4A3CC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3cC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3cC01
3GTMK 5C4JC 2JA7K 3GTPK 2JA8K 2R92C 4A3CC 3GTJK 2BE5A 3HOYC 5IYCC 4BY7C 5C4JK 2NVQK 3H3VD 4BBSK 5IYCK 3GTKK 3WODA 3HOXC 2PA8D 1HQMA 5D4DA 4C3HC 4OIRA 1IW7A 1YNJA 5C3EC 3GTOK 2E2JK 4AYBL 2A68A 2NVYC 4XLPA 2JA5C 5M3MK 3CQZK 2E2HC 3S1NK 5IYBC 2R7ZC 4G7ZA 2NVTC 4C2MK 3HOUK 4A3FK 1I6HC 5FLMK 5IYBK 2O5JA 4A3LC 4X6AC 4QIWD 2E2IK 2WB1D 2R93K 4Y7NC 3GTLC 3K7AK 5IP7C 4X6AK 4YG2A 3GTLK 5IP7K 3GTMC 3HOZK 2PPBA 3GTPC 3S1QK 3HKZD 3GTJC 1TWGK 2NVQC 4BBSC 3HKZL 5M3FK 3GTKC 4G7OA 4OIPA 4QJVB 1BDFA 4KMUA 3GTOC 2E2JC 4OINA 3H3VL 2VUMK 1I50K 4ZH4A 5IP9K 3I4NC 2PA8L 3CQZC 4YFXA 3S1NC 4A93C 3S2DK 4OIOA 4JK1A 2PMZD 2Y0SD 4C2MC 3HOUC 3HOWK 4A3FC 5IYDC 1R9TK 3I4NK 5FLMC 4NOIA 4A93K 5C4XK 3RZDC 2WAQD 2E2IC 2R93C 4GZYA 3S14K 3S16K 5IYDK 3K7AC 5M5WK 3S17K 3RZDK 3S1MK 3GTQK 3HOZC 2A6EA 4G7HA 2A69A 3PO3K 4QIWL 3S1QC 2WB1L 1TWGC 1WCMK 4LLGA 1TWCK 4A3GC 5M5XK 1I3QC 4A3JK 5C44C 5M5YK 1TWFC 4A3GK 1I3QK 1Y1VK 5C44K 2CW0A 5TMCA 5FJ8K 3PO2K 1TWFK 2JA6K 3M3YK 4BXXK 4Y52C 1SFOK 4A3DK 3I4MK 2VUMC 1I50C 5IP9C 4KN4A 4Y52K 3S2DC 1K83C 4XSZA 4Q5SA 3HOWC 1R9TC 5TMFA 3FKIK 3H0GK 4A3EK 1K83K 5C4XC 1XPPA 2YU9K 2A6HA 4A3MK 3S16C 3RZOK 3S14C 1Y1WK 2B63K 2PMZL 3S17C 2Y0SL 4BBRK 4A3KK 1TWHC 4XLNA 1ZYRA 4BY1C 3GTQC 3S1MC 1TWAK 3S1RK 3GTGK 3PO3C 1TWHK 2WAQL 4A3IC 4BY1K 3HOVC 1WCMC 4LK0A 4YFNA 1TWCC 4C3IK 4A3IK 4C3JK 4A3JC 4XSXA 3HOVK 3M4OK 2R92K 4A3CK 1Y1VC 3M3YC 3HOYK 4BY7K 3PO2C 2JA6C 4BXXC 3S15C 1SFOC 4LK1A 4A3DC 4AYBD 1I6VA 3I4MC 3HOXK 3S15K 4MEXA 4YFKA 4Q4ZA 4C3HK 3H0GC 3FKIC 4LJZA 3EQLA 5C3EK 4A3EC 2NVYK 2JA5K 2YU9C 2E2HK 4A3MC 3RZOC 2NVXC 4KN7A 2R7ZK 3DXJA 1Y1WC 2B63C 2O5IA 2NVTK 4MQ9A 4BBRC 4A3KC 4MEYA 3S1RC 3GTGC 2NVXK 1I6HK 3S2HC 1TWAC 4A3LK 1YNNA 4OIQA 4A3BC 4Y7NK 3S2HK 4QJVA 4A3BK 4C3IC 2JA7C 1SMYA 2JA8C 4C3JC 3M4OC
chains in the Genus database with same CATH superfamily
3GTPK 2JA8K 2R92C 3GTJK 2BE5A 4BY7C 1VGXA 1TWGA 1I3QA 4C3HC 1IW7A 4LR2A 3GTOK 2E2JK 2NVYC 5E68A 4XLPA 2JA5C 5M3MK 2KQ1A 1AB4A 3S1NK 2NVTC 3HOUK 5FLMK 2GSOA 1DCOA 1DCPA 3K7AK 5IP7C 2FQOA 3G4AA 1EI6A 3HOZK 2V6SA 3GTPC 1O2BA 3GTJC 3AH5A 1F7VA 1O2FB 3N3YA 2ZJQS 1USOA 1TWCA 4OIPA 1YX2A 3GTOC 2E2JC 1WOOA 3JSTA 1ZXOA 3S1NC 5CJ9A 3QX3A 1WORA 3HOUC 5FLMC 4NOIA 1BGWA 3AQPA 4O2DA 1XXCA 3TFIA 2WAQD 4G0UA 3AD7C 5IYDK 3K7AC 3S17K 3GEHA 5IOSA 2NVXA 1Y1WA 3HOZC 1ZQ1C 4WCES 2WB1L 1C0AA 4A3GC 5M5XK 5HQHA 4A3JK 1TWFC 1I3QK 3M3YK 2JA6K 4BXXK 2R92A 4M1XA 1O24A 2GSUA 1K83C 3H0GK 4Q5SA 3MMLB 1XPPA 3Q3QA 2NVYA 2JA5A 3S17C 2Y0SL 3S1RK 4BY1C 1TWAK 1J6VA 2R93A 4A3IC 4LK0A 1J6WA 4DDQA 4A3JC 5CHPA 4A3CK 1XXAA 3M3YC 2JA6C 4BXXC 3GTPA 1INNA 4GFQA 1I6VA 3HOXK 2GSNA 3H0GC 4GTLA 5C3EK 1L0WA 1F7UA 3GTOA 2R7ZK 3DXJA 3S1RC 1WIHA 2NVXK 1TWAC 5HL7S 4OIQA 4A3LK 4A3BC 3S0XA 3OEPA 3OREA 4IOCS 3S2HK 1KQ4A 1SMYA 4KB2A 3GTMK 5C4JC 3LYWA 4A3CC 4P5AA 1DD5A 5EGHA 2L3UA 3HOXC 1ISEA 1O2AA 1TWFA 5C3EC 1B4BA 4AYBL 2V6TA 3GSIA 1VJEA 2R7ZC 4ILDA 4A3LC 1K83A 4QIWD 2R93K 5JVOA 3GTLC 5TJ3A 2XCOA 3AQOA 5L46A 2KPUA 4P9SA 2PHCB 3GTMC 5IP7K 3HKZD 2JH3A 3TFJA 2XCRB 4KB4A 1O25A 3TTGA 3HKZL 1PJ7A 1BDFA 4KMUA 1X31C 2VUMK 2JA6A 1HI9A 2P8TA 1XZQB 4YFXA 4A93C 4OIOA 4JK1A 1XZPA 4C45A 1R9TK 5JVHS 1WOPA 1G51A 3H0GA 3DLLS 3RZDC 2R93C 3S16K 4GTBA 4KDDA 2ZJRS 1O29A 1O26A 1B4AA 1O27A 1TWAA 1DCHA 4A3GK 1Y1VK 3ADAC 1TWFK 5IOTA 4Y52C 3NUHA 3V4GA 2VUMC 1IS1A 4KN4A 4WJ3M 1R9TC 5TMFA 3FKIK 1K83K 2ZUEA 3LPXA 4A3MK 3S16C 4RMFA 4BBRK 1TWHC 3GTGK 2R7ZA 3SZZA 4LQYA 3BUEA 2WAQL 4BY1K 3HOVC 4YFNA 4A3IK 4C3JK 3GTLA 1Y1VC 3HOYK 3GTMA 3S15C 4IOAS 3IPJA 2KWAA 3BP8C 4MEXA 4Q4ZA 4FM9A 3CAGA 4KM9A 3FKIC 4LJZA 3A8JA 4A3MC 4KC6A 3N0CA 4BBRC 3LAPA 1I6HK 3GTGC 4KMDA 1FEUA 1WQFA 3GIRA 4Y7NK 4QJVA 4A3BK 2JA7C 4C3JC 1JVIA 1EK8A 1V5VA 3A8IA 3HOYC 5IYCC 5C4JK 2CFAA 3H3VD 2RGRA 4BBSK 2PA8D 4KATA 5D4DA 1EQRA 3VA7A 2VUMA 5IYBC 4C2MK 4A3FK 1I6HC 4KM8A 1JOEA 2O5JA 4X6AC 4GTCA 1R9TA 5HL8A 2E2IK 4Y7NC 4YG2A 4U67S 3GTLK 4KMHA 1TWHA 1J98A 4GTEA 2D6FC 3S1QK 4BBSC 5M3FK 3FHZA 1RU0A 1VRQC 4QJVB 4XCHA 1Y1VA 4OINA 1I50K 5IP9K 3I4NC 5IOQA 3S2DK 2PMZD 4C2MC 2CFAB 4KAWX 3HOWK 4A3FC 2ZUFA 4A93K 4J3NA 3FKIA 2E2IC 2FQTA 4GZYA 3RZDK 2GAHC 3GTQK 1ZVUA 2A6EA 1WSRA 2A69A 4QIWL 3GTGA 3S1QC 4BLBA 1PJ6A 4LLGA 4IO9S 3HXAA 3SZYA 1O28A 2XCQA 5C44C 2V6UA 2JA7A 5TMCA 4WFBS 3PO2K 2EBBA 1SFOK 1I50C 5IP9C 3TFHA 4Y52K 3S2DC 3HOWC 2YU9K 4WFAS 3CF5S 3FOEA 2B63K 4A3KK 1EH1A 4WF9S 1ZYRA 3GTQC 1TWHK 4C3IK 1VH2A 3M4OK 4XSXA 3HOVK 3PO2C 1F9NA 1SFOC 3S15K 1WQGA 1PJ5A 4KARA 1EFWA 4GTFA 2YU9C 5JVGS 2E2HK 4KN7A 2B63C 2O5IA 4MQ9A 2RH6A 4A3KC 4MEYA 3G4CA 3T01A 1IQ0A 1YNNA 3T02A 3PIPS 1USMA 1WSVA 3AD8C 4C3IC 2E2IA 2JA8C 3M4OC 1XZPB 3BP3A 1JQWA 2JA7K 1WOSA 1WCMA 2NVQK 1YCLA 5IYCK 3GTKK 3WODA 1HQMA 4AH6A 4OIRA 1YNJA 4P5BA 2A68A 4G0VA 4WFNS 3CQZK 2E2HC 3AD9C 1I50A 4G7ZA 5IYBK 2P5MA 2WB1D 4LOWA 3A8KA 4KASA 4X6AK 2PPBA 3GEEA 3GTQA 1TWGK 2NVQC 2ZJPS 3GTKC 4BKWA 4G7OA 1BS2A 4PAAA 3H3VL 4ZH4A 1VLOA 2PA8L 3CQZC 1SFOA 2Y0SD 3I4NK 5IYDC 1ZBSA 5C4XK 3GDZA 3S14K 2GAGC 5M5WK 1IE0A 2YU9A 3T00A 3N0BA 3S1MK 4FZBA 2B63A 4G7HA 3PO3K 4GTDA 5DM7S 2ZFZA 1TWGC 1WCMK 1TWCK 1I3QC 5M5YK 3GTJA 5C44K 2CW0A 5FJ8K 1XXBA 3L4KA 3ERED 4A3DK 3I4MK 3PIOS 3L4JA 5JFEA 5EGEA 2W7VA 4XSZA 4A3EK 5C4XC 1BJTA 4WILA 2A6HA 3RZOK 4PABA 3S14C 4GT9A 1Y1WK 2PMZL 2E2HA 4XLNA 3S1MC 1GE9A 4GTAA 3PO3C 1WCMC 3OPFA 1TWCC 4WJ4A 1UV7A 1XZQA 2R92K 5IORA 4BY7K 3GEIA 3LAJA 3FOFA 4LK1A 4A3DC 4AYBD 4G0WA 3I4MC 5DM6S 4YFKA 1J6XA 3GTKA 4C3HK 3EQLA 4A3EC 2NVYK 2JA5K 1WQHA 3RZOC 2NVXC 1Y1WC 1F93A 2KXYA 2NVTK 3CQZA 2Y3PA 3S2HC 1IL2A 4BLAA 1IBAA 2L5NA 4KMAA
chains in the Genus database with same CATH topology
3GTMK 5C4JC 2JA7K 3GTPK 2JA8K 2R92C 4A3CC 3GTJK 2BE5A 3HOYC 5IYCC 4BY7C 5C4JK 2NVQK 3H3VD 4BBSK 5IYCK 3GTKK 3WODA 3HOXC 2PA8D 1HQMA 5D4DA 4C3HC 4OIRA 1IW7A 1YNJA 5C3EC 3GTOK 2E2JK 4AYBL 2A68A 2NVYC 4XLPA 2JA5C 5M3MK 3CQZK 2E2HC 3S1NK 5IYBC 2R7ZC 4G7ZA 2NVTC 4C2MK 3HOUK 4A3FK 1I6HC 5FLMK 5IYBK 2O5JA 4A3LC 4X6AC 4QIWD 2E2IK 2WB1D 2R93K 4Y7NC 3GTLC 3K7AK 5IP7C 4X6AK 4YG2A 3GTLK 5IP7K 3GTMC 3HOZK 2PPBA 3GTPC 3S1QK 3HKZD 3GTJC 1TWGK 2NVQC 4BBSC 3HKZL 5M3FK 3GTKC 4G7OA 4OIPA 4QJVB 1BDFA 4KMUA 3GTOC 2E2JC 4OINA 3H3VL 2VUMK 1I50K 4ZH4A 5IP9K 3I4NC 2PA8L 3CQZC 4YFXA 3S1NC 4A93C 3S2DK 4OIOA 4JK1A 2PMZD 2Y0SD 4C2MC 3HOUC 3HOWK 4A3FC 5IYDC 1R9TK 3I4NK 5FLMC 4NOIA 4A93K 5C4XK 3RZDC 2WAQD 2E2IC 2R93C 4GZYA 3S14K 3S16K 5IYDK 3K7AC 5M5WK 3S17K 3RZDK 3S1MK 3GTQK 3HOZC 2A6EA 4G7HA 2A69A 3PO3K 4QIWL 3S1QC 2WB1L 1TWGC 1WCMK 4LLGA 1TWCK 4A3GC 5M5XK 1I3QC 4A3JK 5C44C 5M5YK 1TWFC 4A3GK 1I3QK 1Y1VK 5C44K 2CW0A 5TMCA 5FJ8K 3PO2K 1TWFK 2JA6K 3M3YK 4BXXK 4Y52C 1SFOK 4A3DK 3I4MK 2VUMC 1I50C 5IP9C 4KN4A 4Y52K 3S2DC 1K83C 4XSZA 4Q5SA 3HOWC 1R9TC 5TMFA 3FKIK 3H0GK 4A3EK 1K83K 5C4XC 1XPPA 2YU9K 2A6HA 4A3MK 3S16C 3RZOK 3S14C 1Y1WK 2B63K 2PMZL 3S17C 2Y0SL 4BBRK 4A3KK 1TWHC 4XLNA 1ZYRA 4BY1C 3GTQC 3S1MC 1TWAK 3S1RK 3GTGK 3PO3C 1TWHK 2WAQL 4A3IC 4BY1K 3HOVC 1WCMC 4LK0A 4YFNA 1TWCC 4C3IK 4A3IK 4C3JK 4A3JC 4XSXA 3HOVK 3M4OK 2R92K 4A3CK 1Y1VC 3M3YC 3HOYK 4BY7K 3PO2C 2JA6C 4BXXC 3S15C 1SFOC 4LK1A 4A3DC 4AYBD 1I6VA 3I4MC 3HOXK 3S15K 4MEXA 4YFKA 4Q4ZA 4C3HK 3H0GC 3FKIC 4LJZA 3EQLA 5C3EK 4A3EC 2NVYK 2JA5K 2YU9C 2E2HK 4A3MC 3RZOC 2NVXC 4KN7A 2R7ZK 3DXJA 1Y1WC 2B63C 2O5IA 2NVTK 4MQ9A 4BBRC 4A3KC 4MEYA 3S1RC 3GTGC 2NVXK 1I6HK 3S2HC 1TWAC 4A3LK 1YNNA 4OIQA 4A3BC 4Y7NK 3S2HK 4QJVA 4A3BK 4C3IC 2JA7C 1SMYA 2JA8C 4C3JC 3M4OC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTM K;  5C4J C;  2JA7 K;  3GTP K;  2JA8 K;  2R92 C;  4A3C C;  3GTJ K;  2BE5 A;  3HOY C;  5IYC C;  4BY7 C;  5C4J K;  2NVQ K;  3H3V D;  4BBS K;  5IYC K;  3GTK K;  3WOD A;  3HOX C;  2PA8 D;  1HQM A;  5D4D A;  4C3H C;  4OIR A;  1IW7 A;  1YNJ A;  5C3E C;  3GTO K;  2E2J K;  4AYB L;  2A68 A;  2NVY C;  4XLP A;  2JA5 C;  5M3M K;  3CQZ K;  2E2H C;  3S1N K;  5IYB C;  2R7Z C;  4G7Z A;  2NVT C;  4C2M K;  3HOU K;  4A3F K;  1I6H C;  5FLM K;  5IYB K;  2O5J A;  4A3L C;  4X6A C;  4QIW D;  2E2I K;  2WB1 D;  2R93 K;  4Y7N C;  3GTL C;  3K7A K;  5IP7 C;  4X6A K;  4YG2 A;  3GTL K;  5IP7 K;  3GTM C;  3HOZ K;  2PPB A;  3GTP C;  3S1Q K;  3HKZ D;  3GTJ C;  1TWG K;  2NVQ C;  4BBS C;  3HKZ L;  5M3F K;  3GTK C;  4G7O A;  4OIP A;  4QJV B;  1BDF A;  4KMU A;  3GTO C;  2E2J C;  4OIN A;  3H3V L;  2VUM K;  1I50 K;  4ZH4 A;  5IP9 K;  3I4N C;  2PA8 L;  3CQZ C;  4YFX A;  3S1N C;  4A93 C;  3S2D K;  4OIO A;  4JK1 A;  2PMZ D;  2Y0S D;  4C2M C;  3HOU C;  3HOW K;  4A3F C;  5IYD C;  1R9T K;  3I4N K;  5FLM C;  4NOI A;  4A93 K;  5C4X K;  3RZD C;  2WAQ D;  2E2I C;  2R93 C;  4GZY A;  3S14 K;  3S16 K;  5IYD K;  3K7A C;  5M5W K;  3S17 K;  3RZD K;  3S1M K;  3GTQ K;  3HOZ C;  2A6E A;  4G7H A;  2A69 A;  3PO3 K;  4QIW L;  3S1Q C;  2WB1 L;  1TWG C;  1WCM K;  4LLG A;  1TWC K;  4A3G C;  5M5X K;  1I3Q C;  4A3J K;  5C44 C;  5M5Y K;  1TWF C;  4A3G K;  1I3Q K;  1Y1V K;  5C44 K;  2CW0 A;  5TMC A;  5FJ8 K;  3PO2 K;  1TWF K;  2JA6 K;  3M3Y K;  4BXX K;  4Y52 C;  1SFO K;  4A3D K;  3I4M K;  2VUM C;  1I50 C;  5IP9 C;  4KN4 A;  4Y52 K;  3S2D C;  1K83 C;  4XSZ A;  4Q5S A;  3HOW C;  1R9T C;  5TMF A;  3FKI K;  3H0G K;  4A3E K;  1K83 K;  5C4X C;  1XPP A;  2YU9 K;  2A6H A;  4A3M K;  3S16 C;  3RZO K;  3S14 C;  1Y1W K;  2B63 K;  2PMZ L;  3S17 C;  2Y0S L;  4BBR K;  4A3K K;  1TWH C;  4XLN A;  1ZYR A;  4BY1 C;  3GTQ C;  3S1M C;  1TWA K;  3S1R K;  3GTG K;  3PO3 C;  1TWH K;  2WAQ L;  4A3I C;  4BY1 K;  3HOV C;  1WCM C;  4LK0 A;  4YFN A;  1TWC C;  4C3I K;  4A3I K;  4C3J K;  4A3J C;  4XSX A;  3HOV K;  3M4O K;  2R92 K;  4A3C K;  1Y1V C;  3M3Y C;  3HOY K;  4BY7 K;  3PO2 C;  2JA6 C;  4BXX C;  3S15 C;  1SFO C;  4LK1 A;  4A3D C;  4AYB D;  1I6V A;  3I4M C;  3HOX K;  3S15 K;  4MEX A;  4YFK A;  4Q4Z A;  4C3H K;  3H0G C;  3FKI C;  4LJZ A;  3EQL A;  5C3E K;  4A3E C;  2NVY K;  2JA5 K;  2YU9 C;  2E2H K;  4A3M C;  3RZO C;  2NVX C;  4KN7 A;  2R7Z K;  3DXJ A;  1Y1W C;  2B63 C;  2O5I A;  2NVT K;  4MQ9 A;  4BBR C;  4A3K C;  4MEY A;  3S1R C;  3GTG C;  2NVX K;  1I6H K;  3S2H C;  1TWA C;  4A3L K;  1YNN A;  4OIQ A;  4A3B C;  4Y7N K;  3S2H K;  4QJV A;  4A3B K;  4C3I C;  2JA7 C;  1SMY A;  2JA8 C;  4C3J C;  3M4O C; 
#chains in the Genus database with same CATH topology
 3GTP K;  2JA8 K;  2R92 C;  3GTJ K;  2BE5 A;  4BY7 C;  1VGX A;  1TWG A;  1I3Q A;  4C3H C;  1IW7 A;  4LR2 A;  3GTO K;  2E2J K;  2NVY C;  5E68 A;  4XLP A;  2JA5 C;  5M3M K;  2KQ1 A;  1AB4 A;  3S1N K;  2NVT C;  3HOU K;  5FLM K;  2GSO A;  1DCO A;  1DCP A;  3K7A K;  5IP7 C;  2FQO A;  3G4A A;  1EI6 A;  3HOZ K;  2V6S A;  3GTP C;  1O2B A;  3GTJ C;  3AH5 A;  1F7V A;  1O2F B;  3N3Y A;  2ZJQ S;  1USO A;  1TWC A;  4OIP A;  1YX2 A;  3GTO C;  2E2J C;  1WOO A;  3JST A;  1ZXO A;  3S1N C;  5CJ9 A;  3QX3 A;  1WOR A;  3HOU C;  5FLM C;  4NOI A;  1BGW A;  3AQP A;  4O2D A;  1XXC A;  3TFI A;  2WAQ D;  4G0U A;  3AD7 C;  5IYD K;  3K7A C;  3S17 K;  3GEH A;  5IOS A;  2NVX A;  1Y1W A;  3HOZ C;  1ZQ1 C;  4WCE S;  2WB1 L;  1C0A A;  4A3G C;  5M5X K;  5HQH A;  4A3J K;  1TWF C;  1I3Q K;  3M3Y K;  2JA6 K;  4BXX K;  2R92 A;  4M1X A;  1O24 A;  2GSU A;  1K83 C;  3H0G K;  4Q5S A;  3MML B;  1XPP A;  3Q3Q A;  2NVY A;  2JA5 A;  3S17 C;  2Y0S L;  3S1R K;  4BY1 C;  1TWA K;  1J6V A;  2R93 A;  4A3I C;  4LK0 A;  1J6W A;  4DDQ A;  4A3J C;  5CHP A;  4A3C K;  1XXA A;  3M3Y C;  2JA6 C;  4BXX C;  3GTP A;  1INN A;  4GFQ A;  1I6V A;  3HOX K;  2GSN A;  3H0G C;  4GTL A;  5C3E K;  1L0W A;  1F7U A;  3GTO A;  2R7Z K;  3DXJ A;  3S1R C;  1WIH A;  2NVX K;  1TWA C;  5HL7 S;  4OIQ A;  4A3L K;  4A3B C;  3S0X A;  3OEP A;  3ORE A;  4IOC S;  3S2H K;  1KQ4 A;  1SMY A;  4KB2 A;  3GTM K;  5C4J C;  3LYW A;  4A3C C;  4P5A A;  1DD5 A;  5EGH A;  2L3U A;  3HOX C;  1ISE A;  1O2A A;  1TWF A;  5C3E C;  1B4B A;  4AYB L;  2V6T A;  3GSI A;  1VJE A;  2R7Z C;  4ILD A;  4A3L C;  1K83 A;  4QIW D;  2R93 K;  5JVO A;  3GTL C;  5TJ3 A;  2XCO A;  3AQO A;  5L46 A;  2KPU A;  4P9S A;  2PHC B;  3GTM C;  5IP7 K;  3HKZ D;  2JH3 A;  3TFJ A;  2XCR B;  4KB4 A;  1O25 A;  3TTG A;  3HKZ L;  1PJ7 A;  1BDF A;  4KMU A;  1X31 C;  2VUM K;  2JA6 A;  1HI9 A;  2P8T A;  1XZQ B;  4YFX A;  4A93 C;  4OIO A;  4JK1 A;  1XZP A;  4C45 A;  1R9T K;  5JVH S;  1WOP A;  1G51 A;  3H0G A;  3DLL S;  3RZD C;  2R93 C;  3S16 K;  4GTB A;  4KDD A;  2ZJR S;  1O29 A;  1O26 A;  1B4A A;  1O27 A;  1TWA A;  1DCH A;  4A3G K;  1Y1V K;  3ADA C;  1TWF K;  5IOT A;  4Y52 C;  3NUH A;  3V4G A;  2VUM C;  1IS1 A;  4KN4 A;  4WJ3 M;  1R9T C;  5TMF A;  3FKI K;  1K83 K;  2ZUE A;  3LPX A;  4A3M K;  3S16 C;  4RMF A;  4BBR K;  1TWH C;  3GTG K;  2R7Z A;  3SZZ A;  4LQY A;  3BUE A;  2WAQ L;  4BY1 K;  3HOV C;  4YFN A;  4A3I K;  4C3J K;  3GTL A;  1Y1V C;  3HOY K;  3GTM A;  3S15 C;  4IOA S;  3IPJ A;  2KWA A;  3BP8 C;  4MEX A;  4Q4Z A;  4FM9 A;  3CAG A;  4KM9 A;  3FKI C;  4LJZ A;  3A8J A;  4A3M C;  4KC6 A;  3N0C A;  4BBR C;  3LAP A;  1I6H K;  3GTG C;  4KMD A;  1FEU A;  1WQF A;  3GIR A;  4Y7N K;  4QJV A;  4A3B K;  2JA7 C;  4C3J C;  1JVI A;  1EK8 A;  1V5V A;  3A8I A;  3HOY C;  5IYC C;  5C4J K;  2CFA A;  3H3V D;  2RGR A;  4BBS K;  2PA8 D;  4KAT A;  5D4D A;  1EQR A;  3VA7 A;  2VUM A;  5IYB C;  4C2M K;  4A3F K;  1I6H C;  4KM8 A;  1JOE A;  2O5J A;  4X6A C;  4GTC A;  1R9T A;  5HL8 A;  2E2I K;  4Y7N C;  4YG2 A;  4U67 S;  3GTL K;  4KMH A;  1TWH A;  1J98 A;  4GTE A;  2D6F C;  3S1Q K;  4BBS C;  5M3F K;  3FHZ A;  1RU0 A;  1VRQ C;  4QJV B;  4XCH A;  1Y1V A;  4OIN A;  1I50 K;  5IP9 K;  3I4N C;  5IOQ A;  3S2D K;  2PMZ D;  4C2M C;  2CFA B;  4KAW X;  3HOW K;  4A3F C;  2ZUF A;  4A93 K;  4J3N A;  3FKI A;  2E2I C;  2FQT A;  4GZY A;  3RZD K;  2GAH C;  3GTQ K;  1ZVU A;  2A6E A;  1WSR A;  2A69 A;  4QIW L;  3GTG A;  3S1Q C;  4BLB A;  1PJ6 A;  4LLG A;  4IO9 S;  3HXA A;  3SZY A;  1O28 A;  2XCQ A;  5C44 C;  2V6U A;  2JA7 A;  5TMC A;  4WFB S;  3PO2 K;  2EBB A;  1SFO K;  1I50 C;  5IP9 C;  3TFH A;  4Y52 K;  3S2D C;  3HOW C;  2YU9 K;  4WFA S;  3CF5 S;  3FOE A;  2B63 K;  4A3K K;  1EH1 A;  4WF9 S;  1ZYR A;  3GTQ C;  1TWH K;  4C3I K;  1VH2 A;  3M4O K;  4XSX A;  3HOV K;  3PO2 C;  1F9N A;  1SFO C;  3S15 K;  1WQG A;  1PJ5 A;  4KAR A;  1EFW A;  4GTF A;  2YU9 C;  5JVG S;  2E2H K;  4KN7 A;  2B63 C;  2O5I A;  4MQ9 A;  2RH6 A;  4A3K C;  4MEY A;  3G4C A;  3T01 A;  1IQ0 A;  1YNN A;  3T02 A;  3PIP S;  1USM A;  1WSV A;  3AD8 C;  4C3I C;  2E2I A;  2JA8 C;  3M4O C;  1XZP B;  3BP3 A;  1JQW A;  2JA7 K;  1WOS A;  1WCM A;  2NVQ K;  1YCL A;  5IYC K;  3GTK K;  3WOD A;  1HQM A;  4AH6 A;  4OIR A;  1YNJ A;  4P5B A;  2A68 A;  4G0V A;  4WFN S;  3CQZ K;  2E2H C;  3AD9 C;  1I50 A;  4G7Z A;  5IYB K;  2P5M A;  2WB1 D;  4LOW A;  3A8K A;  4KAS A;  4X6A K;  2PPB A;  3GEE A;  3GTQ A;  1TWG K;  2NVQ C;  2ZJP S;  3GTK C;  4BKW A;  4G7O A;  1BS2 A;  4PAA A;  3H3V L;  4ZH4 A;  1VLO A;  2PA8 L;  3CQZ C;  1SFO A;  2Y0S D;  3I4N K;  5IYD C;  1ZBS A;  5C4X K;  3GDZ A;  3S14 K;  2GAG C;  5M5W K;  1IE0 A;  2YU9 A;  3T00 A;  3N0B A;  3S1M K;  4FZB A;  2B63 A;  4G7H A;  3PO3 K;  4GTD A;  5DM7 S;  2ZFZ A;  1TWG C;  1WCM K;  1TWC K;  1I3Q C;  5M5Y K;  3GTJ A;  5C44 K;  2CW0 A;  5FJ8 K;  1XXB A;  3L4K A;  3ERE D;  4A3D K;  3I4M K;  3PIO S;  3L4J A;  5JFE A;  5EGE A;  2W7V A;  4XSZ A;  4A3E K;  5C4X C;  1BJT A;  4WIL A;  2A6H A;  3RZO K;  4PAB A;  3S14 C;  4GT9 A;  1Y1W K;  2PMZ L;  2E2H A;  4XLN A;  3S1M C;  1GE9 A;  4GTA A;  3PO3 C;  1WCM C;  3OPF A;  1TWC C;  4WJ4 A;  1UV7 A;  1XZQ A;  2R92 K;  5IOR A;  4BY7 K;  3GEI A;  3LAJ A;  3FOF A;  4LK1 A;  4A3D C;  4AYB D;  4G0W A;  3I4M C;  5DM6 S;  4YFK A;  1J6X A;  3GTK A;  4C3H K;  3EQL A;  4A3E C;  2NVY K;  2JA5 K;  1WQH A;  3RZO C;  2NVX C;  1Y1W C;  1F93 A;  2KXY A;  2NVT K;  3CQZ A;  2Y3P A;  3S2H C;  1IL2 A;  4BLA A;  1IBA A;  2L5N A;  4KMA A; 
#chains in the Genus database with same CATH homology
 3GTM K;  5C4J C;  2JA7 K;  3GTP K;  2JA8 K;  2R92 C;  4A3C C;  3GTJ K;  2BE5 A;  3HOY C;  5IYC C;  4BY7 C;  5C4J K;  2NVQ K;  3H3V D;  4BBS K;  5IYC K;  3GTK K;  3WOD A;  3HOX C;  2PA8 D;  1HQM A;  5D4D A;  4C3H C;  4OIR A;  1IW7 A;  1YNJ A;  5C3E C;  3GTO K;  2E2J K;  4AYB L;  2A68 A;  2NVY C;  4XLP A;  2JA5 C;  5M3M K;  3CQZ K;  2E2H C;  3S1N K;  5IYB C;  2R7Z C;  4G7Z A;  2NVT C;  4C2M K;  3HOU K;  4A3F K;  1I6H C;  5FLM K;  5IYB K;  2O5J A;  4A3L C;  4X6A C;  4QIW D;  2E2I K;  2WB1 D;  2R93 K;  4Y7N C;  3GTL C;  3K7A K;  5IP7 C;  4X6A K;  4YG2 A;  3GTL K;  5IP7 K;  3GTM C;  3HOZ K;  2PPB A;  3GTP C;  3S1Q K;  3HKZ D;  3GTJ C;  1TWG K;  2NVQ C;  4BBS C;  3HKZ L;  5M3F K;  3GTK C;  4G7O A;  4OIP A;  4QJV B;  1BDF A;  4KMU A;  3GTO C;  2E2J C;  4OIN A;  3H3V L;  2VUM K;  1I50 K;  4ZH4 A;  5IP9 K;  3I4N C;  2PA8 L;  3CQZ C;  4YFX A;  3S1N C;  4A93 C;  3S2D K;  4OIO A;  4JK1 A;  2PMZ D;  2Y0S D;  4C2M C;  3HOU C;  3HOW K;  4A3F C;  5IYD C;  1R9T K;  3I4N K;  5FLM C;  4NOI A;  4A93 K;  5C4X K;  3RZD C;  2WAQ D;  2E2I C;  2R93 C;  4GZY A;  3S14 K;  3S16 K;  5IYD K;  3K7A C;  5M5W K;  3S17 K;  3RZD K;  3S1M K;  3GTQ K;  3HOZ C;  2A6E A;  4G7H A;  2A69 A;  3PO3 K;  4QIW L;  3S1Q C;  2WB1 L;  1TWG C;  1WCM K;  4LLG A;  1TWC K;  4A3G C;  5M5X K;  1I3Q C;  4A3J K;  5C44 C;  5M5Y K;  1TWF C;  4A3G K;  1I3Q K;  1Y1V K;  5C44 K;  2CW0 A;  5TMC A;  5FJ8 K;  3PO2 K;  1TWF K;  2JA6 K;  3M3Y K;  4BXX K;  4Y52 C;  1SFO K;  4A3D K;  3I4M K;  2VUM C;  1I50 C;  5IP9 C;  4KN4 A;  4Y52 K;  3S2D C;  1K83 C;  4XSZ A;  4Q5S A;  3HOW C;  1R9T C;  5TMF A;  3FKI K;  3H0G K;  4A3E K;  1K83 K;  5C4X C;  1XPP A;  2YU9 K;  2A6H A;  4A3M K;  3S16 C;  3RZO K;  3S14 C;  1Y1W K;  2B63 K;  2PMZ L;  3S17 C;  2Y0S L;  4BBR K;  4A3K K;  1TWH C;  4XLN A;  1ZYR A;  4BY1 C;  3GTQ C;  3S1M C;  1TWA K;  3S1R K;  3GTG K;  3PO3 C;  1TWH K;  2WAQ L;  4A3I C;  4BY1 K;  3HOV C;  1WCM C;  4LK0 A;  4YFN A;  1TWC C;  4C3I K;  4A3I K;  4C3J K;  4A3J C;  4XSX A;  3HOV K;  3M4O K;  2R92 K;  4A3C K;  1Y1V C;  3M3Y C;  3HOY K;  4BY7 K;  3PO2 C;  2JA6 C;  4BXX C;  3S15 C;  1SFO C;  4LK1 A;  4A3D C;  4AYB D;  1I6V A;  3I4M C;  3HOX K;  3S15 K;  4MEX A;  4YFK A;  4Q4Z A;  4C3H K;  3H0G C;  3FKI C;  4LJZ A;  3EQL A;  5C3E K;  4A3E C;  2NVY K;  2JA5 K;  2YU9 C;  2E2H K;  4A3M C;  3RZO C;  2NVX C;  4KN7 A;  2R7Z K;  3DXJ A;  1Y1W C;  2B63 C;  2O5I A;  2NVT K;  4MQ9 A;  4BBR C;  4A3K C;  4MEY A;  3S1R C;  3GTG C;  2NVX K;  1I6H K;  3S2H C;  1TWA C;  4A3L K;  1YNN A;  4OIQ A;  4A3B C;  4Y7N K;  3S2H K;  4QJV A;  4A3B K;  4C3I C;  2JA7 C;  1SMY A;  2JA8 C;  4C3J C;  3M4O C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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