1A 2NVYK 5IYCK 5M5YK 3GTMK 3S17K 4BY1K 3M4OK 4BY7K 2R92C 3CQZC 3HKZL 4GZYA 2E2IC 2R7ZC 4BXXC 2PMZL 3CQZK 2E2IK 4OINA 4ZH4A 1Y1WK 2R92K 1TWHC 3HOZC 2R7ZK 4BXXK 1TWHK 3HOZK 3S2HK 4X6AC 5FJ8K 3EQLA 5IYDC 2A6HA 4X6AK 5IYDK 4OIRA 4KN7A 1K83C 4KMUA 5C3EC 1K83K 5C3EK 2WB1L 2JA7C 2JA7K 4MEYA 5C4XK 4QJVB 4NOIA 5IYBC 4LK0A 2JA6K 1Y1VC 4C3HC 4Y7NC 4A3MC 5IYBK 1TWCC 1Y1VK 4C3HK 1YNNA 5IP9C 1TWCK 1I3QC 3HKZD 3H3VD 5IP9K 5M5XK 1I3QK 2PPBA 4AYBL 4A3KC 4A3KK 3RZOK 4QIWL 4OIQA 4BY1C 4BY7C 2JA5K 3M3YK 1Y1WC 2YU9C 3HOYC 4JK1A 1XPPA 2YU9K 3HOYK 3S2HC 1HQMA 2O5JA 1IW7A 1BDFA 3HOWC 3H0GC 2Y0SL 3HOWK 3H0GK 3GTLC 4YFXA 5TMCA 5C44K 5C4XC 3GTLK 4A3BC 4YFKA 2JA6C 4A3DC 5M3FK 4A3BK 2JA8K 4A3DK 4YFNA 3S14C 2NVQC 2E2JC 3S15C 5FLMC 2PMZD 2BE5A 2E2JK 2NVQK 5FLMK 3S14K 3S15K 2PA8L 1SFOC 3PO3C 1SFOK 3PO3K 4OIOA 1I6VA 2O5IA 4MEXA 2JA5C 3M3YC 3I4MK 2WB1D 1ZYRA 4A3IC 5M3MK 4A3IK 3I4NC 1R9TC 4YG2A 2R93C 2WAQL 1R9TK 3I4NK 4Q5SA 2VUMC 2R93K 3GTJC 3GTKK 2VUMK 4A93C 3GTJK 4A93K 3S1MC 4AYBD 2A6EA 4KN4A 4MQ9A 4C2MC 3S2DC 4C2MK 4A3JK 3S1MK 3S2DK 5C44C 4A3LC 4A3LK 4QIWD 3DXJA 2B63C 3RZDC 4LJZA 2JA8C 2E2HK 2B63K 3RZDK 3HOUC 4LLGA 3HOUK 5TMFA 3GTOC 3S1NC 1TWAC 4XSXA 1I50K 2CW0A 3GTOK 4C3JC 1TWAK 3S1NK 3S1QC 4C3JK 4OIPA 3S1QK 3HOVC 2A68A 3GTGC 3HOVK 4A3EC 4A3CC 3GTQC 3GTGK 4XSZA 4A3EK 3GTQK 3H3VL 4A3CK 4BBRC 4BBRK 2Y0SD 3I4MC 5D4DA 4A3GC 5C4JC 3S1RC 4BBSC 4A3GK 5C4JK 3S1RK 4BBSK 3S16C 1I6HC 3HOXC 3RZOC 3S16K 1I6HK 3HOXK 4G7ZA 3GTKC
chains in the Genus database with same CATH superfamily
3GTPC 1J6WA 5M5WK 1ZVUA 3AD9C 3GDZA 4Y7NK 3NUHA 2R92A 2E2IA 4Y52K 2E2HC 2NVXC 5IP7C 3PO2C 4C3IC 3OEPA 1TWFK 5E68A 2GSNA 2WAQD 5IYCC 2KXYA 1XXBA 2R92C 4GZYA 2E2IC 2JA6A 4BKWA 4ZH4A 1Y1VA 2KQ1A 5IOQA 4WJ4A 5IYDK 5C3EC 1EH1A 2V6TA 1PJ6A 1EQRA 2JA5A 1Y1VC 4LQYA 2YU9A 1O2BA 2V6UA 4AYBL 1WOSA 3PIOS 1VRQC 4BY1C 4BY7C 3M3YK 2XCQA 4KMHA 1F7UA 2YU9C 3HOYC 4JK1A 4WF9S 3S2HC 3GEEA 4P9SA 1WSRA 1TWAA 3HOWC 3GTGA 3G4AA 3LAJA 5C44K 3FOFA 1B4AA 4A3BK 1XXAA 4FZBA 1XZQA 1WSVA 4KATA 5JVGS 3GTJA 3PO3C 2GAGC 2O5IA 2XCOA 2B63A 1RU0A 3A8IA 4A3IK 4G0UA 3L4KA 4KDDA 1WOPA 1TWFA 2R93K 3GTJC 1PJ5A 2VUMK 4AYBD 3S1MK 4C2MK 3S2DK 3GTQA 3SZYA 5JFEA 4A3LK 2GSUA 2B63C 3RZDC 2E2HK 3HOUC 1DCPA 4C3JC 2D6FC 1XZQB 4BLBA 3S1QK 2A68A 3CAGA 3HOVK 4A3EC 1VH2A 3GTQC 2W7VA 1BJTA 4ILDA 1WORA 3DLLS 2P8TA 4GFQA 3MMLB 1WCMA 4KASA 1WQHA 4A3GK 5C4JK 4BBSK 4KMAA 3K7AC 3LYWA 4A3JC 4A3FC 2JH3A 1WCMC 1VGXA 3CQZA 2NVTK 4LR2A 1Y1WA 3FKIK 3ADAC 1YNJA 3AD7C 1X31C 3GIRA 4LOWA 1O25A 4XLNA 3WODA 4G7HA 1TWGK 1VLOA 4M1XA 3S17C 3GTMC 2NVYK 2JA7A 1WIHA 3M4OK 4BY1K 4BY7K 3CQZC 1L0WA 4BXXC 2R7ZK 4OINA 1TWHC 3HOZC 3S2HK 3N0CA 5HL8A 5IOSA 4X6AK 3BUEA 4KMUA 1K83K 3LPXA 2WB1L 2JA7C 4C3HC 4A3MC 4BLAA 5IYBK 5IP9C 1TWCK 1USOA 5M5XK 5CHPA 1I3QK 2PPBA 1WOOA 2VUMA 4A3KK 1EI6A 4OIQA 3H0GA 3AD8C 1IQ0A 3GEHA 5HQHA 2V6SA 1J98A 3H0GC 1INNA 1SFOA 4YFXA 3GTLK 3V4GA 4PABA 4YFKA 2JA6C 2GAHC 4A3DK 3S14C 2NVQC 1O29A 3S15C 5FLMC 1JVIA 2BE5A 1R9TA 2E2JK 2PA8L 3GTKA 1SFOC 2L5NA 4OIOA 1I6VA 3PIPS 1JOEA 2FQTA 2JA5C 1BS2A 2WB1D 3FKIA 1ZYRA 1O28A 5EGEA 3I4NC 1R9TC 4GTAA 1I50A 3GTOA 3A8KA 1IE0A 4A93C 5CJ9A 3G4CA 2A6EA 4A3JK 2RGRA 1EK8A 3JSTA 1ZXOA 3HXAA 5TMFA 3GTOC 1G51A 1TWAC 4XSXA 3N3YA 3TFHA 3S1NK 4U67S 2ZJQS 3LAPA 3GTGC 4A3CC 3H3VL 4BBRC 2ZJRS 3I4MC 4C45A 5D4DA 3AQPA 3S1RC 4DDQA 3Q3QA 3S16K 1I6HK 3HOXK 3BP8C 3RZOK 4P5BA 3TFJA 3GTPK 4QJVA 2PA8D 1F7VA 4XLPA 2L3UA 4A3MK 4Y52C 1O27A 1ZBSA 4G0WA 2NVXK 5IP7K 3FHZA 3PO2K 4C3IK 1TWFC 4GTBA 4Q4ZA 4O2DA 4LK1A 2RH6A 5IYCK 1XZPA 1WQGA 3ERED 2R92K 2E2IK 1UV7A 5L46A 3EQLA 5IYDC 2A6HA 3SZZA 1B4BA 4KN7A 5C3EK 4QJVB 4NOIA 2JA6K 1Y1VK 1YNNA 3HKZD 3H3VD 3VA7A 2Y3PA 1EFWA 4RMFA 1XZPB 5IORA 2JA5K 1F9NA 1Y1WC 3S0XA 1XPPA 2YU9K 3HOYK 5IOTA 5JVOA 4P5AA 1JQWA 3T01A 1BDFA 2ZFZA 4XCHA 2Y0SL 3HOWK 4KC6A 5TMCA 5C4XC 2ZUFA 4A3BC 5M3FK 3N0BA 4FM9A 2R93A 5DM6S 5TJ3A 2CFAA 3PO3K 4WFNS 2ZJPS 4IO9S 2KPUA 1O2FB 3I4MK 4A3IC 2E2HA 5M3MK 4KM8A 1VJEA 4KAWX 1PJ7A 2R93C 1XXCA 4Q5SA 2VUMC 4J3NA 4GTDA 1IS1A 3GTJK 4IOCS 3S1MC 4C2MC 4KN4A 4MQ9A 1ZQ1C 3S2DC 1FEUA 4A3LC 1J6XA 2JA8C 4LJZA 2B63K 3RZDK 3OPFA 4LLGA 3HOUK 4WFBS 2CW0A 3S1QC 4C3JK 1DCHA 3HOVC 2CFAB 3FOEA 4A3EK 3GTQK 4GTCA 2Y0SD 3T02A 4A3GC 5C4JC 4BBSC 1YCLA 3BP3A 3TTGA 3OREA 2PHCB 3GTKC 1TWGA 2A69A 4G0VA 1YX2A 2NVYA 3K7AK 3AQOA 4A3FK 4G7OA 1O26A 1O2AA 2NVTC 4KARA 1SMYA 3FKIC 4KB4A 1WCMK 2R7ZA 3GSIA 3L4JA 4WFAS 1AB4A 1I50C 1TWGC 2GSOA 4GTFA 1DD5A 1K83A 2NVYC 3GEIA 5DM7S 5M5YK 3S17K 3M4OC 3GTMK 1WQFA 4WJ3M 3HKZL 2R7ZC 3CQZK 2PMZL 4AH6A 4BXXK 1Y1WK 1J6VA 1TWCA 1TWHK 3HOZK 4X6AC 1I3QA 5FJ8K 4OIRA 1K83C 1USMA 4GTEA 4GTLA 2JA7K 4MEYA 5C4XK 1F93A 5HL7S 1C0AA 4LK0A 5IYBC 4Y7NC 1TWCC 4C3HK 3T00A 1I3QC 3QX3A 5IP9K 4WILA 4A3KC 4KM9A 2XCRB 3TFIA 1BGWA 4QIWL 3GTLA 2P5MA 4WCES 1HI9A 1HQMA 2O5JA 1IL2A 1IW7A 3H0GK 3GTLC 4A3DC 2JA8K 1KQ4A 4YFNA 3A8JA 4KMDA 2E2JC 1V5VA 2PMZD 2NVQK 3S14K 3S15K 5FLMK 3AH5A 3CF5S 4KB2A 2EBBA 1SFOK 1DCOA 4MEXA 3M3YC 5JVHS 2KWAA 3IPJA 4YG2A 2WAQL 1R9TK 3I4NK 3GTKK 4A93K 5EGHA 3GTMA 5C44C 1O24A 4QIWD 3DXJA 1ISEA 1TWHA 1IBAA 1GE9A 1I50K 3S1NC 3GTOK 1TWAK 2ZUEA 4PAAA 4OIPA 3GTPA 3GTGK 4XSZA 4A3CK 4IOAS 4BBRK 3S1RK 3S16C 4GT9A 1I6HC 3HOXC 3RZOC 2FQOA 2NVXA 4G7ZA
chains in the Genus database with same CATH topology
3GTPC 2A69A 3GTPK 3K7AC 5M5WK 4QJVA 4A3JC 3K7AK 4A3FC 2PA8D 4A3FK 4G7OA 4XLPA 2NVTC 1WCMC 4Y7NK 1SMYA 3FKIC 4Y52C 1WCMK 4A3MK 2NVTK 3FKIK 2E2HC 4Y52K 2NVXC 5IP7C 3PO2C 1YNJA 2NVXK 5IP7K 4C3IC 3PO2K 1I50C 4C3IK 1TWGC 1TWFC 4XLNA 3WODA 4G7HA 1TWFK 1TWGK 2NVYC 4Q4ZA 2WAQD 5IYCC 3GTMC 3S17C 3M4OC 4LK1A 2NVYK 5IYCK 5M5YK 3GTMK 3S17K 4BY1K 3M4OK 4BY7K 2R92C 3CQZC 3HKZL 4GZYA 2E2IC 2R7ZC 4BXXC 2PMZL 3CQZK 2E2IK 4OINA 4ZH4A 1Y1WK 2R92K 1TWHC 3HOZC 2R7ZK 4BXXK 1TWHK 3HOZK 3S2HK 4X6AC 5FJ8K 3EQLA 5IYDC 2A6HA 4X6AK 5IYDK 4OIRA 4KN7A 1K83C 4KMUA 5C3EC 1K83K 5C3EK 2WB1L 2JA7C 2JA7K 4MEYA 5C4XK 4QJVB 4NOIA 5IYBC 4LK0A 2JA6K 1Y1VC 4C3HC 4Y7NC 4A3MC 5IYBK 1TWCC 1Y1VK 4C3HK 1YNNA 5IP9C 1TWCK 1I3QC 3HKZD 3H3VD 5IP9K 5M5XK 1I3QK 2PPBA 4AYBL 4A3KC 4A3KK 3RZOK 4QIWL 4OIQA 4BY1C 4BY7C 2JA5K 3M3YK 1Y1WC 2YU9C 3HOYC 4JK1A 1XPPA 2YU9K 3HOYK 3S2HC 1HQMA 2O5JA 1IW7A 1BDFA 3HOWC 3H0GC 2Y0SL 3HOWK 3H0GK 3GTLC 4YFXA 5TMCA 5C44K 5C4XC 3GTLK 4A3BC 4YFKA 2JA6C 4A3DC 5M3FK 4A3BK 2JA8K 4A3DK 4YFNA 3S14C 2NVQC 2E2JC 3S15C 5FLMC 2PMZD 2BE5A 2E2JK 2NVQK 5FLMK 3S14K 3S15K 2PA8L 1SFOC 3PO3C 1SFOK 3PO3K 4OIOA 1I6VA 2O5IA 4MEXA 2JA5C 3M3YC 3I4MK 2WB1D 1ZYRA 4A3IC 5M3MK 4A3IK 3I4NC 1R9TC 4YG2A 2R93C 2WAQL 1R9TK 3I4NK 4Q5SA 2VUMC 2R93K 3GTJC 3GTKK 2VUMK 4A93C 3GTJK 4A93K 3S1MC 4AYBD 2A6EA 4KN4A 4MQ9A 4C2MC 3S2DC 4C2MK 4A3JK 3S1MK 3S2DK 5C44C 4A3LC 4A3LK 4QIWD 3DXJA 2B63C 3RZDC 4LJZA 2JA8C 2E2HK 2B63K 3RZDK 3HOUC 4LLGA 3HOUK 5TMFA 3GTOC 3S1NC 1TWAC 4XSXA 1I50K 2CW0A 3GTOK 4C3JC 1TWAK 3S1NK 3S1QC 4C3JK 4OIPA 3S1QK 3HOVC 2A68A 3GTGC 3HOVK 4A3EC 4A3CC 3GTQC 3GTGK 4XSZA 4A3EK 3GTQK 3H3VL 4A3CK 4BBRC 4BBRK 2Y0SD 3I4MC 5D4DA 4A3GC 5C4JC 3S1RC 4BBSC 4A3GK 5C4JK 3S1RK 4BBSK 3S16C 1I6HC 3HOXC 3RZOC 3S16K 1I6HK 3HOXK 4G7ZA 3GTKC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTP C;  2A69 A;  3GTP K;  3K7A C;  5M5W K;  4QJV A;  4A3J C;  3K7A K;  4A3F C;  2PA8 D;  4A3F K;  4G7O A;  4XLP A;  2NVT C;  1WCM C;  4Y7N K;  1SMY A;  3FKI C;  4Y52 C;  1WCM K;  4A3M K;  2NVT K;  3FKI K;  2E2H C;  4Y52 K;  2NVX C;  5IP7 C;  3PO2 C;  1YNJ A;  2NVX K;  5IP7 K;  4C3I C;  3PO2 K;  1I50 C;  4C3I K;  1TWG C;  1TWF C;  4XLN A;  3WOD A;  4G7H A;  1TWF K;  1TWG K;  2NVY C;  4Q4Z A;  2WAQ D;  5IYC C;  3GTM C;  3S17 C;  3M4O C;  4LK1 A;  2NVY K;  5IYC K;  5M5Y K;  3GTM K;  3S17 K;  4BY1 K;  3M4O K;  4BY7 K;  2R92 C;  3CQZ C;  3HKZ L;  4GZY A;  2E2I C;  2R7Z C;  4BXX C;  2PMZ L;  3CQZ K;  2E2I K;  4OIN A;  4ZH4 A;  1Y1W K;  2R92 K;  1TWH C;  3HOZ C;  2R7Z K;  4BXX K;  1TWH K;  3HOZ K;  3S2H K;  4X6A C;  5FJ8 K;  3EQL A;  5IYD C;  2A6H A;  4X6A K;  5IYD K;  4OIR A;  4KN7 A;  1K83 C;  4KMU A;  5C3E C;  1K83 K;  5C3E K;  2WB1 L;  2JA7 C;  2JA7 K;  4MEY A;  5C4X K;  4QJV B;  4NOI A;  5IYB C;  4LK0 A;  2JA6 K;  1Y1V C;  4C3H C;  4Y7N C;  4A3M C;  5IYB K;  1TWC C;  1Y1V K;  4C3H K;  1YNN A;  5IP9 C;  1TWC K;  1I3Q C;  3HKZ D;  3H3V D;  5IP9 K;  5M5X K;  1I3Q K;  2PPB A;  4AYB L;  4A3K C;  4A3K K;  3RZO K;  4QIW L;  4OIQ A;  4BY1 C;  4BY7 C;  2JA5 K;  3M3Y K;  1Y1W C;  2YU9 C;  3HOY C;  4JK1 A;  1XPP A;  2YU9 K;  3HOY K;  3S2H C;  1HQM A;  2O5J A;  1IW7 A;  1BDF A;  3HOW C;  3H0G C;  2Y0S L;  3HOW K;  3H0G K;  3GTL C;  4YFX A;  5TMC A;  5C44 K;  5C4X C;  3GTL K;  4A3B C;  4YFK A;  2JA6 C;  4A3D C;  5M3F K;  4A3B K;  2JA8 K;  4A3D K;  4YFN A;  3S14 C;  2NVQ C;  2E2J C;  3S15 C;  5FLM C;  2PMZ D;  2BE5 A;  2E2J K;  2NVQ K;  5FLM K;  3S14 K;  3S15 K;  2PA8 L;  1SFO C;  3PO3 C;  1SFO K;  3PO3 K;  4OIO A;  1I6V A;  2O5I A;  4MEX A;  2JA5 C;  3M3Y C;  3I4M K;  2WB1 D;  1ZYR A;  4A3I C;  5M3M K;  4A3I K;  3I4N C;  1R9T C;  4YG2 A;  2R93 C;  2WAQ L;  1R9T K;  3I4N K;  4Q5S A;  2VUM C;  2R93 K;  3GTJ C;  3GTK K;  2VUM K;  4A93 C;  3GTJ K;  4A93 K;  3S1M C;  4AYB D;  2A6E A;  4KN4 A;  4MQ9 A;  4C2M C;  3S2D C;  4C2M K;  4A3J K;  3S1M K;  3S2D K;  5C44 C;  4A3L C;  4A3L K;  4QIW D;  3DXJ A;  2B63 C;  3RZD C;  4LJZ A;  2JA8 C;  2E2H K;  2B63 K;  3RZD K;  3HOU C;  4LLG A;  3HOU K;  5TMF A;  3GTO C;  3S1N C;  1TWA C;  4XSX A;  1I50 K;  2CW0 A;  3GTO K;  4C3J C;  1TWA K;  3S1N K;  3S1Q C;  4C3J K;  4OIP A;  3S1Q K;  3HOV C;  2A68 A;  3GTG C;  3HOV K;  4A3E C;  4A3C C;  3GTQ C;  3GTG K;  4XSZ A;  4A3E K;  3GTQ K;  3H3V L;  4A3C K;  4BBR C;  4BBR K;  2Y0S D;  3I4M C;  5D4D A;  4A3G C;  5C4J C;  3S1R C;  4BBS C;  4A3G K;  5C4J K;  3S1R K;  4BBS K;  3S16 C;  1I6H C;  3HOX C;  3RZO C;  3S16 K;  1I6H K;  3HOX K;  4G7Z A;  3GTK C; 
#chains in the Genus database with same CATH topology
 3GTP C;  1J6W A;  5M5W K;  1ZVU A;  3AD9 C;  3GDZ A;  4Y7N K;  3NUH A;  2R92 A;  2E2I A;  4Y52 K;  2E2H C;  2NVX C;  5IP7 C;  3PO2 C;  4C3I C;  3OEP A;  1TWF K;  5E68 A;  2GSN A;  2WAQ D;  5IYC C;  2KXY A;  1XXB A;  2R92 C;  4GZY A;  2E2I C;  2JA6 A;  4BKW A;  4ZH4 A;  1Y1V A;  2KQ1 A;  5IOQ A;  4WJ4 A;  5IYD K;  5C3E C;  1EH1 A;  2V6T A;  1PJ6 A;  1EQR A;  2JA5 A;  1Y1V C;  4LQY A;  2YU9 A;  1O2B A;  2V6U A;  4AYB L;  1WOS A;  3PIO S;  1VRQ C;  4BY1 C;  4BY7 C;  3M3Y K;  2XCQ A;  4KMH A;  1F7U A;  2YU9 C;  3HOY C;  4JK1 A;  4WF9 S;  3S2H C;  3GEE A;  4P9S A;  1WSR A;  1TWA A;  3HOW C;  3GTG A;  3G4A A;  3LAJ A;  5C44 K;  3FOF A;  1B4A A;  4A3B K;  1XXA A;  4FZB A;  1XZQ A;  1WSV A;  4KAT A;  5JVG S;  3GTJ A;  3PO3 C;  2GAG C;  2O5I A;  2XCO A;  2B63 A;  1RU0 A;  3A8I A;  4A3I K;  4G0U A;  3L4K A;  4KDD A;  1WOP A;  1TWF A;  2R93 K;  3GTJ C;  1PJ5 A;  2VUM K;  4AYB D;  3S1M K;  4C2M K;  3S2D K;  3GTQ A;  3SZY A;  5JFE A;  4A3L K;  2GSU A;  2B63 C;  3RZD C;  2E2H K;  3HOU C;  1DCP A;  4C3J C;  2D6F C;  1XZQ B;  4BLB A;  3S1Q K;  2A68 A;  3CAG A;  3HOV K;  4A3E C;  1VH2 A;  3GTQ C;  2W7V A;  1BJT A;  4ILD A;  1WOR A;  3DLL S;  2P8T A;  4GFQ A;  3MML B;  1WCM A;  4KAS A;  1WQH A;  4A3G K;  5C4J K;  4BBS K;  4KMA A;  3K7A C;  3LYW A;  4A3J C;  4A3F C;  2JH3 A;  1WCM C;  1VGX A;  3CQZ A;  2NVT K;  4LR2 A;  1Y1W A;  3FKI K;  3ADA C;  1YNJ A;  3AD7 C;  1X31 C;  3GIR A;  4LOW A;  1O25 A;  4XLN A;  3WOD A;  4G7H A;  1TWG K;  1VLO A;  4M1X A;  3S17 C;  3GTM C;  2NVY K;  2JA7 A;  1WIH A;  3M4O K;  4BY1 K;  4BY7 K;  3CQZ C;  1L0W A;  4BXX C;  2R7Z K;  4OIN A;  1TWH C;  3HOZ C;  3S2H K;  3N0C A;  5HL8 A;  5IOS A;  4X6A K;  3BUE A;  4KMU A;  1K83 K;  3LPX A;  2WB1 L;  2JA7 C;  4C3H C;  4A3M C;  4BLA A;  5IYB K;  5IP9 C;  1TWC K;  1USO A;  5M5X K;  5CHP A;  1I3Q K;  2PPB A;  1WOO A;  2VUM A;  4A3K K;  1EI6 A;  4OIQ A;  3H0G A;  3AD8 C;  1IQ0 A;  3GEH A;  5HQH A;  2V6S A;  1J98 A;  3H0G C;  1INN A;  1SFO A;  4YFX A;  3GTL K;  3V4G A;  4PAB A;  4YFK A;  2JA6 C;  2GAH C;  4A3D K;  3S14 C;  2NVQ C;  1O29 A;  3S15 C;  5FLM C;  1JVI A;  2BE5 A;  1R9T A;  2E2J K;  2PA8 L;  3GTK A;  1SFO C;  2L5N A;  4OIO A;  1I6V A;  3PIP S;  1JOE A;  2FQT A;  2JA5 C;  1BS2 A;  2WB1 D;  3FKI A;  1ZYR A;  1O28 A;  5EGE A;  3I4N C;  1R9T C;  4GTA A;  1I50 A;  3GTO A;  3A8K A;  1IE0 A;  4A93 C;  5CJ9 A;  3G4C A;  2A6E A;  4A3J K;  2RGR A;  1EK8 A;  3JST A;  1ZXO A;  3HXA A;  5TMF A;  3GTO C;  1G51 A;  1TWA C;  4XSX A;  3N3Y A;  3TFH A;  3S1N K;  4U67 S;  2ZJQ S;  3LAP A;  3GTG C;  4A3C C;  3H3V L;  4BBR C;  2ZJR S;  3I4M C;  4C45 A;  5D4D A;  3AQP A;  3S1R C;  4DDQ A;  3Q3Q A;  3S16 K;  1I6H K;  3HOX K;  3BP8 C;  3RZO K;  4P5B A;  3TFJ A;  3GTP K;  4QJV A;  2PA8 D;  1F7V A;  4XLP A;  2L3U A;  4A3M K;  4Y52 C;  1O27 A;  1ZBS A;  4G0W A;  2NVX K;  5IP7 K;  3FHZ A;  3PO2 K;  4C3I K;  1TWF C;  4GTB A;  4Q4Z A;  4O2D A;  4LK1 A;  2RH6 A;  5IYC K;  1XZP A;  1WQG A;  3ERE D;  2R92 K;  2E2I K;  1UV7 A;  5L46 A;  3EQL A;  5IYD C;  2A6H A;  3SZZ A;  1B4B A;  4KN7 A;  5C3E K;  4QJV B;  4NOI A;  2JA6 K;  1Y1V K;  1YNN A;  3HKZ D;  3H3V D;  3VA7 A;  2Y3P A;  1EFW A;  4RMF A;  1XZP B;  5IOR A;  2JA5 K;  1F9N A;  1Y1W C;  3S0X A;  1XPP A;  2YU9 K;  3HOY K;  5IOT A;  5JVO A;  4P5A A;  1JQW A;  3T01 A;  1BDF A;  2ZFZ A;  4XCH A;  2Y0S L;  3HOW K;  4KC6 A;  5TMC A;  5C4X C;  2ZUF A;  4A3B C;  5M3F K;  3N0B A;  4FM9 A;  2R93 A;  5DM6 S;  5TJ3 A;  2CFA A;  3PO3 K;  4WFN S;  2ZJP S;  4IO9 S;  2KPU A;  1O2F B;  3I4M K;  4A3I C;  2E2H A;  5M3M K;  4KM8 A;  1VJE A;  4KAW X;  1PJ7 A;  2R93 C;  1XXC A;  4Q5S A;  2VUM C;  4J3N A;  4GTD A;  1IS1 A;  3GTJ K;  4IOC S;  3S1M C;  4C2M C;  4KN4 A;  4MQ9 A;  1ZQ1 C;  3S2D C;  1FEU A;  4A3L C;  1J6X A;  2JA8 C;  4LJZ A;  2B63 K;  3RZD K;  3OPF A;  4LLG A;  3HOU K;  4WFB S;  2CW0 A;  3S1Q C;  4C3J K;  1DCH A;  3HOV C;  2CFA B;  3FOE A;  4A3E K;  3GTQ K;  4GTC A;  2Y0S D;  3T02 A;  4A3G C;  5C4J C;  4BBS C;  1YCL A;  3BP3 A;  3TTG A;  3ORE A;  2PHC B;  3GTK C;  1TWG A;  2A69 A;  4G0V A;  1YX2 A;  2NVY A;  3K7A K;  3AQO A;  4A3F K;  4G7O A;  1O26 A;  1O2A A;  2NVT C;  4KAR A;  1SMY A;  3FKI C;  4KB4 A;  1WCM K;  2R7Z A;  3GSI A;  3L4J A;  4WFA S;  1AB4 A;  1I50 C;  1TWG C;  2GSO A;  4GTF A;  1DD5 A;  1K83 A;  2NVY C;  3GEI A;  5DM7 S;  5M5Y K;  3S17 K;  3M4O C;  3GTM K;  1WQF A;  4WJ3 M;  3HKZ L;  2R7Z C;  3CQZ K;  2PMZ L;  4AH6 A;  4BXX K;  1Y1W K;  1J6V A;  1TWC A;  1TWH K;  3HOZ K;  4X6A C;  1I3Q A;  5FJ8 K;  4OIR A;  1K83 C;  1USM A;  4GTE A;  4GTL A;  2JA7 K;  4MEY A;  5C4X K;  1F93 A;  5HL7 S;  1C0A A;  4LK0 A;  5IYB C;  4Y7N C;  1TWC C;  4C3H K;  3T00 A;  1I3Q C;  3QX3 A;  5IP9 K;  4WIL A;  4A3K C;  4KM9 A;  2XCR B;  3TFI A;  1BGW A;  4QIW L;  3GTL A;  2P5M A;  4WCE S;  1HI9 A;  1HQM A;  2O5J A;  1IL2 A;  1IW7 A;  3H0G K;  3GTL C;  4A3D C;  2JA8 K;  1KQ4 A;  4YFN A;  3A8J A;  4KMD A;  2E2J C;  1V5V A;  2PMZ D;  2NVQ K;  3S14 K;  3S15 K;  5FLM K;  3AH5 A;  3CF5 S;  4KB2 A;  2EBB A;  1SFO K;  1DCO A;  4MEX A;  3M3Y C;  5JVH S;  2KWA A;  3IPJ A;  4YG2 A;  2WAQ L;  1R9T K;  3I4N K;  3GTK K;  4A93 K;  5EGH A;  3GTM A;  5C44 C;  1O24 A;  4QIW D;  3DXJ A;  1ISE A;  1TWH A;  1IBA A;  1GE9 A;  1I50 K;  3S1N C;  3GTO K;  1TWA K;  2ZUE A;  4PAA A;  4OIP A;  3GTP A;  3GTG K;  4XSZ A;  4A3C K;  4IOA S;  4BBR K;  3S1R K;  3S16 C;  4GT9 A;  1I6H C;  3HOX C;  3RZO C;  2FQO A;  2NVX A;  4G7Z A; 
#chains in the Genus database with same CATH homology
 3GTP C;  2A69 A;  3GTP K;  3K7A C;  5M5W K;  4QJV A;  4A3J C;  3K7A K;  4A3F C;  2PA8 D;  4A3F K;  4G7O A;  4XLP A;  2NVT C;  1WCM C;  4Y7N K;  1SMY A;  3FKI C;  4Y52 C;  1WCM K;  4A3M K;  2NVT K;  3FKI K;  2E2H C;  4Y52 K;  2NVX C;  5IP7 C;  3PO2 C;  1YNJ A;  2NVX K;  5IP7 K;  4C3I C;  3PO2 K;  1I50 C;  4C3I K;  1TWG C;  1TWF C;  4XLN A;  3WOD A;  4G7H A;  1TWF K;  1TWG K;  2NVY C;  4Q4Z A;  2WAQ D;  5IYC C;  3GTM C;  3S17 C;  3M4O C;  4LK1 A;  2NVY K;  5IYC K;  5M5Y K;  3GTM K;  3S17 K;  4BY1 K;  3M4O K;  4BY7 K;  2R92 C;  3CQZ C;  3HKZ L;  4GZY A;  2E2I C;  2R7Z C;  4BXX C;  2PMZ L;  3CQZ K;  2E2I K;  4OIN A;  4ZH4 A;  1Y1W K;  2R92 K;  1TWH C;  3HOZ C;  2R7Z K;  4BXX K;  1TWH K;  3HOZ K;  3S2H K;  4X6A C;  5FJ8 K;  3EQL A;  5IYD C;  2A6H A;  4X6A K;  5IYD K;  4OIR A;  4KN7 A;  1K83 C;  4KMU A;  5C3E C;  1K83 K;  5C3E K;  2WB1 L;  2JA7 C;  2JA7 K;  4MEY A;  5C4X K;  4QJV B;  4NOI A;  5IYB C;  4LK0 A;  2JA6 K;  1Y1V C;  4C3H C;  4Y7N C;  4A3M C;  5IYB K;  1TWC C;  1Y1V K;  4C3H K;  1YNN A;  5IP9 C;  1TWC K;  1I3Q C;  3HKZ D;  3H3V D;  5IP9 K;  5M5X K;  1I3Q K;  2PPB A;  4AYB L;  4A3K C;  4A3K K;  3RZO K;  4QIW L;  4OIQ A;  4BY1 C;  4BY7 C;  2JA5 K;  3M3Y K;  1Y1W C;  2YU9 C;  3HOY C;  4JK1 A;  1XPP A;  2YU9 K;  3HOY K;  3S2H C;  1HQM A;  2O5J A;  1IW7 A;  1BDF A;  3HOW C;  3H0G C;  2Y0S L;  3HOW K;  3H0G K;  3GTL C;  4YFX A;  5TMC A;  5C44 K;  5C4X C;  3GTL K;  4A3B C;  4YFK A;  2JA6 C;  4A3D C;  5M3F K;  4A3B K;  2JA8 K;  4A3D K;  4YFN A;  3S14 C;  2NVQ C;  2E2J C;  3S15 C;  5FLM C;  2PMZ D;  2BE5 A;  2E2J K;  2NVQ K;  5FLM K;  3S14 K;  3S15 K;  2PA8 L;  1SFO C;  3PO3 C;  1SFO K;  3PO3 K;  4OIO A;  1I6V A;  2O5I A;  4MEX A;  2JA5 C;  3M3Y C;  3I4M K;  2WB1 D;  1ZYR A;  4A3I C;  5M3M K;  4A3I K;  3I4N C;  1R9T C;  4YG2 A;  2R93 C;  2WAQ L;  1R9T K;  3I4N K;  4Q5S A;  2VUM C;  2R93 K;  3GTJ C;  3GTK K;  2VUM K;  4A93 C;  3GTJ K;  4A93 K;  3S1M C;  4AYB D;  2A6E A;  4KN4 A;  4MQ9 A;  4C2M C;  3S2D C;  4C2M K;  4A3J K;  3S1M K;  3S2D K;  5C44 C;  4A3L C;  4A3L K;  4QIW D;  3DXJ A;  2B63 C;  3RZD C;  4LJZ A;  2JA8 C;  2E2H K;  2B63 K;  3RZD K;  3HOU C;  4LLG A;  3HOU K;  5TMF A;  3GTO C;  3S1N C;  1TWA C;  4XSX A;  1I50 K;  2CW0 A;  3GTO K;  4C3J C;  1TWA K;  3S1N K;  3S1Q C;  4C3J K;  4OIP A;  3S1Q K;  3HOV C;  2A68 A;  3GTG C;  3HOV K;  4A3E C;  4A3C C;  3GTQ C;  3GTG K;  4XSZ A;  4A3E K;  3GTQ K;  3H3V L;  4A3C K;  4BBR C;  4BBR K;  2Y0S D;  3I4M C;  5D4D A;  4A3G C;  5C4J C;  3S1R C;  4BBS C;  4A3G K;  5C4J K;  3S1R K;  4BBS K;  3S16 C;  1I6H C;  3HOX C;  3RZO C;  3S16 K;  1I6H K;  3HOX K;  4G7Z A;  3GTK C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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