3WOD | Genus

Total Genus 39

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	39
sequence length	225
structure length	225
Chain Sequence	LKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQA

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase/transcription
source organism	Thermus phage p23-45
publication title	Structural basis for promoter specificity switching of RNA polymerase by a phage factor. pubmed doi rcsb
molecule keywords	DNA-directed RNA polymerase subunit alpha
total genus	39
structure length	225
sequence length	225
chains with identical sequence	B
ec nomenclature	ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date	2013-12-26

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01000	RNA_pol_A_bac	RNA polymerase Rpb3/RpoA insert domain
A	PF01193	RNA_pol_L	RNA polymerase Rpb3/Rpb11 dimerisation domain
A	PF03118	RNA_pol_A_CTD	Bacterial RNA polymerase, alpha chain C terminal domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.170.120.12	Mainly Beta	Beta Complex	RNA Polymerase Alpha Subunit; Chain A, domain 2	DNA-directed RNA polymerase, insert domain	3wodA02
3.30.1360.10	Alpha Beta	2-Layer Sandwich	Gyrase A; domain 2	RNA polymerase, RBP11-like subunit	3wodA01

5IP9C 4Q5SA 5FLMK 1SFOC 2NVQK 2A68A 4C2MK 1I6HK 1Y1WC 5FLMC 2O5IA 5D4DA 5C44K 2NVQC 5M5XK 4XSXA 2E2JK 4BY7K 4Y52K 2WB1D 4C2MC 4A3IC 1I6HC 4Y52C 4OINA 5C44C 3CQZK 4BY7C 2E2JC 5IYCC 5C4JK 3GTPC 4MQ9A 3CQZC 5TMCA 5C4JC 5C4XK 1I50K 2WAQL 4G7OA 1Y1VK 3RZOK 1TWCK 5TMFA 1I50C 1YNJA 3GTQC 1TWAK 1TWGK 4C3HK 1Y1VC 3GTMK 4KMUA 3RZOC 3HKZD 1TWCC 3PO3K 4BY1K 4OIPA 2E2IK 1TWGC 4C3HC 2WB1L 3I4NK 3GTMC 2B63K 3S14K 2JA5C 3S1RK 3PO3C 1I3QK 4BY1C 4XLNA 2E2IC 1Y1WK 2BE5A 2B63C 3S14C 3I4NC 3S1RC 1I3QC 4A3IK 2NVXK 4A3FK 3HOUC 5IP7K 4BXXC 4A93K 5IYCK 1XPPA 3PO2K 4AYBD 4OIOA 3GTPK 2NVXC 4A3FC 2VUMK 2O5JA 5IP7C 4GZYA 4A93C 1R9TK 2YU9K 3HKZL 2PPBA 4X6AK 3PO2C 3S17K 2VUMC 2YU9C 1R9TC 1I6VA 4OIQA 2JA8C 5M5YK 3GTGK 4X6AC 4KN4A 3S17C 5M3MK 5M5WK 4NOIA 4A3EK 2A6HA 3GTGC 4QJVB 4XLPA 3FKIK 3GTJK 2JA5K 4KN7A 4A3EC 2PA8D 4YFXA 5FJ8K 2JA7K 3FKIC 3HOWK 4LK1A 4AYBL 3GTJC 2JA7C 4A3GC 3HOWC 3HOXC 3HOUK 4YFNA 4C3IK 3HOYK 1BDFA 1TWFK 4BXXK 4A3LK 4QIWD 1K83K 3DXJA 4C3IC 3HOYC 1TWFC 2R92K 2Y0SD 4A3LC 4A3BK 3K7AK 2NVYC 4C3JK 1K83C 2A69A 2JA8K 1ZYRA 2R92C 4A3BC 3K7AC 2PA8L 3H0GK 3H3VD 4A3DK 3S1NK 3H0GC 4YG2A 4MEYA 3HOZK 3M3YK 3S2HK 4JK1A 4G7ZA 4Y7NK 4A3JK 4G7HA 1YNNA 4A3CK 1HQMA 5IYDK 4A3DC 5M3FK 3S2HC 3HOZC 1TWHC 5IYDC 3S1NC 3M3YC 2CW0A 2WAQD 4Y7NC 4A3JC 4A3CC 2R93C 3EQLA 4QIWL 2JA6K 3HOVC 3S16C 4C3JC 2Y0SL 5C3EC 5C3EK 3HOXK 4A3GK 1TWAC 2JA6C 3S2DK 4A3KK 4A3MK 4LJZA 3S1QK 3GTLK 1IW7A 2PMZD 3S2DC 4A3KC 4A3MC 3M4OK 3S1QC 2NVYK 3GTOK 3H3VL 3GTLC 2A6EA 4OIRA 3M4OC 4QJVA 3S1MK 3GTOC 2R7ZK 5IYBK 2E2HK 4BBSC 4ZH4A 4YFKA 3S15K 3S1MC 2R7ZC 3GTKK 5IYBC 5C4XC 2E2HC 1WCMK 2NVTK 3S15C 3I4MK 4LLGA 1SMYA 3GTKC 1TWHK 4BBRK 3RZDK 3GTQK 2R93K 4BBSK 1WCMC 2NVTC 5IP9K 2PMZL 3I4MC 3HOVK 1SFOK 3WODA 3RZDC 4XSZA 3S16K 4BBRC 4Q4ZA 4LK0A 4MEXA
chains in the Genus database with same CATH superfamily

1TWFA 3Q3QA 3FOEA 1I6HK 1Y1WC 5FLMC 5M5XK 4O2DA 4LR2A 3AD8C 3OPFA 4Y52C 5C44C 3CQZK 1JOEA 3DLLS 4WFAS 4IOAS 3FOFA 2R93A 2GSNA 3OREA 1Y1VC 3RZOC 3HKZD 3VA7A 1JQWA 1TWGC 4C3HC 2B63K 3IPJA 3S1RK 1I3QK 2E2IC 1GE9A 3GTLA 3I4NC 3QX3A 5EGHA 3GTOA 1JVIA 4A3FK 3HOUC 4GTBA 4WILA 4GTDA 2NVXC 1YX2A 2O5JA 5IP7C 3BUEA 1R9TK 3HKZL 4LQYA 3GTKA 2VUMC 4KB4A 2YU9C 1IQ0A 4X6AC 5M3MK 4FZBA 5M5WK 3T00A 3GTGC 4QJVB 1SFOA 3FKIK 3N0BA 4YFXA 3GTJC 3BP8C 2JA7C 3HOXC 4IOCS 1EI6A 1TWFK 4QIWD 5JVGS 3HOYC 4C3IC 4A3BK 4A3LC 1KQ4A 2KWAA 4ILDA 1K83C 3CF5S 5JVOA 3ERED 1X31C 3TFJA 4BKWA 3GTMA 3H3VD 3S1NK 3S2HK 1O27A 4MEYA 5IYDK 4JK1A 4A3CK 1ZQ1C 4C3JK 1PJ7A 3M3YC 5C3EK 1J98A 4QIWL 4GTAA 3S2DK 2ZJRS 3LYWA 3S1QK 3BP3A 3GTLK 1IW7A 2PMZD 4PABA 3M4OK 2NVYK 3GTOK 3A8IA 3H3VL 1ZVUA 3LAPA 1O28A 1IL2A 1VH2A 5IYBK 4YFKA 3S15K 1O25A 4BLAA 3GTKK 4U67S 1WCMK 1TWHK 5DM7S 5HL7S 2NVTC 4WFNS 1G51A 2PMZL 3I4MC 3S16K 1SFOK 1USOA 4BBSC 4LK0A 1DCPA 5IP9C 5IOTA 1WOSA 5EGEA 1WSVA 4C2MK 3AD9C 2O5IA 3G4CA 4KDDA 2NVQC 4J3NA 2E2JK 2WB1D 4RMFA 3GEIA 4OINA 1WQFA 1IS1A 4BY7C 3ADAC 5CHPA 5C4JC 5C4XK 2WAQL 1PJ5A 1F7VA 4KM9A 5TMFA 1I50C 1TWAA 3A8KA 4KMUA 3GTMK 1TWCC 4OIPA 2WB1L 3OEPA 3PO3C 1YCLA 4BY1C 4P9SA 3LPXA 3S14C 1USMA 1C0AA 1WQHA 1O29A 3L4KA 5IOSA 1XPPA 3PO2K 1AB4A 3GTPK 2R7ZA 4A93C 4KMAA 4AH6A 3NUHA 4KN4A 3S17C 3SZZA 3GTQA 4NOIA 1IBAA 4A3EK 4XLPA 1V5VA 1L0WA 1XZPA 2JA5K 1Y1WA 2ZFZA 1B4BA 4GTLA 2CFAA 3HOWK 4LK1A 4BXXK 1BDFA 5DM6S 1EK8A 3GIRA 1O24A 2KQ1A 2NVYC 1PJ6A 5HL8A 2JA8K 1ZYRA 2R92C 1Y1VA 3K7AC 1TWGA 4A3DK 3H0GC 3HOZK 1UV7A 4G7ZA 4A3JK 2E2IA 3GEEA 1TWHC 2L5NA 2CW0A 4Y7NC 4G0UA 3S16C 3AQPA 4XCHA 1O2FB 2JA6C 1VLOA 2NVXA 4A3MK 4LJZA 4WJ3M 4A3KC 2VUMA 4LOWA 3SZYA 2YU9A 4M1XA 2A6EA 3S1MK 2R7ZK 1DD5A 3GTGA 4ZH4A 2P5MA 5C4XC 2E2HC 1WQGA 1EH1A 3GTJA 1SMYA 5CJ9A 3GTQK 2R93K 2JA7A 3MMLB 1XXBA 3RZDC 1WOPA 4BBRC 4MEXA 4Q5SA 3V4GA 5FLMK 1XZQA 3GDZA 2V6TA 4G0WA 3TFIA 1K83A 4Y52K 5D4DA 1XZPB 5C44K 4XSXA 2D6FC 1I6HC 5JVHS 1F7UA 1WSRA 3GTPC 3CQZC 1J6VA 2L3UA 1ZXOA 2EBBA 4FM9A 1Y1VK 2Y3PA 3RZOK 1YNJA 1TWGK 4C3HK 3CAGA 1B4AA 5TJ3A 1WORA 2V6SA 2E2IK 3I4NK 3PIPS 2JA5C 1WOOA 4XLNA 2B63C 3S1RC 3AQOA 1I3QC 1XXCA 4A3IK 2NVXK 2XCOA 5IP7K 3S0XA 4BXXC 5IYCK 4AYBD 4OIOA 4A3FC 2VUMK 2YU9K 2PPBA 4X6AK 1F9NA 1R9TC 1I6VA 2JA8C 3GTGK 2A6HA 3GTJK 2FQTA 2JA7K 3FKIC 4AYBL 3TFHA 3AD7C 4GTEA 4YFNA 4C3IK 3HOYK 4PAAA 4A3LK 1K83K 1TWFC 4WF9S 2A69A 1I50A 4A3BC 2XCRB 1TWCA 3N3YA 1DCOA 4YG2A 1VJEA 4KC6A 3M3YK 2RGRA 1YNNA 4KARA 1HQMA 5M3FK 3S1NC 3S2HC 1BS2A 5IYDC 4IO9S 3JSTA 4DDQA 4A3CC 2R93C 4WJ4A 4C3JC 5C3EC 2ZUFA 4A3GK 1DCHA 2W7VA 1J6XA 4KAWX 1IE0A 2GSOA 3S2DC 2XCQA 3S1QC 1FEUA 3GSIA 3GTLC 4C45A 3N0CA 5IORA 3M4OC 3GTOC 4P5AA 3A8JA 5IYBC 3AH5A 2NVTK 4GTCA 1J6WA 3S15C 3I4MK 3GTKC 4BBSK 1WCMC 5IP9K 3HOVK 3WODA 2JH3A 4OIQA 3TTGA 1TWAK 4WCES 2KPUA 1SFOC 2FQOA 2NVQK 4KM8A 2A68A 2NVYA 4BY7K 2R92A 4C2MC 4A3IC 1XXAA 1EFWA 2E2JC 5IYCC 5C4JK 3PIOS 3H0GA 4P5BA 5HQHA 4MQ9A 1O2BA 1WCMA 5TMCA 1I50K 1TWHA 4G7OA 2KXYA 1TWCK 2JA6A 1VRQC 3PO3K 4BY1K 4KB2A 1INNA 3GTMC 3S14K 1Y1WK 2BE5A 4KASA 5IOQA 5L46A 4A93K 2CFAB 4G0VA 2E2HA 4GZYA 3PO2C 3S17K 4KATA 5M5YK 3FHZA 1VGXA 1O26A 4BLBA 2ZUEA 3T01A 4KN7A 4A3EC 2PA8D 3G4AA 2ZJPS 1RU0A 5FJ8K 1ZBSA 4A3GC 3HOWC 3HOUK 1WIHA 1EQRA 3LAJA 3GTPA 3CQZA 4KMHA 5E68A 3L4JA 3DXJA 2R92K 2Y0SD 2V6UA 3K7AK 4GTFA 4KMDA 2P8TA 2PA8L 3H0GK 1O2AA 2GSUA 2JA5A 4Y7NK 3GEHA 4G7HA 2B63A 4A3DC 2GAHC 3HOZC 1I3QA 2WAQD 1BGWA 4A3JC 2ZJQS 3EQLA 2JA6K 3HOVC 2Y0SL 1ISEA 3HOXK 1TWAC 4A3KK 4GT9A 4WFBS 4A3MC 1F93A 1R9TA 1HI9A 4OIRA 1XZQB 4QJVA 4GFQA 5JFEA 2E2HK 3T02A 1BJTA 3S1MC 2R7ZC 2RH6A 3FKIA 2PHCB 4LLGA 3RZDK 3HXAA 4BBRK 4XSZA 2GAGC 3GTQC 4Q4ZA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 5IP9 C;  4Q5S A;  5FLM K;  1SFO C;  2NVQ K;  2A68 A;  4C2M K;  1I6H K;  1Y1W C;  5FLM C;  2O5I A;  5D4D A;  5C44 K;  2NVQ C;  5M5X K;  4XSX A;  2E2J K;  4BY7 K;  4Y52 K;  2WB1 D;  4C2M C;  4A3I C;  1I6H C;  4Y52 C;  4OIN A;  5C44 C;  3CQZ K;  4BY7 C;  2E2J C;  5IYC C;  5C4J K;  3GTP C;  4MQ9 A;  3CQZ C;  5TMC A;  5C4J C;  5C4X K;  1I50 K;  2WAQ L;  4G7O A;  1Y1V K;  3RZO K;  1TWC K;  5TMF A;  1I50 C;  1YNJ A;  3GTQ C;  1TWA K;  1TWG K;  4C3H K;  1Y1V C;  3GTM K;  4KMU A;  3RZO C;  3HKZ D;  1TWC C;  3PO3 K;  4BY1 K;  4OIP A;  2E2I K;  1TWG C;  4C3H C;  2WB1 L;  3I4N K;  3GTM C;  2B63 K;  3S14 K;  2JA5 C;  3S1R K;  3PO3 C;  1I3Q K;  4BY1 C;  4XLN A;  2E2I C;  1Y1W K;  2BE5 A;  2B63 C;  3S14 C;  3I4N C;  3S1R C;  1I3Q C;  4A3I K;  2NVX K;  4A3F K;  3HOU C;  5IP7 K;  4BXX C;  4A93 K;  5IYC K;  1XPP A;  3PO2 K;  4AYB D;  4OIO A;  3GTP K;  2NVX C;  4A3F C;  2VUM K;  2O5J A;  5IP7 C;  4GZY A;  4A93 C;  1R9T K;  2YU9 K;  3HKZ L;  2PPB A;  4X6A K;  3PO2 C;  3S17 K;  2VUM C;  2YU9 C;  1R9T C;  1I6V A;  4OIQ A;  2JA8 C;  5M5Y K;  3GTG K;  4X6A C;  4KN4 A;  3S17 C;  5M3M K;  5M5W K;  4NOI A;  4A3E K;  2A6H A;  3GTG C;  4QJV B;  4XLP A;  3FKI K;  3GTJ K;  2JA5 K;  4KN7 A;  4A3E C;  2PA8 D;  4YFX A;  5FJ8 K;  2JA7 K;  3FKI C;  3HOW K;  4LK1 A;  4AYB L;  3GTJ C;  2JA7 C;  4A3G C;  3HOW C;  3HOX C;  3HOU K;  4YFN A;  4C3I K;  3HOY K;  1BDF A;  1TWF K;  4BXX K;  4A3L K;  4QIW D;  1K83 K;  3DXJ A;  4C3I C;  3HOY C;  1TWF C;  2R92 K;  2Y0S D;  4A3L C;  4A3B K;  3K7A K;  2NVY C;  4C3J K;  1K83 C;  2A69 A;  2JA8 K;  1ZYR A;  2R92 C;  4A3B C;  3K7A C;  2PA8 L;  3H0G K;  3H3V D;  4A3D K;  3S1N K;  3H0G C;  4YG2 A;  4MEY A;  3HOZ K;  3M3Y K;  3S2H K;  4JK1 A;  4G7Z A;  4Y7N K;  4A3J K;  4G7H A;  1YNN A;  4A3C K;  1HQM A;  5IYD K;  4A3D C;  5M3F K;  3S2H C;  3HOZ C;  1TWH C;  5IYD C;  3S1N C;  3M3Y C;  2CW0 A;  2WAQ D;  4Y7N C;  4A3J C;  4A3C C;  2R93 C;  3EQL A;  4QIW L;  2JA6 K;  3HOV C;  3S16 C;  4C3J C;  2Y0S L;  5C3E C;  5C3E K;  3HOX K;  4A3G K;  1TWA C;  2JA6 C;  3S2D K;  4A3K K;  4A3M K;  4LJZ A;  3S1Q K;  3GTL K;  1IW7 A;  2PMZ D;  3S2D C;  4A3K C;  4A3M C;  3M4O K;  3S1Q C;  2NVY K;  3GTO K;  3H3V L;  3GTL C;  2A6E A;  4OIR A;  3M4O C;  4QJV A;  3S1M K;  3GTO C;  2R7Z K;  5IYB K;  2E2H K;  4BBS C;  4ZH4 A;  4YFK A;  3S15 K;  3S1M C;  2R7Z C;  3GTK K;  5IYB C;  5C4X C;  2E2H C;  1WCM K;  2NVT K;  3S15 C;  3I4M K;  4LLG A;  1SMY A;  3GTK C;  1TWH K;  4BBR K;  3RZD K;  3GTQ K;  2R93 K;  4BBS K;  1WCM C;  2NVT C;  5IP9 K;  2PMZ L;  3I4M C;  3HOV K;  1SFO K;  3WOD A;  3RZD C;  4XSZ A;  3S16 K;  4BBR C;  4Q4Z A;  4LK0 A;  4MEX A; 
#chains in the Genus database with same CATH topology
 1TWF A;  3Q3Q A;  3FOE A;  1I6H K;  1Y1W C;  5FLM C;  5M5X K;  4O2D A;  4LR2 A;  3AD8 C;  3OPF A;  4Y52 C;  5C44 C;  3CQZ K;  1JOE A;  3DLL S;  4WFA S;  4IOA S;  3FOF A;  2R93 A;  2GSN A;  3ORE A;  1Y1V C;  3RZO C;  3HKZ D;  3VA7 A;  1JQW A;  1TWG C;  4C3H C;  2B63 K;  3IPJ A;  3S1R K;  1I3Q K;  2E2I C;  1GE9 A;  3GTL A;  3I4N C;  3QX3 A;  5EGH A;  3GTO A;  1JVI A;  4A3F K;  3HOU C;  4GTB A;  4WIL A;  4GTD A;  2NVX C;  1YX2 A;  2O5J A;  5IP7 C;  3BUE A;  1R9T K;  3HKZ L;  4LQY A;  3GTK A;  2VUM C;  4KB4 A;  2YU9 C;  1IQ0 A;  4X6A C;  5M3M K;  4FZB A;  5M5W K;  3T00 A;  3GTG C;  4QJV B;  1SFO A;  3FKI K;  3N0B A;  4YFX A;  3GTJ C;  3BP8 C;  2JA7 C;  3HOX C;  4IOC S;  1EI6 A;  1TWF K;  4QIW D;  5JVG S;  3HOY C;  4C3I C;  4A3B K;  4A3L C;  1KQ4 A;  2KWA A;  4ILD A;  1K83 C;  3CF5 S;  5JVO A;  3ERE D;  1X31 C;  3TFJ A;  4BKW A;  3GTM A;  3H3V D;  3S1N K;  3S2H K;  1O27 A;  4MEY A;  5IYD K;  4JK1 A;  4A3C K;  1ZQ1 C;  4C3J K;  1PJ7 A;  3M3Y C;  5C3E K;  1J98 A;  4QIW L;  4GTA A;  3S2D K;  2ZJR S;  3LYW A;  3S1Q K;  3BP3 A;  3GTL K;  1IW7 A;  2PMZ D;  4PAB A;  3M4O K;  2NVY K;  3GTO K;  3A8I A;  3H3V L;  1ZVU A;  3LAP A;  1O28 A;  1IL2 A;  1VH2 A;  5IYB K;  4YFK A;  3S15 K;  1O25 A;  4BLA A;  3GTK K;  4U67 S;  1WCM K;  1TWH K;  5DM7 S;  5HL7 S;  2NVT C;  4WFN S;  1G51 A;  2PMZ L;  3I4M C;  3S16 K;  1SFO K;  1USO A;  4BBS C;  4LK0 A;  1DCP A;  5IP9 C;  5IOT A;  1WOS A;  5EGE A;  1WSV A;  4C2M K;  3AD9 C;  2O5I A;  3G4C A;  4KDD A;  2NVQ C;  4J3N A;  2E2J K;  2WB1 D;  4RMF A;  3GEI A;  4OIN A;  1WQF A;  1IS1 A;  4BY7 C;  3ADA C;  5CHP A;  5C4J C;  5C4X K;  2WAQ L;  1PJ5 A;  1F7V A;  4KM9 A;  5TMF A;  1I50 C;  1TWA A;  3A8K A;  4KMU A;  3GTM K;  1TWC C;  4OIP A;  2WB1 L;  3OEP A;  3PO3 C;  1YCL A;  4BY1 C;  4P9S A;  3LPX A;  3S14 C;  1USM A;  1C0A A;  1WQH A;  1O29 A;  3L4K A;  5IOS A;  1XPP A;  3PO2 K;  1AB4 A;  3GTP K;  2R7Z A;  4A93 C;  4KMA A;  4AH6 A;  3NUH A;  4KN4 A;  3S17 C;  3SZZ A;  3GTQ A;  4NOI A;  1IBA A;  4A3E K;  4XLP A;  1V5V A;  1L0W A;  1XZP A;  2JA5 K;  1Y1W A;  2ZFZ A;  1B4B A;  4GTL A;  2CFA A;  3HOW K;  4LK1 A;  4BXX K;  1BDF A;  5DM6 S;  1EK8 A;  3GIR A;  1O24 A;  2KQ1 A;  2NVY C;  1PJ6 A;  5HL8 A;  2JA8 K;  1ZYR A;  2R92 C;  1Y1V A;  3K7A C;  1TWG A;  4A3D K;  3H0G C;  3HOZ K;  1UV7 A;  4G7Z A;  4A3J K;  2E2I A;  3GEE A;  1TWH C;  2L5N A;  2CW0 A;  4Y7N C;  4G0U A;  3S16 C;  3AQP A;  4XCH A;  1O2F B;  2JA6 C;  1VLO A;  2NVX A;  4A3M K;  4LJZ A;  4WJ3 M;  4A3K C;  2VUM A;  4LOW A;  3SZY A;  2YU9 A;  4M1X A;  2A6E A;  3S1M K;  2R7Z K;  1DD5 A;  3GTG A;  4ZH4 A;  2P5M A;  5C4X C;  2E2H C;  1WQG A;  1EH1 A;  3GTJ A;  1SMY A;  5CJ9 A;  3GTQ K;  2R93 K;  2JA7 A;  3MML B;  1XXB A;  3RZD C;  1WOP A;  4BBR C;  4MEX A;  4Q5S A;  3V4G A;  5FLM K;  1XZQ A;  3GDZ A;  2V6T A;  4G0W A;  3TFI A;  1K83 A;  4Y52 K;  5D4D A;  1XZP B;  5C44 K;  4XSX A;  2D6F C;  1I6H C;  5JVH S;  1F7U A;  1WSR A;  3GTP C;  3CQZ C;  1J6V A;  2L3U A;  1ZXO A;  2EBB A;  4FM9 A;  1Y1V K;  2Y3P A;  3RZO K;  1YNJ A;  1TWG K;  4C3H K;  3CAG A;  1B4A A;  5TJ3 A;  1WOR A;  2V6S A;  2E2I K;  3I4N K;  3PIP S;  2JA5 C;  1WOO A;  4XLN A;  2B63 C;  3S1R C;  3AQO A;  1I3Q C;  1XXC A;  4A3I K;  2NVX K;  2XCO A;  5IP7 K;  3S0X A;  4BXX C;  5IYC K;  4AYB D;  4OIO A;  4A3F C;  2VUM K;  2YU9 K;  2PPB A;  4X6A K;  1F9N A;  1R9T C;  1I6V A;  2JA8 C;  3GTG K;  2A6H A;  3GTJ K;  2FQT A;  2JA7 K;  3FKI C;  4AYB L;  3TFH A;  3AD7 C;  4GTE A;  4YFN A;  4C3I K;  3HOY K;  4PAA A;  4A3L K;  1K83 K;  1TWF C;  4WF9 S;  2A69 A;  1I50 A;  4A3B C;  2XCR B;  1TWC A;  3N3Y A;  1DCO A;  4YG2 A;  1VJE A;  4KC6 A;  3M3Y K;  2RGR A;  1YNN A;  4KAR A;  1HQM A;  5M3F K;  3S1N C;  3S2H C;  1BS2 A;  5IYD C;  4IO9 S;  3JST A;  4DDQ A;  4A3C C;  2R93 C;  4WJ4 A;  4C3J C;  5C3E C;  2ZUF A;  4A3G K;  1DCH A;  2W7V A;  1J6X A;  4KAW X;  1IE0 A;  2GSO A;  3S2D C;  2XCQ A;  3S1Q C;  1FEU A;  3GSI A;  3GTL C;  4C45 A;  3N0C A;  5IOR A;  3M4O C;  3GTO C;  4P5A A;  3A8J A;  5IYB C;  3AH5 A;  2NVT K;  4GTC A;  1J6W A;  3S15 C;  3I4M K;  3GTK C;  4BBS K;  1WCM C;  5IP9 K;  3HOV K;  3WOD A;  2JH3 A;  4OIQ A;  3TTG A;  1TWA K;  4WCE S;  2KPU A;  1SFO C;  2FQO A;  2NVQ K;  4KM8 A;  2A68 A;  2NVY A;  4BY7 K;  2R92 A;  4C2M C;  4A3I C;  1XXA A;  1EFW A;  2E2J C;  5IYC C;  5C4J K;  3PIO S;  3H0G A;  4P5B A;  5HQH A;  4MQ9 A;  1O2B A;  1WCM A;  5TMC A;  1I50 K;  1TWH A;  4G7O A;  2KXY A;  1TWC K;  2JA6 A;  1VRQ C;  3PO3 K;  4BY1 K;  4KB2 A;  1INN A;  3GTM C;  3S14 K;  1Y1W K;  2BE5 A;  4KAS A;  5IOQ A;  5L46 A;  4A93 K;  2CFA B;  4G0V A;  2E2H A;  4GZY A;  3PO2 C;  3S17 K;  4KAT A;  5M5Y K;  3FHZ A;  1VGX A;  1O26 A;  4BLB A;  2ZUE A;  3T01 A;  4KN7 A;  4A3E C;  2PA8 D;  3G4A A;  2ZJP S;  1RU0 A;  5FJ8 K;  1ZBS A;  4A3G C;  3HOW C;  3HOU K;  1WIH A;  1EQR A;  3LAJ A;  3GTP A;  3CQZ A;  4KMH A;  5E68 A;  3L4J A;  3DXJ A;  2R92 K;  2Y0S D;  2V6U A;  3K7A K;  4GTF A;  4KMD A;  2P8T A;  2PA8 L;  3H0G K;  1O2A A;  2GSU A;  2JA5 A;  4Y7N K;  3GEH A;  4G7H A;  2B63 A;  4A3D C;  2GAH C;  3HOZ C;  1I3Q A;  2WAQ D;  1BGW A;  4A3J C;  2ZJQ S;  3EQL A;  2JA6 K;  3HOV C;  2Y0S L;  1ISE A;  3HOX K;  1TWA C;  4A3K K;  4GT9 A;  4WFB S;  4A3M C;  1F93 A;  1R9T A;  1HI9 A;  4OIR A;  1XZQ B;  4QJV A;  4GFQ A;  5JFE A;  2E2H K;  3T02 A;  1BJT A;  3S1M C;  2R7Z C;  2RH6 A;  3FKI A;  2PHC B;  4LLG A;  3RZD K;  3HXA A;  4BBR K;  4XSZ A;  2GAG C;  3GTQ C;  4Q4Z A; 
#chains in the Genus database with same CATH homology
 5IP9 C;  4Q5S A;  5FLM K;  1SFO C;  2NVQ K;  2A68 A;  4C2M K;  1I6H K;  1Y1W C;  5FLM C;  2O5I A;  5D4D A;  5C44 K;  2NVQ C;  5M5X K;  4XSX A;  2E2J K;  4BY7 K;  4Y52 K;  2WB1 D;  4C2M C;  4A3I C;  1I6H C;  4Y52 C;  4OIN A;  5C44 C;  3CQZ K;  4BY7 C;  2E2J C;  5IYC C;  5C4J K;  3GTP C;  4MQ9 A;  3CQZ C;  5TMC A;  5C4J C;  5C4X K;  1I50 K;  2WAQ L;  4G7O A;  1Y1V K;  3RZO K;  1TWC K;  5TMF A;  1I50 C;  1YNJ A;  3GTQ C;  1TWA K;  1TWG K;  4C3H K;  1Y1V C;  3GTM K;  4KMU A;  3RZO C;  3HKZ D;  1TWC C;  3PO3 K;  4BY1 K;  4OIP A;  2E2I K;  1TWG C;  4C3H C;  2WB1 L;  3I4N K;  3GTM C;  2B63 K;  3S14 K;  2JA5 C;  3S1R K;  3PO3 C;  1I3Q K;  4BY1 C;  4XLN A;  2E2I C;  1Y1W K;  2BE5 A;  2B63 C;  3S14 C;  3I4N C;  3S1R C;  1I3Q C;  4A3I K;  2NVX K;  4A3F K;  3HOU C;  5IP7 K;  4BXX C;  4A93 K;  5IYC K;  1XPP A;  3PO2 K;  4AYB D;  4OIO A;  3GTP K;  2NVX C;  4A3F C;  2VUM K;  2O5J A;  5IP7 C;  4GZY A;  4A93 C;  1R9T K;  2YU9 K;  3HKZ L;  2PPB A;  4X6A K;  3PO2 C;  3S17 K;  2VUM C;  2YU9 C;  1R9T C;  1I6V A;  4OIQ A;  2JA8 C;  5M5Y K;  3GTG K;  4X6A C;  4KN4 A;  3S17 C;  5M3M K;  5M5W K;  4NOI A;  4A3E K;  2A6H A;  3GTG C;  4QJV B;  4XLP A;  3FKI K;  3GTJ K;  2JA5 K;  4KN7 A;  4A3E C;  2PA8 D;  4YFX A;  5FJ8 K;  2JA7 K;  3FKI C;  3HOW K;  4LK1 A;  4AYB L;  3GTJ C;  2JA7 C;  4A3G C;  3HOW C;  3HOX C;  3HOU K;  4YFN A;  4C3I K;  3HOY K;  1BDF A;  1TWF K;  4BXX K;  4A3L K;  4QIW D;  1K83 K;  3DXJ A;  4C3I C;  3HOY C;  1TWF C;  2R92 K;  2Y0S D;  4A3L C;  4A3B K;  3K7A K;  2NVY C;  4C3J K;  1K83 C;  2A69 A;  2JA8 K;  1ZYR A;  2R92 C;  4A3B C;  3K7A C;  2PA8 L;  3H0G K;  3H3V D;  4A3D K;  3S1N K;  3H0G C;  4YG2 A;  4MEY A;  3HOZ K;  3M3Y K;  3S2H K;  4JK1 A;  4G7Z A;  4Y7N K;  4A3J K;  4G7H A;  1YNN A;  4A3C K;  1HQM A;  5IYD K;  4A3D C;  5M3F K;  3S2H C;  3HOZ C;  1TWH C;  5IYD C;  3S1N C;  3M3Y C;  2CW0 A;  2WAQ D;  4Y7N C;  4A3J C;  4A3C C;  2R93 C;  3EQL A;  4QIW L;  2JA6 K;  3HOV C;  3S16 C;  4C3J C;  2Y0S L;  5C3E C;  5C3E K;  3HOX K;  4A3G K;  1TWA C;  2JA6 C;  3S2D K;  4A3K K;  4A3M K;  4LJZ A;  3S1Q K;  3GTL K;  1IW7 A;  2PMZ D;  3S2D C;  4A3K C;  4A3M C;  3M4O K;  3S1Q C;  2NVY K;  3GTO K;  3H3V L;  3GTL C;  2A6E A;  4OIR A;  3M4O C;  4QJV A;  3S1M K;  3GTO C;  2R7Z K;  5IYB K;  2E2H K;  4BBS C;  4ZH4 A;  4YFK A;  3S15 K;  3S1M C;  2R7Z C;  3GTK K;  5IYB C;  5C4X C;  2E2H C;  1WCM K;  2NVT K;  3S15 C;  3I4M K;  4LLG A;  1SMY A;  3GTK C;  1TWH K;  4BBR K;  3RZD K;  3GTQ K;  2R93 K;  4BBS K;  1WCM C;  2NVT C;  5IP9 K;  2PMZ L;  3I4M C;  3HOV K;  1SFO K;  3WOD A;  3RZD C;  4XSZ A;  3S16 K;  4BBR C;  4Q4Z A;  4LK0 A;  4MEX A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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3WODA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations