4A3CC

Rna polymerase ii initial transcribing complex with a 5nt dna-rna hybrid
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 62
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3cC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3cC01
3H3VL 3WODA 5IYCC 2JA5C 4AYBL 2A6EA 4A3EK 1TWGK 3S1NK 3PO3C 4Y7NK 3M4OK 4OIRA 4NOIA 4LK1A 4G7HA 1SFOC 3HOUC 2NVTC 4C3HC 4BBRK 3GTKC 1I3QK 4BY1K 4LLGA 4OIOA 3GTLK 4A3MK 2E2IK 5TMFA 3GTGK 1I6VA 2JA7C 3GTOK 2PMZL 4Y52K 1SMYA 1I50K 1K83K 4OIPA 4A3JC 3FKIC 4YFXA 4A3KC 2B63C 3S16C 4BXXK 5IYDK 2O5IA 5C3EC 3PO2C 1R9TK 2NVQK 4A3BK 3GTPC 3S17K 3RZDC 3HOYC 3I4MK 3S2DK 2YU9K 1BDFA 4LK0A 3HOXC 3S1QC 2JA6C 4A3GC 2NVYK 3H0GK 2VUMK 1Y1WC 4G7ZA 3S2HK 2NVXK 5C4JC 3K7AC 4C3JC 3M3YK 4OINA 2A69A 1TWCK 2PA8D 4QIWD 4A3IC 3S14C 5C4XC 2E2HK 5M5WK 4Q4ZA 3S1MK 2WAQL 4XLPA 5IYBC 3GTMK 4MQ9A 4OIQA 2Y0SD 2R7ZK 3S1NC 4GZYA 2R92K 4Y7NC 3M4OC 2O5JA 5M5XK 2WB1L 1TWFK 4C2MK 1WCMC 3GTLC 3GTQK 1I3QC 4KN7A 5IP9K 4A3MC 2E2IC 3GTGC 5FLMK 4BBSK 2PPBA 3GTOC 4A93K 1TWAK 4C3IK 3S15K 1I50C 1K83C 1YNNA 3PO3K 4YG2A 5IYDC 1R9TC 4A3FK 2PMZD 2NVQC 5FJ8K 2JA8K 3S2DC 3S1RK 5D4DA 3HOZK 4BY7C 2YU9C 1Y1VK 3H0GC 2A68A 4MEXA 2NVYC 4XLNA 2VUMC 4A3DK 2BE5A 5IP7K 2NVXC 4A3CK 3GTJK 3M3YC 4A3JK 3S16K 1XPPA 1TWCC 4G7OA 5C44C 3HKZD 2A6HA 3CQZK 5M3MK 3HOYK 3S1MC 4A3LK 1TWHK 3I4NK 4A3EC 3S1QK 1TWGC 3HOVK 4MEYA 3H3VD 2R93K 4KN4A 4YFNA 2PA8L 1Y1WK 1I6HK 3GTMC 4AYBD 4BY1C 3K7AK 4BBRC 2E2JK 3HOWK 4QJVB 4LJZA 3RZOK 4X6AK 2CW0A 1TWFC 4C2MC 5M5YK 5IYCK 4Y52C 3GTQC 2JA5K 4BXXC 4JK1A 5IP9C 2Y0SL 5FLMC 2WB1D 3DXJA 4A3BC 3S17C 4A93C 1TWAC 1SFOK 4C3IC 3I4MC 3S15C 4C3HK 4QJVA 4XSXA 2NVTK 3GTKK 3HOUK 1YNJA 1HQMA 4A3FC 2JA7K 3EQLA 2JA8C 3S2HC 1WCMK 3HOZC 3S1RC 5IYBK 5M3FK 2B63K 3FKIK 1Y1VC 4A3DC 4A3KK 4Q5SA 5C3EK 3PO2K 5IP7C 3GTPK 3RZDK 2E2HC 4A3CC 3GTJC 3HOXK 4YFKA 2JA6K 4A3GK 3CQZC 4QIWL 1IW7A 2WAQD 4ZH4A 5C4JK 4A3LC 1TWHC 4C3JK 4BY7K 3I4NC 2R7ZC 2R92C 3HOVC 4A3IK 2R93C 1ZYRA 1I6HC 3S14K 5C4XK 4XSZA 4KMUA 3HKZL 2E2JC 3HOWC 5TMCA 4BBSC 3RZOC 4X6AC 5C44K
chains in the Genus database with same CATH superfamily
3H3VL 2KWAA 2PHCB 4WF9S 3PO3C 4OIRA 2NVTC 4C3HC 4GTCA 1O27A 4BBRK 2JA7C 1I50K 4RMFA 3S16C 3GEHA 2O5IA 3ERED 1XXAA 2YU9K 2V6SA 1BGWA 3A8IA 2NVXK 4OINA 5JVGS 4A3IC 4QIWD 3S14C 1EFWA 2WAQL 1K83A 4XLPA 1ZXOA 4BLAA 3S1NC 2R92K 5M5XK 1TWFK 4C2MK 1WCMC 2RH6A 3GTLC 4KN7A 4A3MC 4BBSK 5FLMK 4C3IK 3S15K 1K83C 1YNNA 5IOTA 4KAWX 2PMZD 2NVQC 1DCPA 2JA8K 1TWHA 1J6WA 2A68A 2R7ZA 2NVYC 5DM6S 1F9NA 5IP7K 3AH5A 2Y3PA 4A3JK 3GTQA 3HKZD 3S1MC 4A3LK 2R93K 1Y1WK 4AYBD 2E2JK 4BBRC 1Y1VA 4QJVB 4X6AK 4KB2A 1EQRA 4XCHA 3PIOS 3GTQC 1WIHA 5IP9C 3FOEA 5HL7S 2NVTK 4C3HK 4QJVA 4XSXA 2JA6A 3TFJA 3LAPA 2JA7K 3HOZC 3S1RC 4ILDA 5M3FK 1Y1VC 4GTLA 1USOA 3CAGA 4KB4A 4KC6A 4A3CC 5IORA 2JH3A 1G51A 2R92C 1J6XA 3OEPA 4A3IK 1VGXA 3S14K 3MMLB 4G0UA 1L0WA 4XSZA 3HKZL 4GTBA 3TTGA 5HQHA 3L4JA 4BBSC 1J98A 4GTDA 5C44K 3WODA 3GTPA 5IYCC 3GSIA 2KPUA 4AYBL 4A3EK 3FOFA 3S1NK 2GSOA 1IL2A 4NOIA 3Q3QA 3GIRA 4LK1A 4WJ3M 3HOUC 3GTLK 3VA7A 5JVHS 2L5NA 4LLGA 4OIOA 4A3MK 3S0XA 2XCRB 4Y52K 1K83K 4A3JC 4YFXA 1X31C 3LPXA 4BXXK 1TWCA 4A3BK 2NVQK 3GTPC 3AQOA 3RZDC 5DM7S 3I4MK 1WSVA 1BDFA 4LK0A 3HOXC 2NVYK 1TWGA 1Y1WC 3ADAC 4C3JC 1WORA 2A69A 2PA8D 3GTGA 5C4XC 3BP8C 3S1MK 4Q4ZA 2CFAA 4KARA 2V6TA 4FM9A 2Y0SD 1O29A 2R7ZK 3H0GA 2ZUFA 4Y7NC 2WB1L 4KASA 3GTQK 2ZJPS 1V5VA 5IP9K 3GTGC 2PPBA 1KQ4A 1WOPA 2V6UA 3V4GA 4BLBA 3S2DC 3S1RK 3HOZK 1Y1VK 1O2AA 3H0GC 4XLNA 4IO9S 4A3CK 1VH2A 1IQ0A 5C44C 1WQGA 1PJ5A 3HOYK 3A8KA 4A3EC 4KN4A 2KQ1A 2PA8L 5JFEA 3CF5S 2ZUEA 1VLOA 4LJZA 1EI6A 1F93A 1F7VA 5IYCK 4Y52C 3SZZA 4BXXC 4JK1A 2Y0SL 5EGHA 4A3BC 4A93C 3I4MC 3HOUK 4P5AA 3LAJA 2KXYA 4A3FC 3EQLA 1UV7A 1DCOA 4A3DC 1O28A 4Q5SA 3GTPK 3RZDK 4FZBA 3HOXK 1BJTA 4WCES 4QIWL 1INNA 1SFOA 1TWHC 4C3JK 4BY7K 2R7ZC 1XZPB 3HOVC 2RGRA 1ZYRA 1I6HC 5C4XK 4KMUA 3FKIA 5HL8A 3RZOC 2XCOA 1I50A 4WFAS 1XZPA 4DDQA 1TWGK 3GDZA 4Y7NK 4PABA 2D6FC 1XXBA 1SFOC 4WJ4A 5TMFA 3GTGK 4KM8A 1I6VA 4GFQA 2PMZL 1SMYA 4OIPA 3FKIC 4A3KC 1BS2A 5C3EC 3PO2C 1JOEA 3S17K 3HOYC 3S2DK 4WFBS 3LYWA 3H0GK 2JA6C 4A3GC 1ZVUA 3GEEA 1J6VA 5C4JC 1I3QA 4WFNS 2E2IA 3GTOA 1O24A 1TWFA 4KM9A 1R9TA 5JVOA 4OIQA 4LR2A 3FHZA 5E68A 4GZYA 2O5JA 3M4OC 1WSRA 2VUMA 1O2BA 2P5MA 4M1XA 1I3QC 4G0VA 2E2IC 3GTOC 1VJEA 3HXAA 4G0WA 4A93K 2E2HA 1IS1A 4YG2A 5IYDC 1R9TC 4KATA 2CFAB 4A3FK 5FJ8K 3GTMA 4BY7C 3DLLS 4A3DK 2VUMC 1JVIA 3OPFA 3M3YC 3N0BA 2P8TA 1TWCC 3G4CA 2A6HA 5M3MK 1TWAA 1TWHK 3S1QK 1TWGC 3HOVK 4MEYA 1ZQ1C 4YFNA 1DCHA 3G4AA 1I6HK 3GTMC 4WILA 3K7AK 1VRQC 5CHPA 3RZOK 3T01A 2CW0A 5M5YK 4LOWA 3GTJA 3AQPA 1WQFA 3JSTA 3DXJA 3S17C 1JQWA 3CQZA 1TWAC 4GTAA 4O2DA 3N0CA 1SFOK 1YNJA 1HQMA 1WOOA 1WQHA 3T02A 3FKIK 3L4KA 4A3KK 3GEIA 5C3EK 3PO2K 3GTJC 2JA5A 4IOCS 3AD9C 2JA6K 4A3GK 3CQZC 5EGEA 2GSUA 5IOSA 1IW7A 5C4JK 4ZH4A 1HI9A 3GTKA 3I4NC 2L3UA 4U67S 1WCMA 3GTLA 3HOWC 3BUEA 2B63A 4P5BA 1ZBSA 4LQYA 1EK8A 2JA5C 3N3YA 4GT9A 2A6EA 3M4OK 4G7HA 4BY1K 3GTKC 1I3QK 4KMHA 2E2IK 2NVYA 3GTOK 1RU0A 3AD7C 4GTEA 2B63C 5IYDK 1R9TK 1FEUA 4BKWA 3QX3A 3S1QC 2VUMK 1WOSA 2FQTA 3AD8C 4G7ZA 3TFHA 3S2HK 3K7AC 3M3YK 1TWCK 2ZFZA 4AH6A 2GSNA 2E2HK 1IE0A 5M5WK 5IYBC 1XZQB 1B4AA 3PIPS 3GTMK 4MQ9A 3OREA 4KDDA 3T00A 2YU9A 1DD5A 1F7UA 3BP3A 2GAGC 2NVXA 1XZQA 2W7VA 1EH1A 1TWAK 1I50C 1GE9A 1PJ7A 4P9SA 2GAHC 5IOQA 1B4BA 3PO3K 5TJ3A 5L46A 4IOAS 1ISEA 1AB4A 5D4DA 2YU9C 4MEXA 2ZJRS 2R92A 2BE5A 2NVXC 2FQOA 3GTJK 3S16K 1XPPA 3A8JA 4G7OA 4GTFA 3CQZK 3TFIA 1USMA 1O26A 1YCLA 3I4NK 2ZJQS 3H3VD 4PAAA 5CJ9A 3IPJA 4BY1C 3HOWK 2EBBA 1IBAA 1O25A 1TWFC 4C2MC 1C0AA 2JA5K 5FLMC 2WB1D 4C45A 4C3IC 3S15C 1YX2A 3GTKK 3SZYA 2R93A 2XCQA 1Y1WA 2JA8C 3S2HC 1WCMK 4KMAA 1O2FB 2B63K 1PJ6A 5IP7C 1XXCA 2E2HC 4YFKA 2WAQD 4A3LC 2R93C 2JA7A 3NUHA 2E2JC 4KMDA 4J3NA 5TMCA 5IYBK 4X6AC
chains in the Genus database with same CATH topology
3H3VL 3WODA 5IYCC 2JA5C 4AYBL 2A6EA 4A3EK 1TWGK 3S1NK 3PO3C 4Y7NK 3M4OK 4OIRA 4NOIA 4LK1A 4G7HA 1SFOC 3HOUC 2NVTC 4C3HC 4BBRK 3GTKC 1I3QK 4BY1K 4LLGA 4OIOA 3GTLK 4A3MK 2E2IK 5TMFA 3GTGK 1I6VA 2JA7C 3GTOK 2PMZL 4Y52K 1SMYA 1I50K 1K83K 4OIPA 4A3JC 3FKIC 4YFXA 4A3KC 2B63C 3S16C 4BXXK 5IYDK 2O5IA 5C3EC 3PO2C 1R9TK 2NVQK 4A3BK 3GTPC 3S17K 3RZDC 3HOYC 3I4MK 3S2DK 2YU9K 1BDFA 4LK0A 3HOXC 3S1QC 2JA6C 4A3GC 2NVYK 3H0GK 2VUMK 1Y1WC 4G7ZA 3S2HK 2NVXK 5C4JC 3K7AC 4C3JC 3M3YK 4OINA 2A69A 1TWCK 2PA8D 4QIWD 4A3IC 3S14C 5C4XC 2E2HK 5M5WK 4Q4ZA 3S1MK 2WAQL 4XLPA 5IYBC 3GTMK 4MQ9A 4OIQA 2Y0SD 2R7ZK 3S1NC 4GZYA 2R92K 4Y7NC 3M4OC 2O5JA 5M5XK 2WB1L 1TWFK 4C2MK 1WCMC 3GTLC 3GTQK 1I3QC 4KN7A 5IP9K 4A3MC 2E2IC 3GTGC 5FLMK 4BBSK 2PPBA 3GTOC 4A93K 1TWAK 4C3IK 3S15K 1I50C 1K83C 1YNNA 3PO3K 4YG2A 5IYDC 1R9TC 4A3FK 2PMZD 2NVQC 5FJ8K 2JA8K 3S2DC 3S1RK 5D4DA 3HOZK 4BY7C 2YU9C 1Y1VK 3H0GC 2A68A 4MEXA 2NVYC 4XLNA 2VUMC 4A3DK 2BE5A 5IP7K 2NVXC 4A3CK 3GTJK 3M3YC 4A3JK 3S16K 1XPPA 1TWCC 4G7OA 5C44C 3HKZD 2A6HA 3CQZK 5M3MK 3HOYK 3S1MC 4A3LK 1TWHK 3I4NK 4A3EC 3S1QK 1TWGC 3HOVK 4MEYA 3H3VD 2R93K 4KN4A 4YFNA 2PA8L 1Y1WK 1I6HK 3GTMC 4AYBD 4BY1C 3K7AK 4BBRC 2E2JK 3HOWK 4QJVB 4LJZA 3RZOK 4X6AK 2CW0A 1TWFC 4C2MC 5M5YK 5IYCK 4Y52C 3GTQC 2JA5K 4BXXC 4JK1A 5IP9C 2Y0SL 5FLMC 2WB1D 3DXJA 4A3BC 3S17C 4A93C 1TWAC 1SFOK 4C3IC 3I4MC 3S15C 4C3HK 4QJVA 4XSXA 2NVTK 3GTKK 3HOUK 1YNJA 1HQMA 4A3FC 2JA7K 3EQLA 2JA8C 3S2HC 1WCMK 3HOZC 3S1RC 5IYBK 5M3FK 2B63K 3FKIK 1Y1VC 4A3DC 4A3KK 4Q5SA 5C3EK 3PO2K 5IP7C 3GTPK 3RZDK 2E2HC 4A3CC 3GTJC 3HOXK 4YFKA 2JA6K 4A3GK 3CQZC 4QIWL 1IW7A 2WAQD 4ZH4A 5C4JK 4A3LC 1TWHC 4C3JK 4BY7K 3I4NC 2R7ZC 2R92C 3HOVC 4A3IK 2R93C 1ZYRA 1I6HC 3S14K 5C4XK 4XSZA 4KMUA 3HKZL 2E2JC 3HOWC 5TMCA 4BBSC 3RZOC 4X6AC 5C44K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H3V L;  3WOD A;  5IYC C;  2JA5 C;  4AYB L;  2A6E A;  4A3E K;  1TWG K;  3S1N K;  3PO3 C;  4Y7N K;  3M4O K;  4OIR A;  4NOI A;  4LK1 A;  4G7H A;  1SFO C;  3HOU C;  2NVT C;  4C3H C;  4BBR K;  3GTK C;  1I3Q K;  4BY1 K;  4LLG A;  4OIO A;  3GTL K;  4A3M K;  2E2I K;  5TMF A;  3GTG K;  1I6V A;  2JA7 C;  3GTO K;  2PMZ L;  4Y52 K;  1SMY A;  1I50 K;  1K83 K;  4OIP A;  4A3J C;  3FKI C;  4YFX A;  4A3K C;  2B63 C;  3S16 C;  4BXX K;  5IYD K;  2O5I A;  5C3E C;  3PO2 C;  1R9T K;  2NVQ K;  4A3B K;  3GTP C;  3S17 K;  3RZD C;  3HOY C;  3I4M K;  3S2D K;  2YU9 K;  1BDF A;  4LK0 A;  3HOX C;  3S1Q C;  2JA6 C;  4A3G C;  2NVY K;  3H0G K;  2VUM K;  1Y1W C;  4G7Z A;  3S2H K;  2NVX K;  5C4J C;  3K7A C;  4C3J C;  3M3Y K;  4OIN A;  2A69 A;  1TWC K;  2PA8 D;  4QIW D;  4A3I C;  3S14 C;  5C4X C;  2E2H K;  5M5W K;  4Q4Z A;  3S1M K;  2WAQ L;  4XLP A;  5IYB C;  3GTM K;  4MQ9 A;  4OIQ A;  2Y0S D;  2R7Z K;  3S1N C;  4GZY A;  2R92 K;  4Y7N C;  3M4O C;  2O5J A;  5M5X K;  2WB1 L;  1TWF K;  4C2M K;  1WCM C;  3GTL C;  3GTQ K;  1I3Q C;  4KN7 A;  5IP9 K;  4A3M C;  2E2I C;  3GTG C;  5FLM K;  4BBS K;  2PPB A;  3GTO C;  4A93 K;  1TWA K;  4C3I K;  3S15 K;  1I50 C;  1K83 C;  1YNN A;  3PO3 K;  4YG2 A;  5IYD C;  1R9T C;  4A3F K;  2PMZ D;  2NVQ C;  5FJ8 K;  2JA8 K;  3S2D C;  3S1R K;  5D4D A;  3HOZ K;  4BY7 C;  2YU9 C;  1Y1V K;  3H0G C;  2A68 A;  4MEX A;  2NVY C;  4XLN A;  2VUM C;  4A3D K;  2BE5 A;  5IP7 K;  2NVX C;  4A3C K;  3GTJ K;  3M3Y C;  4A3J K;  3S16 K;  1XPP A;  1TWC C;  4G7O A;  5C44 C;  3HKZ D;  2A6H A;  3CQZ K;  5M3M K;  3HOY K;  3S1M C;  4A3L K;  1TWH K;  3I4N K;  4A3E C;  3S1Q K;  1TWG C;  3HOV K;  4MEY A;  3H3V D;  2R93 K;  4KN4 A;  4YFN A;  2PA8 L;  1Y1W K;  1I6H K;  3GTM C;  4AYB D;  4BY1 C;  3K7A K;  4BBR C;  2E2J K;  3HOW K;  4QJV B;  4LJZ A;  3RZO K;  4X6A K;  2CW0 A;  1TWF C;  4C2M C;  5M5Y K;  5IYC K;  4Y52 C;  3GTQ C;  2JA5 K;  4BXX C;  4JK1 A;  5IP9 C;  2Y0S L;  5FLM C;  2WB1 D;  3DXJ A;  4A3B C;  3S17 C;  4A93 C;  1TWA C;  1SFO K;  4C3I C;  3I4M C;  3S15 C;  4C3H K;  4QJV A;  4XSX A;  2NVT K;  3GTK K;  3HOU K;  1YNJ A;  1HQM A;  4A3F C;  2JA7 K;  3EQL A;  2JA8 C;  3S2H C;  1WCM K;  3HOZ C;  3S1R C;  5IYB K;  5M3F K;  2B63 K;  3FKI K;  1Y1V C;  4A3D C;  4A3K K;  4Q5S A;  5C3E K;  3PO2 K;  5IP7 C;  3GTP K;  3RZD K;  2E2H C;  4A3C C;  3GTJ C;  3HOX K;  4YFK A;  2JA6 K;  4A3G K;  3CQZ C;  4QIW L;  1IW7 A;  2WAQ D;  4ZH4 A;  5C4J K;  4A3L C;  1TWH C;  4C3J K;  4BY7 K;  3I4N C;  2R7Z C;  2R92 C;  3HOV C;  4A3I K;  2R93 C;  1ZYR A;  1I6H C;  3S14 K;  5C4X K;  4XSZ A;  4KMU A;  3HKZ L;  2E2J C;  3HOW C;  5TMC A;  4BBS C;  3RZO C;  4X6A C;  5C44 K; 
#chains in the Genus database with same CATH topology
 3H3V L;  2KWA A;  2PHC B;  4WF9 S;  3PO3 C;  4OIR A;  2NVT C;  4C3H C;  4GTC A;  1O27 A;  4BBR K;  2JA7 C;  1I50 K;  4RMF A;  3S16 C;  3GEH A;  2O5I A;  3ERE D;  1XXA A;  2YU9 K;  2V6S A;  1BGW A;  3A8I A;  2NVX K;  4OIN A;  5JVG S;  4A3I C;  4QIW D;  3S14 C;  1EFW A;  2WAQ L;  1K83 A;  4XLP A;  1ZXO A;  4BLA A;  3S1N C;  2R92 K;  5M5X K;  1TWF K;  4C2M K;  1WCM C;  2RH6 A;  3GTL C;  4KN7 A;  4A3M C;  4BBS K;  5FLM K;  4C3I K;  3S15 K;  1K83 C;  1YNN A;  5IOT A;  4KAW X;  2PMZ D;  2NVQ C;  1DCP A;  2JA8 K;  1TWH A;  1J6W A;  2A68 A;  2R7Z A;  2NVY C;  5DM6 S;  1F9N A;  5IP7 K;  3AH5 A;  2Y3P A;  4A3J K;  3GTQ A;  3HKZ D;  3S1M C;  4A3L K;  2R93 K;  1Y1W K;  4AYB D;  2E2J K;  4BBR C;  1Y1V A;  4QJV B;  4X6A K;  4KB2 A;  1EQR A;  4XCH A;  3PIO S;  3GTQ C;  1WIH A;  5IP9 C;  3FOE A;  5HL7 S;  2NVT K;  4C3H K;  4QJV A;  4XSX A;  2JA6 A;  3TFJ A;  3LAP A;  2JA7 K;  3HOZ C;  3S1R C;  4ILD A;  5M3F K;  1Y1V C;  4GTL A;  1USO A;  3CAG A;  4KB4 A;  4KC6 A;  4A3C C;  5IOR A;  2JH3 A;  1G51 A;  2R92 C;  1J6X A;  3OEP A;  4A3I K;  1VGX A;  3S14 K;  3MML B;  4G0U A;  1L0W A;  4XSZ A;  3HKZ L;  4GTB A;  3TTG A;  5HQH A;  3L4J A;  4BBS C;  1J98 A;  4GTD A;  5C44 K;  3WOD A;  3GTP A;  5IYC C;  3GSI A;  2KPU A;  4AYB L;  4A3E K;  3FOF A;  3S1N K;  2GSO A;  1IL2 A;  4NOI A;  3Q3Q A;  3GIR A;  4LK1 A;  4WJ3 M;  3HOU C;  3GTL K;  3VA7 A;  5JVH S;  2L5N A;  4LLG A;  4OIO A;  4A3M K;  3S0X A;  2XCR B;  4Y52 K;  1K83 K;  4A3J C;  4YFX A;  1X31 C;  3LPX A;  4BXX K;  1TWC A;  4A3B K;  2NVQ K;  3GTP C;  3AQO A;  3RZD C;  5DM7 S;  3I4M K;  1WSV A;  1BDF A;  4LK0 A;  3HOX C;  2NVY K;  1TWG A;  1Y1W C;  3ADA C;  4C3J C;  1WOR A;  2A69 A;  2PA8 D;  3GTG A;  5C4X C;  3BP8 C;  3S1M K;  4Q4Z A;  2CFA A;  4KAR A;  2V6T A;  4FM9 A;  2Y0S D;  1O29 A;  2R7Z K;  3H0G A;  2ZUF A;  4Y7N C;  2WB1 L;  4KAS A;  3GTQ K;  2ZJP S;  1V5V A;  5IP9 K;  3GTG C;  2PPB A;  1KQ4 A;  1WOP A;  2V6U A;  3V4G A;  4BLB A;  3S2D C;  3S1R K;  3HOZ K;  1Y1V K;  1O2A A;  3H0G C;  4XLN A;  4IO9 S;  4A3C K;  1VH2 A;  1IQ0 A;  5C44 C;  1WQG A;  1PJ5 A;  3HOY K;  3A8K A;  4A3E C;  4KN4 A;  2KQ1 A;  2PA8 L;  5JFE A;  3CF5 S;  2ZUE A;  1VLO A;  4LJZ A;  1EI6 A;  1F93 A;  1F7V A;  5IYC K;  4Y52 C;  3SZZ A;  4BXX C;  4JK1 A;  2Y0S L;  5EGH A;  4A3B C;  4A93 C;  3I4M C;  3HOU K;  4P5A A;  3LAJ A;  2KXY A;  4A3F C;  3EQL A;  1UV7 A;  1DCO A;  4A3D C;  1O28 A;  4Q5S A;  3GTP K;  3RZD K;  4FZB A;  3HOX K;  1BJT A;  4WCE S;  4QIW L;  1INN A;  1SFO A;  1TWH C;  4C3J K;  4BY7 K;  2R7Z C;  1XZP B;  3HOV C;  2RGR A;  1ZYR A;  1I6H C;  5C4X K;  4KMU A;  3FKI A;  5HL8 A;  3RZO C;  2XCO A;  1I50 A;  4WFA S;  1XZP A;  4DDQ A;  1TWG K;  3GDZ A;  4Y7N K;  4PAB A;  2D6F C;  1XXB A;  1SFO C;  4WJ4 A;  5TMF A;  3GTG K;  4KM8 A;  1I6V A;  4GFQ A;  2PMZ L;  1SMY A;  4OIP A;  3FKI C;  4A3K C;  1BS2 A;  5C3E C;  3PO2 C;  1JOE A;  3S17 K;  3HOY C;  3S2D K;  4WFB S;  3LYW A;  3H0G K;  2JA6 C;  4A3G C;  1ZVU A;  3GEE A;  1J6V A;  5C4J C;  1I3Q A;  4WFN S;  2E2I A;  3GTO A;  1O24 A;  1TWF A;  4KM9 A;  1R9T A;  5JVO A;  4OIQ A;  4LR2 A;  3FHZ A;  5E68 A;  4GZY A;  2O5J A;  3M4O C;  1WSR A;  2VUM A;  1O2B A;  2P5M A;  4M1X A;  1I3Q C;  4G0V A;  2E2I C;  3GTO C;  1VJE A;  3HXA A;  4G0W A;  4A93 K;  2E2H A;  1IS1 A;  4YG2 A;  5IYD C;  1R9T C;  4KAT A;  2CFA B;  4A3F K;  5FJ8 K;  3GTM A;  4BY7 C;  3DLL S;  4A3D K;  2VUM C;  1JVI A;  3OPF A;  3M3Y C;  3N0B A;  2P8T A;  1TWC C;  3G4C A;  2A6H A;  5M3M K;  1TWA A;  1TWH K;  3S1Q K;  1TWG C;  3HOV K;  4MEY A;  1ZQ1 C;  4YFN A;  1DCH A;  3G4A A;  1I6H K;  3GTM C;  4WIL A;  3K7A K;  1VRQ C;  5CHP A;  3RZO K;  3T01 A;  2CW0 A;  5M5Y K;  4LOW A;  3GTJ A;  3AQP A;  1WQF A;  3JST A;  3DXJ A;  3S17 C;  1JQW A;  3CQZ A;  1TWA C;  4GTA A;  4O2D A;  3N0C A;  1SFO K;  1YNJ A;  1HQM A;  1WOO A;  1WQH A;  3T02 A;  3FKI K;  3L4K A;  4A3K K;  3GEI A;  5C3E K;  3PO2 K;  3GTJ C;  2JA5 A;  4IOC S;  3AD9 C;  2JA6 K;  4A3G K;  3CQZ C;  5EGE A;  2GSU A;  5IOS A;  1IW7 A;  5C4J K;  4ZH4 A;  1HI9 A;  3GTK A;  3I4N C;  2L3U A;  4U67 S;  1WCM A;  3GTL A;  3HOW C;  3BUE A;  2B63 A;  4P5B A;  1ZBS A;  4LQY A;  1EK8 A;  2JA5 C;  3N3Y A;  4GT9 A;  2A6E A;  3M4O K;  4G7H A;  4BY1 K;  3GTK C;  1I3Q K;  4KMH A;  2E2I K;  2NVY A;  3GTO K;  1RU0 A;  3AD7 C;  4GTE A;  2B63 C;  5IYD K;  1R9T K;  1FEU A;  4BKW A;  3QX3 A;  3S1Q C;  2VUM K;  1WOS A;  2FQT A;  3AD8 C;  4G7Z A;  3TFH A;  3S2H K;  3K7A C;  3M3Y K;  1TWC K;  2ZFZ A;  4AH6 A;  2GSN A;  2E2H K;  1IE0 A;  5M5W K;  5IYB C;  1XZQ B;  1B4A A;  3PIP S;  3GTM K;  4MQ9 A;  3ORE A;  4KDD A;  3T00 A;  2YU9 A;  1DD5 A;  1F7U A;  3BP3 A;  2GAG C;  2NVX A;  1XZQ A;  2W7V A;  1EH1 A;  1TWA K;  1I50 C;  1GE9 A;  1PJ7 A;  4P9S A;  2GAH C;  5IOQ A;  1B4B A;  3PO3 K;  5TJ3 A;  5L46 A;  4IOA S;  1ISE A;  1AB4 A;  5D4D A;  2YU9 C;  4MEX A;  2ZJR S;  2R92 A;  2BE5 A;  2NVX C;  2FQO A;  3GTJ K;  3S16 K;  1XPP A;  3A8J A;  4G7O A;  4GTF A;  3CQZ K;  3TFI A;  1USM A;  1O26 A;  1YCL A;  3I4N K;  2ZJQ S;  3H3V D;  4PAA A;  5CJ9 A;  3IPJ A;  4BY1 C;  3HOW K;  2EBB A;  1IBA A;  1O25 A;  1TWF C;  4C2M C;  1C0A A;  2JA5 K;  5FLM C;  2WB1 D;  4C45 A;  4C3I C;  3S15 C;  1YX2 A;  3GTK K;  3SZY A;  2R93 A;  2XCQ A;  1Y1W A;  2JA8 C;  3S2H C;  1WCM K;  4KMA A;  1O2F B;  2B63 K;  1PJ6 A;  5IP7 C;  1XXC A;  2E2H C;  4YFK A;  2WAQ D;  4A3L C;  2R93 C;  2JA7 A;  3NUH A;  2E2J C;  4KMD A;  4J3N A;  5TMC A;  5IYB K;  4X6A C; 
#chains in the Genus database with same CATH homology
 3H3V L;  3WOD A;  5IYC C;  2JA5 C;  4AYB L;  2A6E A;  4A3E K;  1TWG K;  3S1N K;  3PO3 C;  4Y7N K;  3M4O K;  4OIR A;  4NOI A;  4LK1 A;  4G7H A;  1SFO C;  3HOU C;  2NVT C;  4C3H C;  4BBR K;  3GTK C;  1I3Q K;  4BY1 K;  4LLG A;  4OIO A;  3GTL K;  4A3M K;  2E2I K;  5TMF A;  3GTG K;  1I6V A;  2JA7 C;  3GTO K;  2PMZ L;  4Y52 K;  1SMY A;  1I50 K;  1K83 K;  4OIP A;  4A3J C;  3FKI C;  4YFX A;  4A3K C;  2B63 C;  3S16 C;  4BXX K;  5IYD K;  2O5I A;  5C3E C;  3PO2 C;  1R9T K;  2NVQ K;  4A3B K;  3GTP C;  3S17 K;  3RZD C;  3HOY C;  3I4M K;  3S2D K;  2YU9 K;  1BDF A;  4LK0 A;  3HOX C;  3S1Q C;  2JA6 C;  4A3G C;  2NVY K;  3H0G K;  2VUM K;  1Y1W C;  4G7Z A;  3S2H K;  2NVX K;  5C4J C;  3K7A C;  4C3J C;  3M3Y K;  4OIN A;  2A69 A;  1TWC K;  2PA8 D;  4QIW D;  4A3I C;  3S14 C;  5C4X C;  2E2H K;  5M5W K;  4Q4Z A;  3S1M K;  2WAQ L;  4XLP A;  5IYB C;  3GTM K;  4MQ9 A;  4OIQ A;  2Y0S D;  2R7Z K;  3S1N C;  4GZY A;  2R92 K;  4Y7N C;  3M4O C;  2O5J A;  5M5X K;  2WB1 L;  1TWF K;  4C2M K;  1WCM C;  3GTL C;  3GTQ K;  1I3Q C;  4KN7 A;  5IP9 K;  4A3M C;  2E2I C;  3GTG C;  5FLM K;  4BBS K;  2PPB A;  3GTO C;  4A93 K;  1TWA K;  4C3I K;  3S15 K;  1I50 C;  1K83 C;  1YNN A;  3PO3 K;  4YG2 A;  5IYD C;  1R9T C;  4A3F K;  2PMZ D;  2NVQ C;  5FJ8 K;  2JA8 K;  3S2D C;  3S1R K;  5D4D A;  3HOZ K;  4BY7 C;  2YU9 C;  1Y1V K;  3H0G C;  2A68 A;  4MEX A;  2NVY C;  4XLN A;  2VUM C;  4A3D K;  2BE5 A;  5IP7 K;  2NVX C;  4A3C K;  3GTJ K;  3M3Y C;  4A3J K;  3S16 K;  1XPP A;  1TWC C;  4G7O A;  5C44 C;  3HKZ D;  2A6H A;  3CQZ K;  5M3M K;  3HOY K;  3S1M C;  4A3L K;  1TWH K;  3I4N K;  4A3E C;  3S1Q K;  1TWG C;  3HOV K;  4MEY A;  3H3V D;  2R93 K;  4KN4 A;  4YFN A;  2PA8 L;  1Y1W K;  1I6H K;  3GTM C;  4AYB D;  4BY1 C;  3K7A K;  4BBR C;  2E2J K;  3HOW K;  4QJV B;  4LJZ A;  3RZO K;  4X6A K;  2CW0 A;  1TWF C;  4C2M C;  5M5Y K;  5IYC K;  4Y52 C;  3GTQ C;  2JA5 K;  4BXX C;  4JK1 A;  5IP9 C;  2Y0S L;  5FLM C;  2WB1 D;  3DXJ A;  4A3B C;  3S17 C;  4A93 C;  1TWA C;  1SFO K;  4C3I C;  3I4M C;  3S15 C;  4C3H K;  4QJV A;  4XSX A;  2NVT K;  3GTK K;  3HOU K;  1YNJ A;  1HQM A;  4A3F C;  2JA7 K;  3EQL A;  2JA8 C;  3S2H C;  1WCM K;  3HOZ C;  3S1R C;  5IYB K;  5M3F K;  2B63 K;  3FKI K;  1Y1V C;  4A3D C;  4A3K K;  4Q5S A;  5C3E K;  3PO2 K;  5IP7 C;  3GTP K;  3RZD K;  2E2H C;  4A3C C;  3GTJ C;  3HOX K;  4YFK A;  2JA6 K;  4A3G K;  3CQZ C;  4QIW L;  1IW7 A;  2WAQ D;  4ZH4 A;  5C4J K;  4A3L C;  1TWH C;  4C3J K;  4BY7 K;  3I4N C;  2R7Z C;  2R92 C;  3HOV C;  4A3I K;  2R93 C;  1ZYR A;  1I6H C;  3S14 K;  5C4X K;  4XSZ A;  4KMU A;  3HKZ L;  2E2J C;  3HOW C;  5TMC A;  4BBS C;  3RZO C;  4X6A C;  5C44 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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