3S1NC

Rna polymerase ii initiation complex with a 5-nt rna (variant 2)
Total Genus 63

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (7-13)TI8 (204-207)TI1 (14-17)S12 (227-234)S2 (17-23)AH1 (27-40)EMPTYS10 (152-163)AH4 (240-264)3H4 (168-170)S3 (42-54)S4 (72-73)TIV4 (148-151)AH2 (60-69)S8 (131-132)TI'1 (124-127)TIV2 (74-77)3H1 (77-79)TI2 (92-95)S7 (119-120)TIV3 (88-91)3H3 (115-117)S5 (96-104)S9 (143-147)S6 (111-114)S11 (173-180)TI7 (184-187)AH3 (197-200)TVIII2 (187-190)TIV6 (193-196)TIV7 (214-217)TVIII3 (236-239)TI5 (164-167)TI4 (136-139)TIV5 (163-166)3H5 (207-209)TI6 (181-184)TIV1 (22-25)3H2 (83-85)Updating...
connected with : NaN
molecule tags Transcription/rna/dna
publication title Initiation complex structure and promoter proofreading.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 63
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3s1nC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3s1nC01
4X6AK 3S14C 2R93C 1I6HC 4XSZA 4LLGA 5IYDK 3HKZL 3GTQK 3S16K 3GTMK 1I6VA 3EQLA 3HKZD 3HOXC 2NVTC 1WCMK 4A3IK 4YFNA 4XLPA 3M3YC 3GTPC 4A3LK 1TWHK 1K83K 1TWFK 1R9TC 3GTKK 5C3EC 2E2JC 5IYBC 2R7ZK 4A3BK 3HOYC 4JK1A 4KN4A 4A3EC 4C3HK 5FJ8K 4A3FK 4A3BC 3HOVK 5M3FK 5M3MK 4OIQA 3S2DK 5IYDC 3S16C 4QJVA 4MEXA 2A6EA 3GTMC 4Y7NK 3S1QK 2Y0SL 1YNJA 4KMUA 3GTOK 2NVXK 3RZDK 1WCMC 2NVYK 3WODA 4BBRK 4A3LC 2WAQL 2Y0SD 3S17K 3S2HK 1K83C 1TWFC 3GTKC 2JA8K 4C3JK 3HOWK 4YFXA 2R7ZC 1TWAK 4LK1A 4C3HC 3S15C 5M5YK 4BY1C 3S1MK 2WAQD 2JA5C 2JA6C 1SFOK 5IP7K 1Y1VK 4Y7NC 4Q4ZA 3HOUK 5FLMK 4OINA 3S1QC 3K7AK 4Q5SA 5M5XK 4A3CK 2BE5A 2NVXC 3RZDC 1I3QC 4YG2A 4C2MC 3H0GC 3GTJK 3HOZC 3I4MK 2R92C 1SMYA 2O5IA 2E2IC 5C4XC 3HOWC 4C3JC 3GTLK 1BDFA 1IW7A 3CQZK 1SFOC 1TWCK 4QIWL 4A93K 3FKIK 3RZOK 4Y52K 3GTQC 5C4JK 2NVQK 1I50K 3HOUC 5C44K 3K7AC 5D4DA 1YNNA 4QIWD 4A3CC 5IYCK 2B63C 2B63K 3I4NK 4A3IC 1TWHC 3GTJC 1TWGK 3PO2K 3I4MC 4AYBL 2A69A 3GTLC 4OIRA 3HOVC 4A3FC 4A3KK 1Y1WK 3GTGK 4A3MK 4G7HA 3CQZC 4AYBD 1TWCC 4Y52C 3S2DC 3FKIC 3PO3K 5C4JC 2NVQC 2E2HK 4NOIA 5C44C 3GTOC 4XLNA 4A3EK 4A3DK 5IYCC 5IP9K 2NVYC 3I4NC 2A6HA 4BBRC 3S17C 3PO2C 3S2HC 2JA8C 4BXXK 3M4OK 1TWAC 3S1MC 4A3GK 3S1NK 4A3KC 4G7OA 2PMZL 4C3IK 3HOXK 4LK0A 4A3MC 4GZYA 3S1RK 2NVTK 3GTPK 4BBSK 5IP7C 2E2JK 5IYBK 1Y1VC 2CW0A 4A3JK 4LJZA 2PMZD 5FLMC 2PPBA 1XPPA 1HQMA 4A3DC 4OIOA 5IP9C 4BY7K 2YU9K 2A68A 4MEYA 4BXXC 3M4OC 2WB1L 5M5WK 2VUMK 4A3GC 3S1NC 4C3IC 3S1RC 4G7ZA 5TMFA 2O5JA 4MQ9A 4A93C 3RZOC 4BBSC 4X6AC 2JA7K 2WB1D 3H3VL 1I50C 4YFKA 4A3JC 3S15K 3S14K 4BY1K 1ZYRA 5TMCA 2R93K 4KN7A 2JA5K 2JA6K 1I6HK 3H3VD 4BY7C 1TWGC 2YU9C 2PA8L 4XSXA 4ZH4A 1Y1WC 4QJVB 2VUMC 3DXJA 3GTGC 3M3YK 2PA8D 1I3QK 4C2MK 3H0GK 3HOZK 3PO3C 1R9TK 5C3EK 5C4XK 2JA7C 2R92K 2E2IK 3HOYK 2E2HC 4OIPA
chains in the Genus database with same CATH superfamily
3PIOS 1IS1A 1TWCA 1I6HC 3FKIA 4XSZA 1I50A 1VRQC 3V4GA 1HI9A 4AH6A 5CJ9A 3HKZD 4A3IK 2EBBA 1TWGA 1O26A 1TWHK 4C45A 1K83K 4J3NA 5IYBC 3HOYC 4A3EC 4G0WA 4GT9A 4OIQA 3S2DK 2JA7A 4MEXA 2A6EA 5IOSA 1WIHA 4LQYA 3RZDK 4FM9A 4A3LC 2Y0SD 3S17K 5IOQA 4C3JK 2R7ZC 1WOPA 4KB4A 5M5YK 4BY1C 1VH2A 1SFOK 3MMLB 3GTPA 4Y7NC 3A8KA 3A8IA 4Q5SA 3NUHA 2ZJQS 1O28A 4O2DA 4A3CK 3CF5S 4C2MC 4YG2A 2CFAB 3H0GC 3HOZC 1WSVA 2O5IA 2E2IC 1L0WA 2ZFZA 1IW7A 3LYWA 4QIWL 1K83A 4DDQA 3K7AC 1YNNA 2JA6A 3AH5A 3I4NK 4A3IC 1TWHC 2ZJRS 1XZQB 3GTLC 1Y1WK 4A3KK 1VLOA 1ZQ1C 1JQWA 3CQZC 4Y52C 3S2DC 1R9TA 5C4JC 3BUEA 1EI6A 3GTQA 3FHZA 3S17C 1EH1A 3L4KA 4U67S 1XXCA 1ISEA 1F7UA 4A3GK 4G7OA 3ADAC 3HOXK 2B63A 4A3MC 1TWFA 4BLAA 2PMZD 1HQMA 4A3DC 5DM6S 4BY7K 5TJ3A 3LPXA 3M4OC 4GTBA 3N3YA 1X31C 2O5JA 1DD5A 4G7ZA 5FJ8K 4MQ9A 5DM7S 2L5NA 2WB1D 2ZUFA 3TFHA 1DCOA 1ZYRA 2W7VA 2JA5K 1I6HK 3H3VD 4M1XA 2JH3A 1Y1VA 4GFQA 3T01A 4G0UA 1Y1WC 1KQ4A 2VUMC 5C4XK 2R92K 3HOYK 4A3EK 4WFAS 3FOFA 1JVIA 3S14C 2R93C 4IOCS 3GIRA 1O29A 1EQRA 5EGHA 3EQLA 3HOXC 5EGEA 3N0CA 4A3LK 4KMHA 4P5BA 2R7ZK 4A3FK 3GTGA 1VJEA 1B4BA 5IYDC 1USMA 1UV7A 3GTMC 4Y7NK 3GTOK 3GSIA 4GTLA 2ZUEA 2NVYK 4P9SA 2WAQL 4BKWA 1PJ6A 3A8JA 1XZPA 5JFEA 1TWAK 4C3HC 2JA5C 4KAWX 5IP7K 2GSOA 4GTEA 5FLMK 4OINA 3K7AK 4WCES 1J6VA 2BE5A 2NVXC 2R92C 5C4XC 3GTLK 5HL7S 3DLLS 1BDFA 1J6WA 1AB4A 3CQZK 4Y52K 4A93K 4GTCA 1RU0A 5C4JK 2PHCB 4IO9S 1EK8A 3CAGA 2GAGC 3I4MC 4A3FC 4A3MK 3H0GA 1B4AA 3TFJA 4AYBD 1TWCC 1O27A 4KM8A 3FKIC 3PO3K 4KC6A 2E2IA 2E2HK 3QX3A 3GTOC 4XLNA 4A3DK 5IYCC 1GE9A 2NVYC 3PO2C 3M4OK 1TWAC 3N0BA 1TWHA 5IP7C 3T02A 2E2JK 5FLMC 2PPBA 1XPPA 3CQZA 5IP9C 2FQOA 2KPUA 1O2FB 4MEYA 2VUMK 1BS2A 4C3IC 4X6AC 5TMFA 4A93C 4A3JC 3S15K 3S14K 5TMCA 2R93K 1SFOA 2D6FC 2YU9C 2PA8L 5HL8A 3HXAA 1V5VA 1IE0A 2KWAA 3S0XA 1I3QK 3PO3C 4WF9S 4IOAS 2E2HC 2GSNA 5IYDK 3HKZL 3GTMK 3IPJA 5JVGS 4KM9A 2L3UA 4WFNS 4YFNA 3M3YC 1R9TC 2E2JC 4KN4A 3SZZA 4C3HK 1Y1WA 1IQ0A 1WSRA 2VUMA 5M3FK 1WOOA 5M3MK 3S16C 4QJVA 3BP8C 1ZBSA 2Y0SL 1JOEA 1J98A 2R93A 2NVXK 2V6UA 1WCMC 1INNA 4PAAA 1TWFC 2JA8K 3GTKC 2V6TA 3S15C 1J6XA 4KMDA 4KASA 5CHPA 1F7VA 4Q4ZA 5E68A 3S1QC 5M5XK 3OREA 1WQGA 2XCRB 1I3QC 3GTMA 3I4MK 1SMYA 1ZXOA 3HOWC 2RH6A 1TWCK 1IBAA 3FKIK 3RZOK 1I50K 3HOUC 3GEHA 4QIWD 2JA5A 5IYCK 1EFWA 1TWGK 3GTJC 3GDZA 4KB2A 3PO2K 2A69A 4GTAA 2P8TA 1C0AA 4OIRA 2P5MA 2NVXA 1F9NA 1WQFA 4G7HA 2XCQA 2R92A 2NVQC 2CFAA 5C44C 5IP9K 4KARA 2A6HA 1PJ5A 2JA8C 4LOWA 4PABA 2PMZL 2NVTK 4C3IK 4X6AK 5JVOA 4GZYA 3GTPK 2Y3PA 2R7ZA 2CW0A 4A3JK 1WORA 1XZQA 4OIOA 4FZBA 2FQTA 2YU9K 3ERED 1XXBA 4BXXC 3GTOA 2WB1L 1DCPA 3GEIA 3S1NC 2NVYA 3S1RC 4BBSC 3RZOC 3OEPA 3LAPA 3H3VL 1I50C 1TWAA 4YFKA 4KN7A 2JA6K 1FEUA 5JVHS 1TWGC 3BP3A 1WOSA 4KATA 3FOEA 5L46A 4XSXA 4ZH4A 3M3YK 2KXYA 2RGRA 1R9TK 5IOTA 2JA7C 3GTLA 1XXAA 4OIPA 3G4AA 1XZPB 1O25A 1O24A 4LLGA 3S16K 3GTQK 1I6VA 4KMAA 3OPFA 1WCMK 2B63K 2NVTC 4XLPA 3GTPC 2YU9A 3Q3QA 1BJTA 1TWFK 3GTKK 5C3EC 3HOVK 4JK1A 4A3BC 3TTGA 2V6SA 2E2HA 3GEEA 3S1QK 1YNJA 4KMUA 3WODA 4BBRK 4RMFA 2KQ1A 3S2HK 1K83C 3HOWK 4YFXA 4LK1A 3S1MK 2WAQD 2JA6C 2GSUA 1VGXA 4BLBA 1Y1VK 3HOUK 2GAHC 3T00A 3RZDC 1O2BA 3GTJK 4GTDA 1F93A 4C3JC 1WCMA 1SFOC 1WQHA 3GTQC 5IORA 3GTKA 2NVQK 3LAJA 5C44K 4KDDA 5D4DA 4A3CC 1DCHA 2B63C 3PIPS 4P5AA 4AYBL 3AD7C 3G4CA 3HOVC 2XCOA 4LR2A 3VA7A 4WJ4A 3GTGK 1I3QA 1USOA 1IL2A 4G0VA 4NOIA 2ZJPS 3AQOA 3I4NC 1YCLA 4BBRC 3S2HC 4BXXK 3S1MC 3S1NK 4A3KC 3S1RK 4LK0A 3GTJA 4BBSK 4GTFA 5IYBK 1Y1VC 4LJZA 1O2AA 4WJ3M 3AD8C 4WFBS 2A68A 4XCHA 3L4JA 1BGWA 5M5WK 4A3GC 1PJ7A 1ZVUA 3AQPA 2JA7K 3TFIA 4ILDA 4BY1K 4BY7C 1YX2A 1G51A 3AD9C 5HQHA 4QJVB 3DXJA 3GTGC 2PA8D 4C2MK 3H0GK 3HOZK 4WILA 3SZYA 5C3EK 2E2IK 3JSTA 4A3BK
chains in the Genus database with same CATH topology
4X6AK 3S14C 2R93C 1I6HC 4XSZA 4LLGA 5IYDK 3HKZL 3GTQK 3S16K 3GTMK 1I6VA 3EQLA 3HKZD 3HOXC 2NVTC 1WCMK 4A3IK 4YFNA 4XLPA 3M3YC 3GTPC 4A3LK 1TWHK 1K83K 1TWFK 1R9TC 3GTKK 5C3EC 2E2JC 5IYBC 2R7ZK 4A3BK 3HOYC 4JK1A 4KN4A 4A3EC 4C3HK 5FJ8K 4A3FK 4A3BC 3HOVK 5M3FK 5M3MK 4OIQA 3S2DK 5IYDC 3S16C 4QJVA 4MEXA 2A6EA 3GTMC 4Y7NK 3S1QK 2Y0SL 1YNJA 4KMUA 3GTOK 2NVXK 3RZDK 1WCMC 2NVYK 3WODA 4BBRK 4A3LC 2WAQL 2Y0SD 3S17K 3S2HK 1K83C 1TWFC 3GTKC 2JA8K 4C3JK 3HOWK 4YFXA 2R7ZC 1TWAK 4LK1A 4C3HC 3S15C 5M5YK 4BY1C 3S1MK 2WAQD 2JA5C 2JA6C 1SFOK 5IP7K 1Y1VK 4Y7NC 4Q4ZA 3HOUK 5FLMK 4OINA 3S1QC 3K7AK 4Q5SA 5M5XK 4A3CK 2BE5A 2NVXC 3RZDC 1I3QC 4YG2A 4C2MC 3H0GC 3GTJK 3HOZC 3I4MK 2R92C 1SMYA 2O5IA 2E2IC 5C4XC 3HOWC 4C3JC 3GTLK 1BDFA 1IW7A 3CQZK 1SFOC 1TWCK 4QIWL 4A93K 3FKIK 3RZOK 4Y52K 3GTQC 5C4JK 2NVQK 1I50K 3HOUC 5C44K 3K7AC 5D4DA 1YNNA 4QIWD 4A3CC 5IYCK 2B63C 2B63K 3I4NK 4A3IC 1TWHC 3GTJC 1TWGK 3PO2K 3I4MC 4AYBL 2A69A 3GTLC 4OIRA 3HOVC 4A3FC 4A3KK 1Y1WK 3GTGK 4A3MK 4G7HA 3CQZC 4AYBD 1TWCC 4Y52C 3S2DC 3FKIC 3PO3K 5C4JC 2NVQC 2E2HK 4NOIA 5C44C 3GTOC 4XLNA 4A3EK 4A3DK 5IYCC 5IP9K 2NVYC 3I4NC 2A6HA 4BBRC 3S17C 3PO2C 3S2HC 2JA8C 4BXXK 3M4OK 1TWAC 3S1MC 4A3GK 3S1NK 4A3KC 4G7OA 2PMZL 4C3IK 3HOXK 4LK0A 4A3MC 4GZYA 3S1RK 2NVTK 3GTPK 4BBSK 5IP7C 2E2JK 5IYBK 1Y1VC 2CW0A 4A3JK 4LJZA 2PMZD 5FLMC 2PPBA 1XPPA 1HQMA 4A3DC 4OIOA 5IP9C 4BY7K 2YU9K 2A68A 4MEYA 4BXXC 3M4OC 2WB1L 5M5WK 2VUMK 4A3GC 3S1NC 4C3IC 3S1RC 4G7ZA 5TMFA 2O5JA 4MQ9A 4A93C 3RZOC 4BBSC 4X6AC 2JA7K 2WB1D 3H3VL 1I50C 4YFKA 4A3JC 3S15K 3S14K 4BY1K 1ZYRA 5TMCA 2R93K 4KN7A 2JA5K 2JA6K 1I6HK 3H3VD 4BY7C 1TWGC 2YU9C 2PA8L 4XSXA 4ZH4A 1Y1WC 4QJVB 2VUMC 3DXJA 3GTGC 3M3YK 2PA8D 1I3QK 4C2MK 3H0GK 3HOZK 3PO3C 1R9TK 5C3EK 5C4XK 2JA7C 2R92K 2E2IK 3HOYK 2E2HC 4OIPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X6A K;  3S14 C;  2R93 C;  1I6H C;  4XSZ A;  4LLG A;  5IYD K;  3HKZ L;  3GTQ K;  3S16 K;  3GTM K;  1I6V A;  3EQL A;  3HKZ D;  3HOX C;  2NVT C;  1WCM K;  4A3I K;  4YFN A;  4XLP A;  3M3Y C;  3GTP C;  4A3L K;  1TWH K;  1K83 K;  1TWF K;  1R9T C;  3GTK K;  5C3E C;  2E2J C;  5IYB C;  2R7Z K;  4A3B K;  3HOY C;  4JK1 A;  4KN4 A;  4A3E C;  4C3H K;  5FJ8 K;  4A3F K;  4A3B C;  3HOV K;  5M3F K;  5M3M K;  4OIQ A;  3S2D K;  5IYD C;  3S16 C;  4QJV A;  4MEX A;  2A6E A;  3GTM C;  4Y7N K;  3S1Q K;  2Y0S L;  1YNJ A;  4KMU A;  3GTO K;  2NVX K;  3RZD K;  1WCM C;  2NVY K;  3WOD A;  4BBR K;  4A3L C;  2WAQ L;  2Y0S D;  3S17 K;  3S2H K;  1K83 C;  1TWF C;  3GTK C;  2JA8 K;  4C3J K;  3HOW K;  4YFX A;  2R7Z C;  1TWA K;  4LK1 A;  4C3H C;  3S15 C;  5M5Y K;  4BY1 C;  3S1M K;  2WAQ D;  2JA5 C;  2JA6 C;  1SFO K;  5IP7 K;  1Y1V K;  4Y7N C;  4Q4Z A;  3HOU K;  5FLM K;  4OIN A;  3S1Q C;  3K7A K;  4Q5S A;  5M5X K;  4A3C K;  2BE5 A;  2NVX C;  3RZD C;  1I3Q C;  4YG2 A;  4C2M C;  3H0G C;  3GTJ K;  3HOZ C;  3I4M K;  2R92 C;  1SMY A;  2O5I A;  2E2I C;  5C4X C;  3HOW C;  4C3J C;  3GTL K;  1BDF A;  1IW7 A;  3CQZ K;  1SFO C;  1TWC K;  4QIW L;  4A93 K;  3FKI K;  3RZO K;  4Y52 K;  3GTQ C;  5C4J K;  2NVQ K;  1I50 K;  3HOU C;  5C44 K;  3K7A C;  5D4D A;  1YNN A;  4QIW D;  4A3C C;  5IYC K;  2B63 C;  2B63 K;  3I4N K;  4A3I C;  1TWH C;  3GTJ C;  1TWG K;  3PO2 K;  3I4M C;  4AYB L;  2A69 A;  3GTL C;  4OIR A;  3HOV C;  4A3F C;  4A3K K;  1Y1W K;  3GTG K;  4A3M K;  4G7H A;  3CQZ C;  4AYB D;  1TWC C;  4Y52 C;  3S2D C;  3FKI C;  3PO3 K;  5C4J C;  2NVQ C;  2E2H K;  4NOI A;  5C44 C;  3GTO C;  4XLN A;  4A3E K;  4A3D K;  5IYC C;  5IP9 K;  2NVY C;  3I4N C;  2A6H A;  4BBR C;  3S17 C;  3PO2 C;  3S2H C;  2JA8 C;  4BXX K;  3M4O K;  1TWA C;  3S1M C;  4A3G K;  3S1N K;  4A3K C;  4G7O A;  2PMZ L;  4C3I K;  3HOX K;  4LK0 A;  4A3M C;  4GZY A;  3S1R K;  2NVT K;  3GTP K;  4BBS K;  5IP7 C;  2E2J K;  5IYB K;  1Y1V C;  2CW0 A;  4A3J K;  4LJZ A;  2PMZ D;  5FLM C;  2PPB A;  1XPP A;  1HQM A;  4A3D C;  4OIO A;  5IP9 C;  4BY7 K;  2YU9 K;  2A68 A;  4MEY A;  4BXX C;  3M4O C;  2WB1 L;  5M5W K;  2VUM K;  4A3G C;  3S1N C;  4C3I C;  3S1R C;  4G7Z A;  5TMF A;  2O5J A;  4MQ9 A;  4A93 C;  3RZO C;  4BBS C;  4X6A C;  2JA7 K;  2WB1 D;  3H3V L;  1I50 C;  4YFK A;  4A3J C;  3S15 K;  3S14 K;  4BY1 K;  1ZYR A;  5TMC A;  2R93 K;  4KN7 A;  2JA5 K;  2JA6 K;  1I6H K;  3H3V D;  4BY7 C;  1TWG C;  2YU9 C;  2PA8 L;  4XSX A;  4ZH4 A;  1Y1W C;  4QJV B;  2VUM C;  3DXJ A;  3GTG C;  3M3Y K;  2PA8 D;  1I3Q K;  4C2M K;  3H0G K;  3HOZ K;  3PO3 C;  1R9T K;  5C3E K;  5C4X K;  2JA7 C;  2R92 K;  2E2I K;  3HOY K;  2E2H C;  4OIP A; 
#chains in the Genus database with same CATH topology
 3PIO S;  1IS1 A;  1TWC A;  1I6H C;  3FKI A;  4XSZ A;  1I50 A;  1VRQ C;  3V4G A;  1HI9 A;  4AH6 A;  5CJ9 A;  3HKZ D;  4A3I K;  2EBB A;  1TWG A;  1O26 A;  1TWH K;  4C45 A;  1K83 K;  4J3N A;  5IYB C;  3HOY C;  4A3E C;  4G0W A;  4GT9 A;  4OIQ A;  3S2D K;  2JA7 A;  4MEX A;  2A6E A;  5IOS A;  1WIH A;  4LQY A;  3RZD K;  4FM9 A;  4A3L C;  2Y0S D;  3S17 K;  5IOQ A;  4C3J K;  2R7Z C;  1WOP A;  4KB4 A;  5M5Y K;  4BY1 C;  1VH2 A;  1SFO K;  3MML B;  3GTP A;  4Y7N C;  3A8K A;  3A8I A;  4Q5S A;  3NUH A;  2ZJQ S;  1O28 A;  4O2D A;  4A3C K;  3CF5 S;  4C2M C;  4YG2 A;  2CFA B;  3H0G C;  3HOZ C;  1WSV A;  2O5I A;  2E2I C;  1L0W A;  2ZFZ A;  1IW7 A;  3LYW A;  4QIW L;  1K83 A;  4DDQ A;  3K7A C;  1YNN A;  2JA6 A;  3AH5 A;  3I4N K;  4A3I C;  1TWH C;  2ZJR S;  1XZQ B;  3GTL C;  1Y1W K;  4A3K K;  1VLO A;  1ZQ1 C;  1JQW A;  3CQZ C;  4Y52 C;  3S2D C;  1R9T A;  5C4J C;  3BUE A;  1EI6 A;  3GTQ A;  3FHZ A;  3S17 C;  1EH1 A;  3L4K A;  4U67 S;  1XXC A;  1ISE A;  1F7U A;  4A3G K;  4G7O A;  3ADA C;  3HOX K;  2B63 A;  4A3M C;  1TWF A;  4BLA A;  2PMZ D;  1HQM A;  4A3D C;  5DM6 S;  4BY7 K;  5TJ3 A;  3LPX A;  3M4O C;  4GTB A;  3N3Y A;  1X31 C;  2O5J A;  1DD5 A;  4G7Z A;  5FJ8 K;  4MQ9 A;  5DM7 S;  2L5N A;  2WB1 D;  2ZUF A;  3TFH A;  1DCO A;  1ZYR A;  2W7V A;  2JA5 K;  1I6H K;  3H3V D;  4M1X A;  2JH3 A;  1Y1V A;  4GFQ A;  3T01 A;  4G0U A;  1Y1W C;  1KQ4 A;  2VUM C;  5C4X K;  2R92 K;  3HOY K;  4A3E K;  4WFA S;  3FOF A;  1JVI A;  3S14 C;  2R93 C;  4IOC S;  3GIR A;  1O29 A;  1EQR A;  5EGH A;  3EQL A;  3HOX C;  5EGE A;  3N0C A;  4A3L K;  4KMH A;  4P5B A;  2R7Z K;  4A3F K;  3GTG A;  1VJE A;  1B4B A;  5IYD C;  1USM A;  1UV7 A;  3GTM C;  4Y7N K;  3GTO K;  3GSI A;  4GTL A;  2ZUE A;  2NVY K;  4P9S A;  2WAQ L;  4BKW A;  1PJ6 A;  3A8J A;  1XZP A;  5JFE A;  1TWA K;  4C3H C;  2JA5 C;  4KAW X;  5IP7 K;  2GSO A;  4GTE A;  5FLM K;  4OIN A;  3K7A K;  4WCE S;  1J6V A;  2BE5 A;  2NVX C;  2R92 C;  5C4X C;  3GTL K;  5HL7 S;  3DLL S;  1BDF A;  1J6W A;  1AB4 A;  3CQZ K;  4Y52 K;  4A93 K;  4GTC A;  1RU0 A;  5C4J K;  2PHC B;  4IO9 S;  1EK8 A;  3CAG A;  2GAG C;  3I4M C;  4A3F C;  4A3M K;  3H0G A;  1B4A A;  3TFJ A;  4AYB D;  1TWC C;  1O27 A;  4KM8 A;  3FKI C;  3PO3 K;  4KC6 A;  2E2I A;  2E2H K;  3QX3 A;  3GTO C;  4XLN A;  4A3D K;  5IYC C;  1GE9 A;  2NVY C;  3PO2 C;  3M4O K;  1TWA C;  3N0B A;  1TWH A;  5IP7 C;  3T02 A;  2E2J K;  5FLM C;  2PPB A;  1XPP A;  3CQZ A;  5IP9 C;  2FQO A;  2KPU A;  1O2F B;  4MEY A;  2VUM K;  1BS2 A;  4C3I C;  4X6A C;  5TMF A;  4A93 C;  4A3J C;  3S15 K;  3S14 K;  5TMC A;  2R93 K;  1SFO A;  2D6F C;  2YU9 C;  2PA8 L;  5HL8 A;  3HXA A;  1V5V A;  1IE0 A;  2KWA A;  3S0X A;  1I3Q K;  3PO3 C;  4WF9 S;  4IOA S;  2E2H C;  2GSN A;  5IYD K;  3HKZ L;  3GTM K;  3IPJ A;  5JVG S;  4KM9 A;  2L3U A;  4WFN S;  4YFN A;  3M3Y C;  1R9T C;  2E2J C;  4KN4 A;  3SZZ A;  4C3H K;  1Y1W A;  1IQ0 A;  1WSR A;  2VUM A;  5M3F K;  1WOO A;  5M3M K;  3S16 C;  4QJV A;  3BP8 C;  1ZBS A;  2Y0S L;  1JOE A;  1J98 A;  2R93 A;  2NVX K;  2V6U A;  1WCM C;  1INN A;  4PAA A;  1TWF C;  2JA8 K;  3GTK C;  2V6T A;  3S15 C;  1J6X A;  4KMD A;  4KAS A;  5CHP A;  1F7V A;  4Q4Z A;  5E68 A;  3S1Q C;  5M5X K;  3ORE A;  1WQG A;  2XCR B;  1I3Q C;  3GTM A;  3I4M K;  1SMY A;  1ZXO A;  3HOW C;  2RH6 A;  1TWC K;  1IBA A;  3FKI K;  3RZO K;  1I50 K;  3HOU C;  3GEH A;  4QIW D;  2JA5 A;  5IYC K;  1EFW A;  1TWG K;  3GTJ C;  3GDZ A;  4KB2 A;  3PO2 K;  2A69 A;  4GTA A;  2P8T A;  1C0A A;  4OIR A;  2P5M A;  2NVX A;  1F9N A;  1WQF A;  4G7H A;  2XCQ A;  2R92 A;  2NVQ C;  2CFA A;  5C44 C;  5IP9 K;  4KAR A;  2A6H A;  1PJ5 A;  2JA8 C;  4LOW A;  4PAB A;  2PMZ L;  2NVT K;  4C3I K;  4X6A K;  5JVO A;  4GZY A;  3GTP K;  2Y3P A;  2R7Z A;  2CW0 A;  4A3J K;  1WOR A;  1XZQ A;  4OIO A;  4FZB A;  2FQT A;  2YU9 K;  3ERE D;  1XXB A;  4BXX C;  3GTO A;  2WB1 L;  1DCP A;  3GEI A;  3S1N C;  2NVY A;  3S1R C;  4BBS C;  3RZO C;  3OEP A;  3LAP A;  3H3V L;  1I50 C;  1TWA A;  4YFK A;  4KN7 A;  2JA6 K;  1FEU A;  5JVH S;  1TWG C;  3BP3 A;  1WOS A;  4KAT A;  3FOE A;  5L46 A;  4XSX A;  4ZH4 A;  3M3Y K;  2KXY A;  2RGR A;  1R9T K;  5IOT A;  2JA7 C;  3GTL A;  1XXA A;  4OIP A;  3G4A A;  1XZP B;  1O25 A;  1O24 A;  4LLG A;  3S16 K;  3GTQ K;  1I6V A;  4KMA A;  3OPF A;  1WCM K;  2B63 K;  2NVT C;  4XLP A;  3GTP C;  2YU9 A;  3Q3Q A;  1BJT A;  1TWF K;  3GTK K;  5C3E C;  3HOV K;  4JK1 A;  4A3B C;  3TTG A;  2V6S A;  2E2H A;  3GEE A;  3S1Q K;  1YNJ A;  4KMU A;  3WOD A;  4BBR K;  4RMF A;  2KQ1 A;  3S2H K;  1K83 C;  3HOW K;  4YFX A;  4LK1 A;  3S1M K;  2WAQ D;  2JA6 C;  2GSU A;  1VGX A;  4BLB A;  1Y1V K;  3HOU K;  2GAH C;  3T00 A;  3RZD C;  1O2B A;  3GTJ K;  4GTD A;  1F93 A;  4C3J C;  1WCM A;  1SFO C;  1WQH A;  3GTQ C;  5IOR A;  3GTK A;  2NVQ K;  3LAJ A;  5C44 K;  4KDD A;  5D4D A;  4A3C C;  1DCH A;  2B63 C;  3PIP S;  4P5A A;  4AYB L;  3AD7 C;  3G4C A;  3HOV C;  2XCO A;  4LR2 A;  3VA7 A;  4WJ4 A;  3GTG K;  1I3Q A;  1USO A;  1IL2 A;  4G0V A;  4NOI A;  2ZJP S;  3AQO A;  3I4N C;  1YCL A;  4BBR C;  3S2H C;  4BXX K;  3S1M C;  3S1N K;  4A3K C;  3S1R K;  4LK0 A;  3GTJ A;  4BBS K;  4GTF A;  5IYB K;  1Y1V C;  4LJZ A;  1O2A A;  4WJ3 M;  3AD8 C;  4WFB S;  2A68 A;  4XCH A;  3L4J A;  1BGW A;  5M5W K;  4A3G C;  1PJ7 A;  1ZVU A;  3AQP A;  2JA7 K;  3TFI A;  4ILD A;  4BY1 K;  4BY7 C;  1YX2 A;  1G51 A;  3AD9 C;  5HQH A;  4QJV B;  3DXJ A;  3GTG C;  2PA8 D;  4C2M K;  3H0G K;  3HOZ K;  4WIL A;  3SZY A;  5C3E K;  2E2I K;  3JST A;  4A3B K; 
#chains in the Genus database with same CATH homology
 4X6A K;  3S14 C;  2R93 C;  1I6H C;  4XSZ A;  4LLG A;  5IYD K;  3HKZ L;  3GTQ K;  3S16 K;  3GTM K;  1I6V A;  3EQL A;  3HKZ D;  3HOX C;  2NVT C;  1WCM K;  4A3I K;  4YFN A;  4XLP A;  3M3Y C;  3GTP C;  4A3L K;  1TWH K;  1K83 K;  1TWF K;  1R9T C;  3GTK K;  5C3E C;  2E2J C;  5IYB C;  2R7Z K;  4A3B K;  3HOY C;  4JK1 A;  4KN4 A;  4A3E C;  4C3H K;  5FJ8 K;  4A3F K;  4A3B C;  3HOV K;  5M3F K;  5M3M K;  4OIQ A;  3S2D K;  5IYD C;  3S16 C;  4QJV A;  4MEX A;  2A6E A;  3GTM C;  4Y7N K;  3S1Q K;  2Y0S L;  1YNJ A;  4KMU A;  3GTO K;  2NVX K;  3RZD K;  1WCM C;  2NVY K;  3WOD A;  4BBR K;  4A3L C;  2WAQ L;  2Y0S D;  3S17 K;  3S2H K;  1K83 C;  1TWF C;  3GTK C;  2JA8 K;  4C3J K;  3HOW K;  4YFX A;  2R7Z C;  1TWA K;  4LK1 A;  4C3H C;  3S15 C;  5M5Y K;  4BY1 C;  3S1M K;  2WAQ D;  2JA5 C;  2JA6 C;  1SFO K;  5IP7 K;  1Y1V K;  4Y7N C;  4Q4Z A;  3HOU K;  5FLM K;  4OIN A;  3S1Q C;  3K7A K;  4Q5S A;  5M5X K;  4A3C K;  2BE5 A;  2NVX C;  3RZD C;  1I3Q C;  4YG2 A;  4C2M C;  3H0G C;  3GTJ K;  3HOZ C;  3I4M K;  2R92 C;  1SMY A;  2O5I A;  2E2I C;  5C4X C;  3HOW C;  4C3J C;  3GTL K;  1BDF A;  1IW7 A;  3CQZ K;  1SFO C;  1TWC K;  4QIW L;  4A93 K;  3FKI K;  3RZO K;  4Y52 K;  3GTQ C;  5C4J K;  2NVQ K;  1I50 K;  3HOU C;  5C44 K;  3K7A C;  5D4D A;  1YNN A;  4QIW D;  4A3C C;  5IYC K;  2B63 C;  2B63 K;  3I4N K;  4A3I C;  1TWH C;  3GTJ C;  1TWG K;  3PO2 K;  3I4M C;  4AYB L;  2A69 A;  3GTL C;  4OIR A;  3HOV C;  4A3F C;  4A3K K;  1Y1W K;  3GTG K;  4A3M K;  4G7H A;  3CQZ C;  4AYB D;  1TWC C;  4Y52 C;  3S2D C;  3FKI C;  3PO3 K;  5C4J C;  2NVQ C;  2E2H K;  4NOI A;  5C44 C;  3GTO C;  4XLN A;  4A3E K;  4A3D K;  5IYC C;  5IP9 K;  2NVY C;  3I4N C;  2A6H A;  4BBR C;  3S17 C;  3PO2 C;  3S2H C;  2JA8 C;  4BXX K;  3M4O K;  1TWA C;  3S1M C;  4A3G K;  3S1N K;  4A3K C;  4G7O A;  2PMZ L;  4C3I K;  3HOX K;  4LK0 A;  4A3M C;  4GZY A;  3S1R K;  2NVT K;  3GTP K;  4BBS K;  5IP7 C;  2E2J K;  5IYB K;  1Y1V C;  2CW0 A;  4A3J K;  4LJZ A;  2PMZ D;  5FLM C;  2PPB A;  1XPP A;  1HQM A;  4A3D C;  4OIO A;  5IP9 C;  4BY7 K;  2YU9 K;  2A68 A;  4MEY A;  4BXX C;  3M4O C;  2WB1 L;  5M5W K;  2VUM K;  4A3G C;  3S1N C;  4C3I C;  3S1R C;  4G7Z A;  5TMF A;  2O5J A;  4MQ9 A;  4A93 C;  3RZO C;  4BBS C;  4X6A C;  2JA7 K;  2WB1 D;  3H3V L;  1I50 C;  4YFK A;  4A3J C;  3S15 K;  3S14 K;  4BY1 K;  1ZYR A;  5TMC A;  2R93 K;  4KN7 A;  2JA5 K;  2JA6 K;  1I6H K;  3H3V D;  4BY7 C;  1TWG C;  2YU9 C;  2PA8 L;  4XSX A;  4ZH4 A;  1Y1W C;  4QJV B;  2VUM C;  3DXJ A;  3GTG C;  3M3Y K;  2PA8 D;  1I3Q K;  4C2M K;  3H0G K;  3HOZ K;  3PO3 C;  1R9T K;  5C3E K;  5C4X K;  2JA7 C;  2R92 K;  2E2I K;  3HOY K;  2E2H C;  4OIP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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